BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: b0d6aec704dd5c5b6d39607c343e4845.SwissProt.fasta
           36 sequences; 3,230 total letters



Query= ACIAD3210

Length=86
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6F7S1 Small ribosomal subunit protein uS17 [Acinetobacter baylyi...  166     4e-59
A3M975 Small ribosomal subunit protein uS17 [Acinetobacter bauman...  162     9e-58
B0VQS7 Small ribosomal subunit protein uS17 [Acinetobacter bauman...  162     9e-58
B2HZ99 Small ribosomal subunit protein uS17 [Acinetobacter bauman...  162     9e-58
B7IA30 Small ribosomal subunit protein uS17 [Acinetobacter bauman...  162     9e-58
B7GW11 Small ribosomal subunit protein uS17 [Acinetobacter bauman...  162     9e-58
Q9HWE4 Small ribosomal subunit protein uS17 [Pseudomonas aerugino...  133     3e-46
Q02T71 Small ribosomal subunit protein uS17 [Pseudomonas aerugino...  133     3e-46
B7V653 Small ribosomal subunit protein uS17 [Pseudomonas aerugino...  133     3e-46
A6UZJ7 Small ribosomal subunit protein uS17 [Pseudomonas aerugino...  133     3e-46
Q1IFV7 Small ribosomal subunit protein uS17 [Pseudomonas entomoph...  129     1e-44
B1JDX5 Small ribosomal subunit protein uS17 [Pseudomonas putida (...  129     1e-44
B0KK76 Small ribosomal subunit protein uS17 [Pseudomonas putida (...  129     1e-44
C1DKM2 Small ribosomal subunit protein uS17 [Azotobacter vineland...  129     1e-44
A4XZ81 Small ribosomal subunit protein uS17 [Pseudomonas mendocin...  129     1e-44
Q88QM6 Small ribosomal subunit protein uS17 [Pseudomonas putida (...  128     3e-44
A5VXQ6 Small ribosomal subunit protein uS17 [Pseudomonas putida (...  128     3e-44
A4VHN9 Small ribosomal subunit protein uS17 [Stutzerimonas stutze...  128     3e-44
Q48D45 Small ribosomal subunit protein uS17 [Pseudomonas savastan...  127     8e-44
Q4ZMQ3 Small ribosomal subunit protein uS17 [Pseudomonas syringae...  127     8e-44
Q889W2 Small ribosomal subunit protein uS17 [Pseudomonas syringae...  127     8e-44
C3K2W7 Small ribosomal subunit protein uS17 [Pseudomonas fluoresc...  127     8e-44
Q4K542 Small ribosomal subunit protein uS17 [Pseudomonas fluoresc...  127     1e-43
Q3K5Z7 Small ribosomal subunit protein uS17 [Pseudomonas fluoresc...  127     1e-43
P55829 Small ribosomal subunit protein uS17 [Aggregatibacter acti...  120     3e-41
P0AG63 Small ribosomal subunit protein uS17 [Escherichia coli (st...  114     8e-39
P46175 Small ribosomal subunit protein uS17 [Buchnera aphidicola ...  111     2e-37
P38519 Small ribosomal subunit protein uS17 [Thermotoga maritima ...  99.0    3e-32
P0A4B4 Small ribosomal subunit protein uS17 [Streptococcus pneumo...  95.9    2e-31
P0A4B3 Small ribosomal subunit protein uS17 [Streptococcus pneumo...  95.9    2e-31
P23828 Small ribosomal subunit protein uS17 [Geobacillus stearoth...  94.4    1e-30
P12874 Small ribosomal subunit protein uS17 [Bacillus subtilis (s...  92.8    4e-30
O06051 Small ribosomal subunit protein uS17 [Mycobacterium bovis ...  91.7    4e-29
P24321 Small ribosomal subunit protein uS17 [Thermus thermophilus]    85.5    5e-27
P0DOY7 Small ribosomal subunit protein uS17 [Thermus thermophilus...  85.5    5e-27
O31164 Small ribosomal subunit protein uS17 [Spiroplasma citri]       82.8    3e-26


>Q6F7S1 Small ribosomal subunit protein uS17 [Acinetobacter baylyi 
(strain ATCC 33305 / BD413 / ADP1)]
Length=85

 Score = 166 bits (419),  Expect = 4e-59
 Identities = 85/85 (100%), Positives = 85/85 (100%), Gaps = 0/85 (0%)

Query  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV  60
           MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV
Sbjct  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV  60

