BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: bcab04244135e636a867ab3c3b983c60.SwissProt.fasta
28 sequences; 5,040 total letters
Query= ACIAD3207
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
Q6F7S4 Large ribosomal subunit protein uL5 [Acinetobacter baylyi ... 352 9e-130
B0V6V7 Large ribosomal subunit protein uL5 [Acinetobacter baumann... 341 2e-125
A3M972 Large ribosomal subunit protein uL5 [Acinetobacter baumann... 341 2e-125
B0VQT0 Large ribosomal subunit protein uL5 [Acinetobacter baumann... 341 2e-125
B7IA27 Large ribosomal subunit protein uL5 [Acinetobacter baumann... 341 2e-125
B7GW14 Large ribosomal subunit protein uL5 [Acinetobacter baumann... 341 2e-125
Q1QDH4 Large ribosomal subunit protein uL5 [Psychrobacter cryohal... 300 5e-109
Q4FUE4 Large ribosomal subunit protein uL5 [Psychrobacter arcticu... 299 7e-109
A5WCK2 Large ribosomal subunit protein uL5 [Psychrobacter sp. (st... 290 2e-105
C5BQ73 Large ribosomal subunit protein uL5 [Teredinibacter turner... 275 2e-99
A4VHP2 Large ribosomal subunit protein uL5 [Stutzerimonas stutzer... 275 3e-99
Q9HWE7 Large ribosomal subunit protein uL5 [Pseudomonas aeruginos... 274 6e-99
Q02T68 Large ribosomal subunit protein uL5 [Pseudomonas aeruginos... 274 6e-99
B7V656 Large ribosomal subunit protein uL5 [Pseudomonas aeruginos... 274 6e-99
A6UZK0 Large ribosomal subunit protein uL5 [Pseudomonas aeruginos... 274 8e-99
B3PK49 Large ribosomal subunit protein uL5 [Cellvibrio japonicus ... 273 2e-98
P62399 Large ribosomal subunit protein uL5 [Escherichia coli (str... 259 5e-93
P46178 Large ribosomal subunit protein uL5 [Buchnera aphidicola s... 259 5e-93
P62405 Large ribosomal subunit protein uL5 [Salmonella typhimuriu... 259 7e-93
P33098 Large ribosomal subunit protein uL5 [Micrococcus luteus] 234 9e-83
P12877 Large ribosomal subunit protein uL5 [Bacillus subtilis (st... 230 1e-81
P08895 Large ribosomal subunit protein uL5 [Geobacillus stearothe... 230 2e-81
P14807 Large ribosomal subunit protein uL5c [Cyanophora paradoxa] 214 5e-75
Q9ZI40 Large ribosomal subunit protein uL5 [Aquifex pyrophilus] 210 1e-73
P24315 Large ribosomal subunit protein uL5 [Thermus aquaticus] 208 7e-73
P41201 Large ribosomal subunit protein uL5 [Thermus thermophilus] 207 2e-72
Q5SHQ0 Large ribosomal subunit protein uL5 [Thermus thermophilus ... 207 2e-72
P38517 Large ribosomal subunit protein uL5 [Thermotoga maritima (... 201 8e-70
>Q6F7S4 Large ribosomal subunit protein uL5 [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=178
Score = 352 bits (903), Expect = 9e-130
Identities = 178/178 (100%), Positives = 178/178 (100%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI
Sbjct 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK
Sbjct 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK
Sbjct 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
>B0V6V7 Large ribosomal subunit protein uL5 [Acinetobacter baumannii
(strain AYE)]
Length=178
Score = 341 bits (875), Expect = 2e-125
Identities = 171/178 (96%), Positives = 175/178 (98%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK RYN+ELKAKLQ+EL IKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI
Sbjct 1 MARLKARYNDELKAKLQEELSIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRG+QMYEFLDRLISIAIPRIRDFRGFS+K
Sbjct 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGDQMYEFLDRLISIAIPRIRDFRGFSAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMR FGFPFK
Sbjct 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRAFGFPFK 178
>A3M972 Large ribosomal subunit protein uL5 [Acinetobacter baumannii
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755
/ 5377)]
Length=178
Score = 341 bits (875), Expect = 2e-125
Identities = 171/178 (96%), Positives = 175/178 (98%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK RYN+ELKAKLQ+EL IKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI
