BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 187f431d235bce5e3309621576995885.SwissProt.fasta
14 sequences; 9,693 total letters
Query= ACIAD3341
Length=930
Score E
Sequences producing significant alignments: (Bits) Value
Q9I2S7 Lysine decarboxylase LdcA [Pseudomonas aeruginosa (strain ... 207 3e-59
P52095 Constitutive lysine decarboxylase [Escherichia coli (strai... 178 9e-50
P05033 Lysine decarboxylase [Hafnia alvei] 173 7e-48
P0A1Z1 Inducible lysine decarboxylase [Salmonella typhi] 166 1e-45
P0A1Z0 Inducible lysine decarboxylase [Salmonella typhimurium (st... 166 1e-45
P28629 Biodegradative arginine decarboxylase [Escherichia coli (s... 163 1e-44
P0A9H4 Inducible lysine decarboxylase [Escherichia coli O157:H7] 161 5e-44
P0A9H3 Inducible lysine decarboxylase [Escherichia coli (strain K... 161 5e-44
P21169 Constitutive ornithine decarboxylase [Escherichia coli (st... 155 3e-42
P24169 Inducible ornithine decarboxylase [Escherichia coli (strai... 144 1e-38
P44317 Ornithine decarboxylase [Haemophilus influenzae (strain AT... 132 1e-34
Q81MS2 Arginine decarboxylase [Bacillus anthracis] 124 7e-33
P21885 Arginine decarboxylase [Bacillus subtilis (strain 168)] 119 4e-31
P43099 Inducible ornithine decarboxylase [Lactobacillus sp. (stra... 111 5e-28
>Q9I2S7 Lysine decarboxylase LdcA [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228
/ 1C / PRS 101 / PAO1)]
Length=751
Score = 207 bits (527), Expect = 3e-59
Identities = 182/665 (27%), Positives = 307/665 (46%), Gaps = 77/665 (12%)
Query 233 IAKLR-PELDLYLVTD-AGVENIASHAGSEI--FKRIFFGEEDHIELYNAIMKGVGERYR 288
+A++R P+L ++ + + +EN + + +++ + I + ED + + Y
Sbjct 85 VARVRAPQLPIFALGEQVTIENAPAESMADLHQLRGILYLFEDTVPFLARQVARAARNYL 144
Query 289 T----PFFNALRDYSKQPTGMFHALPLARGKAILNSNWIGDLAQFYGMNLFMAETSATSG 344
PFF AL +++ Q +H G A S QF+G N ++ S +
Sbjct 145 AGLLPPFFRALVEHTAQSNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVP 204
Query 345 GLDSLLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVVQSLVREGDIVLVDRNCH 404
L SLL+ GPL A++ AAR FGA TFF NGTST NKIV S+V D+VLVDRNCH
Sbjct 205 ELGSLLDHTGPLAEAEDRAARNFGADHTFFVINGTSTANKIVWHSMVGREDLVLVDRNCH 264
Query 405 KSHHYGLVLTGASAAYLDSYPLNEYSMYGAVPIWHIKQTLLSFKRA------GTLDRVKL 458
KS + +++TGA YL + NE + G +P+ + ++ K A G +VKL
Sbjct 265 KSILHSIIMTGAIPLYL-TPERNELGIIGPIPLSEFSKQSIAAKIAASPLARGREPKVKL 323
Query 459 VLLTNCTFDGVVYDVERVMMECLAIKPDLIFLWDEAWFAFASCHPIYRQRTAMANAAKLA 518
++TN T+DG+ Y+ E ++ + L +++ +DEAW+A+A+ H Y R M
Sbjct 324 AVVTNSTYDGLCYNAE-LIKQTLGDSVEVLH-FDEAWYAYAAFHEFYDGRYGMG------ 375
Query 519 ERFKTPEYAREYAEWKDSIDWEDDQQLINTRLMPDPALARVRVYSTHSTHKTLTALRQGS 578
+R P V++THSTHK L A Q S
Sbjct 376 ----------------------------TSRSEEGPL-----VFATHSTHKMLAAFSQAS 402
Query 579 MIHIWDQDFKEKSEEAFIEAYMTHTSTSANYQILASLDVGRRQVE-MEGYQLVQRQLELA 637
MIH+ D ++ F EA+M H STS Y I+ASLDV +E G L+Q + A
Sbjct 403 MIHVQDGGTRKLDVARFNEAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLIQETFDEA 462
Query 638 MSLREQVMH-HPLLKRHFHFLRVGNIIPTAYRES-GVNSY-FDEGKGWANLEKAWSMDEF 694
+S R + + L R+ + V + G + + + W + D
Sbjct 463 LSFRRALANVRQNLDRNDWWFGVWQPEQVEGTDQVGTHDWVLEPSADWHGFGDI-AEDYV 521
Query 695 VMDPTRATLMIGMVGMDGDTFKN-------TELMNKYGIQINKTSRNTVLFIINIGTTRS 747
++DP + TL + G + + + + G+ + KT + L + ++G T+
Sbjct 522 LLDPIKVTLTTPGLSAGGKLSEQGIPAAIVSRFLWERGLVVEKTGLYSFLVLFSMGITKG 581
Query 748 AIAYLIEVLVKIAR--DVDRRVADMSSAERRIHLKRVNSLTQEQPPLPDFS-AFHRAFRG 804
+ L+ L++ R D + + D+ + + KR N + L D S A H ++R
Sbjct 582 KWSTLVTELLEFKRCYDANLPLLDVLPSVAQAGGKRYNGV-----GLRDLSDAMHASYRD 636
Query 805 QSLNPAIQTRDGNIRQAFFLSYEDSSCEYIDMQEAAVAIASGRELVSALFVIPYPPGFPI 864
+ A++ R + + ++ + + + AV IA ++A+ ++PYPPG P+
Sbjct 637 NATAKAMK-RMYTVLPEVAMRPSEAYDKLVRGEVEAVPIARLEGRIAAVMLVPYPPGIPL 695
Query 865 LVPGQ 869
++PG+
Sbjct 696 IMPGE 700
>P52095 Constitutive lysine decarboxylase [Escherichia coli (strain
K12)]
Length=713
Score = 178 bits (452), Expect = 9e-50
Identities = 167/633 (26%), Positives = 265/633 (42%), Gaps = 124/633 (20%)
Query 290 PFFNALRDYSKQPTGMFHALPLARGKAILNSNWIGDLA-QFYGMNLFMAETSATSGGLDS 348
PF AL Y K+ F P G + +G L F+G N A+ S + L S
Sbjct 131 PFTKALFTYVKERKYTF-CTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGS 189
Query 349 LLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVVQSLVREGDIVLVDRNCHKSHH 408
