Comparative Genomics

ACIAD3200 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 153ef7602a32f9d6a70cf222dc205e33.SwissProt.fasta
           25 sequences; 3,751 total letters



Query= ACIAD3200

Length=147
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6F7T1 Large ribosomal subunit protein uL15 [Acinetobacter baylyi...  280     3e-102
A3M965 Large ribosomal subunit protein uL15 [Acinetobacter bauman...  270     2e-98 
B0VQT7 Large ribosomal subunit protein uL15 [Acinetobacter bauman...  270     2e-98 
B2HZ89 Large ribosomal subunit protein uL15 [Acinetobacter bauman...  270     2e-98 
B7IA20 Large ribosomal subunit protein uL15 [Acinetobacter bauman...  270     2e-98 
B7GW21 Large ribosomal subunit protein uL15 [Acinetobacter bauman...  270     2e-98 
Q4FUD7 Large ribosomal subunit protein uL15 [Psychrobacter arctic...  214     3e-76 
A5WCK9 Large ribosomal subunit protein uL15 [Psychrobacter sp. (s...  211     7e-75 
Q1QDG7 Large ribosomal subunit protein uL15 [Psychrobacter cryoha...  209     2e-74 
Q0VSI4 Large ribosomal subunit protein uL15 [Alcanivorax borkumen...  202     8e-72 
P44353 Large ribosomal subunit protein uL15 [Haemophilus influenz...  196     2e-69 
A5UDS8 Large ribosomal subunit protein uL15 [Haemophilus influenz...  196     2e-69 
A5UHV0 Large ribosomal subunit protein uL15 [Haemophilus influenz...  196     3e-69 
C6DG55 Large ribosomal subunit protein uL15 [Pectobacterium carot...  195     9e-69 
B8F6Q2 Large ribosomal subunit protein uL15 [Glaesserella parasui...  194     1e-68 
P02413 Large ribosomal subunit protein uL15 [Escherichia coli (st...  192     2e-67 
P46185 Large ribosomal subunit protein uL15 [Buchnera aphidicola ...  191     3e-67 
Q5E895 Large ribosomal subunit protein uL15 [Aliivibrio fischeri ...  186     4e-65 
P38373 Large ribosomal subunit protein uL15 [Halalkalibacterium h...  129     1e-42 
P04452 Large ribosomal subunit protein uL15 [Geobacillus stearoth...  123     2e-40 
P35138 Large ribosomal subunit protein uL15 [Bacillus licheniform...  122     7e-40 
P19946 Large ribosomal subunit protein uL15 [Bacillus subtilis (s...  120     3e-39 
P35139 Large ribosomal subunit protein uL15 [Staphylococcus carno...  114     5e-37 
P31160 Large ribosomal subunit protein uL15 [Synechococcus elonga...  100     2e-31 
P31165 Large ribosomal subunit protein uL15c [Pisum sativum]          94.0    9e-28 


>Q6F7T1 Large ribosomal subunit protein uL15 [Acinetobacter baylyi 
(strain ATCC 33305 / BD413 / ADP1)]
Length=146

 Score = 280 bits (715),  Expect = 3e-102
 Identities = 146/146 (100%), Positives = 146/146 (100%), Gaps = 0/146 (0%)

Query  1    MTLRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIY  60
            MTLRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIY
Sbjct  1    MTLRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIY  60

Query  61   RRLPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTR  120
            RRLPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTR
Sbjct  61   RRLPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTR  120

Query  121  AFTVQGVALTKGAQAAIEAAGGKVEE  146
            AFTVQGVALTKGAQAAIEAAGGKVEE
Sbjct  121  AFTVQGVALTKGAQAAIEAAGGKVEE  146


>A3M965 Large ribosomal subunit protein uL15 [Acinetobacter baumannii 
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 
/ 5377)]
Length=146

 Score = 270 bits (690),  Expect = 2e-98
 Identities = 137/146 (94%), Positives = 146/146 (100%), Gaps = 0/146 (0%)