Query  61  TIKESRPISKTKAWTLVEVVEVAAE  85
           TIKESRPISKTKAWTLVEVVEVAAE
Sbjct  61  TIKESRPISKTKAWTLVEVVEVAAE  85


>A3M975 Small ribosomal subunit protein uS17 [Acinetobacter baumannii 
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 
/ 5377)]
Length=85

 Score = 162 bits (410),  Expect = 9e-58
 Identities = 82/85 (96%), Positives = 84/85 (99%), Gaps = 0/85 (0%)

Query  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV  60
           MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAK+GD+V
Sbjct  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKIGDVV  60

Query  61  TIKESRPISKTKAWTLVEVVEVAAE  85
           TIKESRPISKTKAWTLVEVVE AAE
Sbjct  61  TIKESRPISKTKAWTLVEVVEAAAE  85


>B0VQS7 Small ribosomal subunit protein uS17 [Acinetobacter baumannii 
(strain SDF)]
Length=85

 Score = 162 bits (410),  Expect = 9e-58
 Identities = 82/85 (96%), Positives = 84/85 (99%), Gaps = 0/85 (0%)

Query  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV  60
           MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAK+GD+V
Sbjct  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKIGDVV  60

Query  61  TIKESRPISKTKAWTLVEVVEVAAE  85
           TIKESRPISKTKAWTLVEVVE AAE
Sbjct  61  TIKESRPISKTKAWTLVEVVEAAAE  85


>B2HZ99 Small ribosomal subunit protein uS17 [Acinetobacter baumannii 
(strain ACICU)]
Length=85

 Score = 162 bits (410),  Expect = 9e-58
 Identities = 82/85 (96%), Positives = 84/85 (99%), Gaps = 0/85 (0%)

Query  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV  60
           MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAK+GD+V
Sbjct  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKIGDVV  60

Query  61  TIKESRPISKTKAWTLVEVVEVAAE  85
           TIKESRPISKTKAWTLVEVVE AAE
Sbjct  61  TIKESRPISKTKAWTLVEVVEAAAE  85


>B7IA30 Small ribosomal subunit protein uS17 [Acinetobacter baumannii 
(strain AB0057)]
Length=85

 Score = 162 bits (410),  Expect = 9e-58
 Identities = 82/85 (96%), Positives = 84/85 (99%), Gaps = 0/85 (0%)

Query  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV  60
           MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAK+GD+V
Sbjct  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKIGDVV  60

Query  61  TIKESRPISKTKAWTLVEVVEVAAE  85
           TIKESRPISKTKAWTLVEVVE AAE
Sbjct  61  TIKESRPISKTKAWTLVEVVEAAAE  85


>B7GW11 Small ribosomal subunit protein uS17 [Acinetobacter baumannii 
(strain AB307-0294)]
Length=85

 Score = 162 bits (410),  Expect = 9e-58
 Identities = 82/85 (96%), Positives = 84/85 (99%), Gaps = 0/85 (0%)

Query  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV  60
           MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAK+GD+V
Sbjct  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKIGDVV  60

Query  61  TIKESRPISKTKAWTLVEVVEVAAE  85
           TIKESRPISKTKAWTLVEVVE AAE
Sbjct  61  TIKESRPISKTKAWTLVEVVEAAAE  85


>Q9HWE4 Small ribosomal subunit protein uS17 [Pseudomonas aeruginosa 
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=88

 Score = 133 bits (335),  Expect = 3e-46
 Identities = 60/84 (71%), Positives = 78/84 (93%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           ++KTVRTLTG+VVSDKMDK++ VLIERRV+HP+YGK ++RSTKLHAHDE+N  ++GDLVT
Sbjct  4   AQKTVRTLTGRVVSDKMDKTVTVLIERRVKHPIYGKYVKRSTKLHAHDESNQCRIGDLVT  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTKAWTLV++VE A E
Sbjct  64  IRETRPLAKTKAWTLVDIVERAVE  87


>Q02T71 Small ribosomal subunit protein uS17 [Pseudomonas aeruginosa 
(strain UCBPP-PA14)]
Length=88

 Score = 133 bits (335),  Expect = 3e-46
 Identities = 60/84 (71%), Positives = 78/84 (93%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           ++KTVRTLTG+VVSDKMDK++ VLIERRV+HP+YGK ++RSTKLHAHDE+N  ++GDLVT
Sbjct  4   AQKTVRTLTGRVVSDKMDKTVTVLIERRVKHPIYGKYVKRSTKLHAHDESNQCRIGDLVT  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTKAWTLV++VE A E
Sbjct  64  IRETRPLAKTKAWTLVDIVERAVE  87


