Comparative Genomics

ACIAD3211 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 764f8df47958570ca462826a4c24efff.SwissProt.fasta
           37 sequences; 2,961 total letters



Query= ACIAD3211

Length=66
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6F7S0 Large ribosomal subunit protein uL29 [Acinetobacter baylyi...  125     7e-44
B0V6X6 Large ribosomal subunit protein uL29 [Acinetobacter bauman...  122     1e-42
A3M976 Large ribosomal subunit protein uL29 [Acinetobacter bauman...  122     1e-42
B0VQS6 Large ribosomal subunit protein uL29 [Acinetobacter bauman...  122     1e-42
B2HZA0 Large ribosomal subunit protein uL29 [Acinetobacter bauman...  122     1e-42
B7IA31 Large ribosomal subunit protein uL29 [Acinetobacter bauman...  122     1e-42
A5WCJ8 Large ribosomal subunit protein uL29 [Psychrobacter sp. (s...  84.0    3e-27
Q1QDH8 Large ribosomal subunit protein uL29 [Psychrobacter cryoha...  80.9    5e-26
Q4FUE8 Large ribosomal subunit protein uL29 [Psychrobacter arctic...  80.9    5e-26
Q0VSJ5 Large ribosomal subunit protein uL29 [Alcanivorax borkumen...  68.6    3e-21
Q87T05 Large ribosomal subunit protein uL29 [Vibrio parahaemolyti...  67.0    1e-20
A7N0I5 Large ribosomal subunit protein uL29 [Vibrio campbellii (s...  66.6    2e-20
Q6LVA8 Large ribosomal subunit protein uL29 [Photobacterium profu...  65.5    6e-20
Q7MPI0 Large ribosomal subunit protein uL29 [Vibrio vulnificus (s...  65.5    6e-20
Q8DE47 Large ribosomal subunit protein uL29 [Vibrio vulnificus (s...  65.5    6e-20
C3LRQ0 Large ribosomal subunit protein uL29 [Vibrio cholerae sero...  65.5    6e-20
Q9KNZ2 Large ribosomal subunit protein uL29 [Vibrio cholerae sero...  65.5    6e-20
A5F558 Large ribosomal subunit protein uL29 [Vibrio cholerae sero...  65.5    6e-20
Q0I097 Large ribosomal subunit protein uL29 [Shewanella sp. (stra...  65.1    8e-20
Q0HNS9 Large ribosomal subunit protein uL29 [Shewanella sp. (stra...  65.1    8e-20
A0KRN2 Large ribosomal subunit protein uL29 [Shewanella sp. (stra...  65.1    8e-20
A4YBX5 Large ribosomal subunit protein uL29 [Shewanella putrefaci...  65.1    8e-20
Q8EK61 Large ribosomal subunit protein uL29 [Shewanella oneidensi...  65.1    8e-20
P55840 Large ribosomal subunit protein uL29 [Aggregatibacter acti...  63.2    5e-19
P0A7M6 Large ribosomal subunit protein uL29 [Escherichia coli (st...  60.5    5e-18
P46174 Large ribosomal subunit protein uL29 [Buchnera aphidicola ...  59.7    1e-17
P38514 Large ribosomal subunit protein uL29 [Thermotoga maritima ...  48.5    3e-13
O31163 Large ribosomal subunit protein uL29 [Spiroplasma citri]       50.4    8e-13
O06050 Large ribosomal subunit protein uL29 [Mycobacterium bovis ...  43.9    3e-11
P9WHA7 Large ribosomal subunit protein uL29 [Mycobacterium tuberc...  43.9    3e-11
Q8JHJ1 Large ribosomal subunit protein uL29 [Danio rerio]             43.9    6e-11
Q98TF7 Large ribosomal subunit protein uL29 [Gallus gallus]           43.9    6e-11
P17078 Large ribosomal subunit protein uL29 [Rattus norvegicus]       43.9    6e-11
P42766 Large ribosomal subunit protein uL29 [Homo sapiens]            43.9    6e-11
P04457 Large ribosomal subunit protein uL29 [Geobacillus stearoth...  42.0    1e-10
Q29361 Large ribosomal subunit protein uL29 [Sus scrofa]              42.4    2e-10
P12873 Large ribosomal subunit protein uL29 [Bacillus subtilis (s...  40.8    3e-10