LL+ GP A+EY AR FGA++++ TNGTST NKIV G +L+DRNCHKS
Sbjct 190 LLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLIDRNCHKSLA 249
Query 409 YGLVLTGASAAYLDSYPLNEYSMYGAVPIWHIKQTLLSFKRAGTLDRVKLV--LLTNCTF 466
+ L++ +L N + G +P + + K A T V ++TN T+
Sbjct 250 HLLMMNDVVPVWLKP-TRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY 308
Query 467 DGVVYDVERVMMECLAIKPDLIFLWDEAWFAFASCHPIYRQRTAMANAAKLAERFKTPEY 526
DG++Y+ + + + L + P + F D AW + HPIY+ ++ M+ ER
Sbjct 309 DGLLYNTDWI-KQTLDV-PSIHF--DSAWVPYTHFHPIYQGKSGMS-----GER------ 353
Query 527 AREYAEWKDSIDWEDDQQLINTRLMPDPALARVRVYSTHSTHKTLTALRQGSMIHIWDQD 586
+A ++ T STHK L AL Q S+IHI
Sbjct 354 -----------------------------VAGKVIFETQSTHKMLAALSQASLIHIKG-- 382
Query 587 FKEKSEEAFIEAYMTHTSTSANYQILASLDVGRRQVE-MEGYQLVQRQLELAMSLREQVM 645
E EEAF EA+M HT+TS +Y I+AS++ + G +L+ R +E A+ R++V
Sbjct 383 --EYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQ 440
Query 646 HHPLLKRHFHFLRVGNIIPTAYRESGVNSYFD----------------EGKGWANLEKAW 689
RE +FD G+ W A
Sbjct 441 R--------------------LREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDA- 479
Query 690 SMDEFVMDPTRATLMIGMVGMDGDTFKN-------TELMNKYGIQINKTSRNTVLFIINI 742
D +DP + T++ + G+ + + +++ GI + KT +LF+ +I
Sbjct 480 DADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSI 539
Query 743 GTTRSAIAYLIEVLVKIARDVDRRVADMSSAERRIHLKRVNSLTQEQPPLPDF------- 795
G ++ L+ L + R D ++L+ N L PDF
Sbjct 540 GIDKTKAMGLLRGLTEFKRSYD------------LNLRIKNMLPDLYAEDPDFYRNMRIQ 587
Query 796 ---SAFHRAFRGQSLNPAIQTRDGNIRQAFFLSYEDSSCEYIDMQEAAVAIASGRELVSA 852
H+ R L P + R + ++ + I + +A+ VSA
Sbjct 588 DLAQGIHKLIRKHDL-PGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSA 646
Query 853 LFVIPYPPGFPILVPGQVISSE---ILKFMAAL 882
++PYPPG P+L+PG++++ E +L F+ L
Sbjct 647 NMILPYPPGVPLLMPGEMLTKESRTVLDFLLML 679
>P05033 Lysine decarboxylase [Hafnia alvei]
Length=739
Score = 173 bits (438), Expect = 7e-48
Identities = 163/619 (26%), Positives = 265/619 (43%), Gaps = 96/619 (16%)
Query 290 PFFNALRDYSKQPTGMFHALPLARGKAILNSNWIGDLA-QFYGMNLFMAETSATSGGLDS 348
P AL Y K+ P G + + +G L F+G N ++ S + L S
Sbjct 131 PLTKALFKYVKEEKYTV-CTPGHMGGTAFDKSPVGSLFYDFFGENTMRSDISISVSELGS 189
Query 349 LLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVVQSLVREGDIVLVDRNCHKSHH 408
LL+ GP + A+EY AR F A R++ TNGTST NKIV G +L+DRNCHKS
Sbjct 190 LLDHSGPHRDAEEYIARTFNADRSYIVTNGTSTANKIVGMYSSPAGATILIDRNCHKSLT 249
Query 409 YGLVLTGASAAYLDSYPLNEYSMYGAVPIWHIKQTLLSFKRAGTLDRVKLV--LLTNCTF 466
+ ++++ YL N Y + G +P + + K T + V ++TN T+
Sbjct 250 HLMMMSNVVPVYLRP-TRNAYGILGGIPQSEFTRASIEEKVKNTPNATWPVHAVVTNSTY 308
Query 467 DGVVYDVERVMMECLAIKPDLIFLWDEAWFAFASCHPIYRQRTAMANAAKLAERFKTPEY 526
DG+ Y+ E + L +K +D AW + + HPIY+ + M+ ER
Sbjct 309 DGLFYNTEYI-KNTLDVKS---IHFDSAWVPYTNFHPIYQGKAGMS-----GER------ 353
Query 527 AREYAEWKDSIDWEDDQQLINTRLMPDPALARVRVYSTHSTHKTLTALRQGSMIHIWDQD 586
+P +Y T STHK L A Q SMIH+
Sbjct 354 ------------------------VPGKI-----IYETQSTHKLLAAFSQASMIHVKG-- 382
Query 587 FKEKSEEAFIEAYMTHTSTSANYQILASLDVGRRQVE-MEGYQLVQRQLELAMSLREQVM 645
E +EE F EAYM HTSTS +Y I+AS + ++ G +L+ +E A+ R+++
Sbjct 383 --EINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIR 440
Query 646 HHPLLKRHFHF--LRVGNIIPTAYRESGVNSYFDEGKGWANLEKAWSMDEFVMDPTRATL 703
+ F + NI A +E G+ N++ D +DP + TL
Sbjct 441 RLRTESDGWFFDVWQPDNIDEVACWPLNPR---NEWHGFPNIDN----DHMYLDPIKVTL 493
Query 704 MIGMVGMDGDTFKN-------TELMNKYGIQINKTSRNTVLFIINIGTTRSAIAYLIEVL 756
+ + +G + ++ ++++GI + KT +LF+ +IG ++ L+ L
Sbjct 494 LTPGLSPNGTLEEEGIPASIVSKYLDEHGIIVEKTGPYNLLFLFSIGIDKTKALSLLRAL 553
Query 757 VKIARDVDRRVADMSSAERRIHLKRVNSLTQEQPPLPDF----------SAFHRAFRGQS 806
R D ++L+ N L PDF H + +
Sbjct 554 TDFKRVYD------------LNLRVKNVLPSLYNEAPDFYKEMRIQELAQGIHALVKHHN 601
Query 807 LNPAIQTRDGNIRQAFFLSYEDSSCEYIDMQEAAVAIASGRELVSALFVIPYPPGFPILV 866
L P + R + ++ D+ E + A+ VSA ++PYPPG P+++
Sbjct 602 L-PDLMYRAFEVLPKLVMTPHDAFQEEVRGNIEPCALDDMLGKVSANMILPYPPGVPVVM 660
Query 867 PGQVISSE---ILKFMAAL 882
PG++++ E +L F+ L
Sbjct 661 PGEMLTKESRPVLSFLQML 679
>P0A1Z1 Inducible lysine decarboxylase [Salmonella typhi]
Length=714
Score = 166 bits (420), Expect = 1e-45
Identities = 166/627 (26%), Positives = 275/627 (44%), Gaps = 112/627 (18%)
Query 290 PFFNALRDYSKQPTGMFHALPLARGKAILNSNWIGDLA-QFYGMNLFMAETSATSGGLDS 348