>B7V653 Small ribosomal subunit protein uS17 [Pseudomonas aeruginosa 
(strain LESB58)]
Length=88

 Score = 133 bits (335),  Expect = 3e-46
 Identities = 60/84 (71%), Positives = 78/84 (93%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           ++KTVRTLTG+VVSDKMDK++ VLIERRV+HP+YGK ++RSTKLHAHDE+N  ++GDLVT
Sbjct  4   AQKTVRTLTGRVVSDKMDKTVTVLIERRVKHPIYGKYVKRSTKLHAHDESNQCRIGDLVT  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTKAWTLV++VE A E
Sbjct  64  IRETRPLAKTKAWTLVDIVERAVE  87


>A6UZJ7 Small ribosomal subunit protein uS17 [Pseudomonas aeruginosa 
(strain PA7)]
Length=88

 Score = 133 bits (335),  Expect = 3e-46
 Identities = 60/84 (71%), Positives = 78/84 (93%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           ++KTVRTLTG+VVSDKMDK++ VLIERRV+HP+YGK ++RSTKLHAHDE+N  ++GDLVT
Sbjct  4   AQKTVRTLTGRVVSDKMDKTVTVLIERRVKHPIYGKYVKRSTKLHAHDESNQCRIGDLVT  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTKAWTLV++VE A E
Sbjct  64  IRETRPLAKTKAWTLVDIVERAVE  87


>Q1IFV7 Small ribosomal subunit protein uS17 [Pseudomonas entomophila 
(strain L48)]
Length=88

 Score = 129 bits (325),  Expect = 1e-44
 Identities = 60/84 (71%), Positives = 76/84 (90%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           +EKTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE+N  K+GD V+
Sbjct  4   AEKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDESNQCKIGDKVS  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTK+W LVEV+E A E
Sbjct  64  IRETRPLAKTKSWALVEVLERAVE  87


>B1JDX5 Small ribosomal subunit protein uS17 [Pseudomonas putida 
(strain W619)]
Length=88

 Score = 129 bits (325),  Expect = 1e-44
 Identities = 60/84 (71%), Positives = 76/84 (90%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           +EKTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE+N  K+GD V+
Sbjct  4   AEKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDESNQCKIGDKVS  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTK+W LVEV+E A E
Sbjct  64  IRETRPLAKTKSWALVEVLERAVE  87


>B0KK76 Small ribosomal subunit protein uS17 [Pseudomonas putida 
(strain GB-1)]
Length=88

 Score = 129 bits (325),  Expect = 1e-44
 Identities = 60/84 (71%), Positives = 76/84 (90%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           +EKTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE+N  K+GD V+
Sbjct  4   AEKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDESNQCKIGDKVS  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTK+W LVEV+E A E
Sbjct  64  IRETRPLAKTKSWALVEVLERAVE  87


>C1DKM2 Small ribosomal subunit protein uS17 [Azotobacter vinelandii 
(strain DJ / ATCC BAA-1303)]
Length=88

 Score = 129 bits (325),  Expect = 1e-44
 Identities = 60/84 (71%), Positives = 75/84 (89%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           ++KTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE N  ++GD VT
Sbjct  4   AQKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDETNQCRIGDTVT  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTK+W LVEVVE A E
Sbjct  64  IRETRPLAKTKSWMLVEVVERAVE  87


>A4XZ81 Small ribosomal subunit protein uS17 [Pseudomonas mendocina 
(strain ymp)]
Length=88

 Score = 129 bits (325),  Expect = 1e-44
 Identities = 62/83 (75%), Positives = 74/83 (89%), Gaps = 0/83 (0%)

Query  3   EKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVTI  62
           EKTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE+N  K+GD V+I
Sbjct  5   EKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDESNQCKIGDKVSI  64

Query  63  KESRPISKTKAWTLVEVVEVAAE  85
           +E+RP SKTK+W LVEVVE A E
Sbjct  65  RETRPQSKTKSWALVEVVERAVE  87


>Q88QM6 Small ribosomal subunit protein uS17 [Pseudomonas putida 
(strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / 
KT2440)]
Length=88

 Score = 128 bits (322),  Expect = 3e-44
 Identities = 60/84 (71%), Positives = 75/84 (89%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           +EKTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE N  K+GD V+
Sbjct  4   AEKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDEANQCKIGDKVS  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTK+W LVEV+E A E
Sbjct  64  IRETRPLAKTKSWALVEVLERAVE  87


