BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 6502780b4d395c4f34bfa9bb534eda07.TrEMBL.fasta
12 sequences; 2,535 total letters
Query= ACIAD3236
Length=214
Score E
Sequences producing significant alignments: (Bits) Value
Q6F7P6 Putative DNA transformation protein (ComF) [Acinetobacter ... 436 3e-162
A0A7G2SHL4 ComF family protein [Acinetobacter sp] 436 3e-162
A0A3A8EDH2 ComF family protein [Acinetobacter guerrae] 276 1e-98
N9C473 Phosphoribosyltransferase domain-containing protein [Acine... 272 2e-97
A0A3R9C6U1 ComF family protein [Acinetobacter sp. FDAARGOS_515] 272 2e-97
A0A7T9Z8J0 ComF family protein [Acinetobacter ursingii] 271 7e-97
A0A009Z775 Phosphoribosyl transferase domain protein [Acinetobact... 267 3e-95
A0A427LX94 ComF family protein [Acinetobacter soli] 266 7e-95
A0A0M1I800 DNA transformation protein [Acinetobacter sp. C15] 266 1e-94
A0A1P8EK25 Amidophosphoribosyltransferase [Acinetobacter soli] 266 1e-94
Q5D8D4 ComF [Haemophilus influenzae] 78.6 2e-21
B0M0H5 ComF [Serratia sp. SES-01] 40.8 2e-08
>Q6F7P6 Putative DNA transformation protein (ComF) [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=213
Score = 436 bits (1122), Expect = 3e-162
Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)
Query 1 MLMSNLLATTLQWLKKECVPCPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAA 60
MLMSNLLATTLQWLKKECVPCPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAA
Sbjct 1 MLMSNLLATTLQWLKKECVPCPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAA 60
Query 61 CEYRYPIDQIVQQFKYHDRLHYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSL 120
CEYRYPIDQIVQQFKYHDRLHYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSL
Sbjct 61 CEYRYPIDQIVQQFKYHDRLHYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSL 120
Query 121 LLAQSIAKHLNVPVWQPVERLAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDD 180
LLAQSIAKHLNVPVWQPVERLAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDD
Sbjct 121 LLAQSIAKHLNVPVWQPVERLAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDD 180
Query 181 VVTTGSSIHALTHVLQNLGCVHIYPVCIAAVFD 213
VVTTGSSIHALTHVLQNLGCVHIYPVCIAAVFD
Sbjct 181 VVTTGSSIHALTHVLQNLGCVHIYPVCIAAVFD 213
>A0A7G2SHL4 ComF family protein [Acinetobacter sp]
Length=213
Score = 436 bits (1122), Expect = 3e-162
Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)
Query 1 MLMSNLLATTLQWLKKECVPCPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAA 60
MLMSNLLATTLQWLKKECVPCPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAA
Sbjct 1 MLMSNLLATTLQWLKKECVPCPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAA 60
Query 61 CEYRYPIDQIVQQFKYHDRLHYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSL 120
CEYRYPIDQIVQQFKYHDRLHYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSL
Sbjct 61 CEYRYPIDQIVQQFKYHDRLHYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSL 120
Query 121 LLAQSIAKHLNVPVWQPVERLAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDD 180
LLAQSIAKHLNVPVWQPVERLAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDD
Sbjct 121 LLAQSIAKHLNVPVWQPVERLAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDD 180