Sbjct 1 MARLKARYNDELKAKLQEELSIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRG+QMYEFLDRLISIAIPRIRDFRGFS+K
Sbjct 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGDQMYEFLDRLISIAIPRIRDFRGFSAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMR FGFPFK
Sbjct 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRAFGFPFK 178
>B0VQT0 Large ribosomal subunit protein uL5 [Acinetobacter baumannii
(strain SDF)]
Length=178
Score = 341 bits (875), Expect = 2e-125
Identities = 171/178 (96%), Positives = 175/178 (98%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK RYN+ELKAKLQ+EL IKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI
Sbjct 1 MARLKARYNDELKAKLQEELSIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRG+QMYEFLDRLISIAIPRIRDFRGFS+K
Sbjct 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGDQMYEFLDRLISIAIPRIRDFRGFSAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMR FGFPFK
Sbjct 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRAFGFPFK 178
>B7IA27 Large ribosomal subunit protein uL5 [Acinetobacter baumannii
(strain AB0057)]
Length=178
Score = 341 bits (875), Expect = 2e-125
Identities = 171/178 (96%), Positives = 175/178 (98%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK RYN+ELKAKLQ+EL IKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI
Sbjct 1 MARLKARYNDELKAKLQEELSIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRG+QMYEFLDRLISIAIPRIRDFRGFS+K
Sbjct 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGDQMYEFLDRLISIAIPRIRDFRGFSAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMR FGFPFK
Sbjct 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRAFGFPFK 178
>B7GW14 Large ribosomal subunit protein uL5 [Acinetobacter baumannii
(strain AB307-0294)]
Length=178
Score = 341 bits (875), Expect = 2e-125
Identities = 171/178 (96%), Positives = 175/178 (98%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK RYN+ELKAKLQ+EL IKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI
Sbjct 1 MARLKARYNDELKAKLQEELSIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRG+QMYEFLDRLISIAIPRIRDFRGFS+K
Sbjct 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGDQMYEFLDRLISIAIPRIRDFRGFSAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMR FGFPFK
Sbjct 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRAFGFPFK 178
>Q1QDH4 Large ribosomal subunit protein uL5 [Psychrobacter cryohalolentis
(strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 /
K5)]
Length=178
Score = 300 bits (767), Expect = 5e-109
Identities = 142/178 (80%), Positives = 167/178 (94%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK+ YNEELK ++++ELG+ NVM++P+ITKITLNMGVG A+ DKKLL+GAVADM I
Sbjct 1 MARLKSLYNEELKQQIKEELGLANVMQVPKITKITLNMGVGGASQDKKLLEGAVADMTAI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQKPVVT ARKS+AGFKIR+ WPIGCKVTLRGEQMYEFLDRLI+IAIPRIRDFRGFS K
Sbjct 61 AGQKPVVTKARKSVAGFKIREEWPIGCKVTLRGEQMYEFLDRLIAIAIPRIRDFRGFSPK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
+FDGRGNYS+G+KEQIVFPE+DFDKIDRIRGMD+TITT+A++D+EGRAL++ FGFPFK
Sbjct 121 AFDGRGNYSLGIKEQIVFPEVDFDKIDRIRGMDVTITTSAQSDEEGRALLKAFGFPFK 178
>Q4FUE4 Large ribosomal subunit protein uL5 [Psychrobacter arcticus
(strain DSM 17307 / VKM B-2377 / 273-4)]
Length=178
Score = 299 bits (766), Expect = 7e-109
Identities = 141/178 (79%), Positives = 167/178 (94%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK+ YNEELK ++++ELG+ NVM++P+ITKITLNMGVG A+ DKKLL+GAVADM I
Sbjct 1 MARLKSLYNEELKQQIKEELGLANVMQVPKITKITLNMGVGGASQDKKLLEGAVADMTAI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQKPVVT ARKS+AGFKIR+ WPIGCKVTLRGEQMYEFLDRL++IAIPRIRDFRGFS K
Sbjct 61 AGQKPVVTKARKSVAGFKIREEWPIGCKVTLRGEQMYEFLDRLVAIAIPRIRDFRGFSPK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
+FDGRGNYS+G+KEQIVFPE+DFDKIDRIRGMD+TITT+A++D+EGRAL++ FGFPFK
Sbjct 121 AFDGRGNYSLGIKEQIVFPEVDFDKIDRIRGMDVTITTSAQSDEEGRALLKAFGFPFK 178
>A5WCK2 Large ribosomal subunit protein uL5 [Psychrobacter sp.
