BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: b6dccb5ab6f7621cfcf07a45a39db8b0.TrEMBL.fasta
11 sequences; 3,863 total letters
Query= ACIAD3318
Length=323
Score E
Sequences producing significant alignments: (Bits) Value
Q9RBI7 ComB [Acinetobacter baylyi (strain ATCC 33305 / BD413 / AD... 629 0.0
A0A7G2SAN2 Prepilin-type cleavage/methylation domain-containing p... 624 0.0
N9C098 Prepilin-type N-terminal cleavage/methylation domain-conta... 493 0.0
A0A3R9A212 Prepilin-type N-terminal cleavage/methylation domain-c... 491 3e-180
A0A0M1I8I2 Pilus assembly protein PilW [Acinetobacter sp. C15] 491 4e-180
A0A1P8EK83 Prepilin-type N-terminal cleavage/methylation domain-c... 488 9e-179
N8PRU5 Prepilin-type N-terminal cleavage/methylation domain-conta... 298 7e-103
A0A3L9MDT1 Prepilin-type N-terminal cleavage/methylation domain-c... 296 1e-102
A0A3S9AYA6 Prepilin-type N-terminal cleavage/methylation domain-c... 293 5e-102
A0A4Q6XCX3 Prepilin-type N-terminal cleavage/methylation domain-c... 295 7e-102
A0A5P2U1Y2 Type 4 pilus PilW [Lysobacter enzymogenes] 47.0 2e-09
>Q9RBI7 ComB [Acinetobacter baylyi (strain ATCC 33305 / BD413
/ ADP1)]
Length=322
Score = 629 bits (1623), Expect = 0.0
Identities = 322/322 (100%), Positives = 322/322 (100%), Gaps = 0/322 (0%)
Query 1 MKISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYIL 60
MKISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYIL
Sbjct 1 MKISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYIL 60
Query 61 DDVRRANLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQ 120
DDVRRANLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQ
Sbjct 61 DDVRRANLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQ 120
Query 121 KSDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKALRCVSDQYQQTGNTITGMDN 180
KSDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKALRCVSDQYQQTGNTITGMDN
Sbjct 121 KSDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKALRCVSDQYQQTGNTITGMDN 180
Query 181 KTKTTLDLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNI 240
KTKTTLDLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNI
Sbjct 181 KTKTTLDLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNI 240
Query 241 NGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQ 300
NGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQ
Sbjct 241 NGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQ 300
Query 301 VVTQTISLRNAMGWVEEGYVTP 322
VVTQTISLRNAMGWVEEGYVTP
Sbjct 301 VVTQTISLRNAMGWVEEGYVTP 322
>A0A7G2SAN2 Prepilin-type cleavage/methylation domain-containing
protein [Acinetobacter sp]
Length=322
Score = 624 bits (1608), Expect = 0.0