P AL Y ++ F P G + +G + F+G N ++ S + L S
Sbjct 131 PLTKALFKYVREGKYTF-CTPGHMGGTAFQKSPVGSIFYDFFGPNTMKSDISISVSELGS 189
Query 349 LLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVVQSLVREGDIVLVDRNCHKSHH 408
LL+ GP K A+EY AR F A+R++ TNGTST NKIV G VL+DRNCHKS
Sbjct 190 LLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT 249
Query 409 YGLVLTGASAAYLDSYPLNEYSMYGAVPIWHIKQTLLSFKRAGTLDRVKLV--LLTNCTF 466
+ ++++ + Y N Y + G +P + ++ + T + V ++TN T+
Sbjct 250 HLMMMSDITPIYFRP-TRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY 308
Query 467 DGVVYDVERVMMECLAIKPDLIFLWDEAWFAFASCHPIYRQRTAMANAAKLAERFKTPEY 526
DG++Y+ + + + L +K +D AW + + PIY+ + M+
Sbjct 309 DGLLYNTDYI-KKTLDVKS---IHFDSAWVPYTNFSPIYQGKCGMSG------------- 351
Query 527 AREYAEWKDSIDWEDDQQLINTRLMPDPALARVRVYSTHSTHKTLTALRQGSMIHIWDQD 586
D ++ + +Y T STHK L A Q SMIH+
Sbjct 352 --------DRVEGK-------------------IIYETQSTHKLLAAFSQASMIHVKG-- 382
Query 587 FKEKSEEAFIEAYMTHTSTSANYQILASLDVGRRQVE-MEGYQLVQRQLELAMSLREQVM 645
+ +EE F EAYM HT+TS +Y I+AS + ++ G +L+ +E A+ R+++
Sbjct 383 --DINEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIK 440
Query 646 HHPLLKRHFHFLRVGNIIPTAYRESGVNSYFDEGKGW-ANLEKAW------SMDEFVMDP 698
R+ + + + + D + W + AW + +DP
Sbjct 441 ------------RLKSESDGWFFDVWQPEHIDGAECWPLRSDSAWHGFKNIDNEHMYLDP 488
Query 699 TRATLMIGMVGMDG--DTFK-NTELMNKY----GIQINKTSRNTVLFIINIGTTRSAIAY 751
+ T++ + DG D F L+ KY GI + KT +LF+ +IG ++
Sbjct 489 IKVTILTPGMKKDGTMDEFGIPASLVAKYLDERGIIVEKTGPYNLLFLFSIGIDKTKALS 548
Query 752 LIEVLVKIAR--DVDRRVADMSSAERR-----IHLKRVNSLTQ------EQPPLPDFSAF 798
L+ L + R D++ RV ++ A R R+ L Q E LPD
Sbjct 549 LLRALTEFKRAFDLNLRVKNILPALYREAPEFYENMRIQELAQNIHKLVEHHNLPDL--M 606
Query 799 HRAFRGQSLNPAIQTRDGNIRQAFFLSYEDSSCEYIDMQEAAVAIASGRELVSALFVIPY 858
+RAF + L + T F E + ++E GR V+A ++PY
Sbjct 607 YRAF--EVLPKMVMT-----PYTAFQKELHGETEEVYLEEMV-----GR--VNANMILPY 652
Query 859 PPGFPILVPGQVISSE---ILKFMAAL 882
PPG P+++PG++I+ E +L+F+ L
Sbjct 653 PPGVPLVMPGEMITEESRPVLEFLQML 679
>P0A1Z0 Inducible lysine decarboxylase [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=714
Score = 166 bits (420), Expect = 1e-45
Identities = 166/627 (26%), Positives = 275/627 (44%), Gaps = 112/627 (18%)
Query 290 PFFNALRDYSKQPTGMFHALPLARGKAILNSNWIGDLA-QFYGMNLFMAETSATSGGLDS 348
P AL Y ++ F P G + +G + F+G N ++ S + L S
Sbjct 131 PLTKALFKYVREGKYTF-CTPGHMGGTAFQKSPVGSIFYDFFGPNTMKSDISISVSELGS 189
Query 349 LLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVVQSLVREGDIVLVDRNCHKSHH 408
LL+ GP K A+EY AR F A+R++ TNGTST NKIV G VL+DRNCHKS
Sbjct 190 LLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT 249
Query 409 YGLVLTGASAAYLDSYPLNEYSMYGAVPIWHIKQTLLSFKRAGTLDRVKLV--LLTNCTF 466
+ ++++ + Y N Y + G +P + ++ + T + V ++TN T+
Sbjct 250 HLMMMSDITPIYFRP-TRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY 308
Query 467 DGVVYDVERVMMECLAIKPDLIFLWDEAWFAFASCHPIYRQRTAMANAAKLAERFKTPEY 526
DG++Y+ + + + L +K +D AW + + PIY+ + M+
Sbjct 309 DGLLYNTDYI-KKTLDVKS---IHFDSAWVPYTNFSPIYQGKCGMSG------------- 351
Query 527 AREYAEWKDSIDWEDDQQLINTRLMPDPALARVRVYSTHSTHKTLTALRQGSMIHIWDQD 586
D ++ + +Y T STHK L A Q SMIH+
Sbjct 352 --------DRVEGK-------------------IIYETQSTHKLLAAFSQASMIHVKG-- 382
Query 587 FKEKSEEAFIEAYMTHTSTSANYQILASLDVGRRQVE-MEGYQLVQRQLELAMSLREQVM 645
+ +EE F EAYM HT+TS +Y I+AS + ++ G +L+ +E A+ R+++
Sbjct 383 --DINEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIK 440
Query 646 HHPLLKRHFHFLRVGNIIPTAYRESGVNSYFDEGKGW-ANLEKAW------SMDEFVMDP 698
R+ + + + + D + W + AW + +DP
Sbjct 441 ------------RLKSESDGWFFDVWQPEHIDGAECWPLRSDSAWHGFKNIDNEHMYLDP 488
Query 699 TRATLMIGMVGMDG--DTFK-NTELMNKY----GIQINKTSRNTVLFIINIGTTRSAIAY 751
+ T++ + DG D F L+ KY GI + KT +LF+ +IG ++
Sbjct 489 IKVTILTPGMKKDGTMDEFGIPASLVAKYLDERGIIVEKTGPYNLLFLFSIGIDKTKALS 548
Query 752 LIEVLVKIAR--DVDRRVADMSSAERR-----IHLKRVNSLTQ------EQPPLPDFSAF 798
L+ L + R D++ RV ++ A R R+ L Q E LPD
Sbjct 549 LLRALTEFKRAFDLNLRVKNILPALYREAPEFYENMRIQELAQNIHKLVEHHNLPDL--M 606
Query 799 HRAFRGQSLNPAIQTRDGNIRQAFFLSYEDSSCEYIDMQEAAVAIASGRELVSALFVIPY 858
+RAF + L + T F E + ++E GR V+A ++PY
Sbjct 607 YRAF--EVLPKMVMT-----PYTAFQKELHGETEEVYLEEMV-----GR--VNANMILPY 652
Query 859 PPGFPILVPGQVISSE---ILKFMAAL 882
PPG P+++PG++I+ E +L+F+ L
Sbjct 653 PPGVPLVMPGEMITEESRPVLEFLQML 679
