BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 163e31a688f0096f29b104e0861746b6.SwissProt.fasta
2 sequences; 1,114 total letters
Query= ACIAD3284
Length=185
Score E
Sequences producing significant alignments: (Bits) Value
P71378 Uncharacterized protein HI_1339/HI_1462.1 [Haemophilus inf... 36.2 3e-07
Q80VM7 Ankyrin repeat domain-containing protein 24 [Mus musculus] 35.8 1e-06
>P71378 Uncharacterized protein HI_1339/HI_1462.1 [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=129
Score = 36.2 bits (82), Expect = 3e-07
Identities = 31/119 (26%), Positives = 52/119 (44%), Gaps = 6/119 (5%)
Query 6 KPVTLAMVIGSALMLTACHKNQE-KTDTEQTSSQQQNTMKELQTPPVKTFAATPEDAHDV 64
K +TLA+V+GSAL++T C QE K E T + E + T E A +
Sbjct 6 KKLTLALVLGSALVVTGCFDKQEAKQKVEDTKQTVASVASETKDAAANTMTEVKEKAQQL 65
Query 65 AILEDFDRRFSEMNDEMEAELVKMQKNGDLTAEFERTRKRDTVHSAMQMLKALDLKTEQ 123
+ D + +E ++ + E++K + +E K A +M +A+ K Q
Sbjct 66 S--TDVKNKVAEKVEDAK-EVIKSAT--EAASEKVGEMKEAASEKASEMKEAVSEKATQ 119
>Q80VM7 Ankyrin repeat domain-containing protein 24 [Mus musculus]
Length=985
Score = 35.8 bits (81), Expect = 1e-06
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query 36 SSQQQNTMKELQTPPVKTFAATPEDAHDVAILEDFDRRFSEMNDEMEAELVKMQKNGDLT 95
S + + LQ + E V ILE+F++ ++M +E +AE+V + L
Sbjct 407 SPSAEEIVASLQEQVAQLTRQNQELLEKVQILEEFEKDEAQMAEESQAEVVPLVLYESLR 466
Query 96 AEFERTRKR--DTVHSAMQMLKALDLKTEQG 124
AE E+ R++ + +HS Q + + ++G
Sbjct 467 AELEQLRRQYTEAMHSQQQQQEGEPPRAQEG 497
Score = 18.1 bits (35), Expect = 0.56
Identities = 20/73 (27%), Positives = 32/73 (44%), Gaps = 11/73 (15%)
Query 25 KNQEKTDTEQTSSQQQNTMKELQTPPVKTFAATPEDAHDVAILEDFDRRFSEMNDEMEAE 84
K +EK + Q+ + L+ T ++DVA L+D + EM D A+
Sbjct 350 KQEEKESLGREVESLQSRLSLLENERENT-------SYDVATLQDEE---GEMPDFPGAD 399
Query 85 LVKMQKNGDLTAE 97
+ M KN +AE
Sbjct 400 AL-MPKNQSPSAE 411
Score = 16.9 bits (32), Expect = 1.3
Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 18/67 (27%)
Query 15 GSALMLTACHKNQEKT---------DTEQTSSQQQNTMKELQ---------TPPVKTFAA 56
G L+L H++ ++ D+ + SSQ + E Q PP T
Sbjct 229 GDKLILQLLHESARRSSPPSASLEEDSGEASSQNSVSSHEKQGAPKKRKAPQPPASTPVP 288
Query 57 TPEDAHD 63
DA++
Sbjct 289 DDRDAYE 295
Score = 15.0 bits (27), Expect = 5.3
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 14/79 (18%)
Query 83 AELVKMQKNGDLTAEFERTRKRDTVHSAMQMLKALDLKTEQGRYIQGLFYQYWENQAKIY 142
AE++ ++ G T E +DT T+ Q +Q E
Sbjct 665 AEVIGVKVTGVQTTAIEAIGVKDT--------------TQVATGAQADCWQATEADCTGA 710
Query 143 QNTDTSSAASQTSASPTTQ 161
Q+T +Q + + TT+
Sbjct 711 QDTAMEPTGAQATVTETTE 729
Lambda K H a alpha
0.316 0.126 0.356 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 160650
Database: 163e31a688f0096f29b104e0861746b6.SwissProt.fasta
Posted date: May 19, 2024 11:31 PM
Number of letters in database: 1,114
Number of sequences in database: 2
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
