BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 42689c594b16c8fd3e79a9b1bed38de1.SwissProt.fasta
26 sequences; 9,380 total letters
Query= ACIAD0003
Length=359
Score E
Sequences producing significant alignments: (Bits) Value
Q6FG19 DNA replication and repair protein RecF [Acinetobacter bay... 711 0.0
B0VAF5 DNA replication and repair protein RecF [Acinetobacter bau... 602 0.0
A3M0Q6 DNA replication and repair protein RecF [Acinetobacter bau... 602 0.0
B2HZA5 DNA replication and repair protein RecF [Acinetobacter bau... 602 0.0
B7IBH5 DNA replication and repair protein RecF [Acinetobacter bau... 602 0.0
B7GUX7 DNA replication and repair protein RecF [Acinetobacter bau... 602 0.0
B0VMK2 DNA replication and repair protein RecF [Acinetobacter bau... 597 0.0
B8CH73 DNA replication and repair protein RecF [Shewanella piezot... 242 9e-81
B1KCX5 DNA replication and repair protein RecF [Shewanella woodyi... 239 1e-79
Q83FD6 DNA replication and repair protein RecF [Coxiella burnetii... 239 2e-79
A9N902 DNA replication and repair protein RecF [Coxiella burnetii... 239 2e-79
B6J289 DNA replication and repair protein RecF [Coxiella burnetii... 238 4e-79
B0TLA6 DNA replication and repair protein RecF [Shewanella halifa... 238 5e-79
A9KEV0 DNA replication and repair protein RecF [Coxiella burnetii... 238 5e-79
B6J8S5 DNA replication and repair protein RecF [Coxiella burnetii... 238 5e-79
P24718 DNA replication and repair protein RecF [Actinobacillus pl... 205 3e-66
P13456 DNA replication and repair protein RecF [Pseudomonas putida] 204 7e-66
P22839 DNA replication and repair protein RecF [Proteus mirabilis] 200 3e-64
P24900 DNA replication and repair protein RecF [Salmonella typhim... 192 2e-61
B7UMG7 DNA replication and repair protein RecF [Escherichia coli ... 191 8e-61
P0A7H0 DNA replication and repair protein RecF [Escherichia coli ... 191 8e-61
Q5X9A5 DNA replication and repair protein RecF [Streptococcus pyo... 132 2e-38
Q8DMX3 DNA replication and repair protein RecF [Streptococcus pne... 120 4e-34
P36176 DNA replication and repair protein RecF [Streptomyces coel... 120 6e-34
Q8FA32 DNA replication and repair protein RecF [Leptospira interr... 119 1e-33
Q9CE70 DNA replication and repair protein RecF [Lactococcus lacti... 117 5e-33
>Q6FG19 DNA replication and repair protein RecF [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=358
Score = 711 bits (1836), Expect = 0.0
Identities = 358/358 (100%), Positives = 358/358 (100%), Gaps = 0/358 (0%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY
Sbjct 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
Query 61 IQQNAQDAIIFAQSLSEKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQSTDI 120
IQQNAQDAIIFAQSLSEKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQSTDI
Sbjct 61 IQQNAQDAIIFAQSLSEKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQSTDI 120
Query 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKMLS 180
IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKMLS
Sbjct 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKMLS 180
Query 181 EYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNKDV 240
EYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNKDV
Sbjct 181 EYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNKDV 240
Query 241 ERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHASNKETVVLLDD 300
ERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHASNKETVVLLDD
Sbjct 241 ERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHASNKETVVLLDD 300
Query 301 LTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQVHAV 358
LTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQVHAV
Sbjct 301 LTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQVHAV 358
>B0VAF5 DNA replication and repair protein RecF [Acinetobacter
baumannii (strain AYE)]
Length=360
Score = 602 bits (1553), Expect = 0.0
Identities = 298/355 (84%), Positives = 326/355 (92%), Gaps = 0/355 (0%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M +TRLNIERVRNLK VAL GLQPFN+FYGANGSGKTSILEA+HLLATGRSFRTH+PK+Y
Sbjct 1 MHLTRLNIERVRNLKTVALHGLQPFNVFYGANGSGKTSILEAIHLLATGRSFRTHIPKNY 60
Query 61 IQQNAQDAIIFAQSLSEKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQSTDI 120
IQ A DAI+FAQS +EKIGMQKL SGEQL+KVNGDTVATQGQLAKLLPLQH+DPQSTDI
Sbjct 61 IQYEADDAIVFAQSATEKIGMQKLASGEQLMKVNGDTVATQGQLAKLLPLQHIDPQSTDI 120
Query 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKMLS 180
IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRN LLKT+R LSLA+LEPWNKMLS
Sbjct 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNTLLKTRRNLSLADLEPWNKMLS 180
Query 181 EYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNKDV 240
+YGE+LHSQRL VE+W +FQ DL+QLLPDL+IELEYSPGFH+E GL QDLLN H KD+
Sbjct 181 DYGEILHSQRLSIVEQWNVYFQNDLSQLLPDLEIELEYSPGFHTEQGLMQDLLNQHQKDI 240
Query 241 ERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHASNKETVVLLDD 300
ERRYTEYGPHRADLRLKT G ADDVLSRGQKKLL++ALKLSQIAMLHASNKETVVLLDD
Sbjct 241 ERRYTEYGPHRADLRLKTPFGHADDVLSRGQKKLLIIALKLSQIAMLHASNKETVVLLDD 300
Query 301 LTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