Identities = 320/322 (99%), Positives = 320/322 (99%), Gaps = 0/322 (0%)
Query 1 MKISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYIL 60
MKISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYIL
Sbjct 1 MKISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYIL 60
Query 61 DDVRRANLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQ 120
DDVRRANLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQ
Sbjct 61 DDVRRANLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQ 120
Query 121 KSDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKALRCVSDQYQQTGNTITGMDN 180
KSDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDK LRCVSDQYQQTGNTITGMDN
Sbjct 121 KSDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKDLRCVSDQYQQTGNTITGMDN 180
Query 181 KTKTTLDLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNI 240
KTKTTLDLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNI
Sbjct 181 KTKTTLDLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNI 240
Query 241 NGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQ 300
NGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQ
Sbjct 241 NGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQ 300
Query 301 VVTQTISLRNAMGWVEEGYVTP 322
VVTQTISLRNAMGWVEE YVTP
Sbjct 301 VVTQTISLRNAMGWVEEVYVTP 322
>N9C098 Prepilin-type N-terminal cleavage/methylation domain-containing
protein [Acinetobacter soli NIPH 2899]
Length=322
Score = 493 bits (1269), Expect = 0.0
Identities = 249/315 (79%), Positives = 278/315 (88%), Gaps = 0/315 (0%)
Query 7 SGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYILDDVRRA 66
+GFTL+ELMVAITLGLL+TAAAIQLY+T ITS+NVQKAMS+IQDSASFGVNYIL+DVR+A
Sbjct 7 AGFTLIELMVAITLGLLITAAAIQLYLTSITSFNVQKAMSNIQDSASFGVNYILEDVRKA 66
Query 67 NLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQKSDQLT 126
NLSA SAY+NDQQ N+GL+LT+SNVS+ K LLTL + LTKSAVGD NV QKSDQLT
Sbjct 67 NLSASSAYINDQQANAGLLLTASNVSDQVSGKYLLTLAETALTKSAVGDSNVDQKSDQLT 126
Query 127 IRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKALRCVSDQYQQTGNTITGMDNKTKTTL 186
IRYQA + YDCTGKTL A TYV QRYF+GSDKALRCV+DQY +TGNTIT +D K KTTL
Sbjct 127 IRYQATQSDYDCTGKTLAAGTYVAQRYFVGSDKALRCVADQYMRTGNTITAVDGKPKTTL 186
Query 187 DLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNINGIQQS 246
DLSG GQIIIP+VDYMR+++GYVKGALNNPTA++YVS+ DYLDT KT A+ KNI+GI Q
Sbjct 187 DLSGAGQIIIPSVDYMRIKVGYVKGALNNPTALNYVSVADYLDTTKTPAMTKNIDGISQQ 246
Query 247 IKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQVVTQTI 306
IKP INVIQIGLLVQSNETAGND VRNRNK+ FDVLGQSV LN NQDTRLRQVVTQTI
Sbjct 247 IKPYINVIQIGLLVQSNETAGNDVNVRNRNKKTFDVLGQSVALNSTNQDTRLRQVVTQTI 306
Query 307 SLRNAMGWVEEGYVT 321
