BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 7778f80e2a3ff309629a02fe315a8727.SwissProt.fasta
20 sequences; 10,382 total letters
Query= ACIAD3365
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
A4XQR9 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 349 1e-118
Q88N81 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 343 3e-116
Q8E9P3 UDP-N-acetylmuramyl-tripeptide synthetase [Shewanella onei... 340 4e-115
Q59650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 340 5e-115
Q87WY0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 328 2e-110
A4IM04 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 322 4e-108
Q9X6N4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 320 2e-107
Q5L0Y0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 320 3e-107
Q31N55 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 320 4e-107
Q9JSZ0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 314 4e-105
Q819Q0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 296 3e-98
Q03523 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 277 9e-91
P22188 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 270 9e-88
Q9WY79 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligas... 252 3e-81
O86491 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase... 249 6e-80
Q2FZP6 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase... 249 6e-80
O85298 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 235 2e-74
Q9RNM2 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 213 4e-66
F4I3P9 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 206 1e-61
K7WCC7 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopime... 166 2e-47
>A4XQR9 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Pseudomonas mendocina (strain ymp)]
Length=487
Score = 349 bits (895), Expect = 1e-118
Identities = 204/465 (44%), Positives = 287/465 (62%), Gaps = 15/465 (3%)
Query 28 LDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGIISEQ----PLGLEREWVCADV 83
LDSR ++ LF+A+ Q + I A+A+GA + E P+ E V V
Sbjct 23 LDSRKVRPGDLFLAVPGTQQDGRVHI--ADAVARGAAAVAFEAEGAAPMHAESA-VLVPV 79
Query 84 RHRMGQWQKNYLQ-KTEPVNAARIIAVTGTNGKTTISRLVAELLTLQQQRCAVMGTTGNG 142
+ GQ + EP A +I VTGTNGKT++S+L+A+ L L +RC ++GT G G
Sbjct 80 KGLAGQLSAIAGRFYGEPSRALHLIGVTGTNGKTSVSQLLAQALDLLGERCGIVGTLGTG 139
Query 143 ILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLNGCDIEIAVYSNL 202
L HTT D + +Q+ L + GAR ++E SSHGL+QGR+ + ++AV++NL
Sbjct 140 FHGALEQGKHTTPDPVGVQATLASLKQAGARAVAMEVSSHGLDQGRVAALEFDVAVFTNL 199
Query 203 SRDHLDYHGTLAAYAEAKSRLFAFKSLKVAVINQDDAYAELMKAVAAQNPAQPQILTYSL 262
SRDHLDYHG++ AY AK++LFA+ +L+ VIN DDA+ + AQ +++ YSL
Sbjct 200 SRDHLDYHGSMEAYGAAKAKLFAWPNLRCRVINLDDAFGREL----AQQAHDSRLIGYSL 255
Query 263 TQ-SADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLIAALIAAEQAGFALE 321
+ SA E Q+ G R LV P+GE ++ S LLG FN+ NL+A + A + L+
Sbjct 256 SDASAFLYCSEAQFDDHGVRARLVTPRGEGVLRSNLLGRFNLSNLLAVVGALLGMDYGLD 315
Query 322 ELVKTVPQLIGAPGRMQVIRDQDR-LFVVDYAHTPDALNQVLKTLRRHVQQQLWAVFGCG 380
E++K +PQL G GRMQ + D+ L VVDYAHTPDAL +VL+ +R HVQ +L +FGCG
Sbjct 316 EILKVLPQLQGPAGRMQRLGGGDKPLVVVDYAHTPDALEKVLEAMRPHVQGRLVCLFGCG 375
Query 381 GDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGIDFSHHQIYEIHDRRE 440
GDRDRGKRPLM A A+ V +T DNPR+E+P QI AD++ G + Q+ IH R +
Sbjct 376 GDRDRGKRPLMAAVAERLADVVWVTDDNPRSEDPAQIVADIRAGF-CAPEQVQFIHGRGD 434
Query 441 AIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDDVTEVQSAI 485
AI ++ A+A D++V+AGKGHE+YQEI GVRH F D+ E A+
Sbjct 435 AIARLIAQAEAADVLVLAGKGHEDYQEITGVRHPFSDLIEANEAL 479
>Q88N81 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Pseudomonas putida (strain ATCC 47054 / DSM
6125 / CFBP 8728 / NCIMB 11950 / KT2440)]
Length=496
Score = 343 bits (880), Expect = 3e-116
Identities = 201/484 (42%), Positives = 289/484 (60%), Gaps = 27/484 (6%)
Query 19 RDQPFQGFCLDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGIISEQ-------- 70
RD + LDSR ++ LF+A+ + I ALA+GA + E+
Sbjct 15 RDPLIRELTLDSRSVRPGDLFLAVPGAKVDGREHI--ADALARGAAAVAYEEQGANVLPL 72
Query 71 ---PLGLEREWVCADVRHRMGQWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLT 127
PL + + + A + G++ EP ++ VTGTNGKT++++LVA+ L
Sbjct 73 TDVPL-IPVKGLIAQLSDIAGRFYG------EPSRQLNLVGVTGTNGKTSVTQLVAQALD 125
Query 128 LQQQRCAVMGTTGNGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQG 187
L QRC ++GT G G L TT D + +QS L+ K GAR ++E SSH LEQG
Sbjct 126 LLGQRCGLIGTLGTGFYGELQSGRLTTPDPIAVQSTLNDLKKGGARAVAMEVSSHALEQG 185
Query 188 RLNGCDIEIAVYSNLSRDHLDYHGTLAAYAEAKSRLFAFKSLKVAVINQDDAYAELMKAV 247
R+ + +IAV +NLSRDHLDYHG++ AY AK++LFA+ SL+ V+N DD + + A
Sbjct 186 RVAALEFDIAVMTNLSRDHLDYHGSMEAYEAAKAKLFAWPSLRCQVVNLDDDFGRRLAAD 245
Query 248 AAQNPA----QPQILTYSL-TQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFN 302
A+ P+ + ++L+YSL + A +E +S G R LV +GE ++ S LLG FN
Sbjct 246 FARRPSVDHIETRLLSYSLESPEASLFCREAVFSDDGVRATLVTAQGERILRSQLLGRFN 305
Query 303 VENLIAALIAAEQAGFALEELVKTVPQLIGAPGRMQVIRDQDR-LFVVDYAHTPDALNQV 361