Query  1    MTLRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIY  60
            MTLRLNELAPAEGAKR++RRLGRGIGSGVGKTGGRG+KGQKSRKSGGVRPGFEGGQTAIY
Sbjct  1    MTLRLNELAPAEGAKREHRRLGRGIGSGVGKTGGRGIKGQKSRKSGGVRPGFEGGQTAIY  60

Query  61   RRLPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTR  120
            RRLPKFGFTSQIALKTAEVRLSEL+KVEG+IVSLETLKAANVVRRDQ+RAR+VLSGE+TR
Sbjct  61   RRLPKFGFTSQIALKTAEVRLSELSKVEGDIVSLETLKAANVVRRDQIRARIVLSGEITR  120

Query  121  AFTVQGVALTKGAQAAIEAAGGKVEE  146
            AFTVQGVALTKGA+AAIEAAGGKVEE
Sbjct  121  AFTVQGVALTKGAKAAIEAAGGKVEE  146


>B0VQT7 Large ribosomal subunit protein uL15 [Acinetobacter baumannii 
(strain SDF)]
Length=146

 Score = 270 bits (690),  Expect = 2e-98
 Identities = 137/146 (94%), Positives = 146/146 (100%), Gaps = 0/146 (0%)

Query  1    MTLRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIY  60
            MTLRLNELAPAEGAKR++RRLGRGIGSGVGKTGGRG+KGQKSRKSGGVRPGFEGGQTAIY
Sbjct  1    MTLRLNELAPAEGAKREHRRLGRGIGSGVGKTGGRGIKGQKSRKSGGVRPGFEGGQTAIY  60

Query  61   RRLPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTR  120
            RRLPKFGFTSQIALKTAEVRLSEL+KVEG+IVSLETLKAANVVRRDQ+RAR+VLSGE+TR
Sbjct  61   RRLPKFGFTSQIALKTAEVRLSELSKVEGDIVSLETLKAANVVRRDQIRARIVLSGEITR  120

Query  121  AFTVQGVALTKGAQAAIEAAGGKVEE  146
            AFTVQGVALTKGA+AAIEAAGGKVEE
Sbjct  121  AFTVQGVALTKGAKAAIEAAGGKVEE  146


>B2HZ89 Large ribosomal subunit protein uL15 [Acinetobacter baumannii 
(strain ACICU)]
Length=146

 Score = 270 bits (690),  Expect = 2e-98
 Identities = 137/146 (94%), Positives = 146/146 (100%), Gaps = 0/146 (0%)

Query  1    MTLRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIY  60
            MTLRLNELAPAEGAKR++RRLGRGIGSGVGKTGGRG+KGQKSRKSGGVRPGFEGGQTAIY
Sbjct  1    MTLRLNELAPAEGAKREHRRLGRGIGSGVGKTGGRGIKGQKSRKSGGVRPGFEGGQTAIY  60

Query  61   RRLPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTR  120
            RRLPKFGFTSQIALKTAEVRLSEL+KVEG+IVSLETLKAANVVRRDQ+RAR+VLSGE+TR
Sbjct  61   RRLPKFGFTSQIALKTAEVRLSELSKVEGDIVSLETLKAANVVRRDQIRARIVLSGEITR  120

Query  121  AFTVQGVALTKGAQAAIEAAGGKVEE  146
            AFTVQGVALTKGA+AAIEAAGGKVEE
Sbjct  121  AFTVQGVALTKGAKAAIEAAGGKVEE  146


>B7IA20 Large ribosomal subunit protein uL15 [Acinetobacter baumannii 
(strain AB0057)]
Length=146

 Score = 270 bits (690),  Expect = 2e-98
 Identities = 137/146 (94%), Positives = 146/146 (100%), Gaps = 0/146 (0%)