LTAELD AQ+RLIERLSQLGSQVF+TTLDH +V +HL LSISYQL++V+ GQV
Sbjct 301 LTAELDLTAQQRLIERLSQLGSQVFMTTLDHASVKKHLHDLSISYQLFSVESGQV 355
>A3M0Q6 DNA replication and repair protein RecF [Acinetobacter
baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC
KC755 / 5377)]
Length=360
Score = 602 bits (1553), Expect = 0.0
Identities = 298/355 (84%), Positives = 326/355 (92%), Gaps = 0/355 (0%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M +TRLNIERVRNLK VAL GLQPFN+FYGANGSGKTSILEA+HLLATGRSFRTH+PK+Y
Sbjct 1 MHLTRLNIERVRNLKTVALHGLQPFNVFYGANGSGKTSILEAIHLLATGRSFRTHIPKNY 60
Query 61 IQQNAQDAIIFAQSLSEKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQSTDI 120
IQ A DAI+FAQS +EKIGMQKL SGEQL+KVNGDTVATQGQLAKLLPLQH+DPQSTDI
Sbjct 61 IQYEADDAIVFAQSATEKIGMQKLASGEQLMKVNGDTVATQGQLAKLLPLQHIDPQSTDI 120
Query 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKMLS 180
IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRN LLKT+R LSLA+LEPWNKMLS
Sbjct 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNTLLKTRRNLSLADLEPWNKMLS 180
Query 181 EYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNKDV 240
+YGE+LHSQRL VE+W +FQ DL+QLLPDL+IELEYSPGFH+E GL QDLLN H KD+
Sbjct 181 DYGEILHSQRLSIVEQWNVYFQNDLSQLLPDLEIELEYSPGFHTEQGLMQDLLNQHQKDI 240
Query 241 ERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHASNKETVVLLDD 300
ERRYTEYGPHRADLRLKT G ADDVLSRGQKKLL++ALKLSQIAMLHASNKETVVLLDD
Sbjct 241 ERRYTEYGPHRADLRLKTPFGHADDVLSRGQKKLLIIALKLSQIAMLHASNKETVVLLDD 300
Query 301 LTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
LTAELD AQ+RLIERLSQLGSQVF+TTLDH +V +HL LSISYQL++V+ GQV
Sbjct 301 LTAELDLTAQQRLIERLSQLGSQVFMTTLDHASVKKHLHDLSISYQLFSVESGQV 355
>B2HZA5 DNA replication and repair protein RecF [Acinetobacter
baumannii (strain ACICU)]
Length=360
Score = 602 bits (1553), Expect = 0.0
Identities = 298/355 (84%), Positives = 326/355 (92%), Gaps = 0/355 (0%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M +TRLNIERVRNLK VAL GLQPFN+FYGANGSGKTSILEA+HLLATGRSFRTH+PK+Y
Sbjct 1 MHLTRLNIERVRNLKTVALHGLQPFNVFYGANGSGKTSILEAIHLLATGRSFRTHIPKNY 60
Query 61 IQQNAQDAIIFAQSLSEKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQSTDI 120
IQ A DAI+FAQS +EKIGMQKL SGEQL+KVNGDTVATQGQLAKLLPLQH+DPQSTDI
Sbjct 61 IQYEADDAIVFAQSATEKIGMQKLASGEQLMKVNGDTVATQGQLAKLLPLQHIDPQSTDI 120
Query 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKMLS 180
IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRN LLKT+R LSLA+LEPWNKMLS
Sbjct 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNTLLKTRRNLSLADLEPWNKMLS 180
Query 181 EYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNKDV 240
+YGE+LHSQRL VE+W +FQ DL+QLLPDL+IELEYSPGFH+E GL QDLLN H KD+
Sbjct 181 DYGEILHSQRLSIVEQWNVYFQNDLSQLLPDLEIELEYSPGFHTEQGLMQDLLNQHQKDI 240
Query 241 ERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHASNKETVVLLDD 300
ERRYTEYGPHRADLRLKT G ADDVLSRGQKKLL++ALKLSQIAMLHASNKETVVLLDD
Sbjct 241 ERRYTEYGPHRADLRLKTPFGHADDVLSRGQKKLLIIALKLSQIAMLHASNKETVVLLDD 300
Query 301 LTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
LTAELD AQ+RLIERLSQLGSQVF+TTLDH +V +HL LSISYQL++V+ GQV
Sbjct 301 LTAELDLTAQQRLIERLSQLGSQVFMTTLDHASVKKHLHDLSISYQLFSVESGQV 355
>B7IBH5 DNA replication and repair protein RecF [Acinetobacter
baumannii (strain AB0057)]
Length=360
Score = 602 bits (1553), Expect = 0.0
Identities = 298/355 (84%), Positives = 326/355 (92%), Gaps = 0/355 (0%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M +TRLNIERVRNLK VAL GLQPFN+FYGANGSGKTSILEA+HLLATGRSFRTH+PK+Y
Sbjct 1 MHLTRLNIERVRNLKTVALHGLQPFNVFYGANGSGKTSILEAIHLLATGRSFRTHIPKNY 60
Query 61 IQQNAQDAIIFAQSLSEKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQSTDI 120
IQ A DAI+FAQS +EKIGMQKL SGEQL+KVNGDTVATQGQLAKLLPLQH+DPQSTDI
Sbjct 61 IQYEADDAIVFAQSATEKIGMQKLASGEQLMKVNGDTVATQGQLAKLLPLQHIDPQSTDI 120
Query 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKMLS 180
IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRN LLKT+R LSLA+LEPWNKMLS
Sbjct 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNTLLKTRRNLSLADLEPWNKMLS 180
Query 181 EYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNKDV 240
+YGE+LHSQRL VE+W +FQ DL+QLLPDL+IELEYSPGFH+E GL QDLLN H KD+
Sbjct 181 DYGEILHSQRLSIVEQWNVYFQNDLSQLLPDLEIELEYSPGFHTEQGLMQDLLNQHQKDI 240
Query 241 ERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHASNKETVVLLDD 300
ERRYTEYGPHRADLRLKT G ADDVLSRGQKKLL++ALKLSQIAMLHASNKETVVLLDD
Sbjct 241 ERRYTEYGPHRADLRLKTPFGHADDVLSRGQKKLLIIALKLSQIAMLHASNKETVVLLDD 300
Query 301 LTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
LTAELD AQ+RLIERLSQLGSQVF+TTLDH +V +HL LSISYQL++V+ GQV
Sbjct 301 LTAELDLTAQQRLIERLSQLGSQVFMTTLDHASVKKHLHDLSISYQLFSVESGQV 355
>B7GUX7 DNA replication and repair protein RecF [Acinetobacter
baumannii (strain AB307-0294)]
Length=360
Score = 602 bits (1553), Expect = 0.0
Identities = 298/355 (84%), Positives = 326/355 (92%), Gaps = 0/355 (0%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M +TRLNIERVRNLK VAL GLQPFN+FYGANGSGKTSILEA+HLLATGRSFRTH+PK+Y
Sbjct 1 MHLTRLNIERVRNLKTVALHGLQPFNVFYGANGSGKTSILEAIHLLATGRSFRTHIPKNY 60