>P28629 Biodegradative arginine decarboxylase [Escherichia coli
(strain K12)]
Length=755
Score = 163 bits (412), Expect = 1e-44
Identities = 154/590 (26%), Positives = 253/590 (43%), Gaps = 110/590 (19%)
Query 329 FYGMNLFMAETSATSGGLDSLLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVVQ 388
+YG NLF + L SLL+ G +++YAAR FGA R++ GTS N+ ++Q
Sbjct 180 YYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQ 239
Query 389 SLVREGDIVLVDRNCHKSHHYGLVLTGASAAYLDSYPLNEYSMYGAVPIW---------- 438
+ + + D+V+VDRNCHKS GL+LTGA Y+ N Y + G PI+
Sbjct 240 ACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVP-SRNRYGIIG--PIYPQEMQPETLQ 296
Query 439 -HIKQTLLSFKRAGTLDRVKLVLLTNCTFDGVVYDVERVMMECLAIKPDLIFLWDEAWFA 497
I ++ L+ +AG + ++TNCT+DGV Y+ + + L K +DEAW+
Sbjct 297 KKISESPLTKDKAG--QKPSYCVVTNCTYDGVCYNAKEA--QDLLEKTSDRLHFDEAWYG 352
Query 498 FASCHPIYRQRTAMANAAKLAERFKTPEYAREYAEWKDSIDWEDDQQLINTRLMPDPALA 557
+A +PIY AM R + ++
Sbjct 353 YARFNPIYADHYAM--------RGEPGDHNGP---------------------------- 376
Query 558 RVRVYSTHSTHKTLTALRQGSMIHIWDQDFKEKSEEAFIEAYMTHTSTSANYQILASLDV 617
V++THSTHK L AL Q S IH+ + + F +AYM H +TS Y I AS DV
Sbjct 377 --TVFATHSTHKLLNALSQASYIHV-REGRGAINFSRFNQAYMMHATTSPLYAICASNDV 433
Query 618 GRRQVE-MEGYQLVQRQLELAMSLRE----------------------QVMHHPLLKRHF 654
++ G L Q ++ A+ R+ +V+ P + +
Sbjct 434 AVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTY 493
Query 655 HFLRVGNIIPTAYRESGVNSYFDEGKGWANLEKAWSMDEFVMDPTRATLMIGMVGMDGDT 714
F + T ++ V + G+ ++ WSM +DP + +++ +G DG+
Sbjct 494 DFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSM----LDPIKVSILAPGMGEDGEL 549
Query 715 FKN-------TELMNKYGIQINKTSRNTVLFIINIGTTRSAIAYLIEVLVKIARDVDRRV 767
+ T + ++GI +T+ ++F+ ++G TR L+ L R D
Sbjct 550 EETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYD--- 606
Query 768 ADMSSAERRIHLKRVNSLTQEQPPLPD-----FSAFHRAFRGQSLNPA---IQTRDGNIR 819
A+ A+ L T + D F+ G LN A + + R
Sbjct 607 ANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPVAEVTPR 666
Query 820 QAFFLSYEDSSCEYIDMQEAAVAIASGRELVSALFVIPYPPGFPILVPGQ 869
+A + + D++ E + ++ IA+ VIPYPPG P+L+ G+
Sbjct 667 EA-YNAIVDNNVELVSIENLPGRIAANS-------VIPYPPGIPMLLSGE 708
>P0A9H4 Inducible lysine decarboxylase [Escherichia coli O157:H7]
Length=715
Score = 161 bits (407), Expect = 5e-44
Identities = 168/642 (26%), Positives = 280/642 (44%), Gaps = 107/642 (17%)
Query 274 ELYNAIMKGVGERYRT---PFFNALRDYSKQPTGMFHALPLARGKAILNSNWIGDLA-QF 329
++ N I + E T P AL Y ++ F P G + +G L F
Sbjct 112 DIANKIKQTTDEYINTILPPLTKALFKYVREGKYTF-CTPGHMGGTAFQKSPVGSLFYDF 170
Query 330 YGMNLFMAETSATSGGLDSLLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVVQS 389
+G N ++ S + L SLL+ GP K A++Y AR F A R++ TNGTST NKIV
Sbjct 171 FGPNTMKSDISISVSELGSLLDHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMY 230
Query 390 LVREGDIVLVDRNCHKSHHYGLVLTGASAAYLDSYPLNEYSMYGAVPIWHIKQTLLSFKR 449
G +L+DRNCHKS + ++++ + Y N Y + G +P + ++ +
Sbjct 231 SAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRP-TRNAYGILGGIPQSEFQHATIAKRV 289
Query 450 AGTLDRVKLV--LLTNCTFDGVVYDVERVMMECLAIKPDLIFLWDEAWFAFASCHPIYRQ 507
T + V ++TN T+DG++Y+ + + + L +K +D AW + + PIY
Sbjct 290 KETPNATWPVHAVITNSTYDGLLYNTD-FIKKTLDVKS---IHFDSAWVPYTNFSPIYEG 345
Query 508 RTAMANAAKLAERFKTPEYAREYAEWKDSIDWEDDQQLINTRLMPDPALARVRVYSTHST 567
+ M+ E K +Y T ST
Sbjct 346 KCGMSGGR---------------VEGK-------------------------VIYETQST 365
Query 568 HKTLTALRQGSMIHIWDQDFKEKSEEAFIEAYMTHTSTSANYQILASLDVGRRQVE-MEG 626
HK L A Q SMIH+ + +EE F EAYM HT+TS +Y I+AS + ++ G
Sbjct 366 HKLLAAFSQASMIHVKG----DVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAG 421
Query 627 YQLVQRQLELAMSLREQVMHHPLLKRHFHF--LRVGNIIPTAYRESGVNSYFDEGKGWAN 684
+L+ +E A+ R+++ + F + +I T +S + G+ N
Sbjct 422 KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTW---HGFKN 478
Query 685 LEKAWSMDEFVMDPTRATLMIGMVGMDGDTFKN--------TELMNKYGIQINKTSRNTV 736
++ + +DP + TL+ + DG T + + ++++GI + KT +
Sbjct 479 IDN----EHMYLDPIKVTLLTPGMEKDG-TMSDFGIPASIVAKYLDEHGIVVEKTGPYNL 533
Query 737 LFIINIGTTRSAIAYLIEVLV--KIARDVDRRVADMSSAERR-----IHLKRVNSLTQE- 788
LF+ +IG ++ L+ L K A D++ RV +M + R R+ L Q
Sbjct 534 LFLFSIGIDKTKALSLLRALTDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQELAQNI 593
Query 789 -----QPPLPDFSAFHRAFRGQSLNPAIQTRDGNIRQAFFLSYEDSSCEYIDMQEAAVAI 843