+ N++AA+ +AL+E++K PQL G GRMQ + D+ L VVDYAHTPDAL +V
Sbjct 306 LSNMLAAVATLLALDYALDEILKVTPQLQGPVGRMQRLGGGDKPLVVVDYAHTPDALEKV 365
Query 362 LKTLRRHVQQQLWAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADM 421
L+ LR H +L +FGCGGDRDRGKRPLM + A A+ V++T DNPRTE+P +IF D+
Sbjct 366 LEALRPHAHGKLLCLFGCGGDRDRGKRPLMAEVAERLADRVLVTDDNPRTEDPSRIFDDI 425
Query 422 KTGIDFSHHQIYEIHDRREAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDDVTEV 481
+ G + + R EAI +++ A A D++V+AGKGHE+YQEI G RH F D+TE
Sbjct 426 RPGFT-RPDDVEFVAGRGEAIAHLIATAAANDVIVLAGKGHEDYQEINGERHDFSDLTEA 484
Query 482 QSAI 485
+ A+
Sbjct 485 EKAL 488
>Q8E9P3 UDP-N-acetylmuramyl-tripeptide synthetase [Shewanella
oneidensis (strain MR-1)]
Length=492
Score = 340 bits (872), Expect = 4e-115
Identities = 195/468 (42%), Positives = 273/468 (58%), Gaps = 13/468 (3%)
Query 20 DQPFQGFCLDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGII------SEQPLG 73
+Q F LDSR I++ +F+AL + R F + ALAQGA ++ EQ
Sbjct 17 EQTFLDLTLDSRAIRRGDVFLALPGHKVDG--RQFIDKALAQGATAVLVHTDNPQEQGKV 74
Query 74 LEREWVCADVRHRMGQWQKNYLQKTEPV---NAARIIAVTGTNGKTTISRLVAELLTLQQ 130
+ E + + + PV +A I+ +TGTNGKT+ S+L A+L+TL
Sbjct 75 IVAEQGVQIYFYELAKHVSAVAAVRYPVIQGHAMGIVGITGTNGKTSTSQLCAQLVTLLS 134
Query 131 QRCAVMGTTGNGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLN 190
+ AVMGT GNG+ L S +TT DA+ L LH++ +G ++E SSHGL QGR++
Sbjct 135 GKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFANKGVNTCAMEVSSHGLVQGRVD 194
Query 191 GCDIEIAVYSNLSRDHLDYHGTLAAYAEAKSRLFAFKSLKVAVINQDDAYAELMKAVAAQ 250
++AV++NL+RDHLDYHG + YA AK LF F SL+ ++N DD A
Sbjct 195 AVPFDVAVFTNLTRDHLDYHGDMENYAAAKQMLFRFDSLRHGLLNLDDPIGGAWLAELKN 254
Query 251 NPAQPQILTYSLTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLIAAL 310
PA+ + ++A + K ++++ G + LV P+GE + SPLLG FN+ NL+AAL
Sbjct 255 VPAKIWGFSIEAHKAAAFYTKNVRFNDQGVQATLVWPEGEIDISSPLLGAFNLSNLLAAL 314
Query 311 IAAEQAGFALEELVKTVPQLIGAPGRMQVIRDQDRL-FVVDYAHTPDALNQVLKTLRRHV 369
A G + L VP L+ GRM+ D + VVDYAHTPDA+ Q L LRRH
Sbjct 315 SALYLQGMDMRALAAKVPYLVPVAGRMERFTTADNITLVVDYAHTPDAIEQALNALRRHC 374
Query 370 QQQLWAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGIDFSH 429
LW VFGCGGDRD+GKRPLM QAA A+ +++TSDN R+E+P QI D+ G+
Sbjct 375 AGVLWCVFGCGGDRDKGKRPLMGQAAEQFADRIMVTSDNARSEDPNQIITDIIQGLTHPE 434
Query 430 HQIYEIHDRREAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDD 477
+ E+ DR AIK VV A++GD++++AGKGHE YQE GVRH +D+
Sbjct 435 RALTEV-DRVAAIKQVVAQAKSGDVILLAGKGHETYQEAAGVRHDYDE 481
>Q59650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Pseudomonas aeruginosa (strain ATCC 15692 /
DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101
/ PAO1)]
Length=487
Score = 340 bits (871), Expect = 5e-115
Identities = 201/480 (42%), Positives = 287/480 (60%), Gaps = 27/480 (6%)
Query 19 RDQPFQGFCLDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGII----------- 67
RD + LDSR ++ LF+A+ Q + I ALA+GA +
Sbjct 14 RDLLIRELTLDSRGVRPGDLFLAVPGGRQDGRAHI--ADALAKGAAAVAYEAEGAGELPP 71
Query 68 SEQPLGLEREWVCADVRHRMGQWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLT 127
S+ PL + + + A + G++ EP +I VTGTNGKT++S+LVA+ L
Sbjct 72 SDAPL-IAVKGLAAQLSAVAGRFYG------EPSRGLDLIGVTGTNGKTSVSQLVAQALD 124
Query 128 LQQQRCAVMGTTGNGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQG 187
L +RC ++GT G G L HTT D L +Q+ L + GAR ++E SSHGL+QG
Sbjct 125 LLGERCGIVGTLGTGFYGALESGRHTTPDPLAVQATLATLKQAGARAVAMEVSSHGLDQG 184
Query 188 RLNGCDIEIAVYSNLSRDHLDYHGTLAAYAEAKSRLFAFKSLKVAVINQDDAYAELMKAV 247
R+ +IAV++NLSRDHLDYHG++ AYA AK++LFA+ L+ VIN DD + +
Sbjct 185 RVAALGFDIAVFTNLSRDHLDYHGSMEAYAAAKAKLFAWPGLRCRVINLDDDFGRRL--- 241
Query 248 AAQNPAQPQILTYSLTQSADY-SVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENL 306
A +++TYSLT S+ + +E ++ +G LV P GE L+ SPLLG FN+ NL
Sbjct 242 -AGEEQDSELITYSLTDSSAFLYCREARFGDAGIEAALVTPHGEGLLRSPLLGRFNLSNL 300
Query 307 IAALIAAEQAGFALEELVKTVPQLIGAPGRMQVIRDQDR-LFVVDYAHTPDALNQVLKTL 365
+AA+ A G+ L ++++T+PQL G GRMQ + D+ L VVDYAHTPDAL +VL+ L
Sbjct 301 LAAVGALLGLGYPLGDILRTLPQLQGPVGRMQRLGGGDKPLVVVDYAHTPDALEKVLEAL 360
Query 366 RRHVQQQLWAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGI 425
R H +L +FGCGGDRD GKRPLM A A+ V++T DNPRTE I AD++ G
Sbjct 361 RPHAAARLLCLFGCGGDRDAGKRPLMAAIAERLADEVLVTDDNPRTEASAAIIADIRKGF 420
Query 426 DFSHHQIYEIHDRREAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDDVTEVQSAI 485
+ ++ + R EAI +++ A D+V++AGKGHE+YQEI GVRH F D+ + + A+
Sbjct 421 -AAADKVTFLPSRGEAIAHLIASAAVDDVVLLAGKGHEDYQEIDGVRHPFSDIEQAERAL 479
>Q87WY0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Pseudomonas syringae pv. tomato (strain ATCC
BAA-871 / DC3000)]
Length=487
Score = 328 bits (841), Expect = 2e-110
Identities = 193/480 (40%), Positives = 284/480 (59%), Gaps = 27/480 (6%)
Query 19 RDQPFQGFCLDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGI-----------I 67
RD + LDSR ++ LF+A+ + I AL +GA + I
Sbjct 14 RDPLIRELTLDSRNVRPGDLFLAVPGIKVDGRAHI--ADALKRGAAAVAYEVEGATVLPI 71
Query 68 SEQPLGLEREWVCADVRHRMGQWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLT 127