Query 181 VVTTGSSIHALTHVLQNLGCVHIYPVCIAAVFD 213
VVTTGSSIHALTHVLQNLGCVHIYPVCIAAVFD
Sbjct 181 VVTTGSSIHALTHVLQNLGCVHIYPVCIAAVFD 213
>A0A3A8EDH2 ComF family protein [Acinetobacter guerrae]
Length=226
Score = 276 bits (706), Expect = 1e-98
Identities = 133/213 (62%), Positives = 161/213 (76%), Gaps = 0/213 (0%)
Query 1 MLMSNLLATTLQWLKKECVPCPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAA 60
M M + TLQ L ++ +PC LCE SP+ K +LCK CWQ+LPW K + RHEL I+AA
Sbjct 1 MPMFDYFKATLQQLGQKILPCRLCESSPRLKHYVLCKSCWQQLPWLKQPINRHELQIMAA 60
Query 61 CEYRYPIDQIVQQFKYHDRLHYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSL 120
C Y YPID+I+QQFKY +LH+Q LL LL + P+VQAIVPMPIS+ RLIERGYNQSL
Sbjct 61 CYYHYPIDRILQQFKYEQKLHHQPLLDQLLAQIKHPKVQAIVPMPISDTRLIERGYNQSL 120
Query 121 LLAQSIAKHLNVPVWQPVERLAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDD 180
LLAQ +AK LNVP+WQP+ RL QHSQKGL+R ERI I++QF+V + K RYR+V+I+DD
Sbjct 121 LLAQQLAKKLNVPIWQPIHRLEQHSQKGLNRFERIQGIEQQFVVLEKPKIRYRKVLIIDD 180
Query 181 VVTTGSSIHALTHVLQNLGCVHIYPVCIAAVFD 213
VVTTGSSI+AL LQ LGC IY CIAAV D
Sbjct 181 VVTTGSSIYALHQALQLLGCQQIYACCIAAVTD 213
>N9C473 Phosphoribosyltransferase domain-containing protein [Acinetobacter
ursingii ANC 3649]
Length=217
Score = 272 bits (696), Expect = 2e-97
Identities = 129/210 (61%), Positives = 162/210 (77%), Gaps = 0/210 (0%)
Query 1 MLMSNLLATTLQWLKKECVPCPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAA 60
M M + + ++Q L ++ +PC LCE SP+ KQ +LCK CWQ+LPW K + RHEL I+AA
Sbjct 1 MPMFDNIKASMQQLGQKLLPCRLCESSPRLKQYVLCKSCWQQLPWLKQPIHRHELQIMAA 60
Query 61 CEYRYPIDQIVQQFKYHDRLHYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSL 120
C Y YPID+I+QQFKY +LH+Q LL LL + P+VQAIVPMPISE RLIERGYNQSL
Sbjct 61 CYYDYPIDRILQQFKYEQKLHHQPLLDQLLAQMKYPKVQAIVPMPISEARLIERGYNQSL 120
Query 121 LLAQSIAKHLNVPVWQPVERLAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDD 180
LLAQ +AK LN+PVWQP+ RL QHSQKGL+R+ERI I++QF++ + + RYR+V+I+DD
Sbjct 121 LLAQQLAKKLNIPVWQPIHRLEQHSQKGLNRIERIQGIEQQFVLLEKPQIRYRKVLIIDD 180
Query 181 VVTTGSSIHALTHVLQNLGCVHIYPVCIAA 210
VVTTGSSI+AL LQ LGC IY CIAA
Sbjct 181 VVTTGSSIYALHQALQQLGCQQIYACCIAA 210
>A0A3R9C6U1 ComF family protein [Acinetobacter sp. FDAARGOS_515]
Length=217
Score = 272 bits (696), Expect = 2e-97
Identities = 129/210 (61%), Positives = 162/210 (77%), Gaps = 0/210 (0%)
Query 1 MLMSNLLATTLQWLKKECVPCPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAA 60
M M + + ++Q L ++ +PC LCE SP+ KQ +LCK CWQ+LPW K + RHEL I+AA
Sbjct 1 MPMFDNIKASMQQLGQKLLPCRLCESSPRLKQYVLCKSCWQQLPWLKQPIHRHELQIMAA 60
Query 61 CEYRYPIDQIVQQFKYHDRLHYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSL 120
C Y YPID+I+QQFKY +LH+Q LL LL + P+VQAIVPMPISE RLIERGYNQSL
Sbjct 61 CYYDYPIDRILQQFKYEQKLHHQPLLDQLLAQMKYPKVQAIVPMPISEARLIERGYNQSL 120
Query 121 LLAQSIAKHLNVPVWQPVERLAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDD 180
LLAQ +AK LN+PVWQP+ RL QHSQKGL+R+ERI I++QF++ + + RYR+V+I+DD
Sbjct 121 LLAQQLAKKLNIPVWQPIHRLEQHSQKGLNRIERIQGIEQQFVLLEKPQIRYRKVLIIDD 180
Query 181 VVTTGSSIHALTHVLQNLGCVHIYPVCIAA 210
VVTTGSSI+AL LQ LGC IY CIAA
Sbjct 181 VVTTGSSIYALHQALQQLGCQQIYACCIAA 210