(strain PRwf-1)]
Length=178
Score = 290 bits (743), Expect = 2e-105
Identities = 135/178 (76%), Positives = 165/178 (93%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK+ YN++ K +++ ELG++NVM++P+ITKITLNMGVG A+ DKKLL+GAVADM I
Sbjct 1 MARLKSLYNDQYKQQIKDELGLENVMQVPKITKITLNMGVGGASQDKKLLEGAVADMTAI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQKPV+T ARKS+AGFKIR+ WPIGCKVTLRGEQMYEFLDRLI+IAIPRIRDFRGFS K
Sbjct 61 AGQKPVITKARKSVAGFKIREEWPIGCKVTLRGEQMYEFLDRLIAIAIPRIRDFRGFSPK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
+FDGRGNYS+G+KEQIVFPE+D+DKIDR+RG+DITITT+A+ D++GRAL++ FGFPFK
Sbjct 121 AFDGRGNYSLGIKEQIVFPEVDYDKIDRLRGLDITITTSAQDDEQGRALLKAFGFPFK 178
>C5BQ73 Large ribosomal subunit protein uL5 [Teredinibacter turnerae
(strain ATCC 39867 / T7901)]
Length=179
Score = 275 bits (704), Expect = 2e-99
Identities = 128/178 (72%), Positives = 158/178 (89%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK +Y E+ KL++ELG+ NVMEIPRITKITLNMGVG A DKK+L+ AVAD++ I
Sbjct 1 MARLKEKYLNEIAPKLKEELGVANVMEIPRITKITLNMGVGEAIGDKKVLENAVADLEKI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQKPV+T ARKSIAGFK+R+GWP+GCKVTLR E+MYEFLDRL+SIAIPR+RDFRG S K
Sbjct 61 AGQKPVITKARKSIAGFKVREGWPVGCKVTLRRERMYEFLDRLVSIAIPRVRDFRGISPK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
FDGRGN+SMG+ EQI+FPEI++DK+D++RG+DI I+TTART++EGRAL++ F FPFK
Sbjct 121 QFDGRGNFSMGVNEQIIFPEIEYDKVDKLRGLDICISTTARTNEEGRALLKAFSFPFK 178
>A4VHP2 Large ribosomal subunit protein uL5 [Stutzerimonas stutzeri
(strain A1501)]
Length=179
Score = 275 bits (703), Expect = 3e-99
Identities = 129/178 (72%), Positives = 158/178 (89%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK Y +E+ KL++EL +KNVME+PRITKITLNMG+G A DKK++D AVAD++ I
Sbjct 1 MARLKEVYRKEIAPKLKEELQLKNVMEVPRITKITLNMGIGEAIGDKKIIDNAVADLEKI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
GQK VVT ARKSIAGFK+R+GWPIG KVTLR ++MYEFLDRL+SI++PR+RDFRG ++K
Sbjct 61 TGQKVVVTHARKSIAGFKVREGWPIGVKVTLRSDRMYEFLDRLLSISLPRVRDFRGLNAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMG+KEQI+FPEID+DKID +RG+DIT+TTTARTDDEGRAL+R F FPF+
Sbjct 121 SFDGRGNYSMGVKEQIIFPEIDYDKIDALRGLDITLTTTARTDDEGRALLRAFNFPFR 178
>Q9HWE7 Large ribosomal subunit protein uL5 [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=179
Score = 274 bits (701), Expect = 6e-99
Identities = 128/178 (72%), Positives = 158/178 (89%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK Y +E+ KL++EL + NVME+PR+TKITLNMG+G A DKK+++ AVAD++ I
Sbjct 1 MARLKEIYRKEIAPKLKEELQLANVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
GQKPVVT ARKSIAGFKIR+GWPIG KVTLR ++MYEFLDRL+SI++PR+RDFRG ++K
Sbjct 61 TGQKPVVTYARKSIAGFKIREGWPIGVKVTLRSDRMYEFLDRLLSISLPRVRDFRGLNAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMG+KEQI+FPEID+DKID +RG+DIT+TTTARTDDEGRAL+R F FPF+
Sbjct 121 SFDGRGNYSMGVKEQIIFPEIDYDKIDALRGLDITLTTTARTDDEGRALLRAFKFPFR 178
>Q02T68 Large ribosomal subunit protein uL5 [Pseudomonas aeruginosa
(strain UCBPP-PA14)]
Length=179
Score = 274 bits (701), Expect = 6e-99
