BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: ed877cbc09647c9d19f64948dcc1eb89.TrEMBL.fasta
17 sequences; 2,994 total letters
Query= ACIAD3319
Length=181
Score E
Sequences producing significant alignments: (Bits) Value
Q6F7H3 Putative type 4 fimbrial biogenesis protein (PilV) [Acinet... 355 3e-131
A0A7G2SAK0 Type IV pilus modification protein PilV [Acinetobacter... 352 6e-130
Q9RBI8 Type IV pilus modification protein PilV [Acinetobacter bay... 352 6e-130
A0A1P8EK88 Type IV pilus modification protein PilV [Acinetobacter... 285 1e-103
A0A0M1I8M0 Pilus assembly protein PilV [Acinetobacter sp. C15] 283 8e-103
A0A427LX23 Type IV pilus modification protein PilV [Acinetobacter... 282 3e-102
N9BU83 Type IV pilus modification protein PilV [Acinetobacter sol... 281 5e-102
A0A4R0DWS7 Type IV pilus modification protein PilV [Acinetobacter... 134 4e-44
A0A808FQE5 Type IV pilus modification protein PilV [Acinetobacter... 134 5e-44
A0A8E4FB57 Type IV pilus modification protein PilV [Acinetobacter... 134 7e-44
A0A841N7Z5 Type IV pilus assembly protein PilV [Acinetobacter lwo... 133 2e-43
Q7WZP2 PilV [Pseudomonas aeruginosa] 56.2 7e-14
A0A8B6X9T2 Type IV pilus modification protein PilV [Derxia gummos... 54.3 6e-13
Q57003 PilV protein [Pseudomonas aeruginosa] 51.6 4e-12
E9KTN1 PilV [Pseudomonas aeruginosa] 48.9 4e-11
Q5SIZ6 Probable prepilin-like protein [Thermus thermophilus (stra... 43.9 1e-09
A0A8B6XCC4 Type IV pilus modification protein PilV [Derxia gummos... 39.3 9e-08
>Q6F7H3 Putative type 4 fimbrial biogenesis protein (PilV) [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=180
Score = 355 bits (912), Expect = 3e-131
Identities = 179/180 (99%), Positives = 180/180 (100%), Gaps = 0/180 (0%)
Query 1 LYMSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTE 60
+YMSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTE
Sbjct 1 MYMSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTE 60
Query 61 RMRANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLG 120
RMRANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLG
Sbjct 61 RMRANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLG 120
Query 121 MAVIINTCPNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY 180
MAVIINTCPNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY
Sbjct 121 MAVIINTCPNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY 180
>A0A7G2SAK0 Type IV pilus modification protein PilV [Acinetobacter
sp]
Length=178
Score = 352 bits (903), Expect = 6e-130
Identities = 178/178 (100%), Positives = 178/178 (100%), Gaps = 0/178 (0%)
Query 3 MSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERM 62
MSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERM
Sbjct 1 MSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERM 60
Query 63 RANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLGMA 122
RANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLGMA
Sbjct 61 RANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLGMA 120
Query 123 VIINTCPNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY 180
VIINTCPNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY
Sbjct 121 VIINTCPNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY 178
>Q9RBI8 Type IV pilus modification protein PilV [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=178
Score = 352 bits (903), Expect = 6e-130