>Q6F7S0 Large ribosomal subunit protein uL29 [Acinetobacter baylyi 
(strain ATCC 33305 / BD413 / ADP1)]
Length=65

 Score = 125 bits (315),  Expect = 7e-44
 Identities = 65/65 (100%), Positives = 65/65 (100%), Gaps = 0/65 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK
Sbjct  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60

Query  61  QGNGQ  65
           QGNGQ
Sbjct  61  QGNGQ  65


>B0V6X6 Large ribosomal subunit protein uL29 [Acinetobacter baumannii 
(strain AYE)]
Length=65

 Score = 122 bits (307),  Expect = 1e-42
 Identities = 63/65 (97%), Positives = 64/65 (98%), Gaps = 0/65 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MKT DLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQ+ARKTIARIKTLLTEK
Sbjct  1   MKTKDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQVARKTIARIKTLLTEK  60

Query  61  QGNGQ  65
           QGNGQ
Sbjct  61  QGNGQ  65


>A3M976 Large ribosomal subunit protein uL29 [Acinetobacter baumannii 
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 
/ 5377)]
Length=65

 Score = 122 bits (307),  Expect = 1e-42
 Identities = 63/65 (97%), Positives = 64/65 (98%), Gaps = 0/65 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MKT DLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQ+ARKTIARIKTLLTEK
Sbjct  1   MKTKDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQVARKTIARIKTLLTEK  60

Query  61  QGNGQ  65
           QGNGQ
Sbjct  61  QGNGQ  65


>B0VQS6 Large ribosomal subunit protein uL29 [Acinetobacter baumannii 
(strain SDF)]
Length=65

 Score = 122 bits (307),  Expect = 1e-42
 Identities = 63/65 (97%), Positives = 64/65 (98%), Gaps = 0/65 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MKT DLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQ+ARKTIARIKTLLTEK
Sbjct  1   MKTKDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQVARKTIARIKTLLTEK  60

Query  61  QGNGQ  65
           QGNGQ
Sbjct  61  QGNGQ  65


>B2HZA0 Large ribosomal subunit protein uL29 [Acinetobacter baumannii 
(strain ACICU)]
Length=65

 Score = 122 bits (307),  Expect = 1e-42
 Identities = 63/65 (97%), Positives = 64/65 (98%), Gaps = 0/65 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MKT DLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQ+ARKTIARIKTLLTEK
Sbjct  1   MKTKDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQVARKTIARIKTLLTEK  60

Query  61  QGNGQ  65
           QGNGQ
Sbjct  61  QGNGQ  65


>B7IA31 Large ribosomal subunit protein uL29 [Acinetobacter baumannii 
(strain AB0057)]
Length=65

 Score = 122 bits (307),  Expect = 1e-42
 Identities = 63/65 (97%), Positives = 64/65 (98%), Gaps = 0/65 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MKT DLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQ+ARKTIARIKTLLTEK
Sbjct  1   MKTKDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQVARKTIARIKTLLTEK  60

Query  61  QGNGQ  65
           QGNGQ
Sbjct  61  QGNGQ  65


>A5WCJ8 Large ribosomal subunit protein uL29 [Psychrobacter sp. 
(strain PRwf-1)]
Length=64

 Score = 84.0 bits (206),  Expect = 3e-27
 Identities = 42/61 (69%), Positives = 51/61 (84%), Gaps = 0/61 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +LR+KSVEEL  LLDE+QL+ FRLRMAKATGQLG +HEV+  R+ IA+IKTL+ EK
Sbjct  1   MKISELRDKSVEELTGLLDEKQLDAFRLRMAKATGQLGSTHEVRANRRAIAQIKTLINEK  60

Query  61  Q  61
           Q
Sbjct  61  Q  61


>Q1QDH8 Large ribosomal subunit protein uL29 [Psychrobacter cryohalolentis 
(strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 
/ K5)]
Length=65

 Score = 80.9 bits (198),  Expect = 5e-26
 Identities = 38/61 (62%), Positives = 52/61 (85%), Gaps = 0/61 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +LR+KS+EEL  LLDE+QL+ FR+RMAKATGQLG +HEV++ R+ IA+++TL+ EK
Sbjct  1   MKISELRDKSLEELTQLLDEKQLDAFRIRMAKATGQLGNTHEVRVNRRAIAQLQTLINEK  60