++ PL + + + A + G++ +P + ++ VTGTNGKT++++LVA+ L
Sbjct 72 TDVPL-IPVKGLAAQLSDVAGRFYG------DPSRSLNLVGVTGTNGKTSVTQLVAQALD 124
Query 128 LQQQRCAVMGTTGNGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQG 187
QRC ++GT G G L HTT D + +Q+AL K GAR ++E SSHGL+QG
Sbjct 125 ALGQRCGIVGTLGTGFYGALQSGRHTTPDPIAVQAALTDLRKAGARAVAMEVSSHGLDQG 184
Query 188 RLNGCDIEIAVYSNLSRDHLDYHGTLAAYAEAKSRLFAFKSLKVAVINQDDAYAELMKAV 247
R ++AV +NLSRDHLDYHGT+ AYA AK++LFA+ +L VIN DD + + +
Sbjct 185 RATALAFDVAVLTNLSRDHLDYHGTMEAYAAAKAKLFAWPNLNCRVINLDDDFGRELAGL 244
Query 248 AAQNPAQPQILTYS-LTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENL 306
++ +++TYS L SA ++ ++ G R LV P+GE+ + S LLG FN+ N+
Sbjct 245 KQES----RLITYSQLDSSAYLYCRDAKFDDDGVRATLVTPQGEHFLRSSLLGRFNLSNV 300
Query 307 IAALIAAEQAGFALEELVKTVPQLIGAPGRMQVIRDQDR-LFVVDYAHTPDALNQVLKTL 365
+AA+ A +AL+E++K +P+L G GRMQ + D+ L VVDYAHTPDAL +VL+ L
Sbjct 301 LAAVGALLGLDYALDEILKVLPKLEGPVGRMQRLGGADKPLVVVDYAHTPDALEKVLEAL 360
Query 366 RRHVQQQLWAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGI 425
R H + +L +FGCGGDRDRGKRPLM + A+ V +T DNPR+E P IF D++ G
Sbjct 361 RPHAKGRLLCLFGCGGDRDRGKRPLMAEVVERLADGVWVTDDNPRSEAPTNIFDDIRPGF 420
Query 426 DFSHHQIYEIHDRREAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDDVTEVQSAI 485
+ ++ I R +AI ++ A D+VV+AGKGHE+YQEI G R F D+ E +A+
Sbjct 421 -VTADKVRFIEGRGQAIAELIASATVDDVVVLAGKGHEDYQEIDGKRQPFSDLEEAATAL 479
>A4IM04 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Geobacillus thermodenitrificans (strain NG80-2)]
Length=489
Score = 322 bits (825), Expect = 4e-108
Identities = 178/467 (38%), Positives = 271/467 (58%), Gaps = 18/467 (4%)
Query 28 LDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGIISEQPLGLEREWVCA-DVRHR 86
+DSR++ LF + ++ FAE A+ +GA+ I++E+PL + V D R
Sbjct 28 MDSRHVTPGSLFFCVKGFTVDGHD--FAEQAVERGAVAIVAERPLSVNVPVVVVPDSRRA 85
Query 87 MGQWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLTLQQQRCAVMGTTGNGILPH 146
M + +P + +I VTGTNGKTT + ++ ++ ++ ++GT G I
Sbjct 86 MAILADAFYG--QPTHRLHLIGVTGTNGKTTTTHIIEQVARKAGKKIGLIGTVGTKIGDR 143
Query 147 LNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLNGCDIEIAVYSNLSRDH 206
P+ +TT ++L LQ Q V EG F ++E SSH L QGR++GCD ++AV++NL++DH
Sbjct 144 SYPAVNTTPESLVLQRTFKQMVDEGVEFVTMEVSSHALHQGRVHGCDYDVAVFTNLTQDH 203
Query 207 LDYHGTLAAYAEAKSRLFAF-------KSLKVAVINQDDAYAELMKAVAAQNPAQPQILT 259
LDYHGT+ Y AK LFA + K AV+N DD ++ K + A I+T
Sbjct 204 LDYHGTMEEYRNAKGLLFAQLGNRYDERRPKFAVLNHDDPVSQYYKHMTAA-----PIIT 258
Query 260 YSLTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLIAALIAAEQAGFA 319
Y + + +D ++++ + G F L P G +E+ L+G FNV NL+AA A +GF+
Sbjct 259 YGIKEKSDVMAEQIEMTPGGMAFQLCTPHGTMAIETKLVGLFNVYNLLAATAACLASGFS 318
Query 320 LEELVKTVPQLIGAPGRMQVIRD-QDRLFVVDYAHTPDALNQVLKTLRRHVQQQLWAVFG 378
L + + + + PGR + + + Q+ +VDYAHTPD++ LKT+R+ ++ ++ V G
Sbjct 319 LATIAEALANVSPVPGRFETVDEGQNFTVIVDYAHTPDSVENALKTVRQFAKRNVYVVIG 378
Query 379 CGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGIDFSHHQIYEIHDR 438
CGGDRDR KRPLM QAA+ A+ + TSDNPR+E+P+QI DM+ G+ I DR
Sbjct 379 CGGDRDRTKRPLMAQAAVRYADVAVFTSDNPRSEDPRQILRDMEAGVSAGDGTYVTIPDR 438
Query 439 REAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDDVTEVQSAI 485
EAI+Y + AQ GD+V+IAGKGHE YQ I FDD ++A+
Sbjct 439 EEAIRYAIGQAQEGDVVLIAGKGHETYQIIGDDVIDFDDRAVARAAV 485
>Q9X6N4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Vibrio cholerae serotype O1 (strain ATCC 39315
/ El Tor Inaba N16961)]
Length=495
Score = 320 bits (821), Expect = 2e-107
Identities = 198/475 (42%), Positives = 269/475 (57%), Gaps = 26/475 (5%)
Query 28 LDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGIISEQPLGLEREWVCADVRH-- 85
LDSR I+ F+A+ ++ R F + A+AQGA +++E WV + R
Sbjct 32 LDSRLIKSGDTFVAIQGHAVDG--RQFIDKAIAQGANLVLAEADAQHLNGWV--EYRAGV 87
Query 86 ------RMGQWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLTLQQQRCAVMGTT 139
+GQ + + ++I VTGTNGKTTI++L+A+ L L + AVMGTT
Sbjct 88 PVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMGTT 147
Query 140 GNGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLNGCDIEIAVY 199
GNG L L P+ +TT +ALQ+Q+ L + GA++ +LE SSHGL QGR+ V+
Sbjct 148 GNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFVAGVF 207
Query 200 SNLSRDHLDYHGTLAAYAEAKSRLFAFKSLKVAVINQDDAYAELMKAVAAQNPAQ-PQIL 258
SNLSRDHLDYHGT+ AYA AK LF+ + + A+IN DD AV AQ Q PQ +
Sbjct 208 SNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNAIINVDD-------AVGAQWVKQLPQAI 260
Query 259 TYSLTQSADYS----VKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLIAALIAAE 314
SL + + +E+ Y+ SG GE + +PL+G FN NL+ AL
Sbjct 261 GVSLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLL 320
Query 315 QAGFALEELVKTVPQLIGAPGRMQVI-RDQDRLFVVDYAHTPDALNQVLKTLRRHVQQQL 373
GF L+ T P+L GRM++ R+Q VVDYAHTPDAL + L+ LR H QL
Sbjct 321 SLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVDYAHTPDALEKALRALRVHCAGQL 380
Query 374 WAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGIDFSHHQIY 433
WA+ GCGGDRDRGKRP+M A A+ VILT DNPR+E+P+ I ADM G+ +