Query  1    MTLRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIY  60
            MTLRLNELAPAEGAKR++RRLGRGIGSGVGKTGGRG+KGQKSRKSGGVRPGFEGGQTAIY
Sbjct  1    MTLRLNELAPAEGAKREHRRLGRGIGSGVGKTGGRGIKGQKSRKSGGVRPGFEGGQTAIY  60

Query  61   RRLPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTR  120
            RRLPKFGFTSQIALKTAEVRLSEL+KVEG+IVSLETLKAANVVRRDQ+RAR+VLSGE+TR
Sbjct  61   RRLPKFGFTSQIALKTAEVRLSELSKVEGDIVSLETLKAANVVRRDQIRARIVLSGEITR  120

Query  121  AFTVQGVALTKGAQAAIEAAGGKVEE  146
            AFTVQGVALTKGA+AAIEAAGGKVEE
Sbjct  121  AFTVQGVALTKGAKAAIEAAGGKVEE  146


>B7GW21 Large ribosomal subunit protein uL15 [Acinetobacter baumannii 
(strain AB307-0294)]
Length=146

 Score = 270 bits (690),  Expect = 2e-98
 Identities = 137/146 (94%), Positives = 146/146 (100%), Gaps = 0/146 (0%)

Query  1    MTLRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIY  60
            MTLRLNELAPAEGAKR++RRLGRGIGSGVGKTGGRG+KGQKSRKSGGVRPGFEGGQTAIY
Sbjct  1    MTLRLNELAPAEGAKREHRRLGRGIGSGVGKTGGRGIKGQKSRKSGGVRPGFEGGQTAIY  60

Query  61   RRLPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTR  120
            RRLPKFGFTSQIALKTAEVRLSEL+KVEG+IVSLETLKAANVVRRDQ+RAR+VLSGE+TR
Sbjct  61   RRLPKFGFTSQIALKTAEVRLSELSKVEGDIVSLETLKAANVVRRDQIRARIVLSGEITR  120

Query  121  AFTVQGVALTKGAQAAIEAAGGKVEE  146
            AFTVQGVALTKGA+AAIEAAGGKVEE
Sbjct  121  AFTVQGVALTKGAKAAIEAAGGKVEE  146


>Q4FUD7 Large ribosomal subunit protein uL15 [Psychrobacter arcticus 
(strain DSM 17307 / VKM B-2377 / 273-4)]
Length=146

 Score = 214 bits (544),  Expect = 3e-76
 Identities = 104/146 (71%), Positives = 127/146 (87%), Gaps = 0/146 (0%)

Query  1    MTLRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIY  60
            M LRLNEL+P  GAK+  +R GRGIGSG+GKTGGRGVKGQKSR    VR GFEGGQT +Y
Sbjct  1    MGLRLNELSPGVGAKKTAQRRGRGIGSGLGKTGGRGVKGQKSRSGSSVRSGFEGGQTPLY  60

Query  61   RRLPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTR  120
            RRLPKFGFTS++A+ TAEVRLSELN++EG++VS+ETLKAAN++RRD  RARV+LSGEVT+
Sbjct  61   RRLPKFGFTSKMAMTTAEVRLSELNQIEGDVVSIETLKAANLIRRDMKRARVMLSGEVTK  120

Query  121  AFTVQGVALTKGAQAAIEAAGGKVEE  146
            A+T +G+ +TKGA+ AIEAAGG +EE
Sbjct  121  AYTFKGIKVTKGAKQAIEAAGGSIEE  146


>A5WCK9 Large ribosomal subunit protein uL15 [Psychrobacter sp. 
(strain PRwf-1)]
Length=152

 Score = 211 bits (536),  Expect = 7e-75
 Identities = 102/145 (70%), Positives = 125/145 (86%), Gaps = 0/145 (0%)

Query  1    MTLRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIY  60
            M L+LNEL+P  GAK+   R GRGIGSG+GKTGGRGVKGQKSR   GVR GFEGGQ  ++
Sbjct  1    MGLKLNELSPGVGAKKTAHRKGRGIGSGLGKTGGRGVKGQKSRSGSGVRRGFEGGQMPLF  60