>A5VXQ6 Small ribosomal subunit protein uS17 [Pseudomonas putida 
(strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1)]
Length=88

 Score = 128 bits (322),  Expect = 3e-44
 Identities = 60/84 (71%), Positives = 75/84 (89%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           +EKTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE N  K+GD V+
Sbjct  4   AEKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDEANQCKIGDKVS  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTK+W LVEV+E A E
Sbjct  64  IRETRPLAKTKSWALVEVLERAVE  87


>A4VHN9 Small ribosomal subunit protein uS17 [Stutzerimonas stutzeri 
(strain A1501)]
Length=88

 Score = 128 bits (322),  Expect = 3e-44
 Identities = 61/84 (73%), Positives = 74/84 (88%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           ++KTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE N  K+GD V+
Sbjct  4   AQKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDETNQCKIGDKVS  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP SKTK+W LVEVVE A E
Sbjct  64  IRETRPQSKTKSWALVEVVERAVE  87


>Q48D45 Small ribosomal subunit protein uS17 [Pseudomonas savastanoi 
pv. phaseolicola (strain 1448A / Race 6)]
Length=88

 Score = 127 bits (319),  Expect = 8e-44
 Identities = 58/84 (69%), Positives = 74/84 (88%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           +EKTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE N   +GD VT
Sbjct  4   AEKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDETNQCHIGDKVT  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTK+W LV+++E A E
Sbjct  64  IRETRPVAKTKSWALVDILERAVE  87


>Q4ZMQ3 Small ribosomal subunit protein uS17 [Pseudomonas syringae 
pv. syringae (strain B728a)]
Length=88

 Score = 127 bits (319),  Expect = 8e-44
 Identities = 58/84 (69%), Positives = 74/84 (88%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           +EKTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE N   +GD VT
Sbjct  4   AEKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDETNQCHIGDKVT  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTK+W LV+++E A E
Sbjct  64  IRETRPVAKTKSWALVDILERAVE  87


>Q889W2 Small ribosomal subunit protein uS17 [Pseudomonas syringae 
pv. tomato (strain ATCC BAA-871 / DC3000)]
Length=88

 Score = 127 bits (319),  Expect = 8e-44
 Identities = 58/84 (69%), Positives = 74/84 (88%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           +EKTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE N   +GD VT
Sbjct  4   AEKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDETNQCHIGDKVT  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTK+W LV+++E A E
Sbjct  64  IRETRPVAKTKSWALVDILERAVE  87


>C3K2W7 Small ribosomal subunit protein uS17 [Pseudomonas fluorescens 
(strain SBW25)]
Length=88

 Score = 127 bits (319),  Expect = 8e-44
 Identities = 59/84 (70%), Positives = 74/84 (88%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           +EKTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE N   +GD VT
Sbjct  4   AEKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDETNQCHIGDKVT  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTK+W LV+V+E A E
Sbjct  64  IRETRPLAKTKSWALVDVLERAVE  87


>Q4K542 Small ribosomal subunit protein uS17 [Pseudomonas fluorescens 
(strain ATCC BAA-477 / NRRL B-23932 / Pf-5)]
Length=88

 Score = 127 bits (318),  Expect = 1e-43
 Identities = 59/84 (70%), Positives = 74/84 (88%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           +EKTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE N   +GD VT
Sbjct  4   AEKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDETNQCHIGDKVT  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTK+W LV+V+E A E
Sbjct  64  IRETRPMAKTKSWALVDVLERAVE  87


>Q3K5Z7 Small ribosomal subunit protein uS17 [Pseudomonas fluorescens 
(strain Pf0-1)]
Length=88

 Score = 127 bits (318),  Expect = 1e-43
 Identities = 59/84 (70%), Positives = 74/84 (88%), Gaps = 0/84 (0%)

Query  2   SEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVT  61
           +EKTVRTLTG+VVSDKMDK+I VLIERRV+HP+YGK ++RSTKLHAHDE N   +GD VT
Sbjct  4   AEKTVRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDETNQCHIGDKVT  63

Query  62  IKESRPISKTKAWTLVEVVEVAAE  85
           I+E+RP++KTK+W LV+V+E A E
Sbjct  64  IRETRPMAKTKSWALVDVLERAVE  87


>P55829 Small ribosomal subunit protein uS17 [Aggregatibacter 
actinomycetemcomitans]
Length=85

 Score = 120 bits (302),  Expect = 3e-41
 Identities = 59/83 (71%), Positives = 72/83 (87%), Gaps = 1/83 (1%)

