BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: bff93832c523d294340fe0dea8e2e25c.SwissProt.fasta
1 sequences; 558 total letters
Query= ACIAD3240
Length=99
Score E
Sequences producing significant alignments: (Bits) Value
P53059 Alpha-1,3-mannosyltransferase MNT2 [Saccharomyces cerevisi... 32.3 1e-06
>P53059 Alpha-1,3-mannosyltransferase MNT2 [Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)]
Length=558
Score = 32.3 bits (72), Expect = 1e-06
Identities = 17/78 (22%), Positives = 41/78 (53%), Gaps = 0/78 (0%)
Query 7 NQQLLLSGKIDFDNAQTVYQDGLRLIQQHQQFPLVVNLSELQHGSTLALAVLVQWLRQTP 66
N Q L S I+FD + +++ L + Q +V++ S++Q T+ L ++++++
Sbjct 144 NHQFLRSKPINFDTGLSFWENWLHTVTQSGSKGIVISASDVQLNETIRLLKVLRFIKNDY 203
Query 67 NAKGLHFENVPEKMLKII 84
+ +H ++ + +K I
Sbjct 204 PIQIVHNADLSQDSMKSI 221
Score = 17.3 bits (33), Expect = 0.20
Identities = 5/11 (45%), Positives = 8/11 (73%), Gaps = 0/11 (0%)
Query 88 HLQDDLTLLHR 98
HL+ L +LH+
Sbjct 363 HLESGLVILHK 373
Lambda K H a alpha
0.330 0.142 0.421 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 41272
Database: bff93832c523d294340fe0dea8e2e25c.SwissProt.fasta
Posted date: May 20, 2024 1:43 AM
Number of letters in database: 558
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