Query  61   RRLPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTR  120
            RR+PKFGFTSQ+AL TAEVRLSELNK++G++VS+ETLKAAN++R D  RAR++LSGE+T+
Sbjct  61   RRVPKFGFTSQMALTTAEVRLSELNKIDGDVVSVETLKAANIIRHDMKRARIILSGEITK  120

Query  121  AFTVQGVALTKGAQAAIEAAGGKVE  145
            A+T +GV +TKGA+AAIEAAGG VE
Sbjct  121  AYTFKGVKVTKGAKAAIEAAGGTVE  145


>Q1QDG7 Large ribosomal subunit protein uL15 [Psychrobacter cryohalolentis 
(strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 
/ K5)]
Length=146

 Score = 209 bits (532),  Expect = 2e-74
 Identities = 101/146 (69%), Positives = 126/146 (86%), Gaps = 0/146 (0%)

Query  1    MTLRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIY  60
            M LRLNEL+P  GAK+  +R GRGIGSG+GKTGGRGVKGQKSR    +R GFEGGQ  +Y
Sbjct  1    MGLRLNELSPGVGAKKTAQRRGRGIGSGLGKTGGRGVKGQKSRSGSSIRSGFEGGQMPLY  60

Query  61   RRLPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTR  120
            RRLPKFGFTS++A+ TAEVRLSEL+++EG++VS+ETLKAAN++RRD  RARV+LSGEVT+
Sbjct  61   RRLPKFGFTSKMAMTTAEVRLSELSQIEGDVVSIETLKAANLIRRDMKRARVMLSGEVTK  120

Query  121  AFTVQGVALTKGAQAAIEAAGGKVEE  146
            A+T +G+ +TKGA+ AIEAAGG +EE
Sbjct  121  AYTFKGIKVTKGAKQAIEAAGGSIEE  146


>Q0VSI4 Large ribosomal subunit protein uL15 [Alcanivorax borkumensis 
(strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2)]
Length=144

 Score = 202 bits (515),  Expect = 8e-72
 Identities = 97/144 (67%), Positives = 123/144 (85%), Gaps = 0/144 (0%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            +RLN+L PAEG++ + +R+GRGIGSG+GKTGGRG KGQKSR  G V+PGFEGGQ  + RR
Sbjct  1    MRLNDLHPAEGSRPEGKRVGRGIGSGLGKTGGRGHKGQKSRSGGSVKPGFEGGQMPLQRR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTRAF  122
            +PKFGFTS++A+ TAEVRL+EL KVEG+++ L +LKAAN+VRRD  RA++VL GE+ RA 
Sbjct  61   VPKFGFTSKLAMGTAEVRLAELAKVEGDVIDLASLKAANIVRRDMKRAKIVLQGEIDRAV  120

Query  123  TVQGVALTKGAQAAIEAAGGKVEE  146
            TV+GVALTKGA+ A+E AGGKVEE
Sbjct  121  TVRGVALTKGAREAVEKAGGKVEE  144


>P44353 Large ribosomal subunit protein uL15 [Haemophilus influenzae 
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=144

 Score = 196 bits (499),  Expect = 2e-69
 Identities = 99/144 (69%), Positives = 119/144 (83%), Gaps = 0/144 (0%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            +RLN L+PAEGAK   +RLGRGIGSG+GKTGGRG KGQKSR  GGVR GFEGGQ  +YRR
Sbjct  1    MRLNTLSPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGGGVRRGFEGGQMPLYRR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTRAF  122
            LPKFGFTS  +  TAEVRL+EL KVEG +V+LETLKAAN++ +D   A+V+L+GEV  A 
Sbjct  61   LPKFGFTSMKSAVTAEVRLNELTKVEGNVVTLETLKAANILTKDIQFAKVILAGEVKSAV  120