Sbjct 381 WAIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQAIVADMVAGLTYPERAHI 440
Query 434 EIHDRREAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDDVTEVQSAINTQ 488
E H R +A Y +QHA A DI+++AGKGHE+YQ + + D Q + Q
Sbjct 441 E-HHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHYSDRETAQQLLELQ 494
>Q5L0Y0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Geobacillus kaustophilus (strain HTA426)]
Length=489
Score = 320 bits (819), Expect = 3e-107
Identities = 180/467 (39%), Positives = 270/467 (58%), Gaps = 18/467 (4%)
Query 28 LDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGIISEQPLGLEREWVC-ADVRHR 86
+DSR + LF L ++ FAE A+A+GA I++E+PL ++ V +D R
Sbjct 28 MDSRRVASGSLFFCLKGFTVDGHD--FAEEAVARGAAAIVAERPLSVDVPVVLVSDSRRA 85
Query 87 MGQWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLTLQQQRCAVMGTTGNGILPH 146
M + + P + +I VTGTNGKTT + ++ ++ ++ ++GT +
Sbjct 86 MAILADAFYGR--PTHRLHLIGVTGTNGKTTTTSIIEQIARKTGKKTGLIGTVHIKVGDR 143
Query 147 LNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLNGCDIEIAVYSNLSRDH 206
P+ +TT ++L LQ Q V EG F ++E SSH L QGR++GCD ++AV++NL++DH
Sbjct 144 SYPAANTTPESLILQRTFKQMVDEGVEFVAMEVSSHALHQGRVHGCDYDVAVFTNLTQDH 203
Query 207 LDYHGTLAAYAEAKSRLFAF-------KSLKVAVINQDDAYAELMKAVAAQNPAQPQILT 259
LDYHGT+ Y AK LFA + K AV+N DD ++ K + A I+T
Sbjct 204 LDYHGTMEEYRNAKGLLFAQLGNRYDERRPKFAVLNHDDPVSQYYKHMTAA-----PIVT 258
Query 260 YSLTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLIAALIAAEQAGFA 319
Y + + +D ++++ + G F L P G VE+ L+G FNV N++AA A +GF+
Sbjct 259 YGMREKSDVMAEQIRMTAGGMAFRLCTPHGSAAVETKLVGSFNVYNILAAAAACLASGFS 318
Query 320 LEELVKTVPQLIGAPGRMQVIRD-QDRLFVVDYAHTPDALNQVLKTLRRHVQQQLWAVFG 378
LE + + + PGR + + + Q+ +VDYAHTPD+L LKT+R+ ++ ++ V G
Sbjct 319 LETIAAALADVEPVPGRFETVDEGQNFTIIVDYAHTPDSLENALKTVRQLAKRNVYVVIG 378
Query 379 CGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGIDFSHHQIYEIHDR 438
CGGDRD KRPLM Q A+ A+ I TSDNPR+E+PKQI DM+ G+ + I DR
Sbjct 379 CGGDRDPSKRPLMAQVAVRYADVAIFTSDNPRSEDPKQILRDMEAGVSAEIGKHVTIPDR 438
Query 439 REAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDDVTEVQSAI 485
EAI+Y + AQ GD+V+IAGKGHE YQ I FDD ++A+
Sbjct 439 EEAIRYAIGQAQEGDVVLIAGKGHETYQIIGNDVIEFDDRAVARAAV 485
>Q31N55 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Synechococcus elongatus (strain ATCC 33912
/ PCC 7942 / FACHB-805)]
Length=497
Score = 320 bits (819), Expect = 4e-107
Identities = 193/477 (40%), Positives = 273/477 (57%), Gaps = 19/477 (4%)
Query 20 DQPFQGFCLDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGII------SEQPLG 73
D G DSR Q LF+ + +Q + + + E A+A GA+ +I +++PL
Sbjct 23 DLAITGLQTDSRRCQPGDLFLGMPG-TQVDGGQFWPE-AIAAGAVAVIVTPTALAQRPLS 80
Query 74 LEREWVCADVRHRMGQWQKNYLQK--TEPVNAARIIAVTGTNGKTTISRLVAELLTLQQQ 131
E C + +M +P ++I VTGTNGKTT + LV L
Sbjct 81 ANPE-ACLILSDQMPVTAGAIAAAFYNQPAQTLKLIGVTGTNGKTTTTHLVEHFLNAADT 139
Query 132 RCAVMGTTGNGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLNG 191
+ A++GT N + + HTT A LQ+ L V G + A +E SSH L+QGR+NG
Sbjct 140 KTALLGTLYNRWPGYSEVAQHTTPFATDLQAQLATAVDAGCQAAVMEVSSHALDQGRVNG 199
Query 192 CDIEIAVYSNLSRDHLDYHGTLAAYAEAKSRLFAFKSLK-VAVINQDDAYAELMKAVAAQ 250
C ++AV++NL++DHLDYHGT+ AY AK+RLFA L+ AVIN DDAY + + +
Sbjct 200 CGFDVAVFTNLTQDHLDYHGTMEAYFAAKARLFAPPYLRGKAVINADDAYGQRLITMTPP 259
Query 251 NPAQPQILTYSLTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLIAAL 310
Q LTYS+ +AD+ +LQY +G + P G + SPL+G FN+ NL+ A+
Sbjct 260 G----QCLTYSVVGTADFCTTDLQYGPTGVEGTIKTPDGAFPFRSPLVGQFNLANLLGAI 315
Query 311 IAAEQAGFALEELVKTVPQLIGAPGRMQ--VIRDQDRLFVVDYAHTPDALNQVLKTLRRH 368
A G +E ++ VP +G PGRM+ V +D D +VDYAHTPD+L +LK R
Sbjct 316 AAGWTLGLPIETMLAVVPDFVGVPGRMERVVGQDSDPTVIVDYAHTPDSLENLLKAARPF 375
Query 369 VQQQLWAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGIDFS 428
+Q +L VFGCGGDRDR KRPLM + A A+ VI+TSDNPRTE+P+QI AD+ GI +
Sbjct 376 IQGELICVFGCGGDRDRTKRPLMGEIAARLADRVIITSDNPRTEDPRQILADIVAGIPAA 435
Query 429 HHQIYEIHDRREAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDDVTEVQSAI 485
+ E DR AI+ + AQ GD V++AGKGHE+YQ + + FDD + + A+
Sbjct 436 SPVVVEA-DRAAAIRQAILSAQPGDGVLLAGKGHEDYQILGTTKIHFDDREQARLAL 491
>Q9JSZ0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Neisseria meningitidis serogroup A / serotype
4A (strain DSM 15465 / Z2491)]
Length=492
Score = 314 bits (805), Expect = 4e-105
Identities = 184/470 (39%), Positives = 267/470 (57%), Gaps = 17/470 (4%)
Query 29 DSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGII--SEQPLGLEREWVCA----- 81
DSR I++ +F+A + R + A+A GA + + EW
Sbjct 29 DSRQIKQGDIFVACPG--EYADGRSYIPAAVANGAAFVFWDDDGKFAWNPEWKVPNQGIK 86
Query 82 DVRHRMGQWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLTLQQQRCAVMGTTGN 141
D++HR G + + VTGTNGKT+I++ +A+ L ++ A++GT GN
Sbjct 87 DLKHRAGILAAQVYGNVS--DGLKFWGVTGTNGKTSITQWLAQAADLLGEKTAIVGTVGN 144
Query 142 GILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLNGCDIEIAVYSN 201
G L +THTT + +Q+ L+++ ++GA A++E SSHGL+Q R+NG A+++N
Sbjct 145 GFWGALEETTHTTPAPVDVQTLLYRFRQQGATVAAMEVSSHGLDQSRVNGVSFRSAIFTN 204