Identities = 128/178 (72%), Positives = 158/178 (89%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK Y +E+ KL++EL + NVME+PR+TKITLNMG+G A DKK+++ AVAD++ I
Sbjct 1 MARLKEIYRKEIAPKLKEELQLANVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
GQKPVVT ARKSIAGFKIR+GWPIG KVTLR ++MYEFLDRL+SI++PR+RDFRG ++K
Sbjct 61 TGQKPVVTYARKSIAGFKIREGWPIGVKVTLRSDRMYEFLDRLLSISLPRVRDFRGLNAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMG+KEQI+FPEID+DKID +RG+DIT+TTTARTDDEGRAL+R F FPF+
Sbjct 121 SFDGRGNYSMGVKEQIIFPEIDYDKIDALRGLDITLTTTARTDDEGRALLRAFKFPFR 178
>B7V656 Large ribosomal subunit protein uL5 [Pseudomonas aeruginosa
(strain LESB58)]
Length=179
Score = 274 bits (701), Expect = 6e-99
Identities = 128/178 (72%), Positives = 158/178 (89%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK Y +E+ KL++EL + NVME+PR+TKITLNMG+G A DKK+++ AVAD++ I
Sbjct 1 MARLKEIYRKEIAPKLKEELQLANVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
GQKPVVT ARKSIAGFKIR+GWPIG KVTLR ++MYEFLDRL+SI++PR+RDFRG ++K
Sbjct 61 TGQKPVVTYARKSIAGFKIREGWPIGVKVTLRSDRMYEFLDRLLSISLPRVRDFRGLNAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMG+KEQI+FPEID+DKID +RG+DIT+TTTARTDDEGRAL+R F FPF+
Sbjct 121 SFDGRGNYSMGVKEQIIFPEIDYDKIDALRGLDITLTTTARTDDEGRALLRAFKFPFR 178
>A6UZK0 Large ribosomal subunit protein uL5 [Pseudomonas aeruginosa
(strain PA7)]
Length=179
Score = 274 bits (700), Expect = 8e-99
Identities = 127/178 (71%), Positives = 158/178 (89%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK Y +E+ KL++EL + NVME+PR+TKITLNMG+G A DKK+++ AVAD++ I
Sbjct 1 MARLKEIYRKEIAPKLKEELQLANVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
GQKP+VT ARKSIAGFKIR+GWPIG KVTLR ++MYEFLDRL+SI++PR+RDFRG ++K
Sbjct 61 TGQKPIVTYARKSIAGFKIREGWPIGVKVTLRSDRMYEFLDRLLSISLPRVRDFRGLNAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMG+KEQI+FPEID+DKID +RG+DIT+TTTARTDDEGRAL+R F FPF+
Sbjct 121 SFDGRGNYSMGVKEQIIFPEIDYDKIDALRGLDITLTTTARTDDEGRALLRAFKFPFR 178
>B3PK49 Large ribosomal subunit protein uL5 [Cellvibrio japonicus
(strain Ueda107)]
Length=179
Score = 273 bits (698), Expect = 2e-98
Identities = 131/178 (74%), Positives = 155/178 (87%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MARLK Y +EL KL++ELG+ NVME+PRITKIT+NMGVG A DKK+L+ AV D+ I
Sbjct 1 MARLKELYTKELAPKLKEELGLANVMEVPRITKITINMGVGEAVGDKKVLENAVNDLVKI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQK VVT +RKSIAGFKIRDGWPIGCKVTLR ++MYEFLDRLI++AIPRIRDFRG S K
Sbjct 61 AGQKVVVTKSRKSIAGFKIRDGWPIGCKVTLRKDRMYEFLDRLIAVAIPRIRDFRGISPK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
FDGRGN+SMG+ EQI+FPEID+DK+DR+RG+DI ITTTARTD+EGRAL++ F FPFK
Sbjct 121 QFDGRGNFSMGVTEQIIFPEIDYDKVDRLRGLDICITTTARTDEEGRALLKAFNFPFK 178
>P62399 Large ribosomal subunit protein uL5 [Escherichia coli
(strain K12)]
Length=179
Score = 259 bits (662), Expect = 5e-93
Identities = 120/178 (67%), Positives = 151/178 (85%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MA+L Y +E+ KL E +VM++PR+ KITLNMGVG A DKKLLD A AD+ I
Sbjct 1 MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
+GQKP++T ARKS+AGFKIR G+PIGCKVTLRGE+M+EF +RLI+IA+PRIRDFRG S+K
Sbjct 61 SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMG++EQI+FPEID+DK+DR+RG+DITITTTA++D+EGRAL+ F FPF+