Query  123  TVQGVALTKGAQAAIEAAGGKVEE  146
            TV+G+ +TKGA+AAIEAAGG +EE
Sbjct  121  TVRGLRVTKGAKAAIEAAGGSIEE  144


>A5UDS8 Large ribosomal subunit protein uL15 [Haemophilus influenzae 
(strain PittEE)]
Length=144

 Score = 196 bits (499),  Expect = 2e-69
 Identities = 99/144 (69%), Positives = 119/144 (83%), Gaps = 0/144 (0%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            +RLN L+PAEGAK   +RLGRGIGSG+GKTGGRG KGQKSR  GGVR GFEGGQ  +YRR
Sbjct  1    MRLNTLSPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGGGVRRGFEGGQMPLYRR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTRAF  122
            LPKFGFTS  +  TAEVRL+EL KVEG +V+LETLKAAN++ +D   A+V+L+GEV  A 
Sbjct  61   LPKFGFTSMKSAVTAEVRLNELTKVEGNVVTLETLKAANILTKDIQFAKVILAGEVKSAV  120

Query  123  TVQGVALTKGAQAAIEAAGGKVEE  146
            TV+G+ +TKGA+AAIEAAGG +EE
Sbjct  121  TVRGLRVTKGAKAAIEAAGGSIEE  144


>A5UHV0 Large ribosomal subunit protein uL15 [Haemophilus influenzae 
(strain PittGG)]
Length=144

 Score = 196 bits (498),  Expect = 3e-69
 Identities = 98/144 (68%), Positives = 119/144 (83%), Gaps = 0/144 (0%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            +RLN L+PAEGAK   +RLGRGIGSG+GKTGGRG KGQKSR  GGVR GFEGGQ  +YRR
Sbjct  1    MRLNTLSPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGGGVRRGFEGGQMPLYRR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTRAF  122
            LPKFGFTS  +  TAEVRL+EL KVEG +V+LETLKAAN++ +D   A+V+L+GEV  A 
Sbjct  61   LPKFGFTSMKSAVTAEVRLNELTKVEGNVVTLETLKAANILTKDIQFAKVILAGEVKSAV  120

Query  123  TVQGVALTKGAQAAIEAAGGKVEE  146
            T++G+ +TKGA+AAIEAAGG +EE
Sbjct  121  TIRGLRVTKGAKAAIEAAGGSIEE  144


>C6DG55 Large ribosomal subunit protein uL15 [Pectobacterium carotovorum 
subsp. carotovorum (strain PC1)]
Length=144

 Score = 195 bits (495),  Expect = 9e-69
 Identities = 99/144 (69%), Positives = 119/144 (83%), Gaps = 0/144 (0%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            +RLN L+PAEGAK   +RLGRGIGSG+GKTGGRG KGQKSR  GGVR GFEGGQ  +YRR
Sbjct  1    MRLNTLSPAEGAKHAPKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTRAF  122
            LPKFGFTS+ A+ T+EVRLS+L KVEG++V L TLKAANV+      A+V+LSGEV R  
Sbjct  61   LPKFGFTSRKAMITSEVRLSDLAKVEGDVVDLNTLKAANVIGIQIEFAKVILSGEVARPV  120

Query  123  TVQGVALTKGAQAAIEAAGGKVEE  146
            T++G+ +TKGA+AAIEAAGGK+EE
Sbjct  121  TIRGLRVTKGARAAIEAAGGKIEE  144


>B8F6Q2 Large ribosomal subunit protein uL15 [Glaesserella parasuis 
serovar 5 (strain SH0165)]
Length=144

 Score = 194 bits (494),  Expect = 1e-68
 Identities = 96/144 (67%), Positives = 119/144 (83%), Gaps = 0/144 (0%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            +RLN L+PAEGAK   +RLGRGIGSG+GKTGGRG KGQKSR  GGVR GFEGGQ  +YRR
Sbjct  1    MRLNSLSPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGGGVRRGFEGGQMPLYRR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTRAF  122
            LPKFGFTS  AL  AE+RLS+L KV+G +V+L+ LKAANV+ +D + A+V+LSG+V +A 
Sbjct  61   LPKFGFTSLKALHVAEIRLSDLAKVDGNVVTLDALKAANVITKDILSAKVILSGKVEKAV  120