Query 202 LSRDHLDYHGTLAAYAEAKSRLFAFKSLKVAVINQDDAYAELMKAVAAQNPAQPQILTYS 261
L+RDHLDYHGT+ AY KSRLF + LK AVIN DD Y + ++ + +Y
Sbjct 205 LTRDHLDYHGTMEAYGAIKSRLFYWHGLKHAVINVDDEYGAELAGRLKKDCPDLAVYSYG 264
Query 262 LTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLIAALIAAEQAGFALE 321
++ AD + + S G + P GE + LLG FN +NL A + G+ L+
Sbjct 265 FSEQADIRIIDFTASSDGIAAVFQTPWGEGKCRTRLLGRFNAQNLAACIALLCANGYPLD 324
Query 322 ELVKTVPQLIGAPGRMQVIRDQDR-LFVVDYAHTPDALNQVLKTLRRHVQQ--QLWAVFG 378
++ + ++ A GRM I + + L VVDYAHTPDAL + L TL+ Q LW VFG
Sbjct 325 NVLDVLAKIRPASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFG 384
Query 379 CGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGIDFSHHQIYEIHDR 438
CGG+RDRGKRPLM AA+ GA+ V++TSDNPR ENP I D+ + + E DR
Sbjct 385 CGGNRDRGKRPLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAP--ECVEA-DR 441
Query 439 REAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDDVTEVQSAINTQ 488
AI+Y V+ A A DI++IAGKGHENYQ++QGV+H F D+ V A+ T+
Sbjct 442 AAAIRYAVEQAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTR 491
>Q819Q0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Bacillus cereus (strain ATCC 14579 / DSM 31
/ CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599
/ NRRL B-3711)]
Length=491
Score = 296 bits (759), Expect = 3e-98
Identities = 175/466 (38%), Positives = 257/466 (55%), Gaps = 20/466 (4%)
Query 29 DSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGIISEQPLGLEREWVCADVRHRMG 88
DSR +++ LF+ + Y+ FA+ A AQGA I++E+P+ ++ V R
Sbjct 29 DSRKVKEGSLFVCMKGYTVDSHD--FAKQAAAQGAAAIVAERPIDVDVPVVLVKNTFRSL 86
Query 89 QWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLTLQQQRCAVMGTTGNGILPHLN 148
+Y +P + +I +TGTNGKTT S ++ E++ + ++GT I
Sbjct 87 AVLADYFYG-QPTHKLHLIGITGTNGKTTTSHIMDEIMRAHGHKTGLIGTINMKIGDETF 145
Query 149 PSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLNGCDIEIAVYSNLSRDHLD 208
+TT DAL LQ + V++G +E SSH L+ GR++GCD ++AV++NL++DHLD
Sbjct 146 EVKNTTPDALTLQQTFSKMVEQGVDSTVMEVSSHALDLGRVHGCDYDVAVFTNLTQDHLD 205
Query 209 YHGTLAAYAEAKSRLFA-------FKSLKVAVINQDD-AYAELMKAVAAQNPAQPQILTY 260
YH T+ Y AK LFA K AV+N DD E M++ AA ++TY
Sbjct 206 YHKTMEEYKHAKGLLFAQLGNSYNHNREKYAVLNSDDNVTEEYMRSTAA------TVVTY 259
Query 261 SLTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLIAALIAAEQAGFAL 320
+ ++D K + + G F LV P V L+G FNV N++AA A +G L
Sbjct 260 GIDTTSDIMAKNIVMTSGGTTFTLVTPYESVNVTMKLIGKFNVYNVLAATAAGLVSGVKL 319
Query 321 EELVKTVPQLIGAPGRMQVI-RDQDRLFVVDYAHTPDALNQVLKTLRRHVQQQLWAVFGC 379
E ++ + L G PGR +V+ Q+ +VDYAHTPD+L VLKT ++ + ++ + GC
Sbjct 320 ETIIAVIKDLAGVPGRFEVVDGGQNYTVIVDYAHTPDSLENVLKTAKQFAKGDVYCIVGC 379
Query 380 GGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGIDFSHHQIYEIHDRR 439
GGDRDR KRP+M A A I TSDNPR+E+P I DM G ++++ I DR+
Sbjct 380 GGDRDRTKRPIMASVATKYATHAIYTSDNPRSEDPAAILDDMVHGASGKNYEM--IIDRK 437
Query 440 EAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDDVTEVQSAI 485
EAI + + A+A DI++IAGKGHE YQ I H FDD + AI
Sbjct 438 EAIHHAIAKAKADDIIIIAGKGHETYQIIGKEVHHFDDREVAKEAI 483
>Q03523 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Bacillus subtilis (strain 168)]
Length=494
Score = 277 bits (709), Expect = 9e-91
Identities = 166/466 (36%), Positives = 256/466 (55%), Gaps = 18/466 (4%)
Query 28 LDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGIISEQPLGLEREWVCADVRHRM 87
+DSR ++K LF+ + Y+ FA+ A+ GA I++E+ + + + R
Sbjct 29 MDSREVKKGSLFVCVKGYTVDGHD--FAQKAVENGAAAIVAEREVDVNVPVIIVRQSLRA 86
Query 88 GQWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLTLQQQRCAVMGTTGNGILPHL 147
+ +P ++I +TGTNGKT+ + +V E+L +R ++GT I
Sbjct 87 LSVLSDAFYG-QPTKKLQLIGITGTNGKTSTTHMVDEILKKAGKRTGLIGTMYMKIGDET 145
Query 148 NPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLNGCDIEIAVYSNLSRDHL 207
P +TT +++ LQ + + A +E SSH L GR++GCD +IAV++NL++DHL
Sbjct 146 LPVKNTTPESVTLQKTFKKMNDKHVDTAIMEVSSHALSLGRVHGCDYDIAVFTNLTQDHL 205
Query 208 DYHGTLAAYAEAKSRLFA-------FKSLKVAVINQDDAYAELMKAVAAQNPAQPQILTY 260
DYH T+ Y AKS LF+ + K AV+N DD + + V A + I TY
Sbjct 206 DYHKTMDEYRHAKSLLFSQLGGAFNHEHPKRAVLNADDEASAYFEKVTAAH-----ISTY 260
Query 261 SLTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLIAALIAAEQAGFAL 320
+ AD K + + G F LV KG + L+G FNV N++AA+ AG
Sbjct 261 GIKNDADVMAKNISITAQGTSFDLVTNKGTKHITMSLVGQFNVYNVLAAVATCIAAGIPF 320
Query 321 EELVKTVPQLIGAPGRMQVIRDQDRL-FVVDYAHTPDALNQVLKTLRRHVQQQLWAVFGC 379
E + + V +L G GR +++ Q +VDYAHTPD+L VL+T R + +L+ V GC
Sbjct 321 EIITEAVEELHGVRGRFELVNQQQEFPVIVDYAHTPDSLENVLETCRDMTEGKLFVVVGC 380
Query 380 GGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGIDFSHHQIYEIHDRR 439
GGDRD+ KRP M + A+ A+ I TSDNPR+E+P+ I DM+ G++ +++ + I +R
Sbjct 381 GGDRDKTKRPKMAKIAVELADEPIFTSDNPRSEDPRAILRDMEAGVENAYY--HSIANRE 438
Query 440 EAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDDVTEVQSAI 485
+AI + + +A+ GD+V+IAGKGHE YQ+I FDD AI
Sbjct 439 QAIFFAIANAKKGDVVLIAGKGHETYQQIGNETFDFDDAEVAARAI 484
>P22188 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Escherichia coli (strain K12)]
Length=495
Score = 270 bits (689), Expect = 9e-88