Query  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV  60
           M++K +R++ G+VVSDKM+KS VV IER+V+HPLYGK IRR+TKLH HDENN AKLGDLV
Sbjct  1   MTDK-IRSVQGRVVSDKMEKSFVVAIERKVKHPLYGKFIRRTTKLHVHDENNEAKLGDLV  59

Query  61  TIKESRPISKTKAWTLVEVVEVA  83
            ++E RPISKTK+WTLV VVE A
Sbjct  60  EVRECRPISKTKSWTLVRVVEKA  82


>P0AG63 Small ribosomal subunit protein uS17 [Escherichia coli 
(strain K12)]
Length=84

 Score = 114 bits (286),  Expect = 8e-39
 Identities = 56/83 (67%), Positives = 70/83 (84%), Gaps = 1/83 (1%)

Query  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV  60
           M++K +RTL G+VVSDKM+KSIVV IER V+HP+YGK I+R+TKLH HDENN   +GD+V
Sbjct  1   MTDK-IRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVV  59

Query  61  TIKESRPISKTKAWTLVEVVEVA  83
            I+E RP+SKTK+WTLV VVE A
Sbjct  60  EIRECRPLSKTKSWTLVRVVEKA  82


>P46175 Small ribosomal subunit protein uS17 [Buchnera aphidicola 
subsp. Acyrthosiphon kondoi]
Length=84

 Score = 111 bits (277),  Expect = 2e-37
 Identities = 52/78 (67%), Positives = 65/78 (83%), Gaps = 0/78 (0%)

Query  6   VRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVTIKES  65
           +RTL G+VVS KM+KSIVV IER V+HP+YGK I+R+TKLH HDENN   +GD+V I+E 
Sbjct  5   IRTLQGRVVSHKMEKSIVVAIERTVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIREC  64

Query  66  RPISKTKAWTLVEVVEVA  83
           RP+SKTK+WTLV VV+ A
Sbjct  65  RPLSKTKSWTLVRVVDKA  82


>P38519 Small ribosomal subunit protein uS17 [Thermotoga maritima 
(strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 
/ MSB8)]
Length=107

 Score = 99.0 bits (245),  Expect = 3e-32
 Identities = 43/75 (57%), Positives = 60/75 (80%), Gaps = 0/75 (0%)

Query  7   RTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVTIKESR  66
           + LTG VVSDKMDK++VV +E+ VQHPLY K ++R+ K HAHDE N  K+GD+V I+E+R
Sbjct  4   KRLTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDERNECKIGDVVEIEETR  63

Query  67  PISKTKAWTLVEVVE  81
           P+SKTK W +V +++
Sbjct  64  PLSKTKRWRVVRIIQ  78


>P0A4B4 Small ribosomal subunit protein uS17 [Streptococcus pneumoniae 
(strain ATCC BAA-255 / R6)]
Length=86

 Score = 95.9 bits (237),  Expect = 2e-31
 Identities = 48/83 (58%), Positives = 59/83 (71%), Gaps = 0/83 (0%)

Query  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV  60
           M     + L G+VVSDKMDK+I V++E +  HP+YGK I  S K  AHDENNVAK GD+V
Sbjct  1   MERNNRKVLVGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKKYKAHDENNVAKEGDIV  60

Query  61  TIKESRPISKTKAWTLVEVVEVA  83
            I E+RP+S TK + LVEVVE A
Sbjct  61  RIMETRPLSATKRFRLVEVVEEA  83


>P0A4B3 Small ribosomal subunit protein uS17 [Streptococcus pneumoniae 
serotype 4 (strain ATCC BAA-334 / TIGR4)]
Length=86

 Score = 95.9 bits (237),  Expect = 2e-31
 Identities = 48/83 (58%), Positives = 59/83 (71%), Gaps = 0/83 (0%)

Query  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV  60
           M     + L G+VVSDKMDK+I V++E +  HP+YGK I  S K  AHDENNVAK GD+V
Sbjct  1   MERNNRKVLVGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKKYKAHDENNVAKEGDIV  60

Query  61  TIKESRPISKTKAWTLVEVVEVA  83
            I E+RP+S TK + LVEVVE A
Sbjct  61  RIMETRPLSATKRFRLVEVVEEA  83


>P23828 Small ribosomal subunit protein uS17 [Geobacillus stearothermophilus]
Length=87

 Score = 94.4 bits (233),  Expect = 1e-30
 Identities = 48/84 (57%), Positives = 63/84 (75%), Gaps = 1/84 (1%)