SLRNAMGWVEEGYVT
Sbjct 307 SLRNAMGWVEEGYVT 321
>A0A3R9A212 Prepilin-type N-terminal cleavage/methylation domain-containing
protein [Acinetobacter soli]
Length=322
Score = 491 bits (1265), Expect = 3e-180
Identities = 248/315 (79%), Positives = 277/315 (88%), Gaps = 0/315 (0%)
Query 7 SGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYILDDVRRA 66
+GFTL+ELMVAITLGLL+TAAAIQLY+T +TS+NVQKAMS+IQDSASFGVNYILDDVR+A
Sbjct 7 AGFTLIELMVAITLGLLITAAAIQLYLTSVTSFNVQKAMSNIQDSASFGVNYILDDVRKA 66
Query 67 NLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQKSDQLT 126
NLSA SAY+NDQQ N+GL+LT+SNVS+ K LLTL + LTKSAVGD NV QKSDQLT
Sbjct 67 NLSASSAYINDQQANAGLLLTASNVSDQVSGKYLLTLAETALTKSAVGDSNVDQKSDQLT 126
Query 127 IRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKALRCVSDQYQQTGNTITGMDNKTKTTL 186
IRYQA + YDCTGKTL A TYV QRYF+GSDKALRCV+DQY + GNTIT +D K KTTL
Sbjct 127 IRYQATQSDYDCTGKTLAAGTYVAQRYFVGSDKALRCVADQYMRNGNTITAVDGKPKTTL 186
Query 187 DLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNINGIQQS 246
DLSG GQIIIP+VDYMR+++GYVKGALNNPTA++YVS+ DYLDT KT A+ KNI+GI Q
Sbjct 187 DLSGAGQIIIPSVDYMRIKVGYVKGALNNPTALNYVSVADYLDTAKTPAMTKNIDGISQQ 246
Query 247 IKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQVVTQTI 306
IKP INVIQIGLLVQSNETAGND VRNRNK+ FDVLGQSV LN NQDTRLRQVVTQTI
Sbjct 247 IKPYINVIQIGLLVQSNETAGNDVNVRNRNKKTFDVLGQSVALNSTNQDTRLRQVVTQTI 306
Query 307 SLRNAMGWVEEGYVT 321
SLRNAMGWVEEGYVT
Sbjct 307 SLRNAMGWVEEGYVT 321
>A0A0M1I8I2 Pilus assembly protein PilW [Acinetobacter sp. C15]
Length=322
Score = 491 bits (1264), Expect = 4e-180
Identities = 247/315 (78%), Positives = 277/315 (88%), Gaps = 0/315 (0%)
Query 7 SGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYILDDVRRA 66
+GFTL+ELMVAITLGLL+TAAAIQLY+T +TS+NVQKAM++IQDSASFGVNYILDDVR+A
Sbjct 7 AGFTLIELMVAITLGLLITAAAIQLYLTSVTSFNVQKAMANIQDSASFGVNYILDDVRKA 66
Query 67 NLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQKSDQLT 126
NLSA SAY+NDQQ N+GL+LT+SNVS+ K LLTL + LTKSAVGD NV QKSDQLT
Sbjct 67 NLSASSAYINDQQANAGLLLTASNVSDQVSGKYLLTLAETALTKSAVGDSNVDQKSDQLT 126
Query 127 IRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKALRCVSDQYQQTGNTITGMDNKTKTTL 186
IRYQA + YDCTGKTL A TYV QRYF+GSDKALRCV+DQY + GNTIT +D K KTTL
Sbjct 127 IRYQATQSDYDCTGKTLAAGTYVAQRYFVGSDKALRCVADQYMRNGNTITAVDGKPKTTL 186
Query 187 DLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNINGIQQS 246
DLSG GQIIIP+VDYMR+++GYVKGALNNPTA++YVS+ DYLDT KT A+ KNI+GI Q
Sbjct 187 DLSGTGQIIIPSVDYMRIKVGYVKGALNNPTALNYVSVADYLDTAKTPAMTKNIDGISQQ 246
Query 247 IKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQVVTQTI 306
IKP INVIQIGLLVQSNETAGND VRNRNK+ FDVLGQSV LN NQDTRLRQVVTQTI