Identities = 180/472 (38%), Positives = 249/472 (53%), Gaps = 37/472 (8%)
Query 28 LDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGIISEQPLGLEREWVCADVRHRM 87
LDSR LF+A+ + R + A+AQG II+E + E ++R
Sbjct 27 LDSRVAAAGDLFVAVVGHQADG--RRYIPQAIAQGVAAIIAEA----KDEATDGEIREMH 80
Query 88 GQWQKNYLQKT-------------EPVNAARIIAVTGTNGKTTISRLVAELLTLQQQRCA 134
G YL + EP + R++ VTGTNGKTT ++L+A+ L + A
Sbjct 81 GV-PVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGEISA 139
Query 135 VMGTTGNGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLNGCDI 194
VMGT GNG+L + P+ +TT A+ +Q L V +GA F ++E SSHGL Q R+
Sbjct 140 VMGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALKF 199
Query 195 EIAVYSNLSRDHLDYHGTLAAYAEAKSRLFAFKSLKVAVINQDDA-----YAELMKAVAA 249
+V++NLSRDHLDYHG + Y AK L++ A+IN DD A+L AVA
Sbjct 200 AASVFTNLSRDHLDYHGDMEHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAV 259
Query 250 --QNPAQPQILTYSLTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLI 307
++ P E+ Y SGA G+ +ES L+G FNV NL+
Sbjct 260 SMEDHINPN------CHGRWLKATEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLL 313
Query 308 AALIAAEQAGFALEELVKTVPQLIGAPGRMQVIRDQDR-LFVVDYAHTPDALNQVLKTLR 366
AL G+ L +L+KT +L GRM+V + VVDYAHTPDAL + L+ R
Sbjct 314 LALATLLALGYPLADLLKTAARLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAAR 373
Query 367 RHVQQQLWAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTG-I 425
H +LW VFGCGGDRD+GKRPLM A A+ ++T DNPRTE P+ I D+ G +
Sbjct 374 LHCAGKLWCVFGCGGDRDKGKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGML 433
Query 426 DFSHHQIYEIHDRREAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDD 477
D H ++ E R EA+ V A+ D+V++AGKGHE+YQ + R + D
Sbjct 434 DAGHAKVME--GRAEAVTCAVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSD 483
>Q9WY79 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase
[Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM
10099 / NBRC 100826 / MSB8)]
Length=490
Score = 252 bits (644), Expect = 3e-81
Identities = 162/474 (34%), Positives = 261/474 (55%), Gaps = 20/474 (4%)
Query 2 MSVSFEMISAIDAAIEWR---DQPFQGFCLDSRYIQKDQLFIALTSYSQPEKTRIFAETA 58
M++S + + D +E R D G S ++K LFI + + I E
Sbjct 1 MNISTIVSNLKDLILEVRAPYDLEITGVSNHSSKVKKGDLFICRRG-EKFDSHEIIPEV- 58
Query 59 LAQGALGIISEQPLGLEREWVCA-DVRHRMGQWQKNYLQKTEPVNAARIIAVTGTNGKTT 117
+ +GA+ ++ E+ + L+ ++ D R+ + + + +P VTGTNGKTT
Sbjct 59 MEKGAVAVVVEREIDLDFPYIQVFDSRYFEAKVASLFFE--DPWKDVLTFGVTGTNGKTT 116
Query 118 ISRLVAELLTLQQQRCAVMGTTGNGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASL 177
+ ++ +LT +R +V+ T IL + TT DA+ + SA+ + + G +F +L
Sbjct 117 TTMMIYHMLTSLGERGSVLTTAVKRILGNSYYDDITTPDAITILSAMKENREGGGKFFAL 176
Query 178 EASSHGLEQGRLNGCDIEIAVYSNLSRDHLDYHGTLAAYAEAKSRLFAFKSLKVAVINQD 237
E SSH L Q R+ G ++ +++N+SRDHLD+HGT Y +AK LF + +D
Sbjct 177 EVSSHALVQQRVEGVRFDVGIFTNISRDHLDFHGTFENYLKAKLHLFD--------LLKD 228
Query 238 DAYAELMKAVAAQNPAQPQILTYSLTQSADYSVKELQYSLSGARFILVGPKGEYLVESPL 297
D A L +++A + + +T+ +++ADY + ++ S G +F+L P G V +
Sbjct 229 DGVAVLNESLADAFNRKSRKITFGTSKNADYRLGNIEVSWEGTQFVLETPDGLLKVFTRA 288
Query 298 LGHFNVENLIAALIAAEQAGFALEELVKTVPQLIGAPGRMQVIRDQDRL---FVVDYAHT 354
+G FN N AA+ A Q G+ ++L ++ G GR +V+R ++ VVD+AH+
Sbjct 289 IGDFNAYNAAAAIAALHQLGYDPKDLASSLETFTGVEGRFEVVRGAKKIGLNVVVDFAHS 348
Query 355 PDALNQVLKTLRRHVQQQLWAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENP 414
PDAL ++LK +R+ Q ++ VFG GG+ DRGKRP+M++ A A+ VILT+D+PR E+P
Sbjct 349 PDALEKLLKNVRKISQGRVIVVFGAGGNSDRGKRPMMSEVASKLADVVILTTDDPRGEDP 408
Query 415 KQIFADMKTGIDFSHHQIYEIHDRREAIKYVVQHAQAGDIVVIAGKGHENYQEI 468
+QI D+ GID + DRREAI+ + A GD VVIAG+GHE YQ I
Sbjct 409 EQIMEDLIKGID-KRKPYLVLFDRREAIETALTIANRGDSVVIAGRGHERYQII 461
>O86491 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase
[Staphylococcus aureus (strain COL)]
Length=493
Score = 249 bits (636), Expect = 6e-80
Identities = 154/459 (34%), Positives = 240/459 (52%), Gaps = 19/459 (4%)
Query 20 DQPFQGFCLDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGII--SEQPLGLERE 77
+Q DSR ++ +F+A Y+ F + QG ++ EQ L
Sbjct 20 EQQIDDITTDSRTAREGSIFVASVGYTVDSHK--FCQNVADQGCKLVVVNKEQSLPANVT 77
Query 78 WVCADVRHRMGQWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLTLQQQRCAVMG 137
V R+ + L P + VTGTNGKT+I+ ++ + Q+ A +G
Sbjct 78 QVVVPDTLRVASILAHTLYDY-PSHQLVTFGVTGTNGKTSIATMIHLIQRKLQKNSAYLG 136
Query 138 TTGNGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLNGCDIEIA 197
T G I +TT + + L + + V GA +LE SSHGL GRL G + ++A
Sbjct 137 TNGFQINETKTKGANTTPETVSLTKKIKEAVDAGAESMTLEVSSHGLVLGRLRGVEFDVA 196
Query 198 VYSNLSRDHLDYHGTLAAYAEAKSRLFA-----FKSLKVAVINQDDAYAELMKAVAAQNP 252
++SNL++DHLD+HGT+ AY AKS LF+ K V+N DD+++E ++ V
Sbjct 197 IFSNLTQDHLDFHGTMEAYGHAKSLLFSQLGEDLSKEKYVVLNNDDSFSEYLRTVTPY-- 254
Query 253 AQPQILTYSLTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLIAALIA 312
++ +Y + + A + K +Q SL G F V P G Y V+SP +G FN+ N++AA+IA
Sbjct 255 ---EVFSYGIDEEAQFMAKNIQESLQGVSFDFVTPFGTYPVKSPYVGKFNISNIMAAMIA 311
Query 313 AEQAGFALEELVKTVPQLIGAPGRMQVIRDQDRL-FVVDYAHTPDALNQVLKTLRRHVQQ 371