Query 61 IQQNAQDAIIFAQSLSEKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQSTDI 120
IQ A DAI+FAQS +EKIGMQKL SGEQL+KVNGDTVATQGQLAKLLPLQH+DPQSTDI
Sbjct 61 IQYEADDAIVFAQSATEKIGMQKLASGEQLMKVNGDTVATQGQLAKLLPLQHIDPQSTDI 120
Query 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKMLS 180
IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRN LLKT+R LSLA+LEPWNKMLS
Sbjct 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNTLLKTRRNLSLADLEPWNKMLS 180
Query 181 EYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNKDV 240
+YGE+LHSQRL VE+W +FQ DL+QLLPDL+IELEYSPGFH+E GL QDLLN H KD+
Sbjct 181 DYGEILHSQRLSIVEQWNVYFQNDLSQLLPDLEIELEYSPGFHTEQGLMQDLLNQHQKDI 240
Query 241 ERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHASNKETVVLLDD 300
ERRYTEYGPHRADLRLKT G ADDVLSRGQKKLL++ALKLSQIAMLHASNKETVVLLDD
Sbjct 241 ERRYTEYGPHRADLRLKTPFGHADDVLSRGQKKLLIIALKLSQIAMLHASNKETVVLLDD 300
Query 301 LTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
LTAELD AQ+RLIERLSQLGSQVF+TTLDH +V +HL LSISYQL++V+ GQV
Sbjct 301 LTAELDLTAQQRLIERLSQLGSQVFMTTLDHASVKKHLHDLSISYQLFSVESGQV 355
>B0VMK2 DNA replication and repair protein RecF [Acinetobacter
baumannii (strain SDF)]
Length=360
Score = 597 bits (1539), Expect = 0.0
Identities = 296/355 (83%), Positives = 324/355 (91%), Gaps = 0/355 (0%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M +TRLNIERVRNLK VAL GLQPFN+FYGANGSGKTSILEA+HLLATGRSFRTH+PK+Y
Sbjct 1 MHLTRLNIERVRNLKTVALHGLQPFNVFYGANGSGKTSILEAIHLLATGRSFRTHIPKNY 60
Query 61 IQQNAQDAIIFAQSLSEKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQSTDI 120
IQ A DAI+FAQS +EKIGMQKL SGEQL+KVNGDTVATQGQLAKLLPLQH+DPQST+I
Sbjct 61 IQYEADDAIVFAQSATEKIGMQKLASGEQLMKVNGDTVATQGQLAKLLPLQHIDPQSTEI 120
Query 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKMLS 180
IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRN LLKT+R LSLA+LEPWNKMLS
Sbjct 121 IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNTLLKTRRNLSLADLEPWNKMLS 180
Query 181 EYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNKDV 240
YGE+LHSQRL VE+W +FQ DL+QLLPDL+IELEYSPGFH+E GL QDLLN H KD+
Sbjct 181 NYGEILHSQRLSIVEQWNVYFQNDLSQLLPDLEIELEYSPGFHTEQGLMQDLLNQHQKDI 240
Query 241 ERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHASNKETVVLLDD 300
ERRYTEYGPHRADLRLKT G ADDVLSRGQKKLL++ALKLSQIAMLHASNKETVVLLDD
Sbjct 241 ERRYTEYGPHRADLRLKTLFGHADDVLSRGQKKLLIIALKLSQIAMLHASNKETVVLLDD 300
Query 301 LTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
LTAELD AQ+RLIERLSQLGSQVF+TTLD +V +HL LSISYQL++V+ GQV
Sbjct 301 LTAELDLTAQQRLIERLSQLGSQVFMTTLDRASVKKHLHDLSISYQLFSVESGQV 355
>B8CH73 DNA replication and repair protein RecF [Shewanella piezotolerans
(strain WP3 / JCM 13877)]
Length=360
Score = 242 bits (618), Expect = 9e-81
Identities = 132/363 (36%), Positives = 215/363 (59%), Gaps = 9/363 (2%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M + RL+IE RN+ + L N+ YG NGSGKTSILEA++ L GRSFR+H+ +
Sbjct 1 MSLNRLHIEAFRNITSAQLQPGDGLNVIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRV 60
Query 61 IQQNAQDAIIFAQSLS----EKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQ 116
I +A +FA S KIG+++ SGE +K+NGD V LA+ LP+Q + P+
Sbjct 61 INNDADALTLFANMQSAEDESKIGLRRFRSGEIEVKINGDKVKRLSTLAETLPIQVITPE 120
Query 117 STDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWN 176
S ++ G K RRQ +DW FH +P FY AW R LKQRN LL+ + S ++ W+
Sbjct 121 SFSLLFEGPKSRRQFIDWGAFHSDPRFYAAWVNVRRILKQRNQLLRDESPYS--SIQFWD 178
Query 177 KMLSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYH 236
K Y E++ R V+ + + + + LP + +++ ++ G+ S+ Q L +
Sbjct 179 KEFIRYAELVTEIRKQYVDSLNELLKGIIEEFLPQVDVKVSFTRGWDSKTEYAQLLETQY 238
Query 237 NKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHAS-NKETV 295
+D+ +T GPH+ADLRL+ A D LSRGQ KLL+ AL+++Q +L +K+++
Sbjct 239 PRDLATGFTVSGPHKADLRLRVGTLPAQDALSRGQLKLLVCALRIAQGKLLKQQIDKKSI 298
Query 296 VLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
L+DDL +ELD+ ++ L+++L+ G+QVF+T ++ A+ L ++ ++++V+HG+V
Sbjct 299 YLVDDLPSELDAQHRKLLLQQLADTGAQVFVTAIEPAAIVDSL--ITPPSKMFHVEHGRV 356
Query 356 HAV 358
+
Sbjct 357 TVI 359
>B1KCX5 DNA replication and repair protein RecF [Shewanella woodyi
(strain ATCC 51908 / MS32)]
Length=365
Score = 239 bits (611), Expect = 1e-79
Identities = 133/363 (37%), Positives = 215/363 (59%), Gaps = 9/363 (2%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M +TRL+IE RN+ + L N+ YG NGSGKTS+LEA++ L GRSFR+H+ +
Sbjct 1 MSLTRLHIETFRNISSAQLHPSDGLNLIYGQNGSGKTSVLEAIYFLGMGRSFRSHLSQRV 60
Query 61 IQQNAQDAIIFAQ-SLSE---KIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQ 116
IQ +FA SL E KIG+++ SGE +K+NGD + LA+ LP+Q + P+
Sbjct 61 IQHQDDKLTLFANLSLGEQESKIGLRRFRSGETEVKINGDKIKRLSTLAETLPIQVITPE 120
Query 117 STDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWN 176
S ++ G K RRQ +DW FH + F+ AW R LKQRN LL K Q+S ++++ W+
Sbjct 121 SFSLLFEGPKSRRQFIDWGAFHSDKSFHSAWANVKRILKQRNQLL--KNQVSYSQIQFWD 178
Query 177 KMLSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYH 236
K L Y E++ R V+ + + + + LP +++++ ++ G+ S+ Q L +
Sbjct 179 KELVRYSELVTLIRKEYVDSLNEQLKGIIVEFLPQVEVKVSFTRGWDSKTDFGQLLETQY 238
Query 237 NKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAML-HASNKETV 295