>A0A7T9Z8J0 ComF family protein [Acinetobacter ursingii]
Length=216
Score = 271 bits (693), Expect = 7e-97
Identities = 129/208 (62%), Positives = 160/208 (77%), Gaps = 0/208 (0%)
Query 3 MSNLLATTLQWLKKECVPCPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAACE 62
M + + ++Q L ++ +PC LCE SP+ K +LCK CWQ+LPW K + RHEL I+AAC
Sbjct 1 MFDNIKASMQQLGQKLLPCRLCESSPRLKHYVLCKSCWQQLPWLKQPIHRHELQIMAACY 60
Query 63 YRYPIDQIVQQFKYHDRLHYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSLLL 122
Y YPID+I+QQFKY +LH+Q LL LL + P+VQAIVPMPIS+ RLIERGYNQSLLL
Sbjct 61 YHYPIDRILQQFKYEQKLHHQPLLDQLLAQVRHPKVQAIVPMPISDARLIERGYNQSLLL 120
Query 123 AQSIAKHLNVPVWQPVERLAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDDVV 182
AQ +AK LNVP+WQP+ RL QHSQKGL+RLERI I++QF+V + K RYR+V+I+DDVV
Sbjct 121 AQQLAKKLNVPIWQPIHRLEQHSQKGLNRLERIQGIEQQFVVLEKPKIRYRKVLIIDDVV 180
Query 183 TTGSSIHALTHVLQNLGCVHIYPVCIAA 210
TTGSSI+AL LQ LGC IY CIAA
Sbjct 181 TTGSSIYALHQALQQLGCQQIYACCIAA 208
>A0A009Z775 Phosphoribosyl transferase domain protein [Acinetobacter
sp. 479375]
Length=216
Score = 267 bits (682), Expect = 3e-95
Identities = 125/204 (61%), Positives = 158/204 (77%), Gaps = 0/204 (0%)
Query 7 LATTLQWLKKECVPCPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAACEYRYP 66
+ ++Q L ++ +PC LC+ SP+ K +LCK CWQ+LPW K + RHEL I+AAC Y YP
Sbjct 5 IKASMQQLGQKLLPCRLCKSSPRLKHYVLCKSCWQQLPWLKQPIHRHELQIMAACYYDYP 64
Query 67 IDQIVQQFKYHDRLHYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSLLLAQSI 126
ID+I+QQFKY +LH+Q LL LL + P+VQAIVPMPISE RLIERGYNQSLLLAQ +
Sbjct 65 IDRILQQFKYEQKLHHQPLLDQLLAQMKYPKVQAIVPMPISEARLIERGYNQSLLLAQQL 124
Query 127 AKHLNVPVWQPVERLAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDDVVTTGS 186
AK LN+PVWQP+ RL QHSQKGL+R+ERI I++QF++ + + RYR+V+I+DDVVTTGS
Sbjct 125 AKKLNLPVWQPIHRLEQHSQKGLNRIERIQGIEQQFVLLEKPQIRYRKVLIIDDVVTTGS 184
Query 187 SIHALTHVLQNLGCVHIYPVCIAA 210
SI+AL LQ LGC IY CIAA
Sbjct 185 SIYALHQALQQLGCQQIYACCIAA 208
>A0A427LX94 ComF family protein [Acinetobacter soli]
Length=218
Score = 266 bits (680), Expect = 7e-95
Identities = 124/190 (65%), Positives = 152/190 (80%), Gaps = 0/190 (0%)
Query 21 CPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAACEYRYPIDQIVQQFKYHDRL 80
CPLC S ++C DCWQ+LPW D V RHELNI AACEY PI+QIVQQFKYH++L
Sbjct 21 CPLCGHSAAHSPYVICTDCWQDLPWLNDSVLRHELNIQAACEYADPINQIVQQFKYHEKL 80
Query 81 HYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSLLLAQSIAKHLNVPVWQPVER 140
H+Q LL+ L+L LPLPRVQAIVPMPIS RL ERGYNQ++L+A+ +AK LN+P+WQPV R
Sbjct 81 HHQRLLTQLILQLPLPRVQAIVPMPISTARLCERGYNQAMLIAEGVAKQLNLPIWQPVLR 140
Query 141 LAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDDVVTTGSSIHALTHVLQNLGC 200
A+H+QKGLSRLERI+ I++QF+ V+ R+RRVMI+DDVVTTGSSI+AL+ L LGC
Sbjct 141 RAEHTQKGLSRLERIAGIEQQFVPDLRVRTRFRRVMIIDDVVTTGSSIYALSQALTTLGC 200
Query 201 VHIYPVCIAA 210
IYPVC+AA
Sbjct 201 QRIYPVCVAA 210
>A0A0M1I800 DNA transformation protein [Acinetobacter sp. C15]
Length=218
Score = 266 bits (679), Expect = 1e-94
Identities = 123/190 (65%), Positives = 152/190 (80%), Gaps = 0/190 (0%)
Query 21 CPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAACEYRYPIDQIVQQFKYHDRL 80