Query  1   MSEKTVRTL-TGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDL  59
           MSE+  R +  G+VVSDKMDK+I VL+E   +HPLYGK ++ S K  AHDE+N AK+GD+
Sbjct  1   MSERNQRKVYVGRVVSDKMDKTITVLVETYKKHPLYGKRVKYSKKYKAHDEHNEAKVGDI  60

Query  60  VTIKESRPISKTKAWTLVEVVEVA  83
           V I E+RP+S TK + LVE+VE A
Sbjct  61  VKIMETRPLSATKRFRLVEIVEKA  84


>P12874 Small ribosomal subunit protein uS17 [Bacillus subtilis 
(strain 168)]
Length=87

 Score = 92.8 bits (229),  Expect = 4e-30
 Identities = 48/84 (57%), Positives = 62/84 (74%), Gaps = 1/84 (1%)

Query  1   MSEKTVRTL-TGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDL  59
           MSE+  R +  G+VVSDKMDK+I V++E   +H LYGK ++ S K  AHDENN AK+GD+
Sbjct  1   MSERNQRKVYQGRVVSDKMDKTITVVVETYKKHTLYGKRVKYSKKFKAHDENNQAKIGDI  60

Query  60  VTIKESRPISKTKAWTLVEVVEVA  83
           V I E+RP+S TK + LVEVVE A
Sbjct  61  VKIMETRPLSATKRFRLVEVVEEA  84


>O06051 Small ribosomal subunit protein uS17 [Mycobacterium bovis 
(strain ATCC BAA-935 / AF2122/97)]
Length=135

 Score = 91.7 bits (226),  Expect = 4e-29
 Identities = 44/77 (57%), Positives = 60/77 (78%), Gaps = 0/77 (0%)

Query  7    RTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVTIKESR  66
            +T  G VVSDKM K+IVV +E R++HPLYGK IR + K+ AHDE++VA +GD V++ E+R
Sbjct  58   KTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSVAGIGDRVSLMETR  117

Query  67   PISKTKAWTLVEVVEVA  83
            P+S TK W LVE++E A
Sbjct  118  PLSATKRWRLVEILEKA  134


>P24321 Small ribosomal subunit protein uS17 [Thermus thermophilus]
Length=105

 Score = 85.5 bits (210),  Expect = 5e-27
 Identities = 43/75 (57%), Positives = 54/75 (72%), Gaps = 0/75 (0%)

Query  7   RTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVTIKESR  66
           + LTG VVSDKM K++ VL+ER+  HPLYGK I+RS K  AHD     KLGD+V I ESR
Sbjct  4   KVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESR  63

Query  67  PISKTKAWTLVEVVE  81
           PISK K + ++ +VE
Sbjct  64  PISKRKRFRVLRLVE  78


>P0DOY7 Small ribosomal subunit protein uS17 [Thermus thermophilus 
(strain ATCC 27634 / DSM 579 / HB8)]
Length=105

 Score = 85.5 bits (210),  Expect = 5e-27
 Identities = 43/75 (57%), Positives = 54/75 (72%), Gaps = 0/75 (0%)

Query  7   RTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLVTIKESR  66
           + LTG VVSDKM K++ VL+ER+  HPLYGK I+RS K  AHD     KLGD+V I ESR
Sbjct  4   KVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESR  63

Query  67  PISKTKAWTLVEVVE  81
           PISK K + ++ +VE
Sbjct  64  PISKRKRFRVLRLVE  78


>O31164 Small ribosomal subunit protein uS17 [Spiroplasma citri]
Length=85

 Score = 82.8 bits (203),  Expect = 3e-26
 Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 0/83 (0%)

Query  1   MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKLGDLV  60
           M   + + L G+V+SD + K+I VL+E    HPLY K ++ S K  AHDE N A +GD V
Sbjct  1   MERNSRKVLQGRVISDNLKKTITVLVETYKNHPLYKKRVKYSKKYLAHDEQNQAHIGDKV  60

Query  61  TIKESRPISKTKAWTLVEVVEVA  83
           +I E+RP+SKTK + L+EV+E A
Sbjct  61  SIMETRPLSKTKHFRLIEVIEKA  83



Lambda      K        H        a         alpha
   0.321    0.132    0.364    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 120400


  Database: b0d6aec704dd5c5b6d39607c343e4845.SwissProt.fasta
    Posted date:  May 9, 2024  2:50 AM
  Number of letters in database: 3,230
  Number of sequences in database:  36



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40