+DV T GPH+ADLRL+ D LSRGQ KLL+ AL+++Q +L ++K ++
Sbjct 239 LRDVAAGNTGSGPHKADLRLRVGTLPVQDALSRGQLKLLVCALRIAQGKLLKQQTDKNSI 298
Query 296 VLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
L+DDL +ELD+ ++ L+++L G+Q+F+T +D A+ L + ++++V+ G V
Sbjct 299 YLVDDLPSELDAKHRQLLLQQLMDTGAQIFVTAIDPAAIVDSL--TTPPSKMFHVEQGCV 356
Query 356 HAV 358
+
Sbjct 357 TVI 359
>Q83FD6 DNA replication and repair protein RecF [Coxiella burnetii
(strain RSA 493 / Nine Mile phase I)]
Length=357
Score = 239 bits (609), Expect = 2e-79
Identities = 145/363 (40%), Positives = 209/363 (58%), Gaps = 16/363 (4%)
Query 3 ITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHYIQ 62
I L + + RNL V ++ FN F+G NG+GKTSILE+++ L+ GRSFRTH+P+ IQ
Sbjct 4 IGSLKVNQFRNLADVDITPHSQFNFFFGQNGAGKTSILESIYYLSVGRSFRTHLPQRLIQ 63
Query 63 QNAQDAIIFAQSLSEK----IGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQST 118
N +IF + +G+++ G++ +++NG+T ++ AK LPL L S
Sbjct 64 DNTDRFLIFITLYNGTQFIPLGVERDCHGDRCLRINGETASSWSLAAKRLPLCSLSAMSH 123
Query 119 DIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKM 178
+ G + RRQ LDWLMFHVEP F+ WQ R+LKQRN LK K L L E+ W+KM
Sbjct 124 RFLLDGPRVRRQFLDWLMFHVEPSFFSIWQRLQRSLKQRNAALKAK--LPLGEITHWDKM 181
Query 179 LSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNK 238
L E GE LH R V +K F Q L Q LP + Y G+ + L + L +
Sbjct 182 LVEDGERLHQLRQNVVTEFKPLFTQMLQQFLPAYPLIGHYFRGWSEKYSLMEQLQINLKQ 241
Query 239 DVERRYTEYGPHRADLRLKTALGD--ADDVLSRGQKKLLMMALKLSQ-IAMLHASNKETV 295
D++R YT+ GP RAD RL LGD A D+LS+GQ+KL+ AL +Q + + + +
Sbjct 242 DLQRGYTQAGPQRADFRL--TLGDLPAQDILSQGQQKLVTYALHFAQGLLLKEKTGISPI 299
Query 296 VLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
L+DDL AELD+N + +I+ ++ L SQVFI+ +D + L L++V HG+V
Sbjct 300 YLIDDLPAELDANKRDCVIDLVNCLESQVFISGIDPNEIR-----LPPHSTLFHVKHGKV 354
Query 356 HAV 358
A+
Sbjct 355 AAL 357
>A9N902 DNA replication and repair protein RecF [Coxiella burnetii
(strain RSA 331 / Henzerling II)]
Length=357
Score = 239 bits (609), Expect = 2e-79
Identities = 145/363 (40%), Positives = 209/363 (58%), Gaps = 16/363 (4%)
Query 3 ITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHYIQ 62
I L + + RNL V ++ FN F+G NG+GKTSILE+++ L+ GRSFRTH+P+ IQ
Sbjct 4 IGSLKVNQFRNLADVDITPHSQFNFFFGQNGAGKTSILESIYYLSVGRSFRTHLPQRLIQ 63
Query 63 QNAQDAIIFAQSLSEK----IGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQST 118
N +IF + +G+++ G++ +++NG+T ++ AK LPL L S
Sbjct 64 DNTDRFLIFITLYNGTQFIPLGVERDCHGDRCLRINGETASSWSLAAKRLPLCSLSAMSH 123
Query 119 DIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKM 178
+ G + RRQ LDWLMFHVEP F+ WQ R+LKQRN LK K L L E+ W+KM
Sbjct 124 RFLLDGPRVRRQFLDWLMFHVEPSFFSIWQRLQRSLKQRNAALKAK--LPLGEITHWDKM 181
Query 179 LSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNK 238
L E GE LH R V +K F Q L Q LP + Y G+ + L + L +
Sbjct 182 LVEDGERLHQLRQNVVTEFKPLFTQMLQQFLPAYPLIGHYFRGWSEKYSLMEQLQINLKQ 241
Query 239 DVERRYTEYGPHRADLRLKTALGD--ADDVLSRGQKKLLMMALKLSQ-IAMLHASNKETV 295
D++R YT+ GP RAD RL LGD A D+LS+GQ+KL+ AL +Q + + + +
Sbjct 242 DLQRGYTQAGPQRADFRL--TLGDLPAQDILSQGQQKLVTYALHFAQGLLLKEKTGISPI 299
Query 296 VLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
L+DDL AELD+N + +I+ ++ L SQVFI+ +D + L L++V HG+V
Sbjct 300 YLIDDLPAELDANKRDCVIDLVNCLESQVFISGIDPNEIR-----LPPHSTLFHVKHGKV 354
Query 356 HAV 358
A+
Sbjct 355 AAL 357
>B6J289 DNA replication and repair protein RecF [Coxiella burnetii
(strain CbuG_Q212)]
Length=357
Score = 238 bits (607), Expect = 4e-79
Identities = 142/361 (39%), Positives = 206/361 (57%), Gaps = 12/361 (3%)
Query 3 ITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHYIQ 62
I L + + RNL V ++ FN F+G NG+GKTSILE+++ L+ GRSFRTH+P+ IQ
Sbjct 4 IGSLKVNQFRNLADVDITPHSQFNFFFGQNGAGKTSILESIYYLSVGRSFRTHLPQRLIQ 63
Query 63 QNAQDAIIFAQSLSEK----IGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQST 118
N +IF + +G+++ G++ +++NG+T ++ AK LPL L S
Sbjct 64 DNTDRFLIFITLYNGTQFIPLGVERDCHGDRCLRINGETASSWSLAAKRLPLCSLSAMSH 123
Query 119 DIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKM 178
+ G + RRQ LDWLMFHVEP F+ WQ R+LKQRN LK K L L E+ W+KM
Sbjct 124 RFLLDGPRVRRQFLDWLMFHVEPSFFSIWQRLQRSLKQRNAALKAK--LPLGEITHWDKM 181
Query 179 LSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNK 238
L E GE LH R V +K F Q L Q LP + Y G+ + L + L +
Sbjct 182 LVEDGERLHQLRQNVVTEFKPLFTQMLQQFLPAYPLIGHYFRGWSEKYSLMEQLQINLKQ 241
Query 239 DVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQ-IAMLHASNKETVVL 297
D++R YT+ GP RAD RL A D+LS+GQ+KL+ AL +Q + + + + L
Sbjct 242 DLQRGYTQAGPQRADFRLTLRDLPAQDILSQGQQKLVTYALHFAQGLLLKEKTGISPIYL 301
Query 298 LDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQVHA 357
+DDL AELD+N + +I+ ++ L SQVFI+ +D + L L++V HG+V A
Sbjct 302 IDDLPAELDANKRDCVIDLVNCLESQVFISGIDPNEIR-----LPPHSTLFHVKHGKVAA 356
Query 358 V 358
+
Sbjct 357 L 357
>B0TLA6 DNA replication and repair protein RecF [Shewanella halifaxensis
(strain HAW-EB4)]
Length=365
Score = 238 bits (607), Expect = 5e-79
Identities = 131/363 (36%), Positives = 212/363 (58%), Gaps = 9/363 (2%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M +TRL+IE RN+ L N+ YG NGSGKTSILEA++ L GRSFR+H+ +