Sbjct 121 SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFR 178
>P46178 Large ribosomal subunit protein uL5 [Buchnera aphidicola
subsp. Acyrthosiphon kondoi]
Length=179
Score = 259 bits (662), Expect = 5e-93
Identities = 120/178 (67%), Positives = 151/178 (85%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MA+L Y +E+ +L + +VM++PR+ KITLNMGVG A DKKLLD A AD+ I
Sbjct 1 MAKLHDYYKDEVIKQLMSQFDYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
+GQKP++T ARKS+AGFKIR G+PIGCKVTLRGE+M+EF +RLISIA+PRIRDFRG S+K
Sbjct 61 SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLISIAVPRIRDFRGLSAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMG++EQI+FPEID+DK+DR+RG+DITITTTA++DDEGRAL+ F FPF+
Sbjct 121 SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDDEGRALLAAFNFPFR 178
>P62405 Large ribosomal subunit protein uL5 [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=179
Score = 259 bits (661), Expect = 7e-93
Identities = 120/178 (67%), Positives = 151/178 (85%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
MA+L Y +E+ KL E +VM++PR+ KITLNMGVG A DKKLLD A AD+ I
Sbjct 1 MAKLHDYYKDEVVNKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLTAI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
+GQKP++T ARKS+AGFKIR G+PIGCKVTLRGE+M+EF +RLI+IA+PRIRDFRG S+K
Sbjct 61 SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNYSMG++EQI+FPEID+DK+DR+RG+DITITTTA++D+EGRAL+ F FPF+
Sbjct 121 SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFR 178
>P33098 Large ribosomal subunit protein uL5 [Micrococcus luteus]
Length=191
Score = 234 bits (596), Expect = 9e-83
Identities = 107/176 (61%), Positives = 139/176 (79%), Gaps = 0/176 (0%)
Query 3 RLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLIAG 62
RLKT+Y EE++ +LQ++ NVM++P + K+ +NMGVG AA D K++D AV D+ I G
Sbjct 13 RLKTKYREEIRGRLQEQFQYGNVMQVPGLVKVVVNMGVGEAAKDSKIIDDAVTDLTAITG 72
Query 63 QKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSKSF 122
QKP++T ARKSIA FK+R+G PIG TLRG++M+EFLDRL+++ +PRIRDFRG S + F
Sbjct 73 QKPMITKARKSIAQFKLREGMPIGTHATLRGDRMWEFLDRLVTLPLPRIRDFRGLSDRQF 132
Query 123 DGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
DG GNY+ GL EQ VF EID DKIDR+RGMDIT+ TTA+ DDEGRAL++ GFPFK
Sbjct 133 DGNGNYTFGLSEQTVFHEIDQDKIDRVRGMDITVVTTAKNDDEGRALLKALGFPFK 188
>P12877 Large ribosomal subunit protein uL5 [Bacillus subtilis
(strain 168)]
Length=179
Score = 230 bits (587), Expect = 1e-81
Identities = 105/178 (59%), Positives = 141/178 (79%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
M RLK +YN+E+ L + +VM++P+I KI +NMGVG A + K +D AV ++ I
Sbjct 1 MNRLKEKYNKEIAPALMTKFNYDSVMQVPKIEKIVINMGVGDAVQNAKAIDSAVEELTFI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQKPVVT A+KSIAGF++R+G PIG KVTLRGE+MY+FLD+LIS+++PR+RDFRG S K
Sbjct 61 AGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFLDKLISVSLPRVRDFRGVSKK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
SFDGRGNY++G+KEQ++FPEID+DK+ ++RGMDI I TTA TD+E R L+ G PF+
Sbjct 121 SFDGRGNYTLGIKEQLIFPEIDYDKVTKVRGMDIVIVTTANTDEEARELLTQVGMPFQ 178