CPLC S ++C DCWQ+LPW D V RHELNI AACEY PI+QIVQQFKYH++L
Sbjct 21 CPLCGHSAAHSPYVICTDCWQDLPWLNDSVLRHELNIQAACEYADPINQIVQQFKYHEKL 80
Query 81 HYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSLLLAQSIAKHLNVPVWQPVER 140
H+Q LL+ L+L LPLPRVQAIVPMPIS RL ERGYNQ++L+A+ +AK LN+P+WQPV R
Sbjct 81 HHQRLLTQLILQLPLPRVQAIVPMPISTARLCERGYNQAMLIAEGVAKQLNLPIWQPVLR 140
Query 141 LAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDDVVTTGSSIHALTHVLQNLGC 200
A+H+QKGLSRLERI+ I++QF+ V+ R+RRVMI+DDVVTTGSSI+AL+ L LGC
Sbjct 141 RAEHTQKGLSRLERIAGIEQQFVPDLRVRTRFRRVMIIDDVVTTGSSIYALSQALTTLGC 200
Query 201 VHIYPVCIAA 210
IYP+C+AA
Sbjct 201 QRIYPICVAA 210
>A0A1P8EK25 Amidophosphoribosyltransferase [Acinetobacter soli]
Length=218
Score = 266 bits (679), Expect = 1e-94
Identities = 123/190 (65%), Positives = 152/190 (80%), Gaps = 0/190 (0%)
Query 21 CPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAACEYRYPIDQIVQQFKYHDRL 80
CPLC S ++C DCWQ+LPW D V RHELNI AACEY PI+QIVQQFKYH++L
Sbjct 21 CPLCGHSAAHSPYVICTDCWQDLPWLNDSVLRHELNIQAACEYADPINQIVQQFKYHEKL 80
Query 81 HYQSLLSSLLLTLPLPRVQAIVPMPISEKRLIERGYNQSLLLAQSIAKHLNVPVWQPVER 140
H+Q LL+ L+L LPLPRVQAIVPMPIS RL ERGYNQ++L+A+ +AK LN+P+WQPV R
Sbjct 81 HHQRLLTQLILQLPLPRVQAIVPMPISTARLCERGYNQAMLIAEGVAKQLNLPIWQPVLR 140
Query 141 LAQHSQKGLSRLERISQIDEQFIVRQPVKERYRRVMIVDDVVTTGSSIHALTHVLQNLGC 200
A+H+QKGLSRLERI+ I++QF+ V+ R+RRVMI+DDVVTTGSSI+AL+ L LGC
Sbjct 141 RAEHTQKGLSRLERIAGIEQQFVPDLRVRTRFRRVMIIDDVVTTGSSIYALSQALTTLGC 200
Query 201 VHIYPVCIAA 210
IYP+C+AA
Sbjct 201 QRIYPICVAA 210
>Q5D8D4 ComF [Haemophilus influenzae]
Length=228
Score = 78.6 bits (192), Expect = 2e-21
Identities = 53/180 (29%), Positives = 95/180 (53%), Gaps = 21/180 (12%)
Query 36 CKDCWQELP-WFKDYVTRHELNILAACEYRYPIDQIVQQFKYHDRLHYQSLLSSLLL--- 91
C +C ++ P W K + H Y P+ ++ +FK+ ++ L+ LL
Sbjct 50 CGNCLKQEPSWDKMVIIGH---------YIEPLSILIHRFKFQNQFWIDRTLARLLYLAV 100
Query 92 -----TLPLPRVQAIVPMPISEKRLIERGYNQSLLLAQSIAKHLNVPVWQPVERLAQHS- 145
T L +AI+P+P+ R RGYNQ+ LL++ +++ L++P + + +H+
Sbjct 101 RDAKRTHQLKLPEAIIPVPLYHFRQWRRGYNQADLLSRQLSRWLDIPNLSNIVKRVKHTY 160
Query 146 -QKGLSRLERISQIDEQF-IVRQPVKERYRRVMIVDDVVTTGSSIHALTHVLQNLGCVHI 203
Q+GLS +R + F +V + YRRV +VDDV+TTGS+++ ++ +L+ LG I
Sbjct 161 TQRGLSAKDRRQNLKNAFSLVVSKNEFPYRRVALVDDVITTGSTLNEISKLLRKLGVEEI 220
>B0M0H5 ComF [Serratia sp. SES-01]
Length=135
Score = 40.8 bits (94), Expect = 2e-08
Identities = 31/107 (29%), Positives = 49/107 (46%), Gaps = 17/107 (16%)
Query 21 CPLCELSPQQKQQILCKDCWQELPWFKDYVTRHELNILAACEYRYPIDQIVQQFKYHDRL 80
CP C L P ++ C C Q+ P ++ V ++ Y P+ Q++++FK+
Sbjct 37 CPRCGL-PAGDARLPCGRCLQQPPPWQALVFVND--------YAAPLRQLIKKFKFQHTP 87
Query 81 HYQSLLSSLLLT--------LPLPRVQAIVPMPISEKRLIERGYNQS 119
LL+ L+L L R I+ +P+ KR RGYNQS
Sbjct 88 ELAPLLARLILLNWQQAHREQYLNRPDIILAVPLQAKRCWRRGYNQS 134
Lambda K H a alpha
0.328 0.139 0.440 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 365904
Database: 6502780b4d395c4f34bfa9bb534eda07.TrEMBL.fasta
Posted date: May 9, 2024 7:34 AM
Number of letters in database: 2,535
Number of sequences in database: 12
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