Query  123  TVQGVALTKGAQAAIEAAGGKVEE  146
             V+G+ +TKGA+AAIEAAGG +EE
Sbjct  121  VVKGLGVTKGAKAAIEAAGGSIEE  144


>P02413 Large ribosomal subunit protein uL15 [Escherichia coli 
(strain K12)]
Length=144

 Score = 192 bits (487),  Expect = 2e-67
 Identities = 97/144 (67%), Positives = 118/144 (82%), Gaps = 0/144 (0%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            +RLN L+PAEG+K+  +RLGRGIGSG+GKTGGRG KGQKSR  GGVR GFEGGQ  +YRR
Sbjct  1    MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTRAF  122
            LPKFGFTS+ A  TAE+RLS+L KVEG +V L TLKAAN++      A+V+L+GEVT   
Sbjct  61   LPKFGFTSRKAAITAEIRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPV  120

Query  123  TVQGVALTKGAQAAIEAAGGKVEE  146
            TV+G+ +TKGA+AAIEAAGGK+EE
Sbjct  121  TVRGLRVTKGARAAIEAAGGKIEE  144


>P46185 Large ribosomal subunit protein uL15 [Buchnera aphidicola 
subsp. Acyrthosiphon kondoi]
Length=144

 Score = 191 bits (485),  Expect = 3e-67
 Identities = 98/144 (68%), Positives = 117/144 (81%), Gaps = 0/144 (0%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            +RLN L+PAEGAK   +R+GRGIGSG+GKTGGRG KGQKSR  GGVR GFEGGQ  +YRR
Sbjct  1    MRLNTLSPAEGAKHAPKRVGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQIPLYRR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTRAF  122
            LPKFGFTS+ A+ TAEVRLSEL  VEG+++ L TLKAANVV       +V+LSGEV R  
Sbjct  61   LPKFGFTSRKAMITAEVRLSELALVEGDVIDLNTLKAANVVGIQIEFVKVILSGEVARPV  120

Query  123  TVQGVALTKGAQAAIEAAGGKVEE  146
            T++G+ +TKGA+AAIEAAGGK+EE
Sbjct  121  TLRGLRVTKGARAAIEAAGGKIEE  144


>Q5E895 Large ribosomal subunit protein uL15 [Aliivibrio fischeri 
(strain ATCC 700601 / ES114)]
Length=144

 Score = 186 bits (471),  Expect = 4e-65
 Identities = 94/144 (65%), Positives = 117/144 (81%), Gaps = 0/144 (0%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            +RLN L+PA G+K   +R+GRGIGSG+GKTGGRG KGQKSR  G VR GFEGGQ  + +R
Sbjct  1    MRLNTLSPAAGSKPSKKRVGRGIGSGLGKTGGRGHKGQKSRSGGKVRAGFEGGQMPLKQR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTRAF  122
            LPKFGFTS+ +L TAEVRLSEL KVEG ++ L +LKAANV+ ++   A+VVLSGE+  A 
Sbjct  61   LPKFGFTSRKSLVTAEVRLSELAKVEGNVIDLNSLKAANVITKNIEFAKVVLSGEIATAV  120

Query  123  TVQGVALTKGAQAAIEAAGGKVEE  146
            TV+G+ +TKGA+AAIEAAGGK+EE
Sbjct  121  TVKGLRVTKGAKAAIEAAGGKIEE  144


>P38373 Large ribosomal subunit protein uL15 [Halalkalibacterium 
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / 
JCM 9153 / C-125)]
Length=146