Sbjct 247 IKPYINVIQIGLLVQSNETAGNDVNVRNRNKKTFDVLGQSVALNSTNQDTRLRQVVTQTI 306
Query 307 SLRNAMGWVEEGYVT 321
SLRNAMGWVEEGYVT
Sbjct 307 SLRNAMGWVEEGYVT 321
>A0A1P8EK83 Prepilin-type N-terminal cleavage/methylation domain-containing
protein [Acinetobacter soli]
Length=322
Score = 488 bits (1255), Expect = 9e-179
Identities = 246/315 (78%), Positives = 276/315 (88%), Gaps = 0/315 (0%)
Query 7 SGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYILDDVRRA 66
+GFTL+ELMVAITLGLL+TAAAIQLY+T +TS+NVQKAM++IQDSASFGVNYILDDVR+A
Sbjct 7 AGFTLIELMVAITLGLLITAAAIQLYLTSVTSFNVQKAMANIQDSASFGVNYILDDVRKA 66
Query 67 NLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVSQKSDQLT 126
NLSA SAY+NDQQ N+GL+LT+SNVS+ K LLTL + LTKSAVGD NV QKSDQLT
Sbjct 67 NLSASSAYINDQQANAGLLLTASNVSDQVSGKYLLTLAETALTKSAVGDSNVDQKSDQLT 126
Query 127 IRYQAVEPGYDCTGKTLPANTYVVQRYFIGSDKALRCVSDQYQQTGNTITGMDNKTKTTL 186
IRYQA + YDCTGKTL A TYV QRYF+GSDKALRCV+DQY + GNTIT +D K KTTL
Sbjct 127 IRYQATQSDYDCTGKTLVAGTYVAQRYFVGSDKALRCVADQYMRNGNTITAVDGKPKTTL 186
Query 187 DLSGNGQIIIPNVDYMRVQLGYVKGALNNPTAMSYVSIGDYLDTNKTSAVKKNINGIQQS 246
DLSG GQIIIP+VDYMR+++GYVKGALNNPTA++YVS+ DYLDT KT + KNI+GI Q
Sbjct 187 DLSGVGQIIIPSVDYMRIKVGYVKGALNNPTALNYVSVADYLDTVKTPTMTKNIDGISQQ 246
Query 247 IKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDTRLRQVVTQTI 306
IKP INVIQIGLLVQSNETAGND VRNRNK+ FDVLGQSV LN NQDTRLRQVVTQTI
Sbjct 247 IKPYINVIQIGLLVQSNETAGNDVNVRNRNKKTFDVLGQSVALNSTNQDTRLRQVVTQTI 306
Query 307 SLRNAMGWVEEGYVT 321
SLRNAMGWVEEGYVT
Sbjct 307 SLRNAMGWVEEGYVT 321
>N8PRU5 Prepilin-type N-terminal cleavage/methylation domain-containing
protein [Acinetobacter sp. CIP-A165]
Length=418
Score = 298 bits (764), Expect = 7e-103
Identities = 165/327 (50%), Positives = 230/327 (70%), Gaps = 20/327 (6%)
Query 2 KISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYILD 61
+ R SGFTL+ELM+++ LGL++ AAAIQL+ITG+TSY +QKAMS IQDSASFG+N+I+D
Sbjct 89 RFHRVSGFTLIELMISLALGLIIVAAAIQLFITGVTSYKLQKAMSHIQDSASFGLNFIID 148
Query 62 DVRRANLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVS-Q 120
DVR+ANLS+P +NDQ SG+ILTS+NV + +D LT + G+ NV+
Sbjct 149 DVRKANLSSPIPAVNDQIAYSGIILTSNNVGSKINLNCATCFSDNKLT--SFGNANVAGL 206
Query 121 KSDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSD-----KALRCVSDQYQQTGNTI 175
+DQL IRYQA + G+DC+G TL +T+VVQRY++GS ++LRC + QY Q
Sbjct 207 TNDQLLIRYQAPQGGFDCSGNTLAKDTFVVQRYYVGSTSTDLRQSLRCQAAQYTQ----- 261
Query 176 TGMDNKTKTTLDLS---GNGQIIIPNVDYMRVQLGYVKGALNN-PTAMSYVSIGDYLDTN 231
+D ++T LS + Q+I+PNVD+ +V+LGY+ G L+N + ++Y I +Y+
Sbjct 262 AQLDLLSETDPPLSLDWQDSQVILPNVDFFQVRLGYIDGELDNADSTLAYTDIKNYM--- 318