>P08895 Large ribosomal subunit protein uL5 [Geobacillus stearothermophilus]
Length=179
Score = 230 bits (586), Expect = 2e-81
Identities = 105/178 (59%), Positives = 142/178 (80%), Gaps = 0/178 (0%)
Query 1 MARLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI 60
M RLK +Y +E+ L + K++M++P+I KI +NMGVG A + K LD AV ++ LI
Sbjct 1 MNRLKEKYVKEVVPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLI 60
Query 61 AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSK 120
AGQ+PVVT A+KSIAGF++R G PIG KVTLRGE+MYEFLD+LIS+++PR+RDFRG S K
Sbjct 61 AGQRPVVTRAKKSIAGFRLRQGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFRGVSKK 120
Query 121 SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
+FDGRGNY++G+KEQ++FPEID+DK++++RGMDI I TTA TD+E R L+ G PF+
Sbjct 121 AFDGRGNYTLGIKEQLIFPEIDYDKVNKVRGMDIVIVTTANTDEEARELLALLGMPFQ 178
>P14807 Large ribosomal subunit protein uL5c [Cyanophora paradoxa]
Length=181
Score = 214 bits (544), Expect = 5e-75
Identities = 99/175 (57%), Positives = 138/175 (79%), Gaps = 0/175 (0%)
Query 3 RLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLIAG 62
RLKT Y +E+ +L KN+ E+P++ KIT+N G+G AA + K+L+ +V ++ I G
Sbjct 4 RLKTVYEQEVIKQLMTRFQYKNIHEVPKLKKITVNRGLGEAAQNAKILEASVKEITEITG 63
Query 63 QKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSKSF 122
QK +VT A+K+IAGFK+R PIG VTLRG+ MY FLDRLI++++PRIRDFRG ++KSF
Sbjct 64 QKAIVTRAKKAIAGFKLRQDMPIGVMVTLRGDYMYAFLDRLINLSLPRIRDFRGITAKSF 123
Query 123 DGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPF 177
DGRGNY++GLKEQ++FPE+D+D I++IRGMDI+I TTA+TD EG AL+++ G PF
Sbjct 124 DGRGNYNLGLKEQLIFPEVDYDGIEQIRGMDISIVTTAKTDQEGLALLKSLGMPF 178
>Q9ZI40 Large ribosomal subunit protein uL5 [Aquifex pyrophilus]
Length=188
Score = 210 bits (535), Expect = 1e-73
Identities = 100/176 (57%), Positives = 131/176 (74%), Gaps = 0/176 (0%)
Query 3 RLKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLIAG 62
RL +Y EE+ KL Q+ KN M++PR+ KI +NMGVG A D K L+ AV D++ I G
Sbjct 11 RLYKKYKEEVVPKLIQKFQYKNPMQVPRLVKIVVNMGVGEAVQDIKQLERAVEDLRAITG 70
Query 63 QKPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSKSF 122
Q+P++T ARKS AGFK+R G PIGCKVTLR M++FLD++IS+A+PR++DF+G + +SF
Sbjct 71 QQPMITRARKSKAGFKLRKGMPIGCKVTLRNHTMWDFLDKVISVALPRVKDFKGLNPRSF 130
Query 123 DGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
DGRGNY+ G+ EQIVFPEID+DK+DRIRGMDI I TTA +D E T G P +
Sbjct 131 DGRGNYAFGIAEQIVFPEIDYDKVDRIRGMDIIINTTAVSDQESLLATLTLGLPIR 186
>P24315 Large ribosomal subunit protein uL5 [Thermus aquaticus]
Length=182
Score = 208 bits (530), Expect = 7e-73
Identities = 92/175 (53%), Positives = 136/175 (78%), Gaps = 0/175 (0%)
Query 4 LKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLIAGQ 63
LK +Y +E++ +L + G +N+ E+PR+ K+ +N G+G A D ++L+ A ++ LIAGQ
Sbjct 7 LKKKYYDEVRPELIRRFGYQNIWEVPRLEKVVINQGLGEAKEDARILEKASKELALIAGQ 66
Query 64 KPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSKSFD 123
KP +T A+KSI+ FK+R G PIG +VTLRG++M+ FL++L+S+A+PRIRDFRG + SFD
Sbjct 67 KPAITRAKKSISNFKLRKGMPIGLRVTLRGDRMWIFLEKLLSVALPRIRDFRGLNPNSFD 126