 Score = 129 bits (323),  Expect = 1e-42
 Identities = 70/144 (49%), Positives = 94/144 (65%), Gaps = 1/144 (1%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            ++L+EL PAEG+++   R+GRGIGSG GKT G+G KGQ +R  GGVRPGFEGGQ  +YRR
Sbjct  1    MKLHELKPAEGSRKVRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQNPLYRR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNKVE-GEIVSLETLKAANVVRRDQVRARVVLSGEVTRA  121
            LPK GFT+    + A V L +LN+ E G  VS E L    VV   +   +++ +G++ + 
Sbjct  61   LPKRGFTNPTRKEFAVVNLEKLNRFEDGTEVSPELLLETGVVSNAKDGIKILGNGKLEKK  120

Query  122  FTVQGVALTKGAQAAIEAAGGKVE  145
             TV+    +  A  AIEAAGGK E
Sbjct  121  LTVKANKFSASAVEAIEAAGGKTE  144


>P04452 Large ribosomal subunit protein uL15 [Geobacillus stearothermophilus]
Length=146

 Score = 123 bits (308),  Expect = 2e-40
 Identities = 67/144 (47%), Positives = 94/144 (65%), Gaps = 1/144 (1%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            ++L+EL PA G+++   R+GRGIGSG GKT GRG KGQ +R  GGVR GFEGGQT ++RR
Sbjct  1    MKLHELQPAPGSRKKAVRVGRGIGSGNGKTSGRGQKGQNARSGGGVRLGFEGGQTPLFRR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNKVE-GEIVSLETLKAANVVRRDQVRARVVLSGEVTRA  121
            LPK GFT+    + A V L +LN+ E G  V+ E L    V+ + +   +++  G++ + 
Sbjct  61   LPKRGFTNINRKEYAVVNLEKLNRFEDGTEVTPELLLETGVISKLKSGVKILGKGQIEKK  120

Query  122  FTVQGVALTKGAQAAIEAAGGKVE  145
             TV+    +  A+ AIEAAGGK E
Sbjct  121  LTVKAHKFSASAKEAIEAAGGKTE  144


>P35138 Large ribosomal subunit protein uL15 [Bacillus licheniformis 
(strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / 
NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 
46)]
Length=146

 Score = 122 bits (305),  Expect = 7e-40
 Identities = 65/144 (45%), Positives = 93/144 (65%), Gaps = 1/144 (1%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            ++L+EL PAEG+++   R+GRGIGSG GKT G+G KGQ +R  GGVRPGFEGGQ  +++R
Sbjct  1    MKLHELKPAEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNK-VEGEIVSLETLKAANVVRRDQVRARVVLSGEVTRA  121
            LPK GFT+    + A V L +LN   EG  V+ E L    V+ + +   +++  G++ + 
Sbjct  61   LPKRGFTNINRKEFAVVNLDKLNSFAEGTEVTPELLLETGVISKLKSGVKILGDGKLEKK  120

Query  122  FTVQGVALTKGAQAAIEAAGGKVE  145
             TV+    +  A+ AIEAAGG  E
Sbjct  121  LTVKANKFSASAKQAIEAAGGTAE  144


>P19946 Large ribosomal subunit protein uL15 [Bacillus subtilis 
(strain 168)]
Length=146

 Score = 120 bits (301),  Expect = 3e-39
 Identities = 63/144 (44%), Positives = 93/144 (65%), Gaps = 1/144 (1%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            ++L+EL P+EG+++   R+GRGIGSG GKT G+G KGQ +R  GGVRPGFEGGQ  +++R
Sbjct  1    MKLHELKPSEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNK-VEGEIVSLETLKAANVVRRDQVRARVVLSGEVTRA  121
            LPK GFT+    + A V L +LN   EG  V+ E L    V+ +     +++ +G++ + 
Sbjct  61   LPKRGFTNINRKEYAVVNLDKLNGFAEGTEVTPELLLETGVISKLNAGVKILGNGKLEKK  120