Sbjct 1 MSLTRLHIETFRNISLAQLDPGDGLNLIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRV 60
Query 61 IQQNAQDAIIFAQ----SLSEKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQ 116
IQ N +FA KIG+++ +GE +K+NGD + LA+ LP+Q + P+
Sbjct 61 IQHNDDKLTLFANLSVCEQESKIGLRRFRNGETEVKINGDNIKRLSTLAETLPIQVITPE 120
Query 117 STDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWN 176
S ++ G K RRQ +DW FH + F+ AW R LKQRN LL K Q+S ++++ W+
Sbjct 121 SFSLLFEGPKSRRQFIDWGAFHSDKSFHLAWANVRRILKQRNQLL--KNQVSYSQIQYWD 178
Query 177 KMLSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYH 236
K L Y E + R V+ + + + + LP +++++ ++ G+ S+ Q L +
Sbjct 179 KELVRYSEQVTEIRKQYVDSLNEQLKGIIGEFLPLVEVKVSFTRGWDSKTDFGQLLETQY 238
Query 237 NKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAML-HASNKETV 295
+DV T GPH+ADLRL+ + D LSRGQ KLL+ AL+++Q +L ++K ++
Sbjct 239 LRDVAAGNTGSGPHKADLRLRVGVLPVQDALSRGQLKLLVCALRIAQGKLLKQQTDKNSI 298
Query 296 VLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
L+DDL +ELD+ ++ L+++L G+QVF+T ++ A+ L + ++++V+ G V
Sbjct 299 YLVDDLPSELDAQHRKLLLQQLMDTGAQVFVTAIEPAAIVDSL--ATPPSKMFHVEQGCV 356
Query 356 HAV 358
+
Sbjct 357 TVI 359
>A9KEV0 DNA replication and repair protein RecF [Coxiella burnetii
(strain Dugway 5J108-111)]
Length=357
Score = 238 bits (606), Expect = 5e-79
Identities = 141/361 (39%), Positives = 206/361 (57%), Gaps = 12/361 (3%)
Query 3 ITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHYIQ 62
I L + + RNL V ++ FN F+G NG+GKTSILE+++ L+ GRSFRTH+P+ IQ
Sbjct 4 IGSLKVNQFRNLADVDITPHSQFNFFFGQNGAGKTSILESIYYLSVGRSFRTHLPQRLIQ 63
Query 63 QNAQDAIIFAQSLSEK----IGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQST 118
N +IF + +G+++ G++ +++NG+T ++ AK LPL L S
Sbjct 64 DNTDRFLIFITLYNGTQFIPLGVERDCHGDRCLRINGETASSWSLAAKRLPLCSLSAMSH 123
Query 119 DIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKM 178
+ G + RRQ LDWLMFHVEP F+ WQ R+LKQRN LK K L L E+ W+KM
Sbjct 124 RFLLDGPRVRRQFLDWLMFHVEPSFFSIWQRLQRSLKQRNAALKAK--LPLGEITHWDKM 181
Query 179 LSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNK 238
L E GE LH R V ++ F Q L Q LP + Y G+ + L + L +
Sbjct 182 LVEDGERLHQLRQNVVTEFRPLFTQMLQQFLPAYPLIGHYFRGWSEKYSLMEQLQINLKQ 241
Query 239 DVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQ-IAMLHASNKETVVL 297
D++R YT+ GP RAD RL A D+LS+GQ+KL+ AL +Q + + + + L
Sbjct 242 DLQRGYTQAGPQRADFRLTLRDLPAQDILSQGQQKLVTYALHFAQGLLLKEKTGISPIYL 301
Query 298 LDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQVHA 357
+DDL AELD+N + +I+ ++ L SQVFI+ +D + L L++V HG+V A
Sbjct 302 IDDLPAELDANKRDCVIDLVNYLESQVFISGIDPNEIR-----LPPHSTLFHVKHGKVAA 356
Query 358 V 358
+
Sbjct 357 L 357
>B6J8S5 DNA replication and repair protein RecF [Coxiella burnetii
(strain CbuK_Q154)]
Length=357
Score = 238 bits (606), Expect = 5e-79
Identities = 142/361 (39%), Positives = 206/361 (57%), Gaps = 12/361 (3%)
Query 3 ITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHYIQ 62
I L + + RNL V ++ FN F+G NG+GKTSILE+++ L+ GRSFRTH+P+ IQ
Sbjct 4 IGSLKVNQFRNLADVDITPHSQFNFFFGQNGAGKTSILESIYYLSVGRSFRTHLPQRLIQ 63
Query 63 QNAQDAIIFAQSLSEK----IGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQST 118
N +IF + +G+++ G++ +++NG+T ++ AK LPL L S
Sbjct 64 DNTDRFLIFITLYNGTQFIPLGVERDCQGDRCLRINGETASSWSLAAKRLPLCSLSAMSH 123
Query 119 DIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNKM 178
+ G + RRQ LDWLMFHVEP F+ WQ R+LKQRN LK K L L E+ W+KM
Sbjct 124 RFLLDGPRVRRQFLDWLMFHVEPSFFSIWQRLQRSLKQRNASLKAK--LPLGEITHWDKM 181
Query 179 LSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYHNK 238
L E GE LH R V +K F Q L Q LP + Y G+ + L + L +
Sbjct 182 LVEDGERLHQLRQNIVTEFKPLFTQMLQQFLPAYPLIGHYFRGWSEKYSLMEQLQINLKQ 241
Query 239 DVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQ-IAMLHASNKETVVL 297
D++R YT+ GP RAD RL A D+LS+GQ+KL+ AL +Q + + + + L
Sbjct 242 DLQRGYTQAGPQRADFRLTLRDLPAQDILSQGQQKLVTYALHFAQGLLLKEKTGISPIYL 301
Query 298 LDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQVHA 357
+DDL AELD+N + +I+ ++ L SQVFI+ +D + L L++V HG+V A
Sbjct 302 IDDLPAELDANKRDCVIDLVNCLESQVFISGIDPNEIR-----LPPHSTLFHVKHGKVAA 356
Query 358 V 358
+
Sbjct 357 L 357
>P24718 DNA replication and repair protein RecF [Actinobacillus
pleuropneumoniae]
Length=360
Score = 205 bits (521), Expect = 3e-66
Identities = 129/361 (36%), Positives = 190/361 (53%), Gaps = 9/361 (2%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M ++RL I RNL+++ L FN G NGSGKTS+LEA+ L GRSF++H+
Sbjct 1 MPLSRLIINNFRNLQSLDLELSPNFNFIVGHNGSGKTSLLEAIFYLGHGRSFKSHISNRI 60
Query 61 IQQNAQDAIIFAQSLSE-----KIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDP 115
I A+D ++ A+ + E +G+QK SG+ L+K+NG+ LA LLP+Q + P
Sbjct 61 IHYQAEDFVLHAR-IDEGQHQWSVGIQKKRSGDTLLKINGEDGNKISDLAHLLPMQVITP 119
Query 116 QSTDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPW 175
+ +++ G RR LDW +FH EFY W R LKQRN L R S AEL+PW
Sbjct 120 EGLTLLNGGPTFRRAFLDWGLFHQYTEFYSCWANLKRLLKQRNAALHQVR--SYAELKPW 177
Query 176 NKMLSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNY 235
+ L++ E++ R E + ++ LP+L+I + + G+ + L
Sbjct 178 DIELAKLAEIVSQMRASYAEGLRPEIEKTCQFFLPELEIGVSFHQGWEKGTDYAEILAQG 237