Query 232 KTSAVKKNINGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNE 291
SA KNI+G+ Q ++P+++ IQ+G+LVQS +TAG+ SI++ RNK+ F VLG VTL
Sbjct 319 ALSAKNKNIDGVIQPVRPHVHAIQLGVLVQSADTAGSQSIIKERNKEPFQVLGTKVTLTP 378
Query 292 KNQDTRLRQVVTQTISLRNAMGWVEEG 318
QDTRLRQVV QT+SLRNAMGWV EG
Sbjct 379 TYQDTRLRQVVDQTVSLRNAMGWVTEG 405
>A0A3L9MDT1 Prepilin-type N-terminal cleavage/methylation domain-containing
protein [Acinetobacter sp. 2JN-4]
Length=383
Score = 296 bits (759), Expect = 1e-102
Identities = 162/326 (50%), Positives = 230/326 (71%), Gaps = 20/326 (6%)
Query 3 ISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYILDD 62
++ SGFTL+ELM+++ LGL++ AAAIQL+ITG+TSY +QKAMS IQDSASFG+N+I+DD
Sbjct 55 VNSRSGFTLIELMISLALGLIIVAAAIQLFITGVTSYKLQKAMSHIQDSASFGLNFIIDD 114
Query 63 VRRANLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVS-QK 121
VR+ANLS+P +NDQ SG+ILTS+NV + +D LT + G+ NV+
Sbjct 115 VRKANLSSPIPAVNDQIAYSGIILTSNNVGSKINLNCATCFSDNKLT--SFGNANVAGLT 172
Query 122 SDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSD-----KALRCVSDQYQQTGNTIT 176
+DQL IRYQA + G+DC+G TL +T+VVQRY++GS ++LRC + QY Q
Sbjct 173 NDQLLIRYQAPQGGFDCSGNTLAKDTFVVQRYYVGSTSTDLRQSLRCQAAQYTQ-----A 227
Query 177 GMDNKTKTTLDLS---GNGQIIIPNVDYMRVQLGYVKGALNN-PTAMSYVSIGDYLDTNK 232
+D ++T LS + Q+I+PNVD+ +V+LGY+ G L+N + ++Y I +Y+
Sbjct 228 QLDLLSETDPPLSLDWQDSQVILPNVDFFQVRLGYIDGELDNADSILAYTDIKNYM---A 284
Query 233 TSAVKKNINGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEK 292
SA KNI+G+ Q ++P+++ IQ+G+LVQS ++AG+ +I++ RNK+ F VLG VTL
Sbjct 285 LSAKNKNIDGVMQPVRPHVHAIQLGVLVQSADSAGSQNIIKERNKEPFQVLGTKVTLTPT 344
Query 293 NQDTRLRQVVTQTISLRNAMGWVEEG 318
QDTRLRQVV QT+SLRNAMGWV EG
Sbjct 345 YQDTRLRQVVDQTVSLRNAMGWVTEG 370
>A0A3S9AYA6 Prepilin-type N-terminal cleavage/methylation domain-containing
protein [Acinetobacter haemolyticus]
Length=327
Score = 293 bits (750), Expect = 5e-102
Identities = 162/322 (50%), Positives = 229/322 (71%), Gaps = 19/322 (6%)
Query 6 HSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYILDDVRR 65
HSGFTL+ELMV++ LGL++ AAA QL+ITG+TSY +QKAM+ IQDSASFG+N+I+DD+R+
Sbjct 4 HSGFTLIELMVSLALGLIIVAAATQLFITGLTSYKLQKAMAHIQDSASFGLNFIVDDIRK 63
Query 66 ANLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVS-QKSDQ 124
ANLS+P +NDQ SG+ILTS NV + +D LT + G+ NV+ +DQ
Sbjct 64 ANLSSPMPAVNDQIAYSGIILTSKNVGSKINLNCTACFSDNKLT--SFGNANVTGLANDQ 121
Query 125 LTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSD-----KALRCVSDQYQQTGNTITGMD 179
L IRY++ + G+DC+G T+ +T+VVQRYF+GS ++LRC + QY Q +D
Sbjct 122 LLIRYRSPQDGFDCSGNTIATDTFVVQRYFVGSTSTDLRQSLRCQAAQYTQ-----AQLD 176
Query 180 NKTKTT-LDLSGN-GQIIIPNVDYMRVQLGYVKGALNNP-TAMSYVSIGDYLDTNKTSAV 236