Query  122  FTVQGVALTKGAQAAIEAAGGKVE  145
             TV+    +  A+ A+EAAGG  E
Sbjct  121  LTVKANKFSASAKEAVEAAGGTAE  144


>P35139 Large ribosomal subunit protein uL15 [Staphylococcus carnosus 
(strain TM300)]
Length=146

 Score = 114 bits (286),  Expect = 5e-37
 Identities = 64/144 (44%), Positives = 90/144 (63%), Gaps = 1/144 (1%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            ++L+EL PAEG+++   R+GRG  +G GKT GRG KGQK+R  G VRPGFEGGQ  ++RR
Sbjct  1    MKLHELYPAEGSRKVRNRVGRGAATGNGKTSGRGQKGQKARSGGKVRPGFEGGQLPLFRR  60

Query  63   LPKFGFTSQIALKTAEVRLSELNKV-EGEIVSLETLKAANVVRRDQVRARVVLSGEVTRA  121
            LPK GFT+    + A V L +LN+  EG  V+ E L    VV+  +   +V+ +G + + 
Sbjct  61   LPKRGFTNINRKEFAVVNLEQLNRFEEGTEVTPELLIETGVVKNAKAGIKVLGNGSLEKK  120

Query  122  FTVQGVALTKGAQAAIEAAGGKVE  145
             TV+    +  A  AI+A GG  E
Sbjct  121  LTVKAHNFSASAAEAIDAKGGAHE  144


>P31160 Large ribosomal subunit protein uL15 [Synechococcus elongatus 
(strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=147

 Score = 100 bits (249),  Expect = 2e-31
 Identities = 59/144 (41%), Positives = 84/144 (58%), Gaps = 2/144 (1%)

Query  3    LRLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRR  62
            ++L+ LAP  GAK+  RR+GRGI +G G + G G++GQKSR     RPGFEGGQ  +YRR
Sbjct  1    MKLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRR  60

Query  63   LPKFGFTSQIALK-TAEVRLSEL-NKVEGEIVSLETLKAANVVRRDQVRARVVLSGEVTR  120
            +PK      I  K    V +  L     G  V+LE+L A  +V ++    +++  GE++ 
Sbjct  61   VPKLKHFPLINRKFYTVVNVGALAGLAAGTEVTLESLMAVGIVTQNDGPLKILGDGELSV  120

Query  121  AFTVQGVALTKGAQAAIEAAGGKV  144
            + +V   A T  AQ  IEAAGG +
Sbjct  121  SLSVSAAAFTATAQQKIEAAGGSI  144


>P31165 Large ribosomal subunit protein uL15c [Pisum sativum]
Length=258

 Score = 94.0 bits (232),  Expect = 9e-28
 Identities = 56/149 (38%), Positives = 85/149 (57%), Gaps = 11/149 (7%)

Query  4    RLNELAPAEGAKRDNRRLGRGIGSGVGKTGGRGVKGQKSRKSGGVRPGFEGGQTAIYRRL  63
            RL+ L P  G+++  +R GRGI +G G + G G++GQKSR   G+  GFEGGQ  +YRRL
Sbjct  67   RLDNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRL  126

Query  64   PKF----GFTSQIALKTAEVRLSELNKV---EGEIVSLETLKAANVV----RRDQVRARV  112
            PK     G       K   V L+++      +GE VSLETLKA  V+    R  ++  ++
Sbjct  127  PKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKI  186

Query  113  VLSGEVTRAFTVQGVALTKGAQAAIEAAG  141
            +  GE+++  T++  A +  A+  +E AG
Sbjct  187  LADGELSKKLTIKAGAFSTSAKEKLEYAG  215



Lambda      K        H        a         alpha
   0.318    0.136    0.371    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 310860


  Database: 153ef7602a32f9d6a70cf222dc205e33.SwissProt.fasta
    Posted date:  May 31, 2024  7:53 PM
  Number of letters in database: 3,751
  Number of sequences in database:  25



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40