LPD +RAF + L + T A F E + + E
Sbjct 594 HKLIVHHNLPDL--MYRAF--EVLPTMVMT-----PYAAFQKELHGMTEEVYLDEMV--- 641
Query 844 ASGRELVSALFVIPYPPGFPILVPGQVISSE---ILKFMAAL 882
GR ++A ++PYPPG P+++PG++I+ E +L+F+ L
Sbjct 642 --GR--INANMILPYPPGVPLVMPGEMITEESRPVLEFLQML 679
>P0A9H3 Inducible lysine decarboxylase [Escherichia coli (strain
K12)]
Length=715
Score = 161 bits (407), Expect = 5e-44
Identities = 168/642 (26%), Positives = 280/642 (44%), Gaps = 107/642 (17%)
Query 274 ELYNAIMKGVGERYRT---PFFNALRDYSKQPTGMFHALPLARGKAILNSNWIGDLA-QF 329
++ N I + E T P AL Y ++ F P G + +G L F
Sbjct 112 DIANKIKQTTDEYINTILPPLTKALFKYVREGKYTF-CTPGHMGGTAFQKSPVGSLFYDF 170
Query 330 YGMNLFMAETSATSGGLDSLLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVVQS 389
+G N ++ S + L SLL+ GP K A++Y AR F A R++ TNGTST NKIV
Sbjct 171 FGPNTMKSDISISVSELGSLLDHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMY 230
Query 390 LVREGDIVLVDRNCHKSHHYGLVLTGASAAYLDSYPLNEYSMYGAVPIWHIKQTLLSFKR 449
G +L+DRNCHKS + ++++ + Y N Y + G +P + ++ +
Sbjct 231 SAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRP-TRNAYGILGGIPQSEFQHATIAKRV 289
Query 450 AGTLDRVKLV--LLTNCTFDGVVYDVERVMMECLAIKPDLIFLWDEAWFAFASCHPIYRQ 507
T + V ++TN T+DG++Y+ + + + L +K +D AW + + PIY
Sbjct 290 KETPNATWPVHAVITNSTYDGLLYNTD-FIKKTLDVKS---IHFDSAWVPYTNFSPIYEG 345
Query 508 RTAMANAAKLAERFKTPEYAREYAEWKDSIDWEDDQQLINTRLMPDPALARVRVYSTHST 567
+ M+ E K +Y T ST
Sbjct 346 KCGMSGGR---------------VEGK-------------------------VIYETQST 365
Query 568 HKTLTALRQGSMIHIWDQDFKEKSEEAFIEAYMTHTSTSANYQILASLDVGRRQVE-MEG 626
HK L A Q SMIH+ + +EE F EAYM HT+TS +Y I+AS + ++ G
Sbjct 366 HKLLAAFSQASMIHVKG----DVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAG 421
Query 627 YQLVQRQLELAMSLREQVMHHPLLKRHFHF--LRVGNIIPTAYRESGVNSYFDEGKGWAN 684
+L+ +E A+ R+++ + F + +I T +S + G+ N
Sbjct 422 KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTW---HGFKN 478
Query 685 LEKAWSMDEFVMDPTRATLMIGMVGMDGDTFKN--------TELMNKYGIQINKTSRNTV 736
++ + +DP + TL+ + DG T + + ++++GI + KT +
Sbjct 479 IDN----EHMYLDPIKVTLLTPGMEKDG-TMSDFGIPASIVAKYLDEHGIVVEKTGPYNL 533
Query 737 LFIINIGTTRSAIAYLIEVLV--KIARDVDRRVADMSSAERR-----IHLKRVNSLTQE- 788
LF+ +IG ++ L+ L K A D++ RV +M + R R+ L Q
Sbjct 534 LFLFSIGIDKTKALSLLRALTDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQELAQNI 593
Query 789 -----QPPLPDFSAFHRAFRGQSLNPAIQTRDGNIRQAFFLSYEDSSCEYIDMQEAAVAI 843
LPD +RAF + L + T A F E + + E
Sbjct 594 HKLIVHHNLPDL--MYRAF--EVLPTMVMT-----PYAAFQKELHGMTEEVYLDEMV--- 641
Query 844 ASGRELVSALFVIPYPPGFPILVPGQVISSE---ILKFMAAL 882
GR ++A ++PYPPG P+++PG++I+ E +L+F+ L
Sbjct 642 --GR--INANMILPYPPGVPLVMPGEMITEESRPVLEFLQML 679
>P21169 Constitutive ornithine decarboxylase [Escherichia coli
(strain K12)]
Length=711
Score = 155 bits (393), Expect = 3e-42
Identities = 166/663 (25%), Positives = 288/663 (43%), Gaps = 91/663 (14%)
Query 269 EEDHIELYNAIMKGVGERYRTPFFNALRDYSKQPTGMFHALPLARGKAILNSNWIG-DLA 327
E+ +EL +A + E PF++ L Y + F A P + A + G
Sbjct 82 EQQWLELESAACQ-YEENLLPPFYDTLTQYVEMGNSTF-ACPGHQHGAFFKKHPAGRHFY 139
Query 328 QFYGMNLFMAETSATSGGLDSLLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVV 387
F+G N+F A+ L LL G K AQ++AA+ F A +T+F NGTS NK+V
Sbjct 140 DFFGENVFRADMCNADVKLGDLLIHEGSAKDAQKFAAKVFHADKTYFVLNGTSAANKVVT 199
Query 388 QSLVREGDIVLVDRNCHKSHHYG-LVLTGASAAYLDSYPLNEYSMYGAVPIW-----HIK 441
+L+ GD+VL DRN HKS+H+G L+ GA+ YL++ N + G + +++
Sbjct 200 NALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEA-SRNPFGFIGGIDAHCFNEEYLR 258
Query 442 QTL--LSFKRAGTLDRVKLVLLTNCTFDGVVYDVERVMMECLAIKPDLIFLWDEAWFAFA 499
Q + ++ ++A +L ++ T+DG VY+ +V ++ + D I L+D AW +
Sbjct 259 QQIRDVAPEKADLPRPYRLAIIQLGTYDGTVYNARQV-IDTVGHLCDYI-LFDSAWVGYE 316
Query 500 SCHPIYRQRTAMANAAKLAERFKTPEYAREYAEWKDSIDWEDDQQLINTRLMPDPALARV 559
P+ MA+++ L DP
Sbjct 317 QFIPM------MADSSPLLLELNE----------------------------NDPG---- 338
Query 560 RVYSTHSTHKTLTALRQGSMIHIWDQDFKEKS----EEAFIEAYMTHTSTSANYQILASL 615
++ T S HK Q S IH D + ++ + A+M H STS Y + A+L
Sbjct 339 -IFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAAL 397
Query 616 DVGRRQVEME-GYQLVQRQLELAMSLREQVMHHPLLKRHFHFLRVGNIIPTAYRESGVNS 674
DV + E E G +L +E+ + R+ ++ L R F V + Y S + S
Sbjct 398 DVNAKIHEGESGRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDYPTSVLAS 457