Query  61  Q  61
           Q
Sbjct  61  Q  61


>Q4FUE8 Large ribosomal subunit protein uL29 [Psychrobacter arcticus 
(strain DSM 17307 / VKM B-2377 / 273-4)]
Length=65

 Score = 80.9 bits (198),  Expect = 5e-26
 Identities = 38/61 (62%), Positives = 52/61 (85%), Gaps = 0/61 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +LR+KS+EEL  LLDE+QL+ FR+RMAKATGQLG +HEV++ R+ IA+++TL+ EK
Sbjct  1   MKISELRDKSLEELTQLLDEKQLDAFRIRMAKATGQLGNTHEVRVNRRAIAQLQTLINEK  60

Query  61  Q  61
           Q
Sbjct  61  Q  61


>Q0VSJ5 Large ribosomal subunit protein uL29 [Alcanivorax borkumensis 
(strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2)]
Length=63

 Score = 68.6 bits (166),  Expect = 3e-21
 Identities = 34/63 (54%), Positives = 45/63 (71%), Gaps = 0/63 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +L+EKSVEEL+    E    QF+LRM  A+GQ+ K+HE+   R+ IAR+KT+L EK
Sbjct  1   MKASELKEKSVEELQQTQIELLEEQFKLRMKSASGQISKTHELGTVRRNIARVKTILREK  60

Query  61  QGN  63
           QGN
Sbjct  61  QGN  63


>Q87T05 Large ribosomal subunit protein uL29 [Vibrio parahaemolyticus 
serotype O3:K6 (strain RIMD 2210633)]
Length=63

 Score = 67.0 bits (162),  Expect = 1e-20
 Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  DLREKSVEEL A L      QF LRM  ATGQL ++H ++  R+ IAR+KT+LTEK
Sbjct  1   MKAQDLREKSVEELNAELMNLLREQFNLRMQAATGQLQQTHTLKAVRRDIARVKTVLTEK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>A7N0I5 Large ribosomal subunit protein uL29 [Vibrio campbellii 
(strain ATCC BAA-1116)]
Length=63

 Score = 66.6 bits (161),  Expect = 2e-20
 Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  DLREKSVEEL A L      QF LRM  ATGQL ++H ++  R+ IAR+KT+LTEK
Sbjct  1   MKAQDLREKSVEELNAELLNLLREQFNLRMQAATGQLQQTHTLKAVRRDIARVKTVLTEK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>Q6LVA8 Large ribosomal subunit protein uL29 [Photobacterium profundum 
(strain SS9)]
Length=63

 Score = 65.5 bits (158),  Expect = 6e-20
 Identities = 34/62 (55%), Positives = 42/62 (68%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           M  +DLR KSVEEL A L      QF LRM  ATGQL ++H ++  R+ IAR+KT+LTEK
Sbjct  1   MNAVDLRAKSVEELNAELVSLLREQFNLRMQAATGQLQQTHNLKAVRRDIARVKTVLTEK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>Q7MPI0 Large ribosomal subunit protein uL29 [Vibrio vulnificus 
(strain YJ016)]
Length=63

 Score = 65.5 bits (158),  Expect = 6e-20
 Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  DLREKSVEEL + L      QF LRM  ATGQL ++H ++  R+ IAR+KT+LTEK
Sbjct  1   MKAQDLREKSVEELNSELLNLLREQFNLRMQAATGQLQQTHTLKAVRRDIARVKTVLTEK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>Q8DE47 Large ribosomal subunit protein uL29 [Vibrio vulnificus 
(strain CMCP6)]
Length=63

 Score = 65.5 bits (158),  Expect = 6e-20
 Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  DLREKSVEEL + L      QF LRM  ATGQL ++H ++  R+ IAR+KT+LTEK
Sbjct  1   MKAQDLREKSVEELNSELLNLLREQFNLRMQAATGQLQQTHTLKAVRRDIARVKTVLTEK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>C3LRQ0 Large ribosomal subunit protein uL29 [Vibrio cholerae 
serotype O1 (strain M66-2)]
Length=63