Query 236 HNKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHA-SNKET 294
+D YT GP +AD R + +DVLSRGQ KLLM AL+L+Q L A ++
Sbjct 238 FERDKAMGYTMIGPQKADFRFRANGLPVEDVLSRGQLKLLMCALRLAQGEYLVAQKERQC 297
Query 295 VVLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQ 354
+ L+DD +ELD + L RL + GSQVF+T + + Q S L+ V G
Sbjct 298 LFLIDDFASELDPIKRELLAHRLRESGSQVFVTAITKDQLNQMQWQESEQDSLFQVQQGM 357
Query 355 V 355
+
Sbjct 358 L 358
>P13456 DNA replication and repair protein RecF [Pseudomonas putida]
Length=365
Score = 204 bits (519), Expect = 7e-66
Identities = 132/360 (37%), Positives = 196/360 (54%), Gaps = 8/360 (2%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M + R+ + VRNL V L NI YGANGSGKTS+LEAVHLL RSFR+
Sbjct 1 MSLRRIMVTAVRNLHPVTLLPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLNPV 60
Query 61 IQQNAQDAIIFAQ-SLSE----KIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDP 115
IQ +F + L+E +G+ + GE I+++G A Q QLA+LLPLQ ++P
Sbjct 61 IQYEQAACTVFGEVQLTEGGTSNLGVSRERQGEFTIRIDGQN-ARQAQLAELLPLQLINP 119
Query 116 QSTDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPW 175
S +++ K RRQ LDW +FHVEP F AWQ +AL+QRN L+ L A W
Sbjct 120 DSFRLLEGAPKIRRQFLDWGVFHVEPRFLPAWQRLQKALRQRNSWLR-HGTLDPASQAAW 178
Query 176 NKMLSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNY 235
++ L + R ++ K F++ L++L+ + L Y G+ + L + L +
Sbjct 179 DRELCLRSAEIDEYRRNYIKALKPVFERTLSELVELDGLTLSYYRGWDKDRELQEVLASS 238
Query 236 HNKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHASNKETV 295
+D + +T+ GP RADLRL+ A +A D+LSRGQ+KL+ M + + A +
Sbjct 239 LLRDQQMGHTQAGPQRADLRLRLAGNNAADILSRGQQKLVGMRIIAQGHLVSQARRGHCI 298
Query 296 VLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
L+DDL +ELD +R L L +L QVFIT +DH+ + + L++V+ G++
Sbjct 299 YLVDDLPSELDDQHRRALCRLLEELRCQVFITCVDHELLREGWQ-TETPVALFHVEQGRI 357
>P22839 DNA replication and repair protein RecF [Proteus mirabilis]
Length=362
Score = 200 bits (508), Expect = 3e-64
Identities = 124/363 (34%), Positives = 188/363 (52%), Gaps = 13/363 (4%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M ++RL I RN++ L FN G NGSGKTSILEA++ L GR+FR+
Sbjct 1 MILSRLLIRHFRNIEQADLPLADGFNFLVGPNGSGKTSILEAIYTLGHGRAFRSAQANRV 60
Query 61 IQQNAQDAIIFA-------QSLSEKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHL 113
IQ + I+ +S IG+ K G ++++G +LAKLLP+Q +
Sbjct 61 IQHDENAFILHGRLSGLDEESRGYSIGLSKDREGNSTVRIDGSDGHKIAELAKLLPMQLI 120
Query 114 DPQSTDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELE 173
P+ +++ G K RR +DW FH EP F+ AW R LKQRN L ++ S +L
Sbjct 121 TPEGFTLLNGGPKYRRAFIDWGCFHNEPRFFAAWSDLKRVLKQRNAAL--RQASSYRQLL 178
Query 174 PWNKMLSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLL 233
PW+K L E + R E ++ LP+ +++ + G+ E Q L
Sbjct 179 PWDKELILLTEQISQWRAEYTEDIAKDIEETCQLFLPEFTLKVSFQRGWDKETDYAQLLE 238
Query 234 NYHNKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHASN-K 292
+D YT G H+ADLR++ +D+LSRGQ KLLM AL+L+Q N +
Sbjct 239 RQFERDKVLSYTSLGAHKADLRIRANGTPVEDMLSRGQLKLLMCALRLAQGEYFTRKNGQ 298
Query 293 ETVVLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDH 352
+ LLDD +ELD+N ++ L ERL +QVF++ + V LD ++ +L++V+H
Sbjct 299 RCLYLLDDFASELDANRRQLLAERLKSTQAQVFVSAITSGQVKDMLD---VNSRLFSVEH 355
Query 353 GQV 355
G++
Sbjct 356 GKI 358
>P24900 DNA replication and repair protein RecF [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=357
Score = 192 bits (488), Expect = 2e-61
Identities = 125/365 (34%), Positives = 189/365 (52%), Gaps = 20/365 (5%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M +TRL I+ RN++ L+ FN GANGSGKTS+LEA++ L GR+FR+ P
Sbjct 1 MSLTRLLIKDFRNIENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGRV 60
Query 61 IQQNAQDAIIFAQSLSEK----IGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQ 116
I+ + ++ + SE+ IG+ K G+ ++++G +LA L+P+Q + P+
Sbjct 61 IRHEQEAFVLHGRLQSEERETSIGLTKDKQGDSKVRIDGTDGHKIAELAHLMPMQLITPE 120
Query 117 STDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAE-LEPW 175
+++ G K RR LDW FH E F+ AW R LKQRN L RQ+S E L PW
Sbjct 121 GFTLLNGGPKYRRAFLDWGCFHNEAGFFTAWSNLKRLLKQRNAAL---RQVSRYEQLRPW 177
Query 176 NKMLSEYGEMLHSQRLVTVERWKDFFQQDLA----QLLPDLQIELEYSPGFHSEVGLWQD 231
+K L E + + R + QD+A Q LP+ + + G+ E
Sbjct 178 DKELIPLAEQISTWR----AEYSSAIAQDMADTCQQFLPEFSLTFSFQRGWEKETDYADV 233
Query 232 LLNYHNKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAML-HAS 290
L +D YT +GPH+AD R++ +D LSRGQ KLLM AL+L+Q L S
Sbjct 234 LERSFERDRMLTYTAHGPHKADFRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRES 293
Query 291 NKETVVLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNV 350
+ + L+DD +ELD + L RL SQVF++ + + V D S +++ V
Sbjct 294 GRRCLYLIDDFASELDDARRGLLASRLKATQSQVFVSAISAEHVIDMSDENS---KMFTV 350
Query 351 DHGQV 355
+ G++
Sbjct 351 EKGKI 355
>B7UMG7 DNA replication and repair protein RecF [Escherichia coli
O127:H6 (strain E2348/69 / EPEC)]
Length=357
Score = 191 bits (484), Expect = 8e-61
Identities = 118/360 (33%), Positives = 183/360 (51%), Gaps = 10/360 (3%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M +TRL I RN++ L+ FN GANGSGKTS+LEA++ L GR+FR+
Sbjct 1 MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV 60