Query 675 -----YFDEGKGWANLEKAWSMDEFVMDPTRATLMIGMVGMDGDTFKNTEL--------- 720
F+ G W E ++ D++ +DP + L++ G+D +T + ++
Sbjct 458 DRRFFSFEPGAKWHGFE-GYAADQYFVDPCK--LLLTTPGIDAETGEYSDFGVPATILAH 514
Query 721 -MNKYGIQINKTSRNTVLFIINIGTTRSAIAYLIEVLVKIARDV--DRRVADMSSAERRI 777
+ + GI K N++LF++ + +A L+ +L + + + D + ++ +
Sbjct 515 YLRENGIVPEKCDLNSILFLLTPAESHEKLAQLVAMLAQFEQHIEDDSPLVEVLPSVYNK 574
Query 778 HLKRVNSLTQEQPPLPDFSAFHRAFRGQSLNPAIQTRDGNIRQAFF----LSYEDSSCEY 833
+ R T Q + + +F + L A+ RQ F ++ +D+ Y
Sbjct 575 YPVRYRDYTLRQ-LCQEMHDLYVSFDVKDLQKAM------FRQQSFPSVVMNPQDAHSAY 627
Query 834 IDMQEAAVAIASGRELVSALFVIPYPPGFPILVPGQVISSEILKFMAALD--VKEIHGFR 891
I V I ++A +PYPPG +VPG+V + ++ AL+ V + GF
Sbjct 628 IRGDVELVRIRDAEGRIAAEGALPYPPGVLCVVPGEVWGGAVQRYFLALEEGVNLLPGFS 687
Query 892 PEL 894
PEL
Sbjct 688 PEL 690
>P24169 Inducible ornithine decarboxylase [Escherichia coli (strain
K12)]
Length=732
Score = 144 bits (364), Expect = 1e-38
Identities = 156/669 (23%), Positives = 290/669 (43%), Gaps = 90/669 (13%)
Query 265 IFFGEEDHIELYNAIMKGVGERYRT----PFFNALRDYSKQPTGMFHALPLARGKAILNS 320
+F E E Y ++ Y T PFF AL DY Q F P +G
Sbjct 81 VFENCESRREFYGRQLETAASHYETQLRPPFFRALVDYVNQGNSAFDC-PGHQGGEFFRR 139
Query 321 NWIGD-LAQFYGMNLFMAETSATSGGLDSLLEPVGPLKHAQEYAARAFGAKRTFFATNGT 379
+ G+ +++G LF A+ + LL G AQ++AA+ F A +T+F NGT
Sbjct 140 HPAGNQFVEYFGEALFRADLCNADVAMGDLLIHEGAPCIAQQHAAKVFNADKTYFVLNGT 199
Query 380 STCNKIVVQSLVREGDIVLVDRNCHKSHHYGLVL-TGASAAYLDSYPLNEYSMYGAVPIW 438
S+ NK+V+ +L+ GD+VL DRN HKS+H+G +L GA+ YL++ N Y G +
Sbjct 200 SSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPVYLET-ARNPYGFIGGIDAH 258
Query 439 HIKQTLL-------SFKRAGTLDRVKLVLLTNCTFDGVVYDVERVMMECLAIKPDLIFLW 491
+++ L + +RA +L ++ T+DG +Y+ +V ++ + D I L+
Sbjct 259 CFEESYLRELIAEVAPQRAKEARPFRLAVIQLGTYDGTIYNARQV-VDKIGHLCDYI-LF 316
Query 492 DEAWFAFASCHPIYRQRTAMANAAKLAERFKTPEYAREYAEWKDSIDWEDDQQLINTRLM 551
D AW + P+ MA+ + L +D ++
Sbjct 317 DSAWVGYEQFIPM------MADCSPLL------------------LDLNEN--------- 343
Query 552 PDPALARVRVYSTHSTHKTLTALRQGSMIHIWDQDFKEKS----EEAFIEAYMTHTSTSA 607
DP + T S HK Q S IH D K + + A+M H STS
Sbjct 344 -DPG-----ILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSP 397
Query 608 NYQILASLDVGRRQVE-MEGYQLVQRQLELAMSLREQVMHHPLLKRHFHFLRVGNIIPTA 666
Y + A+L++ + E + G + + ++ R+ ++ + R F V +
Sbjct 398 FYPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQS 457
Query 667 YRESGVN-----SYFDEGKGWANLEKAWSMDEFVMDPTRATLMIGMVGMDGDTFKN---- 717
Y + + F G+ W + E ++ +++ +DP + L++ G+D +
Sbjct 458 YETAQIAVDLRFFQFVPGEHWHSFE-GYAENQYFVDPCK--LLLTTPGIDARNGEYEAFG 514
Query 718 ------TELMNKYGIQINKTSRNTVLFIINIGTTRSAIAYLIEVLVKIAR--DVDRRVAD 769
+ + G+ K N++LF++ + + L+ +LV+ + + D +A+
Sbjct 515 VPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVALLVRFEKLLESDAPLAE 574
Query 770 MSSAERRIHLKRVNSLTQEQ--PPLPDFSAFHRAFRGQSLNPAIQTRDGNIRQAFFLSYE 827
+ + + H +R T Q + D A H + L + ++ R + ++ +
Sbjct 575 VLPSIYKQHEERYAGYTLRQLCQEMHDLYARHNV---KQLQKEMFRKEHFPRVS--MNPQ 629
Query 828 DSSCEYIDMQEAAVAIASGRELVSALFVIPYPPGFPILVPGQVISSEILKFMAALD--VK 885
+++ Y+ + V + ++A +PYPPG +VPG++ +L++ +AL+ +
Sbjct 630 EANYAYLRGEVELVRLPDAEGRIAAEGALPYPPGVLCVVPGEIWGGAVLRYFSALEEGIN 689
Query 886 EIHGFRPEL 894
+ GF PEL
Sbjct 690 LLPGFAPEL 698
>P44317 Ornithine decarboxylase [Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=720
Score = 132 bits (331), Expect = 1e-34
Identities = 155/664 (23%), Positives = 272/664 (41%), Gaps = 124/664 (19%)
Query 285 ERYRTPFFNALRDYSKQPTGMFHALPLARGKAILNSNWIGD-LAQFYGMNLFMAETSATS 343
E+ PFF L +Y + F P +G + G L FYG N+F ++
Sbjct 104 EKMLPPFFKMLSEYVEMGNIAFDC-PGHQGGQYYRKHPAGRFLYDFYGENIFRSDICNAD 162
Query 344 GGLDSLLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVVQSLVREGDIVLVDRNC 403
L LL G AQ+YAA+ F A +T+F NGTS+ NK+ + +++ GD+VL DRN
Sbjct 163 VKLGDLLIHEGAACDAQKYAAQVFNADKTYFVLNGTSSSNKVALNAVLAPGDLVLFDRNN 222
Query 404 HKSHHYG-LVLTGASAAYLDSYPLNEYSMYGAVPIWHIKQTLLSF-------KRAGTLDR 455
HKS+H+G L+ GA+ YL++ N + G + ++ L ++
Sbjct 223 HKSNHHGALIQAGATPIYLET-ARNPFGFIGGIDSHCFEEDYLKSLIKEVAPEKLNQKRP 281
Query 456 VKLVLLTNCTFDGVVYDVERVMMECLAIKPDLIFLWDEAWFAFASCHPIYRQRTAMANAA 515
+L ++ T+DG +Y+ +V ++ + D I L+D AW + P+ +
Sbjct 282 FRLAVIQLGTYDGTIYNARQV-VDKIGHLCDYI-LFDSAWVGYEQFIPMMK--------- 330