T+ L LS + Q+I+PNVD+ +V+LGY+ G L + ++++Y I +Y+ SA
Sbjct 177 AATEANPLLLSWSASQVILPNVDFFQVRLGYIDGELESANSSLAYTDIKNYM---ALSAK 233
Query 237 KKNINGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEKNQDT 296
KNI+G+ Q+++P+++ +QIG+LVQS ++AG+ SI+++RNKQ F VLG VTL QDT
Sbjct 234 TKNIDGVVQTVRPHVHAVQIGVLVQSADSAGHQSIIKDRNKQPFQVLGTQVTLTPTYQDT 293
Query 297 RLRQVVTQTISLRNAMGWVEEG 318
RLRQVV QTISLRNAMGWV EG
Sbjct 294 RLRQVVDQTISLRNAMGWVTEG 315
>A0A4Q6XCX3 Prepilin-type N-terminal cleavage/methylation domain-containing
protein [Acinetobacter halotolerans]
Length=404
Score = 295 bits (756), Expect = 7e-102
Identities = 161/326 (49%), Positives = 230/326 (71%), Gaps = 20/326 (6%)
Query 3 ISRHSGFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYILDD 62
++ SGFTL+ELM+++ LGL++ AAAIQL+ITG+TSY +QKAMS IQDSASFG+N+I+DD
Sbjct 76 VNSRSGFTLIELMISLALGLIIVAAAIQLFITGVTSYKLQKAMSHIQDSASFGLNFIIDD 135
Query 63 VRRANLSAPSAYMNDQQPNSGLILTSSNVSELKDNKPLLTLNDAYLTKSAVGDGNVS-QK 121
VR+ANLS+P +NDQ SG+ILTS+NV + +D LT + G+ NV+
Sbjct 136 VRKANLSSPIPAVNDQIAYSGIILTSNNVGSKINLNCATCFSDNKLT--SFGNANVAGLT 193
Query 122 SDQLTIRYQAVEPGYDCTGKTLPANTYVVQRYFIGSD-----KALRCVSDQYQQTGNTIT 176
+DQL IRYQA + G+DC+G TL +T+VVQRY++GS ++LRC + QY Q
Sbjct 194 NDQLLIRYQAPQGGFDCSGNTLAKDTFVVQRYYVGSTSTDLRQSLRCQAAQYTQ-----A 248
Query 177 GMDNKTKTTLDLS---GNGQIIIPNVDYMRVQLGYVKGALNN-PTAMSYVSIGDYLDTNK 232
+D ++T LS + Q+I+PNVD+ +V+LGY+ G L+N + ++Y I +Y+
Sbjct 249 QLDLLSETDPPLSLDWQDSQVILPNVDFFQVRLGYIDGELDNADSTLAYTDIKNYM---A 305
Query 233 TSAVKKNINGIQQSIKPNINVIQIGLLVQSNETAGNDSIVRNRNKQAFDVLGQSVTLNEK 292
SA KNI+G+ + ++P+++ IQ+G+LVQS ++AG+ +I++ RNK+ F VLG VTL
Sbjct 306 LSAKNKNIDGVMRPVRPHVHAIQLGVLVQSADSAGSQNIIKERNKEPFQVLGTKVTLTPT 365
Query 293 NQDTRLRQVVTQTISLRNAMGWVEEG 318
QDTRLRQVV QT+SLRNAMGWV EG
Sbjct 366 YQDTRLRQVVDQTVSLRNAMGWVTEG 391
>A0A5P2U1Y2 Type 4 pilus PilW [Lysobacter enzymogenes]
Length=399
Score = 47.0 bits (110), Expect = 2e-09
Identities = 18/57 (32%), Positives = 38/57 (67%), Gaps = 0/57 (0%)
Query 8 GFTLVELMVAITLGLLVTAAAIQLYITGITSYNVQKAMSSIQDSASFGVNYILDDVR 64
G +L+ELMVA+ +G ++ +Q++ T+Y + + ++ +Q++A F V+Y+ D+R
Sbjct 9 GLSLIELMVALAIGAMLVLGLLQVFSASRTAYQLSEGLARVQENARFAVDYMQRDLR 65
Score = 21.6 bits (44), Expect = 0.29
Identities = 9/18 (50%), Positives = 12/18 (67%), Gaps = 0/18 (0%)
Query 295 DTRLRQVVTQTISLRNAM 312
DTR R V TI++RN +
Sbjct 379 DTRYRAVYETTIAMRNRL 396
Lambda K H a alpha
0.315 0.131 0.362 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 936304
Database: b6dccb5ab6f7621cfcf07a45a39db8b0.TrEMBL.fasta
Posted date: May 9, 2024 9:20 AM
Number of letters in database: 3,863
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