Query 124 GRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
GRGNY++GLKEQ++FPEI +D +D RGMDI + TTA+TD+E +AL+ GFPF+
Sbjct 127 GRGNYNLGLKEQLIFPEITYDMVDVPRGMDIAVVTTAKTDEEAKALLELLGFPFR 181
>P41201 Large ribosomal subunit protein uL5 [Thermus thermophilus]
Length=182
Score = 207 bits (527), Expect = 2e-72
Identities = 92/175 (53%), Positives = 134/175 (77%), Gaps = 0/175 (0%)
Query 4 LKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLIAGQ 63
LK +Y EE++ +L + G +NV E+PR+ K+ +N G+G A D ++L+ A ++ LI GQ
Sbjct 7 LKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQ 66
Query 64 KPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSKSFD 123
KP VT A+KSI+ FK+R G PIG +VTLR ++M+ FL++L+++A+PRIRDFRG + SFD
Sbjct 67 KPAVTRAKKSISNFKLRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFD 126
Query 124 GRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
GRGNY++GL+EQ++FPEI +D +D +RGMDI + TTA TD+E RAL+ GFPF+
Sbjct 127 GRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAETDEEARALLELLGFPFR 181
>Q5SHQ0 Large ribosomal subunit protein uL5 [Thermus thermophilus
(strain ATCC 27634 / DSM 579 / HB8)]
Length=182
Score = 207 bits (527), Expect = 2e-72
Identities = 92/175 (53%), Positives = 134/175 (77%), Gaps = 0/175 (0%)
Query 4 LKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLIAGQ 63
LK +Y EE++ +L + G +NV E+PR+ K+ +N G+G A D ++L+ A ++ LI GQ
Sbjct 7 LKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQ 66
Query 64 KPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSKSFD 123
KP VT A+KSI+ FK+R G PIG +VTLR ++M+ FL++L+++A+PRIRDFRG + SFD
Sbjct 67 KPAVTRAKKSISNFKLRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFD 126
Query 124 GRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
GRGNY++GL+EQ++FPEI +D +D +RGMDI + TTA TD+E RAL+ GFPF+
Sbjct 127 GRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAETDEEARALLELLGFPFR 181
>P38517 Large ribosomal subunit protein uL5 [Thermotoga maritima
(strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 /
MSB8)]
Length=184
Score = 201 bits (510), Expect = 8e-70
Identities = 94/175 (54%), Positives = 127/175 (73%), Gaps = 0/175 (0%)
Query 4 LKTRYNEELKAKLQQELGIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLIAGQ 63
LK +Y +E+ L +E KN+ ++P++ KI +NMG+G + + L++ ++ I GQ
Sbjct 8 LKDQYEKEIVPALMKEFNYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQ 67
Query 64 KPVVTLARKSIAGFKIRDGWPIGCKVTLRGEQMYEFLDRLISIAIPRIRDFRGFSSKSFD 123
KP+VT ARKSI+ FKIR G PIG KVTLRG +MY FL +LI+I +P++RDFRG SFD
Sbjct 68 KPIVTRARKSISNFKIRKGMPIGLKVTLRGARMYNFLYKLINIVLPKVRDFRGLDPNSFD 127
Query 124 GRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRTFGFPFK 178
GRGNYS GL EQ+VFPE++ D++ RI+GMDITI TTA+TD E R L+ FG PFK
Sbjct 128 GRGNYSFGLSEQLVFPELNPDEVRRIQGMDITIVTTAKTDQEARRLLELFGMPFK 182
Lambda K H a alpha
0.327 0.143 0.414 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 537096
Database: bcab04244135e636a867ab3c3b983c60.SwissProt.fasta
Posted date: May 20, 2024 9:21 AM
Number of letters in database: 5,040
Number of sequences in database: 28
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40