Query 516 KLAERFKTPEYAREYAEWKDSIDWEDDQQLINTRLMPDPALARVRVYSTHSTHKTLTALR 575
D L+ DP + T S HK
Sbjct 331 -------------------------DCSPLLLELNENDPG-----ILVTQSVHKQQAGFS 360
Query 576 QGSMIHIWDQDFKEK----SEEAFIEAYMTHTSTSANYQILASLDVGRR-QVEMEGYQLV 630
Q S IH D+ K + + + F A+M H STS Y + A+LDV + Q G +L
Sbjct 361 QTSQIHKKDKHIKGQDRYVNHKRFNNAFMLHASTSPFYPLFATLDVNAKIQGSEAGRRLW 420
Query 631 QRQLELAMSLREQVMHHPLLKRHFHFLRVGNIIPTAYRESGVNSYFDEGKGWANLE---- 686
+++ + R+ V++H L R F IPT + Y D + NLE
Sbjct 421 HECVKVGIEARKLVLNHCELIRPF--------IPTTIKGKKWQDY-DTEEIATNLEFFKF 471
Query 687 ---------KAWSMDEFVMDPTRATLMIGMVGMDGDTFKN--------TELMNKYGIQIN 729
+ ++ +++ +DP + L + ++ ++ + + GI
Sbjct 472 HPTDTWHKFEGYADEQYFVDPCKFLLTTPGISLETGEYEEFGVPATILANYLRENGIIPE 531
Query 730 KTSRNTVLFIINIGTTRSAIAYLIEVLVKIARDVDRRVADMSSAERRIHLKRVNSLTQEQ 789
K N++LF++ T + + L VA ++ E+ H+K+ + L
Sbjct 532 KCDLNSILFLLTPAETITKMQTL--------------VAQIALFEK--HIKQDSLLKYVL 575
Query 790 PPLPDFSAFHRAFRGQSLNPAIQTR-----DGNIRQ------------AFFLSYEDSSCE 832
P + + ++G ++ Q N++Q + L+ D++ E
Sbjct 576 PTV--YKNNEDRYKGYTIRQLCQEMHDLYVSRNVKQLQKDLFRKATLPEYVLNPHDANIE 633
Query 833 YIDMQEAAVAIASGRELVSALFVIPYPPGFPILVPGQVISSEILKFMAALD--VKEIHGF 890
I + V + V+A +PYPPG +VPG+ S+ ++ AL+ + + GF
Sbjct 634 LIRNKVELVPLTDIVGRVAAEGALPYPPGVLCVVPGEKWSTTAHQYFLALEEGINTLPGF 693
Query 891 RPEL 894
PE+
Sbjct 694 APEI 697
Score = 28.1 bits (61), Expect = 0.025
Identities = 15/42 (36%), Positives = 23/42 (55%), Gaps = 2/42 (5%)
Query 623 EMEGY--QLVQRQLELAMSLREQVMHHPLLKRHFHFLRVGNI 662
++ GY +L RQ+E A L E+ M P K ++ +GNI
Sbjct 82 DLNGYDIKLYSRQIETAAKLYEEKMLPPFFKMLSEYVEMGNI 123
>Q81MS2 Arginine decarboxylase [Bacillus anthracis]
Length=493
Score = 124 bits (311), Expect = 7e-33
Identities = 151/619 (24%), Positives = 251/619 (41%), Gaps = 141/619 (23%)
Query 286 RYRTPFFNALRDYSKQPTGMFHALPLARGKAILNSNWIGDLAQFYGMNLFMAETSATSGG 345
+Y TP F AL ++SK+ FH +G+ + + +F G N +A
Sbjct 6 QYETPLFTALVEHSKRNPIQFHIPGHKKGQGM-----DPEFREFIGHNA-LAIDLINIAP 59
Query 346 LDSLLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVVQSLVREGDIVLVDRNCHK 405
LD L P G +K AQ+ AA AFGA TFF+ GTS +V S+ GD +LV RN HK
Sbjct 60 LDDLHHPKGMIKEAQDLAAAAFGADHTFFSIQGTSGAIMTMVMSVCGPGDKILVPRNVHK 119
Query 406 SHHYGLVLTGASAAYLDSYPLNEYSMYGAVPIWHIKQTLLSFKRAGTLDRVKLVLLTNCT 465
S ++ +GA ++ + + + I +K+ L A K +L+ N T
Sbjct 120 SVMSAIIFSGAKPIFMHPEIDPKLGISHGITIQSVKKALEEHSDA------KGLLVINPT 173
Query 466 FDGVVYDVERVMMECLAIKPDLIFLWDEAWFAFASCHPIYRQRTAMANAAKLAERFKTPE 525
+ G D+E+++ LA D+ L DEA H ++
Sbjct 174 YFGFAADLEQIVQ--LAHSYDIPVLVDEA-------HGVH-------------------- 204
Query 526 YAREYAEWKDSIDWEDDQQLINTRLMPDPALARVRVYSTHSTHKTLTALRQGSMIHIWDQ 585
I + D+ +P A+ + S HK +L Q S++++ +
Sbjct 205 -----------IHFHDE--------LPMSAMQAGADMAATSVHKLGGSLTQSSILNVKEG 245
Query 586 DFKEKSEEAFIEAYMTHTSTSANYQILASLDVGRRQVEMEGYQLVQRQLELAMSLREQVM 645
K ++ I T+TS +Y +LASLDV R+++ EG L+++ ++LA +R +
Sbjct 246 LVNVKHVQSIISML---TTTSTSYILLASLDVARKRLATEGKALIEQTIQLAEQVRNAI- 301
Query 646 HHPLLKRHFHFLRVGNIIPTAYRESGVNSYFDEGKGWANLEKAWSMDEFVMDPTRATLMI 705
+ + + GK E + F DPT+ + +
Sbjct 302 ------------------------NDIEHLYCPGK-----EMLGTDATFNYDPTKIIVSV 332
Query 706 GMVGMDGDTFKNTELMNKYGIQINKTSRNTVLFIINIGTTRSAIAYLIEVLVKIARDVDR 765
+G+ G L +Y I++ + +L ++ G T S LI L
Sbjct 333 KDLGITGHQ-AEVWLREQYNIEVELSDLYNILCLVTFGDTESETNTLIAAL--------- 382
Query 766 RVADMSSAERRIHLKRVNSLTQEQPPLPDFSAFHRAFRGQSLNPAIQTRDGNIRQAFFLS 825
D+S+ I + + + Q +P+ +L+P R AF+
Sbjct 383 --QDLSA----IFKNKADKGVRIQVEIPEIPVL-------ALSP---------RDAFY-- 418
Query 826 YEDSSCEYIDMQEAAVAIASGRELVSALFVIPYPPGFPILVPGQVISSEILKFMAALDVK 885
S E I + AA GR + A FV+ YPPG PI PG++I+ + L+++ K
Sbjct 419 ---SETEVIPFENAA-----GR--IIADFVMVYPPGIPIFTPGEIITQDNLEYIR----K 464
Query 886 EIHGFRPELGFRVFTQETL 904
+ P G T +TL
Sbjct 465 NLEAGLPVQGPEDMTLQTL 483
>P21885 Arginine decarboxylase [Bacillus subtilis (strain 168)]
Length=490
Score = 119 bits (297), Expect = 4e-31
Identities = 144/594 (24%), Positives = 243/594 (41%), Gaps = 137/594 (23%)
Query 286 RYRTPFFNALRDYSKQPTGMFHALPLARGKAILNSNWIGDLAQFYGMNLFMAETSATSGG 345
++ TP + L+ ++ + FH +G + + QF G N +
Sbjct 3 QHETPLYTGLKKHASRQPVQFHIPGHKKGAGM-----DPEFRQFIGENALSIDLINIEP- 56
Query 346 LDSLLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVVQSLVREGDIVLVDRNCHK 405
LD L P G +K AQ+ AA AFGA TFF+ GTS +V ++ GD +++ RN HK