G +LE ++K V L GR++V+ + ++DYAHT D +N+++ ++ V+Q
Sbjct 312 VWSKGTSLETIIKAVENLEPVEGRLEVLDPSLPIDLIIDYAHTADGMNKLIDAVQPFVKQ 371
Query 372 QLWAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGIDFSHHQ 431
+L + G G+RD K P M + A A+ VI T DNP ++PK + A++ G +H
Sbjct 372 KLIFLVGMAGERDLTKTPEMGRVACR-ADYVIFTPDNPANDDPKMLTAELAKGA--THQN 428
Query 432 IYEIHDRREAIKYVVQHAQAGDIVVIAGKGHENYQEIQG 470
E DR E IK+ + A+ GD VV+A KG E YQ + G
Sbjct 429 YIEFDDRAEGIKHAIDIAEPGDTVVLASKGREPYQIMPG 467
>Q2FZP6 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase
[Staphylococcus aureus (strain NCTC 8325 / PS 47)]
Length=493
Score = 249 bits (636), Expect = 6e-80
Identities = 154/459 (34%), Positives = 240/459 (52%), Gaps = 19/459 (4%)
Query 20 DQPFQGFCLDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGII--SEQPLGLERE 77
+Q DSR ++ +F+A Y+ F + QG ++ EQ L
Sbjct 20 EQQIDDITTDSRTAREGSIFVASVGYTVDSHK--FCQNVADQGCKLVVVNKEQSLPANVT 77
Query 78 WVCADVRHRMGQWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLTLQQQRCAVMG 137
V R+ + L P + VTGTNGKT+I+ ++ + Q+ A +G
Sbjct 78 QVVVPDTLRVASILAHTLYDY-PSHQLVTFGVTGTNGKTSIATMIHLIQRKLQKNSAYLG 136
Query 138 TTGNGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLNGCDIEIA 197
T G I +TT + + L + + V GA +LE SSHGL GRL G + ++A
Sbjct 137 TNGFQINETKTKGANTTPETVSLTKKIKEAVDAGAESMTLEVSSHGLVLGRLRGVEFDVA 196
Query 198 VYSNLSRDHLDYHGTLAAYAEAKSRLFA-----FKSLKVAVINQDDAYAELMKAVAAQNP 252
++SNL++DHLD+HGT+ AY AKS LF+ K V+N DD+++E ++ V
Sbjct 197 IFSNLTQDHLDFHGTMEAYGHAKSLLFSQLGEDLSKEKYVVLNNDDSFSEYLRTVTPY-- 254
Query 253 AQPQILTYSLTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLIAALIA 312
++ +Y + + A + K +Q SL G F V P G Y V+SP +G FN+ N++AA+IA
Sbjct 255 ---EVFSYGIDEEAQFMAKNIQESLQGVSFDFVTPFGTYPVKSPYVGKFNISNIMAAMIA 311
Query 313 AEQAGFALEELVKTVPQLIGAPGRMQVIRDQDRL-FVVDYAHTPDALNQVLKTLRRHVQQ 371
G +LE ++K V L GR++V+ + ++DYAHT D +N+++ ++ V+Q
Sbjct 312 VWSKGTSLETIIKAVENLEPVEGRLEVLDPSLPIDLIIDYAHTADGMNKLIDAVQPFVKQ 371
Query 372 QLWAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGIDFSHHQ 431
+L + G G+RD K P M + A A+ VI T DNP ++PK + A++ G +H
Sbjct 372 KLIFLVGMAGERDLTKTPEMGRVACR-ADYVIFTPDNPANDDPKMLTAELAKGA--THQN 428
Query 432 IYEIHDRREAIKYVVQHAQAGDIVVIAGKGHENYQEIQG 470
E DR E IK+ + A+ GD VV+A KG E YQ + G
Sbjct 429 YIEFDDRAEGIKHAIDIAEPGDTVVLASKGREPYQIMPG 467
>O85298 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Buchnera aphidicola subsp. Schizaphis graminum
(strain Sg)]
Length=497
Score = 235 bits (599), Expect = 2e-74
Identities = 149/469 (32%), Positives = 244/469 (52%), Gaps = 35/469 (7%)
Query 23 FQGFCLDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGIISEQPLGLEREWVCAD 82
F LDSR + +FIA+ + IF A+ + + I+SE + + +
Sbjct 22 FSNLSLDSRKLTSKDVFIAIKGTKKDGNDFIFE--AVKKRVVAILSET----KEKKKHGE 75
Query 83 VRH----------RMGQWQKNYLQKT--EPVNAARIIAVTGTNGKTTISRLVAELLTLQQ 130
+ + ++ + N + EP +II VTGTNGKTT+++L+ + L
Sbjct 76 INYINNIPILSFFKLSEKISNLAARVYKEPAKTLKIIGVTGTNGKTTVTQLINQWSELLG 135
Query 131 QRCAVMGTTGNGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLN 190
++ A MGT GNG L + +TT A+ +QS LH K+ ++E SSHGL Q R+
Sbjct 136 KKIATMGTLGNGFYNALKTTKNTTSSAIDIQSFLHIAAKKKINLVTMEVSSHGLVQNRVK 195
Query 191 GCDIEIAVYSNLSRDHLDYHGTLAAYAEAKSRLFAFKSLKVAVINQDDAYAE--LMK--- 245
I +++NL++DHLDYH + Y AK F+ +K ++N +D YA+ L K
Sbjct 196 NIPFYIGIFTNLTQDHLDYHKNMKQYESAKWSFFSQHKIKKIILNANDKYAKKWLRKLSD 255
Query 246 ----AVAAQNPAQPQILTYSLTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHF 301
AV QN Q + T + + ++Y+++ G+ ++ + L+G+F
Sbjct 256 KYTIAVTIQNEKQKKYSTKWINATG------IKYNVNSTDVEFESSWGQGILSTCLIGYF 309
Query 302 NVENLIAALIAAEQAGFALEELVKTVPQLIGAPGRMQVIRDQDR-LFVVDYAHTPDALNQ 360
N++NL+ + + + + L +L+ T QL GRMQ + ++DYAHTPDAL +
Sbjct 310 NIQNLLLSFASMLEMNYKLSDLINTSIQLQPILGRMQKFDVFGKPKVIIDYAHTPDALKK 369
Query 361 VLKTLRRHVQQQLWAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFAD 420
L ++ + ++++W +FGCGG+RD+ KRPLM + A+ VI+T+DNPR EN +I +
Sbjct 370 ALNAIKSYYKKKIWCIFGCGGERDQTKRPLMGSISEKIADRVIITNDNPRNENQNKIIKE 429
Query 421 MKTGIDFSHHQIYEIHDRREAIKYVVQHAQAGDIVVIAGKGHENYQEIQ 469
+ G +I I +R +AI A DI+ I+GKGHEN Q I+
Sbjct 430 IVQGC-IKKEKIIIIPNREKAISSTFFKANIDDIIFISGKGHENQQIIK 477
>Q9RNM2 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase [Zymomonas mobilis subsp. mobilis (strain ATCC
31821 / ZM4 / CP4)]
Length=486
Score = 213 bits (541), Expect = 4e-66
Identities = 160/478 (33%), Positives = 234/478 (49%), Gaps = 25/478 (5%)
Query 19 RDQPFQGFCLDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGIISEQPLGLER-- 76
+D P GF +DSR + K +F A + F E A+A GA+ I++ + +E
Sbjct 22 KDYPVLGFAVDSRKVAKGFVFGAFPGAKVNGED--FIEKAIAAGAVAIVARPEVKIEGAV 79
Query 77 EWVCADVRHRMGQWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLTLQQQRCAVM 136
V + R + + PV AA VTGTNGKT+++ L +L T+ + A +
Sbjct 80 HLVAENPRLAFAEMAARFYAPFPPVMAA----VTGTNGKTSVAELCRQLWTITGHKAASI 135
Query 137 GTTGNGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLNGCDIEI 196
GT G + TT D + S + EASSHGL+Q R +G +