Query 61 IQQNAQDAIIFAQSLSEK----IGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQ 116
I+ + ++ + E+ IG+ K G+ ++++G +LA L+P+Q + P+
Sbjct 61 IRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPE 120
Query 117 STDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWN 176
+++ G K RR LDW FH EP F+ AW R LKQRN L+ + +L PW+
Sbjct 121 GFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYE--QLRPWD 178
Query 177 KMLSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYH 236
K L E + + R Q LP+ + + G+ E + L
Sbjct 179 KELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNF 238
Query 237 NKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAML-HASNKETV 295
+D + YT +GPH+ADLR++ +D LSRGQ KLLM AL+L+Q L S + +
Sbjct 239 ERDRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCL 298
Query 296 VLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
L+DD +ELD + L RL SQVF++ + + V D S +++ V+ G++
Sbjct 299 YLIDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENS---KMFTVEKGKI 355
>P0A7H0 DNA replication and repair protein RecF [Escherichia coli
(strain K12)]
Length=357
Score = 191 bits (484), Expect = 8e-61
Identities = 118/360 (33%), Positives = 183/360 (51%), Gaps = 10/360 (3%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M +TRL I RN++ L+ FN GANGSGKTS+LEA++ L GR+FR+
Sbjct 1 MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV 60
Query 61 IQQNAQDAIIFAQSLSEK----IGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQ 116
I+ + ++ + E+ IG+ K G+ ++++G +LA L+P+Q + P+
Sbjct 61 IRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPE 120
Query 117 STDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWN 176
+++ G K RR LDW FH EP F+ AW R LKQRN L+ + +L PW+
Sbjct 121 GFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYE--QLRPWD 178
Query 177 KMLSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLNYH 236
K L E + + R Q LP+ + + G+ E + L
Sbjct 179 KELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNF 238
Query 237 NKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAML-HASNKETV 295
+D + YT +GPH+ADLR++ +D LSRGQ KLLM AL+L+Q L S + +
Sbjct 239 ERDRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCL 298
Query 296 VLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDHGQV 355
L+DD +ELD + L RL SQVF++ + + V D S +++ V+ G++
Sbjct 299 YLIDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENS---KMFTVEKGKI 355
>Q5X9A5 DNA replication and repair protein RecF [Streptococcus
pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)]
Length=368
Score = 132 bits (332), Expect = 2e-38
Identities = 98/366 (27%), Positives = 176/366 (48%), Gaps = 16/366 (4%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M I L ++ RN + S N+F G N GKT+ LEA++ L+ RS RT K
Sbjct 1 MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKEL 60
Query 61 IQQNAQDAIIFA--QSLSEKIGMQKLLSGE-QLIKVNGDTVATQGQLAKLLPLQHLDPQS 117
I + + Q +S + ++ LS + ++ K+N A + + P+
Sbjct 61 IHFDHSTVSLTGKIQRISGTVDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPED 120
Query 118 TDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNK 177
++ RR+ +D + ++P + +Y+ LKQRN LK+ +Q+ A L ++
Sbjct 121 LQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQRNSYLKSAQQIDAAFLAVLDE 180
Query 178 MLSEYGEMLHSQR---LVTVERWKDFFQQDLAQLLPDLQIELEYSPGFHSEVGLWQDLLN 234
L+ YG + R + +E+ + Q ++ L L + + S F + ++Q L+
Sbjct 181 QLAGYGARVMEHRIDFINALEKEANTHHQAISNGLESLSLSYQSSVVFDKKTNIYQQFLH 240
Query 235 Y----HNKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHA- 289
H KD R+ T GPHR DL G + S+GQ + L+++LK+++++++ A
Sbjct 241 QLEKNHQKDFFRKNTSVGPHRDDLAFYIN-GMNANFASQGQHRSLILSLKMAEVSLMKAL 299
Query 290 SNKETVVLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYN 349
+ ++LLDD+ +ELD+ Q +L+E + + Q FITT HL L ++++
Sbjct 300 TGDNPILLLDDVMSELDNTRQTKLLETVIKENVQTFITTTS----LDHLSQLPEGIRIFH 355
Query 350 VDHGQV 355
V G V
Sbjct 356 VTKGTV 361
>Q8DMX3 DNA replication and repair protein RecF [Streptococcus
pneumoniae (strain ATCC BAA-255 / R6)]
Length=365
Score = 120 bits (301), Expect = 4e-34
Identities = 95/365 (26%), Positives = 178/365 (49%), Gaps = 17/365 (5%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M + L+++ RN K + N+F G N GKT++LEA++ LA RS RT K+
Sbjct 1 MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNL 60
Query 61 IQQNAQDAII--FAQSLSEKIGMQ-KLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQS 117
I + + + Q + I ++ +L ++ KVN A + + P+
Sbjct 61 IHFDEEQLHLSGLVQKKTGSIPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPED 120
Query 118 TDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEPWNK 177
+I RR+ +D + ++P + Y+ LKQRN LK+ +++ L +
Sbjct 121 LQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQRNTYLKSAQKIDETFLSVLDD 180
Query 178 MLSEYGEMLHSQRLVTVERWKDFFQQ---DLAQLLPDLQIELEYSPGFHSEVGLWQD--- 231
L +YG + + RL +++ + F ++ +L+ + +L I + S + L +
Sbjct 181 QLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI 240
Query 232 -LLNYHNKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHAS 290
L ++D+ ++ T GPHR D+ DA S+GQ + L++++KL++I ++ +
Sbjct 241 ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDA-SFGSQGQHRSLVLSIKLAEIELMESI 299