 Score = 65.5 bits (158),  Expect = 6e-20
 Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  DLREKSVEEL + L      QF LRM  ATGQL ++H ++  R+ IAR+KT+LTEK
Sbjct  1   MKAQDLREKSVEELNSELLNLLKEQFNLRMQAATGQLQQTHTLKAVRRDIARVKTVLTEK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>Q9KNZ2 Large ribosomal subunit protein uL29 [Vibrio cholerae 
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=63

 Score = 65.5 bits (158),  Expect = 6e-20
 Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  DLREKSVEEL + L      QF LRM  ATGQL ++H ++  R+ IAR+KT+LTEK
Sbjct  1   MKAQDLREKSVEELNSELLNLLKEQFNLRMQAATGQLQQTHTLKAVRRDIARVKTVLTEK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>A5F558 Large ribosomal subunit protein uL29 [Vibrio cholerae 
serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)]
Length=63

 Score = 65.5 bits (158),  Expect = 6e-20
 Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  DLREKSVEEL + L      QF LRM  ATGQL ++H ++  R+ IAR+KT+LTEK
Sbjct  1   MKAQDLREKSVEELNSELLNLLKEQFNLRMQAATGQLQQTHTLKAVRRDIARVKTVLTEK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>Q0I097 Large ribosomal subunit protein uL29 [Shewanella sp. (strain 
MR-7)]
Length=63

 Score = 65.1 bits (157),  Expect = 8e-20
 Identities = 33/62 (53%), Positives = 44/62 (71%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +LREKSVEEL A L      QF LRM  ATGQL ++H++++ R+ IAR+KT++T K
Sbjct  1   MKASELREKSVEELNAELLGLLREQFNLRMQHATGQLTQTHQLKLVRRNIARVKTIITSK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>Q0HNS9 Large ribosomal subunit protein uL29 [Shewanella sp. (strain 
MR-4)]
Length=63

 Score = 65.1 bits (157),  Expect = 8e-20
 Identities = 33/62 (53%), Positives = 44/62 (71%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +LREKSVEEL A L      QF LRM  ATGQL ++H++++ R+ IAR+KT++T K
Sbjct  1   MKASELREKSVEELNAELLGLLREQFNLRMQHATGQLTQTHQLKLVRRNIARVKTIITSK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>A0KRN2 Large ribosomal subunit protein uL29 [Shewanella sp. (strain 
ANA-3)]
Length=63

 Score = 65.1 bits (157),  Expect = 8e-20
 Identities = 33/62 (53%), Positives = 44/62 (71%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +LREKSVEEL A L      QF LRM  ATGQL ++H++++ R+ IAR+KT++T K
Sbjct  1   MKASELREKSVEELNAELLGLLREQFNLRMQHATGQLTQTHQLKLVRRNIARVKTIITSK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>A4YBX5 Large ribosomal subunit protein uL29 [Shewanella putrefaciens 
(strain CN-32 / ATCC BAA-453)]
Length=63

 Score = 65.1 bits (157),  Expect = 8e-20
 Identities = 33/62 (53%), Positives = 44/62 (71%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +LREKSVEEL A L      QF LRM  ATGQL ++H++++ R+ IAR+KT++T K
Sbjct  1   MKASELREKSVEELNAELLGLLREQFNLRMQHATGQLTQTHQLKLVRRNIARVKTIITSK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>Q8EK61 Large ribosomal subunit protein uL29 [Shewanella oneidensis 
(strain MR-1)]
Length=63

 Score = 65.1 bits (157),  Expect = 8e-20
 Identities = 33/62 (53%), Positives = 44/62 (71%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +LREKSVEEL A L      QF LRM  ATGQL ++H++++ R+ IAR+KT++T K
Sbjct  1   MKASELREKSVEELNAELLGLLREQFNLRMQHATGQLTQTHQLKLVRRNIARVKTIITSK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>P55840 Large ribosomal subunit protein uL29 [Aggregatibacter 
actinomycetemcomitans]
Length=63