Sbjct 57 LDDLHAPKGIIKQAQDLAAEAFGADHTFFSVQGTSGAIMTMVMAVCGPGDKIIIPRNVHK 116
Query 406 SHHYGLVLTGASAAYLDSYPLNEYSMYGAVPIWHIKQTLLSFKRAGTLDRVKLVLLTNCT 465
S +V +GA ++ NE + + + K+ L A K +L+ N T
Sbjct 117 SIMTAIVFSGAVPIFIHPEIDNELGISHGITLESAKRALTEHPDA------KGLLVINPT 170
Query 466 FDGVVYDVERVMMECLAIKPDLIFLWDEAWFAFASCHPIYRQRTAMANAAKLAERFKTPE 525
+ GV D++ ++ LA D+ L DEA H ++
Sbjct 171 YFGVAADLKSIVE--LAHSFDVPVLVDEA-------HGVH-------------------- 201
Query 526 YAREYAEWKDSIDWEDDQQLINTRLMPDPALARVRVYSTHSTHKTLTALRQGSMIHIWDQ 585
I + D+ +P A+ + S HK +L Q S++++ +
Sbjct 202 -----------IHFHDE--------LPLSAMQAGADIAATSVHKLGGSLTQSSILNM-RE 241
Query 586 DFKEKSEEAFIEAYMTHTSTSANYQILASLDVGRRQVEMEGYQLVQRQLELAMSLREQVM 645
K I + +T TSTS Y +LASLDV R+++ EG QL + L+LA R+
Sbjct 242 GLVSKDRVQSILSMLTTTSTS--YLLLASLDVARKRLATEGRQLAEETLKLANQTRD--- 296
Query 646 HHPLLKRHFHFLRVGNIIPTAYRESGVNSYFDEGKGWANLEKAWSMDEFVMDPTRATLMI 705
R+ I EG E S + DPT+ + +
Sbjct 297 ------------RLNQI---------------EGIYCVGSEILGSKAAYSYDPTKLIISV 329
Query 706 GMVGMDGDTFKNTELMNKYGIQINKTSRNTVLFIINIGTTRSAIAYLIEVLVKIARDVDR 765
+G+ G + L + I++ + +L I G +++ L+E L +IA+ +
Sbjct 330 KSLGLTGHDVEKW-LRESFNIEVELSDLYNILCIFTPGDSQNDADRLVEALTEIAQQM-- 386
Query 766 RVADMSSAERRIHLKRVNSLTQEQPPLPDFSAFHRAFRGQSLNPAIQTRDGNIRQAFFLS 825
+E+ + ++ L E P L ++ P R AF+
Sbjct 387 -------SEQDVTHQQTEVLLPEIPLL-------------AMTP---------RDAFY-- 415
Query 826 YEDSSCEYIDMQEAAVAIASGRELVSALFVIPYPPGFPILVPGQVISSEILKFM 879
++ E I ++E ASGR + A FV+ YPPG PI +PG++I+ E + ++
Sbjct 416 ---ANTEVIPLKE-----ASGR--IIAEFVMVYPPGIPIFIPGEIITEENISYI 459
>P43099 Inducible ornithine decarboxylase [Lactobacillus sp. (strain
30a)]
Length=731
Score = 111 bits (277), Expect = 5e-28
Identities = 152/667 (23%), Positives = 262/667 (39%), Gaps = 96/667 (14%)
Query 290 PFFNALRDYSKQPTGMFHALPLARGKAILNSNWIG-DLAQFYGMNLFMAETSATSGGLDS 348
PFF +L++Y + F P +G + G + F+G +F A+ L
Sbjct 110 PFFKSLKEYVSRGLIQFDC-PGHQGGQYYRKHPAGREFYDFFGETVFRADLCNADVALGD 168
Query 349 LLEPVGPLKHAQEYAARAFGAKRTFFATNGTSTCNKIVVQSLVREGDIVLVDRNCHKS-H 407
LL GP A+++AAR + A +T+F G+S N V +LV GD+VL DRN HKS +
Sbjct 169 LLIHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVY 228
Query 408 HYGLVLTGASAAYLDSYPLNEYSMYGAVPIWHIKQ-------TLLSFKRAGTLDRVKLVL 460
+ L + G YL + N Y G + + + +RA +L +
Sbjct 229 NSALAMAGGRPVYLQT-NRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAV 287
Query 461 LTNCTFDGVVYDVERVMMECLAIKPDLIFLWDEAWFAFASCHPIYRQRTAMANAAKLAER 520
+ T+DG +Y+ V+ + + F D AW + P+ R + +
Sbjct 288 IQLGTYDGTIYNAHEVVKRIGHLCDYIEF--DSAWVGYEQFIPMMRNSSPL--------- 336
Query 521 FKTPEYAREYAEWKDSIDWEDDQQLINTRLMPDPALARVRVYSTHSTHKTLTALRQGSMI 580
LI+ DP + V+ S HK Q S I
Sbjct 337 ------------------------LIDDLGPEDPGIIVVQ-----SVHKQQAGFSQTSQI 367
Query 581 HIWDQDFKEK----SEEAFIEAYMTHTSTSANYQILASLDVGRRQVEME-GYQLVQRQLE 635
H D K + + F ++ STS Y + A+LDV E E G +L L
Sbjct 368 HKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLI 427
Query 636 LAMSLREQVMHHPLLKRHFHFLRVGNIIPTAYRESGVNS---------YFDEGKGWANLE 686
+ R++++ + R F V ++ E G F++G W E
Sbjct 428 TTIEARKKLIKAGSMFRPF----VPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYE 483
Query 687 KAWSMDEFVMDPTRATLMIGMVGMDGDTFKN--------TELMNKYGIQINKTSRNTVLF 738
+ +++ +DP + L + + +++ + +GI K+ N++LF
Sbjct 484 -GYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSDLNSILF 542
Query 739 IINIGTTRSAIAYLIEVLVKIARDVDRRV-------ADMSSAERRIHLKRVNSLTQEQPP 791
++ T + + LI L+++ R ++ + ++ E R + + L QE
Sbjct 543 LMTPAETPAKMNNLITQLLQLQRLIEEDAPLKQVLPSIYAANEERYNGYTIRELCQE--- 599
Query 792 LPDFSAFHRAFRGQSLNPAIQTRDGNIRQAFFLSYEDSSCEYIDMQEAAVAIASGRELVS 851
L DF + F Q + R+ Q L YE + E+I V + ++
Sbjct 600 LHDFYKNNNTFTYQK---RLFLREFFPEQG-MLPYE-ARQEFIRNHNKLVPLNKIEGEIA 654
Query 852 ALFVIPYPPGFPILVPGQVISSEILKFMAALD--VKEIHGFRPELGFRVFTQETLDRVLH 909
+PYPPG + PG+ S +K+ L + GF PE+ F QE D+V+
Sbjct 655 LEGALPYPPGVFCVAPGEKWSETAVKYFTILQDGINNFPGFAPEIQGVYFKQEG-DKVVA 713
Query 910 AKESFES 916
E +++
Sbjct 714 YGEVYDA 720
Lambda K H a alpha
0.323 0.136 0.403 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 7702110
Database: 187f431d235bce5e3309621576995885.SwissProt.fasta
Posted date: May 19, 2024 5:56 PM
Number of letters in database: 9,693
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