Identities = 178/178 (100%), Positives = 178/178 (100%), Gaps = 0/178 (0%)
Query 3 MSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERM 62
MSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERM
Sbjct 1 MSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERM 60
Query 63 RANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLGMA 122
RANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLGMA
Sbjct 61 RANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLGMA 120
Query 123 VIINTCPNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY 180
VIINTCPNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY
Sbjct 121 VIINTCPNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY 178
>A0A1P8EK88 Type IV pilus modification protein PilV [Acinetobacter
soli]
Length=178
Score = 285 bits (730), Expect = 1e-103
Identities = 137/178 (77%), Positives = 159/178 (89%), Gaps = 0/178 (0%)
Query 3 MSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERM 62
M + QRGVGMVEV+VALLLLAIGVLGFTALQLRAVSASMEA NQV ALN+ARDLTERM
Sbjct 1 MKLIGPQRGVGMVEVMVALLLLAIGVLGFTALQLRAVSASMEAGNQVAALNIARDLTERM 60
Query 63 RANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLGMA 122
RANPQATQCKLYHTEG++ TKAYTKASNC+ +VS+QA+AQA SDL +IYNQ GM+
Sbjct 61 RANPQATQCKLYHTEGSINSSTKAYTKASNCATTVSSQASAQATSDLQYIYNQTTNSGMS 120
Query 123 VIINTCPNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY 180
VI+NTCPNA+NAG NLGRQC+Y+AWDKTAQ+F++S+TCYK+G +SYERN TC+FLEAY
Sbjct 121 VIVNTCPNASNAGTNLGRQCIYVAWDKTAQSFSSSETCYKNGATSYERNATCIFLEAY 178
>A0A0M1I8M0 Pilus assembly protein PilV [Acinetobacter sp. C15]
Length=178
Score = 283 bits (725), Expect = 8e-103
Identities = 135/172 (78%), Positives = 157/172 (91%), Gaps = 0/172 (0%)
Query 9 QRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERMRANPQA 68
QRGVG+VEV+VALLLLAIGVLGFTALQLRAVSASMEA NQV ALN+ARDLTERMRANPQA
Sbjct 7 QRGVGIVEVMVALLLLAIGVLGFTALQLRAVSASMEAGNQVAALNIARDLTERMRANPQA 66
Query 69 TQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLGMAVIINTC 128
TQCKLYHTEG++ TKAYTKASNC+ +VS+QA+AQA SDL +IYNQ GM+VI+NTC
Sbjct 67 TQCKLYHTEGSINSSTKAYTKASNCATTVSSQASAQATSDLQYIYNQTTNSGMSVIVNTC 126
Query 129 PNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY 180
PNA+NAG NLGRQC+Y+AWDKTAQ+F++S+TCYK+G +SYERN TC+FLEAY
Sbjct 127 PNASNAGTNLGRQCIYVAWDKTAQSFSSSETCYKNGATSYERNATCIFLEAY 178
>A0A427LX23 Type IV pilus modification protein PilV [Acinetobacter
soli]
Length=178
Score = 282 bits (721), Expect = 3e-102
Identities = 134/172 (78%), Positives = 156/172 (91%), Gaps = 0/172 (0%)
Query 9 QRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERMRANPQA 68
QRGVG+VEV+VALLLLAIGVLGFTALQLRAVSASMEA NQV ALN+ARDLTERMRANPQA
Sbjct 7 QRGVGIVEVMVALLLLAIGVLGFTALQLRAVSASMEAGNQVAALNIARDLTERMRANPQA 66
Query 69 TQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLGMAVIINTC 128
TQCKLYHTEG++ TKAYTKASNC+ +VS+QA+AQA SDL +IYNQ GM+VI+NTC
Sbjct 67 TQCKLYHTEGSINSSTKAYTKASNCATTVSSQASAQATSDLQYIYNQTTNSGMSVIVNTC 126
Query 129 PNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY 180
PNA+NAG N GRQC+Y+AWDKTAQ+F++S+TCYK+G +SYERN TC+FLEAY
Sbjct 127 PNASNAGTNFGRQCIYVAWDKTAQSFSSSETCYKNGATSYERNATCIFLEAY 178
>N9BU83 Type IV pilus modification protein PilV [Acinetobacter
soli NIPH 2899]
Length=178
Score = 281 bits (720), Expect = 5e-102
Identities = 134/172 (78%), Positives = 157/172 (91%), Gaps = 0/172 (0%)
Query 9 QRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERMRANPQA 68