 Score = 63.2 bits (152),  Expect = 5e-19
 Identities = 34/62 (55%), Positives = 45/62 (73%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +LR KSVEEL A L      QF+LRM  ATGQL ++H+++  R++IA+IKT+LTEK
Sbjct  1   MKAQELRTKSVEELNAELVNLLGEQFKLRMQAATGQLQQTHQLKQVRRSIAQIKTVLTEK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>P0A7M6 Large ribosomal subunit protein uL29 [Escherichia coli 
(strain K12)]
Length=63

 Score = 60.5 bits (145),  Expect = 5e-18
 Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +LREKSVEEL   L      QF LRM  A+GQL +SH ++  R+ +AR+KTLL EK
Sbjct  1   MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>P46174 Large ribosomal subunit protein uL29 [Buchnera aphidicola 
subsp. Acyrthosiphon kondoi]
Length=63

 Score = 59.7 bits (143),  Expect = 1e-17
 Identities = 32/62 (52%), Positives = 41/62 (66%), Gaps = 0/62 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +LREK VEEL   L      QF LRM  A+GQL ++H ++  R+ +AR+KTLLTEK
Sbjct  1   MKAQELREKGVEELNTELLNLLREQFNLRMQGASGQLQQTHLLKQVRRNVARVKTLLTEK  60

Query  61  QG  62
            G
Sbjct  61  AG  62


>P38514 Large ribosomal subunit protein uL29 [Thermotoga maritima 
(strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 
/ MSB8)]
Length=66

 Score = 48.5 bits (114),  Expect = 3e-13
 Identities = 25/61 (41%), Positives = 39/61 (64%), Gaps = 0/61 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  +LR  + EELK LL+E++     LR   A GQL  +  +++ ++ IARIKT+L E+
Sbjct  1   MKASELRNYTDEELKNLLEEKKRQLMELRFQLAMGQLKNTSLIKLTKRDIARIKTILRER  60

Query  61  Q  61
           +
Sbjct  61  E  61


>O31163 Large ribosomal subunit protein uL29 [Spiroplasma citri]
Length=339

 Score = 50.4 bits (119),  Expect = 8e-13
 Identities = 26/61 (43%), Positives = 37/61 (61%), Gaps = 0/61 (0%)

Query  5   DLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEKQGNG  64
           DL +KSVEELK L +E +   F LR   A G L K H +   +  IARI T+L+ ++ +G
Sbjct  3   DLTKKSVEELKKLEEESRAELFALRFQSAMGNLEKPHRIGELKNQIARILTILSARKNSG  62

Query  65  Q  65
           +
Sbjct  63  E  63


 Score = 15.4 bits (28),  Expect = 2.6
 Identities = 13/47 (28%), Positives = 20/47 (43%), Gaps = 9/47 (19%)

Query  14   LKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
            LKAL+ E+         A A     KS     + KT   +K++ + K
Sbjct  201  LKALIKEK---------AAAKKPAAKSKTSTPSGKTTVTVKSVTSAK  238


 Score = 14.2 bits (25),  Expect = 6.6
 Identities = 7/26 (27%), Positives = 12/26 (46%), Gaps = 0/26 (0%)

Query  31   AKATGQLGKSHEVQIARKTIARIKTL  56
            AKA  ++ K     +  KT+ +   L
Sbjct  237  AKADIEVPKETSKPVPTKTVKKAAEL  262


>O06050 Large ribosomal subunit protein uL29 [Mycobacterium bovis 
(strain ATCC BAA-935 / AF2122/97)]
Length=77

 Score = 43.9 bits (102),  Expect = 3e-11
 Identities = 24/57 (42%), Positives = 34/57 (60%), Gaps = 0/57 (0%)

Query  5   DLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEKQ  61
           +LRE + EEL   L E +   F LR   ATGQL  +  ++  R+ IARI T+L E++
Sbjct  9   ELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVLRERE  65


>P9WHA7 Large ribosomal subunit protein uL29 [Mycobacterium tuberculosis 
(strain ATCC 25618 / H37Rv)]
Length=77

 Score = 43.9 bits (102),  Expect = 3e-11
 Identities = 24/57 (42%), Positives = 34/57 (60%), Gaps = 0/57 (0%)

Query  5   DLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEKQ  61
           +LRE + EEL   L E +   F LR   ATGQL  +  ++  R+ IARI T+L E++
Sbjct  9   ELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVLRERE  65