Sbjct 136 GTLGVITAKNSYSLGMTTPDVVTFLSCCSDLARADISHVIFEASSHGLDQYRSDGAKVIA 195
Query 197 AVYSNLSRDHLDYHGTLAAYAEAKSRLFAFKSLK--VAVINQDDAYAELMKAVAAQNPAQ 254
+++ SRDHLDYHGT+ Y AK RLF + AVI DD A + A + +
Sbjct 196 GAFTSFSRDHLDYHGTMERYLAAKLRLFDERIAPDGTAVIWADDPAATTVIAHVQKRGLK 255
Query 255 PQILTYSLTQSADYSVKELQYSLSGARFILVGPKGE-YLVESPLLGHFNVENLIAALIAA 313
+ + A+ + + S + I + KGE Y + PL+G + + N + A
Sbjct 256 ----LIDIGEKAEAIRLVNREADSQGQMITLSIKGESYKIRLPLIGGYQLSNALVAAGLV 311
Query 314 EQAGFALEELVKTVPQLIGAPGRMQ-VIRDQDRLFV-VDYAHTPDALNQVLKTLRRHVQQ 371
G +++ + + L GR++ + Q+ V VDYAHTPD L ++ LR H +
Sbjct 312 LATGGDIKQTMAALTLLKPVRGRLERATQSQNGAEVYVDYAHTPDGLRAAIEALRPHTEG 371
Query 372 QLWAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGIDFSHHQ 431
LW VFG GGDRD+GKRP M + A N A+ VI+T DNPR E+ I ++ G +
Sbjct 372 LLWVVFGAGGDRDKGKRPEMGKIAANLADHVIVTDDNPRGEDAATIRKEVLVGAPLAE-- 429
Query 432 IYEIHDRREAIKYVVQHAQAGDIVVIAGKGHENYQEIQGVRHW----FDDVTEVQSAI 485
EI R+EAI ++ A+ GDIV+IAGKGHE Q I FDDVT + A+
Sbjct 430 --EIGGRKEAIFSAIKRAEKGDIVLIAGKGHEQGQIIGRGETMRVLPFDDVTVAKEAV 485
>F4I3P9 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase MurE homolog, chloroplastic [Arabidopsis thaliana]
Length=772
Score = 206 bits (524), Expect = 1e-61
Identities = 148/498 (30%), Positives = 244/498 (49%), Gaps = 43/498 (9%)
Query 20 DQPFQGFCLDSRYIQKDQLFIALTSYSQPEKTRIFAETALAQGALGIISEQPLGLEREWV 79
D G DSR + LF+ F A +GA+ +++ + + +E
Sbjct 262 DVEITGIQHDSRGVSAGDLFVCCLGSEN------FLSEADKRGAVAVVASKEIDIEDTLG 315
Query 80 CA------DVRHRMGQWQKNYLQKTEPVNAARIIAVTGTNGKTTISRLVAELLTLQQQRC 133
C D + ++ + P +I VTGT+GKTT + L+ L R
Sbjct 316 CRALVIVEDTNAVLAALASSFYR--HPSKNMSVIGVTGTDGKTTTTYLIKSLYEAMGVRT 373
Query 134 AVMGTTG---NGILPHLNPSTHTTLDALQLQSALHQYVKEGARFASLEASSHGLEQGRLN 190
+ T +G P+ DA+ +QS + + + G +EAS L G+ +
Sbjct 374 GMFSTVSCYIHGDNKLDTPNATMNPDAVLVQSLMAKMLHNGTESLVMEASPQELALGKCD 433
Query 191 GCDIEIAVYSNLSRDHLDYHGTLAAYAEAKSRLFAFK---SLKVAVINQDDAYAELMKAV 247
D +IAV++NL+R++ D+ GT Y +A+++LF+ V+N DD A V
Sbjct 434 EVDFDIAVFTNLTRENTDFRGTDEEYRDAEAKLFSRMVDPERHRKVVNIDDPNAAFF--V 491
Query 248 AAQNPAQPQILTYSLTQSADYSVKELQYSLSGARFILVGPKGEYLVESPLLGHFNVENLI 307
NP P + AD + + SL + ++ P+G + S LLG N+ N++
Sbjct 492 QQGNPNVPVVTFAMENTKADVHPLKFELSLFETQVLVNTPQGILEISSGLLGRHNIYNIL 551
Query 308 AALIAAEQAGFALEELVKTVPQLIGAPGRMQVIRDQDRLF--VVDYAHTPDALNQVLKTL 365
AA+ G LE++V+ V ++ PGR ++I D+++ F +VD+A+TPD L+++L ++
Sbjct 552 AAVAVGIAVGAPLEDIVRGVEEVDAVPGRCELI-DEEQAFGVIVDHANTPDGLSRLLDSI 610
Query 366 RRHVQQQLWAVFGCGGDRDRGKRPLMTQAALNGANPVILTSDNPRTENPKQIFADMKTGI 425
R +++ V GC G+ +RGKRPLMT+ A ++ +LTSDNPR E+P I DM +GI
Sbjct 611 RELKPRRIITVIGCEGENERGKRPLMTKIATEKSDVTMLTSDNPRNEDPLDILDDMLSGI 670
Query 426 DFS--------HHQIYE---------IHD-RREAIKYVVQHAQAGDIVVIAGKGHENYQE 467
++ H Y +HD RR A++ V + GD+VV+AGKGHE YQ
Sbjct 671 GWTMQEYLKHGEHDYYPPLANGHRLFLHDIRRVAVRCAVAMGEEGDMVVVAGKGHEAYQL 730
Query 468 IQGVRHWFDDVTEVQSAI 485
+ ++DD E + A+
Sbjct 731 EGEKKEFYDDREECREAL 748
>K7WCC7 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase MurE homolog, chloroplastic [Zea mays]
Length=760
Score = 166 bits (421), Expect = 2e-47
Identities = 134/462 (29%), Positives = 225/462 (49%), Gaps = 47/462 (10%)
Query 61 QGALGIISEQPLGLEREWVCA------DVRHRMGQWQKNYLQKTEPVNAARIIAVTGTNG 114
+GA+ ++++Q L +E C D+ + + L +N A II VTGT+G
Sbjct 285 RGAVAVVADQDLNIEGTLACRALVIVDDILTAL-RVLPACLYSRPSMNMA-IIGVTGTDG 342
Query 115 KTTISRLVAELLTLQQQRCAVMGTTGNGILPH--LNPSTHTTLDALQLQSALHQYVKEGA 172
TT + LV + R ++G G L+ + D + Q + + G
Sbjct 343 VTTTTHLVKAMYEAMGVRTGLVGVLGTYAFSSNKLDARPDASSDPIAAQKLMATMLHNGT 402
Query 173 RFASLEASSHGLEQGRLNG-CDIEIAVYSNLSRDHLDYHGTLAAYAEAKSRLFAFKSLKV 231
LE + G+ ++ D +IAV +N+ H D + Y E SR+ + S V
Sbjct 403 EAVVLEKGTDGMPPSGVDSEIDYDIAVLTNVR--HTDEENGMT-YEEYMSRMASLFSRMV 459
Query 232 ------AVINQDDAYAELMKAVAAQNPAQPQILTYSL-TQSADYSVKELQYSLSGARFIL 284
V+N DD A AAQ ++TYS + AD + Q SL ++
Sbjct 460 DPERHRKVVNIDDPSAPFF---AAQGGHDVPVVTYSFENKKADVHTLKYQLSLFETEVLV 516
Query 285 VGPKGEYLVESPLLGHFNVENLIAALIAAEQAGFALEELVKTVPQLIGAPGRMQVIRDQD 344
P G + S LLG N+ +++A + G LE++V+ + ++ PGR ++I D++
Sbjct 517 QTPHGILEISSGLLGRDNIYSILATVAVGIAVGAPLEDIVRGIEEVDAIPGRCELI-DEE 575
Query 345 RLF--VVDYAHTPDALNQVLKTLRRHVQQQLWAVFGCGGDRDRGKRPLMTQAALNGANPV 402
+ F +VD+A TP+AL+++L +R +++ V GC G+++RGKRP+MT+ A + ++ V
Sbjct 576 QAFGVIVDHARTPEALSRLLDGVRELGPRRIVTVVGCCGEKERGKRPVMTKIAADKSDVV 635
Query 403 ILTSDNPRTENPKQIFADMKTGIDF------------------SHHQIYEIHD-RREAIK 443
+LTSDNP E+P I DM G+ + + H+++ +HD RR A++
Sbjct 636 MLTSDNPANEDPLDILDDMLAGVGWTMEEYLKYGANDYYPPLPNGHRLF-LHDIRRVAVR 694
Query 444 YVVQHAQAGDIVVIAGKGHENYQEIQGVRHWFDDVTEVQSAI 485
V + GD+VVI GKG++ YQ +FDD E + A+
Sbjct 695 AAVAMGEQGDVVVITGKGNDTYQIEGDKNEFFDDREECREAL 736
Lambda K H a alpha
0.320 0.134 0.391 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 4130490
Database: 7778f80e2a3ff309629a02fe315a8727.SwissProt.fasta
Posted date: May 18, 2024 8:29 PM
Number of letters in database: 10,382
Number of sequences in database: 20
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