QRGVG+VEV+VALLLLAIGVLGFTALQLRAVSASMEA NQV ALN+ARDLTERMRANPQA
Sbjct 7 QRGVGIVEVMVALLLLAIGVLGFTALQLRAVSASMEAGNQVAALNIARDLTERMRANPQA 66
Query 69 TQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLGMAVIINTC 128
TQCKLYHTEG++ TKAYTKASNC+ +VS+QA+AQA SDL +IYNQ GM+VI+NTC
Sbjct 67 TQCKLYHTEGSINSSTKAYTKASNCATTVSSQASAQATSDLQYIYNQTTNSGMSVIVNTC 126
Query 129 PNATNAGNNLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY 180
PNA++AG NLGRQC+Y+AWDKTAQ+F++S+TCYK+G +SYERN TC+FLEAY
Sbjct 127 PNASDAGTNLGRQCIYVAWDKTAQSFSSSETCYKNGATSYERNATCIFLEAY 178
>A0A4R0DWS7 Type IV pilus modification protein PilV [Acinetobacter
terrestris]
Length=169
Score = 134 bits (338), Expect = 4e-44
Identities = 81/179 (45%), Positives = 114/179 (64%), Gaps = 12/179 (7%)
Query 3 MSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERM 62
M +QRGVG++EVL+ALLLLAIG+LGF ALQ R++ AS E+ +V A+NLARDL ERM
Sbjct 2 MISNHSQRGVGLMEVLIALLLLAIGILGFIALQYRSLEASNESVFRVQAINLARDLAERM 61
Query 63 RANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLGMA 122
R N ++Q LY TE + A TK T C+G+V AT A+ D+ + ++A LGM
Sbjct 62 RVN--SSQLDLYKTETSDA--TKQKTATKTCTGTVECTATEIADYDVKQVSDKAVALGMT 117
Query 123 VIINTCPNATNAGNNLGRQCVYIAW-DKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY 180
+ + TC GN R C+Y+AW D +A N T++ C + G+SY +TC+ +E+Y
Sbjct 118 INMATC-----QGNLDNRNCIYVAWADTSATNGTDTTAC--TNGTSYVATSTCIVMESY 169
>A0A808FQE5 Type IV pilus modification protein PilV [Acinetobacter
junii]
Length=169
Score = 134 bits (337), Expect = 5e-44
Identities = 77/181 (43%), Positives = 118/181 (65%), Gaps = 13/181 (7%)
Query 1 LYMSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTE 60
+ M+ + Q+GVG++EVLVAL++LA+GVLGF ALQ RAV A+ EA N+V A+N+ARDL E
Sbjct 1 MLMNNISKQKGVGLIEVLVALVILAVGVLGFVALQYRAVEATSEAINRVQAMNVARDLAE 60
Query 61 RMRANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLG 120
R+RAN Y T+ A + + Y A+NC + T ++A A+ D+ + N+A++LG
Sbjct 61 RIRANRDGLAS--YKTQIQTAANQETY--ATNCITATCT-SSALADFDVSQVVNKASSLG 115
Query 121 MAVIINTCPNATNAGNNLGRQCVYIAW-DKTAQNFTNSDTCYKSGGSSYERNTTCLFLEA 179
M + + TC +GNN GR C+Y+AW D +A + T + C + G++Y +TC+ +E
Sbjct 116 MTMNMRTC-----SGNNDGRNCIYVAWGDTSATDGTGTGDC--TNGAAYNTTSTCVIMET 168
Query 180 Y 180
Y
Sbjct 169 Y 169
>A0A8E4FB57 Type IV pilus modification protein PilV [Acinetobacter
terrae]
Length=168
Score = 134 bits (336), Expect = 7e-44
Identities = 80/179 (45%), Positives = 114/179 (64%), Gaps = 12/179 (7%)
Query 3 MSKMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERM 62
M +QRGVG++EVLVALLLLAIG+LGF ALQ R++ AS E+ +V A+NLARDL ER+
Sbjct 1 MISNHSQRGVGLMEVLVALLLLAIGILGFIALQYRSLEASNESIFRVQAINLARDLAERI 60
Query 63 RANPQATQCKLYHTEGALAKDTKAYTKASNCSGSVSTQATAQANSDLLFIYNQANTLGMA 122
R N ++Q LY E + A TK T C+G+V A A+ D+ + ++A TLGM
Sbjct 61 RVN--SSQLDLYKIETSDA--TKQKTATKTCTGTVECTAAEMADYDVKQVSDKAVTLGMT 116
Query 123 VIINTCPNATNAGNNLGRQCVYIAW-DKTAQNFTNSDTCYKSGGSSYERNTTCLFLEAY 180
+ + TC GN+ R C+Y+AW D +A N T++ C + G+SY +TC+ +E+Y
Sbjct 117 INMATC-----QGNSDSRNCIYVAWADTSATNGTDTTAC--TNGTSYVATSTCIVMESY 168
>A0A841N7Z5 Type IV pilus assembly protein PilV [Acinetobacter
lwoffii]
Length=182
Score = 133 bits (334), Expect = 2e-43
Identities = 80/188 (43%), Positives = 110/188 (59%), Gaps = 19/188 (10%)
Query 5 KMRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERMRA 64
K++ Q GVG++EVLVAL+LL+IGVLGF+ LQ+RA+ AS++AS ++ A+NLARDL+ERMRA
