BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: cd9f294ce0c8b3d0777f4b8345c90feb.SwissProt.fasta
           2 sequences; 572 total letters



Query= ACIAD3234

Length=294
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

B2FI29 2-alkyl-3-oxoalkanoate reductase [Stenotrophomonas maltoph...  40.0    5e-08
B9DP24 4-hydroxy-tetrahydrodipicolinate reductase [Staphylococcus...  34.7    2e-06


>B2FI29 2-alkyl-3-oxoalkanoate reductase [Stenotrophomonas maltophilia 
(strain K279a)]
Length=330

 Score = 40.0 bits (92),  Expect = 5e-08
 Identities = 58/236 (25%), Positives = 95/236 (40%), Gaps = 25/236 (11%)

Query  29   GYGKTSQRIAKHLFAQGHQITAVSRHPKPQDFVTHLTQ---DIH--QLNLDQCSPIDWVY  83
            G G   Q + + L  +GHQ+ A +R   P+  V  + Q   D+   Q  L   + +D V+
Sbjct  8    GGGFLGQALCRGLVERGHQVLAFNRSHYPELQVMGVGQIRGDLADPQAVLHAVAGVDAVF  67

Query  84   VLLAPENS--DAQSYKHTYLDSVQPIARALATHPVKRVVVVSSTRV-YGQQQAGEIVNDQ  140
               A   +     SY    +     +  A   H + R+V  S+  V +      E +   
Sbjct  68   HNGAKAGAWGSYDSYHQANVIGTDNVIAACRAHGIGRLVYTSTPSVTHRATHPVEGLGAD  127

Query  141  TIAKPVDQQGAYLLEMEEAWQNAFAEH-----CTIIRPSGIYGNS----ISRMVKLAKNT  191
             +    D Q  Y      A Q   A +        +RP  I+G      + R+ + A+  
Sbjct  128  EVPYGEDFQAPYAATKAIAEQRVLAANDASLATVALRPRLIWGPGDQQLVPRLAERARQG  187

Query  192  TEYPVIHYSNRI---HIED--LARFLAFMTQMP---CCQPSYLISDGHPYPLHEII  239
                V   SN++   +I++  LA FLAF    P   C   +Y IS+G P P+ E++
Sbjct  188  RLRLVGDGSNKVDTTYIDNAALAHFLAFEALAPGAACAGKAYFISNGEPLPMRELV  243


 Score = 15.0 bits (27),  Expect = 4.3
 Identities = 10/37 (27%), Positives = 15/37 (41%), Gaps = 5/37 (14%)

Query  87   APENSDAQSYKHTY-----LDSVQPIARALATHPVKR  118
            AP    A S+K  Y      + + P+ R     P+ R
Sbjct  252  APRVDKAISFKTAYRIGAICERLWPLLRLRGEPPLTR  288


>B9DP24 4-hydroxy-tetrahydrodipicolinate reductase [Staphylococcus 
carnosus (strain TM300)]
Length=242

 Score = 34.7 bits (78),  Expect = 2e-06
 Identities = 15/29 (52%), Positives = 20/29 (69%), Gaps = 0/29 (0%)

Query  23  MHILFIGYGKTSQRIAKHLFAQGHQITAV  51
           M IL IGYG  +QR+A+    QGH+IT +
Sbjct  1   MKILLIGYGAMNQRVARLAEEQGHEITGI  29


 Score = 17.7 bits (34),  Expect = 0.58
 Identities = 12/42 (29%), Positives = 19/42 (45%), Gaps = 4/42 (10%)

Query  25   ILFIGYGKTSQRI----AKHLFAQGHQITAVSRHPKPQDFVT  62
            +LF G  +T +      +K +FA G    A     KP+ + T
Sbjct  195  VLFAGVDETIELTHRAQSKDIFANGALKAAERLVTKPKGYYT  236



Lambda      K        H        a         alpha
   0.324    0.137    0.423    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 134130


  Database: cd9f294ce0c8b3d0777f4b8345c90feb.SwissProt.fasta
    Posted date:  May 9, 2024  7:17 AM
  Number of letters in database: 572
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40