>Q8JHJ1 Large ribosomal subunit protein uL29 [Danio rerio]
Length=123

 Score = 43.9 bits (102),  Expect = 6e-11
 Identities = 24/62 (39%), Positives = 39/62 (63%), Gaps = 1/62 (2%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKAT-GQLGKSHEVQIARKTIARIKTLLTE  59
           +K  DLR K  EEL   LD+ ++   +LR+AK T G   K  ++++ RK+IAR+ T++ +
Sbjct  4   IKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ  63

Query  60  KQ  61
            Q
Sbjct  64  TQ  65


>Q98TF7 Large ribosomal subunit protein uL29 [Gallus gallus]
Length=123

 Score = 43.9 bits (102),  Expect = 6e-11
 Identities = 24/62 (39%), Positives = 39/62 (63%), Gaps = 1/62 (2%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKAT-GQLGKSHEVQIARKTIARIKTLLTE  59
           +K  DLR K  EEL   LD+ ++   +LR+AK T G   K  ++++ RK+IAR+ T++ +
Sbjct  4   IKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ  63

Query  60  KQ  61
            Q
Sbjct  64  TQ  65


>P17078 Large ribosomal subunit protein uL29 [Rattus norvegicus]
Length=123

 Score = 43.9 bits (102),  Expect = 6e-11
 Identities = 24/62 (39%), Positives = 39/62 (63%), Gaps = 1/62 (2%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKAT-GQLGKSHEVQIARKTIARIKTLLTE  59
           +K  DLR K  EEL   LD+ ++   +LR+AK T G   K  ++++ RK+IAR+ T++ +
Sbjct  4   IKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ  63

Query  60  KQ  61
            Q
Sbjct  64  TQ  65


>P42766 Large ribosomal subunit protein uL29 [Homo sapiens]
Length=123

 Score = 43.9 bits (102),  Expect = 6e-11
 Identities = 24/62 (39%), Positives = 39/62 (63%), Gaps = 1/62 (2%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKAT-GQLGKSHEVQIARKTIARIKTLLTE  59
           +K  DLR K  EEL   LD+ ++   +LR+AK T G   K  ++++ RK+IAR+ T++ +
Sbjct  4   IKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ  63

Query  60  KQ  61
            Q
Sbjct  64  TQ  65


>P04457 Large ribosomal subunit protein uL29 [Geobacillus stearothermophilus]
Length=66

 Score = 42.0 bits (97),  Expect = 1e-10
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 0/61 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  ++RE +  E++  +   +   F LR   ATGQL  +  ++  RK IAR+KT++ E+
Sbjct  1   MKAKEIRELTTAEIEQKIKALKEELFNLRFQLATGQLENTARIRQVRKDIARMKTIIRER  60

Query  61  Q  61
           +
Sbjct  61  E  61


>Q29361 Large ribosomal subunit protein uL29 [Sus scrofa]
Length=123

 Score = 42.4 bits (98),  Expect = 2e-10
 Identities = 23/62 (37%), Positives = 39/62 (63%), Gaps = 1/62 (2%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKAT-GQLGKSHEVQIARKTIARIKTLLTE  59
           +K  DLR K  EEL   L++ ++   +LR+AK T G   K  ++++ RK+IAR+ T++ +
Sbjct  4   IKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ  63

Query  60  KQ  61
            Q
Sbjct  64  TQ  65


>P12873 Large ribosomal subunit protein uL29 [Bacillus subtilis 
(strain 168)]
Length=66

 Score = 40.8 bits (94),  Expect = 3e-10
 Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%)

Query  1   MKTIDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQIARKTIARIKTLLTEK  60
           MK  ++R+ +  E++  +   +   F LR   ATGQL  +  ++  RK IAR+KT++ E+
Sbjct  1   MKANEIRDLTTAEIEQKVKSLKEELFNLRFQLATGQLENTARIREVRKAIARMKTVIRER  60

Query  61  Q  61
           +
Sbjct  61  E  61



Lambda      K        H        a         alpha
   0.324    0.136    0.355    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 76518


  Database: 764f8df47958570ca462826a4c24efff.SwissProt.fasta
    Posted date:  May 9, 2024  9:56 PM
  Number of letters in database: 2,961
  Number of sequences in database:  37



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40