Sbjct 2 KIKTQHGVGLMEVLVALILLSIGVLGFSILQVRAMDASLDASKRIQAMNLARDLSERMRA 61
Query 65 NPQATQCKLYHTEGALAKDTKAYTKA-----------SNCSGSVSTQATAQANSDLLFIY 113
N + TE + K AY+ A NC GS + A D+ I
Sbjct 62 NKSGLSKSITVTENEIDKLVDAYSNAMSGKYYISSHTPNCIGSTKCSSKDFAQEDVNQIL 121
Query 114 NQANTLGMAVIINTCPNATNAGN-NLGRQCVYIAWDKTAQNFTNSDTCYKSGGSSYERNT 172
+A T GM + +N CP GN +L R CVY+AW +T ++ C SG S N+
Sbjct 122 YRAYTSGMKIALNDCP-----GNMSLNRFCVYVAWGETLPKDGGTNACTNSG--SLTSNS 174
Query 173 TCLFLEAY 180
C+ LEAY
Sbjct 175 KCIVLEAY 182
>Q7WZP2 PilV [Pseudomonas aeruginosa]
Length=174
Score = 56.2 bits (134), Expect = 7e-14
Identities = 30/63 (48%), Positives = 41/63 (65%), Gaps = 0/63 (0%)
Query 6 MRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERMRAN 65
M + G M+EVLVAL+L++IGVLG A+Q R + + E+ + A LA DL E MRA+
Sbjct 1 MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRAD 60
Query 66 PQA 68
P A
Sbjct 61 PDA 63
>A0A8B6X9T2 Type IV pilus modification protein PilV [Derxia gummosa
DSM 723]
Length=208
Score = 54.3 bits (129), Expect = 6e-13
Identities = 24/59 (41%), Positives = 42/59 (71%), Gaps = 0/59 (0%)
Query 7 RAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERMRAN 65
R QRG ++EVL+ L++++IG++G LQ+ A+S + A ++ + +LA D+ +RMRAN
Sbjct 14 RQQRGFSLIEVLIVLIVVSIGLIGLAGLQVNAMSYGLTAVSRSTSASLAYDMADRMRAN 72
Score = 17.7 bits (34), Expect = 1.7
Identities = 9/23 (39%), Positives = 14/23 (61%), Gaps = 5/23 (22%)
Query 86 AYTKASNCSGSVSTQATAQANSD 108
AY+ +SNC S ++ +NSD
Sbjct 179 AYSTSSNCPTSFNS-----SNSD 196
>Q57003 PilV protein [Pseudomonas aeruginosa]
Length=185
Score = 51.6 bits (122), Expect = 4e-12
Identities = 27/60 (45%), Positives = 40/60 (67%), Gaps = 0/60 (0%)
Query 9 QRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERMRANPQA 68
Q G M+EVLVALLL++IGVLG A+Q + + + ++ + A L +L E MRA+P+A
Sbjct 12 QSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKA 71
>E9KTN1 PilV [Pseudomonas aeruginosa]
Length=185
Score = 48.9 bits (115), Expect = 4e-11
Identities = 25/60 (42%), Positives = 40/60 (67%), Gaps = 0/60 (0%)
Query 9 QRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERMRANPQA 68
+ G ++EVLVALLL++IGVLG A+Q + + + ++ + A L +L E MRA+P+A
Sbjct 12 ESGFSLIEVLVALLLVSIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKA 71
>Q5SIZ6 Probable prepilin-like protein [Thermus thermophilus (strain
ATCC 27634 / DSM 579 / HB8)]
Length=123
Score = 43.9 bits (102), Expect = 1e-09
Identities = 22/62 (35%), Positives = 39/62 (63%), Gaps = 0/62 (0%)
Query 6 MRAQRGVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERMRAN 65
M A++G+ ++EV++AL LLA+ VL FT+LQ+ ++ A + + + ER+R +
Sbjct 1 MGARKGLTLLEVILALGLLAVVVLAFTSLQVASLRAGQQGRELQTVVREMENFMERLRQD 60
Query 66 PQ 67
PQ
Sbjct 61 PQ 62
>A0A8B6XCC4 Type IV pilus modification protein PilV [Derxia gummosa
DSM 723]
Length=183
Score = 39.3 bits (90), Expect = 9e-08
Identities = 20/58 (34%), Positives = 33/58 (57%), Gaps = 0/58 (0%)
Query 11 GVGMVEVLVALLLLAIGVLGFTALQLRAVSASMEASNQVLALNLARDLTERMRANPQA 68
G ++EVLV + + A+ +LG +QL+ A + A LA +L +R+RAN +A
Sbjct 12 GFSLIEVLVTMAVSAVALLGLAGMQLQGARMQTVAGYRGTAALLASNLADRIRANEKA 69
Lambda K H a alpha
0.321 0.129 0.372 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 340560
Database: ed877cbc09647c9d19f64948dcc1eb89.TrEMBL.fasta
Posted date: May 9, 2024 9:42 PM
Number of letters in database: 2,994
Number of sequences in database: 17
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