Query 291 NKET-VVLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYN 349
E+ ++LLDD+ +ELD+ Q +L+E +SQ Q FITT HL L + ++
Sbjct 300 TTESPILLLDDVMSELDNTRQLKLLETISQ-SIQTFITTTS----LDHLQNLPENLSIFT 354
Query 350 VDHGQ 354
+ G+
Sbjct 355 IQDGK 359
>P36176 DNA replication and repair protein RecF [Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145)]
Length=373
Score = 120 bits (300), Expect = 6e-34
Identities = 103/361 (29%), Positives = 157/361 (43%), Gaps = 22/361 (6%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M +T L++ R+ V + F G NG GKT+++EAV LAT S R
Sbjct 1 MHVTHLSLADFRSYARVEVPLDPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAPL 60
Query 61 IQQNAQDAIIFAQ----SLSEKIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLDPQ 116
++ A+ A+I AQ + I ++ +VN + + ++ P+
Sbjct 61 VRMGAERAVIRAQVRQGERQQLIELELNPGRANRARVNRSSQVKPRDVLGIVRTVLFAPE 120
Query 117 STDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTK--------RQLS 168
++ RR+ LD L+ P Y R LKQRN LLK+ R +
Sbjct 121 DLALVKGDPGERRRFLDELITARSPRMAGVRSDYDRVLKQRNTLLKSAALARRHGGRTMD 180
Query 169 LAELEPWNKMLSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDL-QIELEYSPGFHSEVG 227
L+ L+ W++ L+ G L +QRL + + + QL P + LEY P E
Sbjct 181 LSTLDVWDQHLARAGAELLAQRLDLIASVQPLADKAYEQLAPGGGPVALEYKPSAPGEAH 240
Query 228 LWQDLLNY--------HNKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMAL 279
+DL +++ER T GPHR DL LK A S G+ +AL
Sbjct 241 TREDLYEQLMAALAEARKQEIERGVTLVGPHRDDLLLKLGSLPAKGYASHGESWSYALAL 300
Query 280 KLSQIAMLHASNKETVVLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLD 339
+L+ +L A E V++LDD+ AELD+ + RL E ++ G QV +T V L
Sbjct 301 RLASFDLLRAEGNEPVLVLDDVFAELDARRRERLAELVAP-GEQVLVTAAVDDDVPHVLA 359
Query 340 G 340
G
Sbjct 360 G 360
>Q8FA32 DNA replication and repair protein RecF [Leptospira interrogans
serogroup Icterohaemorrhagiae serovar Lai (strain
56601)]
Length=365
Score = 119 bits (298), Expect = 1e-33
Identities = 95/366 (26%), Positives = 174/366 (48%), Gaps = 10/366 (3%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M + L I+ RN + ++L F G NG GKT++LEA+ +L+ +SFR +
Sbjct 1 MFLKHLTIQNFRNHEELSLDFDSRLIFFVGDNGEGKTNLLEAICILSWLKSFRESEDSNL 60
Query 61 IQQNAQDAII---FAQSLSE---KIGMQKLLSGEQLIKVNGDTVATQGQLAKLLPLQHLD 114
I+ +++ + +L E +IG S ++ +K N + + + L L
Sbjct 61 IRWGSENYFLRGKIKDNLKESVLEIGFTSKPSVKRKLKFNQEEIKKRTDLIGKFITVLLT 120
Query 115 PQSTDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLKTKRQLSLAELEP 174
P II+ G RR+ +D + +P + + Y++ LK RN LLK+ ++ L
Sbjct 121 PMDLKIIEGGPAERRKFIDAFISSFDPFYLESLLEYNKILKHRNALLKSGNP-DISHLSI 179
Query 175 WNKMLSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQ-IELEYSPGFHSEVGLWQDLL 233
W+K + E G + ++R V F++ +L +L +EL Y P + + L
Sbjct 180 WDKKIVEKGIFILNKRREVVLELNSFYRVNLDKLSGGKDGLELIYKPNVKDQDEFLEKLN 239
Query 234 NYHNKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAML-HASNK 292
+ ++D+ YT G HR DL + + D + S+GQK+ ++ALK + + N
Sbjct 240 HNLSRDLRLGYTSVGIHRDDLFIGSDQRDITEFGSQGQKRSTVIALKAATFNYYKNILNT 299
Query 293 ETVVLLDDLTAELDSNAQRRLIERLSQLGSQVFITTLDHQAVTQHLDGLSISYQLYNVDH 352
V+L+DD+ ELD + ++ + G Q F TT D + + ++ L Q++ +
Sbjct 300 IPVLLIDDVIRELDVKRREYFVDLVVTAG-QAFFTTTDLEGIQDYVGKLKDQKQIFLIRQ 358
Query 353 GQVHAV 358
G+V ++
Sbjct 359 GKVESI 364
>Q9CE70 DNA replication and repair protein RecF [Lactococcus lactis
subsp. lactis (strain IL1403)]
Length=358
Score = 117 bits (293), Expect = 5e-33
Identities = 95/362 (26%), Positives = 180/362 (50%), Gaps = 15/362 (4%)
Query 1 MQITRLNIERVRNLKAVALSGLQPFNIFYGANGSGKTSILEAVHLLATGRSFRTHMPKHY 60
M++ + ++ RN + + L NIF G N GKT+ILEA+H LA RS RT K
Sbjct 1 MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKEL 60
Query 61 IQQNAQDAII--FAQSLSEKIGMQKLLSGE-QLIKVNGDTVATQGQLAKLLPLQHLDPQS 117
I + Q+ + + + ++ LS + ++ K N L + P++
Sbjct 61 ISWSQQEMKVSGVVEKAHATVPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPEN 120
Query 118 TDIIDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNMLLK-TKRQLSLAELEPWN 176
+++ RR+ +D + + + + Y+RALK+RN LK K ++ L +
Sbjct 121 LELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKERNAYLKFDKDKIDKNFLSVLD 180
Query 177 KMLSEYGEMLHSQRLVTVERWKDFFQQDLAQLLPDLQ-IELEYSPGFHSEVGLWQDLLNY 235
L+E+G + +R +++ + ++ QL + +++ Y+ ++ ++LL+
Sbjct 181 GQLAEHGNKIMLERQNFIDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFS--KELLSR 238
Query 236 HNKDVERRYTEYGPHRADLRLKTALGDADDVLSRGQKKLLMMALKLSQIAMLHASNKE-T 294
+ D+ R T GPHR DL+ + D S+GQ++ + +++KL++I ++ E
Sbjct 239 QDHDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYP 298
Query 295 VVLLDDLTAELDSNAQRRLIERLSQLG-SQVFITTLDHQAVTQHLDGLSISYQLYNVDHG 353
++LLDD+ +ELD++ Q LIE + LG +Q FITT HL L + +++V+ G
Sbjct 299 ILLLDDVMSELDNHRQLDLIE--TSLGKTQTFITT----TTLDHLKNLPENLSIFHVNAG 352
Query 354 QV 355
+
Sbjct 353 TI 354
Lambda K H a alpha
0.322 0.136 0.394 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2464596
Database: 42689c594b16c8fd3e79a9b1bed38de1.SwissProt.fasta
Posted date: May 9, 2024 12:41 AM
Number of letters in database: 9,380
Number of sequences in database: 26
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
