BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: c79118f46df7cdaa42c82412a5edaf04.SwissProt.fasta
11 sequences; 3,889 total letters
Query= ACIAD0038
Length=341
Score E
Sequences producing significant alignments: (Bits) Value
P75853 Putative aliphatic sulfonates-binding protein [Escherichia... 221 2e-73
P40400 Putative aliphatic sulfonates-binding protein [Bacillus su... 176 6e-56
Q47537 Taurine-binding periplasmic protein [Escherichia coli (str... 82.8 2e-21
Q2YJB6 Putative binding protein BAB2_1146 [Brucella abortus (stra... 68.9 1e-16
Q8FUN4 Putative binding protein BRA1186/BS1330_II1177 [Brucella s... 68.9 1e-16
Q576E1 Putative binding protein BruAb2_1122 [Brucella abortus bio... 68.9 1e-16
Q8YDR6 Putative binding protein BMEII0109 [Brucella melitensis bi... 68.9 1e-16
P0A3T2 31 kDa immunogenic protein [Brucella melitensis biotype 1 ... 45.4 7e-09
P0A3T3 31 kDa immunogenic protein [Brucella abortus biovar 1 (str... 45.4 7e-09
P44658 Putative thiamine biosynthesis protein HI_0357 [Haemophilu... 39.7 5e-07
P73450 Nitrate import ATP-binding protein NrtC [Synechocystis sp.... 36.2 9e-06
>P75853 Putative aliphatic sulfonates-binding protein [Escherichia
coli (strain K12)]
Length=319
Score = 221 bits (562), Expect = 2e-73
Identities = 119/308 (39%), Positives = 184/308 (60%), Gaps = 4/308 (1%)
Query 29 SVVAASITGIMMLSGCAKKEAQDLTTLNIGFQKYGL-LPIVKERGELDKILKKEGITIKW 87
+++ ++ G++ +S A L IG+QK + + + K L+K + I+ W
Sbjct 3 NIIKLALAGLLSVSTFAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPESKIS--W 60
Query 88 VEFPAGPQLLEGLNVGSVVFGEAGEAPPIFAQAANSNLVYVANQPAAPNAEALIVQKNSS 147
VEFPAGPQ+LE LNVGS+ G G+ PPIFAQAA ++LVYV +P P AE ++V +NS
Sbjct 61 VEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSP 120
Query 148 VHSVQDLKGKRIALNKGSNVHYLLLKLLEKNHLTLNDIQVVYLPPADARAAFEKGAVDAW 207
+ +V DLKG ++A KGS+ H LLL+ L + L DIQ YL PADARAAF++G VDAW
Sbjct 121 IKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAW 180
Query 208 VIWDPFFAAAEQQIGARVIATGQDLVSNHQFYLADRKFAQNHPEVLKTLVKELNQSTEWV 267
IWDP+++AA Q G RV+ G DL FYLA R +A+ + ++ ++ +++
Sbjct 181 AIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALT 240
Query 268 KTHQDDAAKLLEKPTALDFNILKTSIS-RMGFGVTPLSNTVINEQQQVADAFYQQKLIPQ 326
++ ++ + LL K L ++ + + R + P++ V QQQ AD FY+ +L+P+
Sbjct 241 RSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPK 300
Query 327 PLKIQDAI 334
+ I+ I
Sbjct 301 KVDIRQRI 308
>P40400 Putative aliphatic sulfonates-binding protein [Bacillus
subtilis (strain 168)]
Length=332
Score = 176 bits (445), Expect = 6e-56
Identities = 100/304 (33%), Positives = 165/304 (54%), Gaps = 8/304 (3%)
Query 38 IMMLSGC----AKKEAQDLTTLNIGFQK-YGLLPIVKERGELDKILKKEGITIKWVEFPA 92
I +L+GC A + + L + IG Q+ L I KE+G + +KEGI +KWVEF +
Sbjct 12 IFLLAGCGANGASGDHKQLKEIRIGIQQSLSPLLIAKEKGWFEDAFEKEGIKVKWVEFQS 71
Query 93 GPQLLEGLNVGSVVFGEAGEAPPIFAQAANSNLVYVANQPAAPNAEALIVQKNSSVHSVQ 152
GP EGL + F + G +P I QAA + + A ++V +NS + V+
Sbjct 72 GPPQFEGLAADKLDFSQVGNSPVIAGQAAGIDFKEIGLSQDGLKANGILVNQNSGIQDVK 131
Query 153 DLKGKRIALNKGSNVHYLLLKLLEKNHLTLNDIQVVYLPPADARAAFEKGAVDAWVIWDP 212
LKGK+IA+ KGS+ L K L++ L+ ND+ ++ L P +A +AFE G+VDAW IW+P
Sbjct 132 GLKGKKIAVAKGSSGFDFLYKALDQVGLSANDVTIIQLQPDEAASAFENGSVDAWSIWEP 191
Query 213 FFAAAEQQIGARVIATGQ--DLVSNHQFYLADRKFAQNHPEVLKTLVKELNQSTEWVKTH 270
+ + + GA+++ G+ DL S F L KF++ HP+ + +K N++ W K H
Sbjct 192 YLSLETMKHGAKILVNGESTDLYS-PGFTLVRTKFSEEHPDEVVRFLKVFNKAVVWQKEH 250
Query 271 QDDAAKLLEKPTALDFNILKTSISRMGFGVTPLSNTVINEQQQVADAFYQQKLIPQPLKI 330
D+AA L LD +++ + +S+ ++ QQ+ AD ++ K I + + +
Sbjct 251 LDEAADLYSDIKDLDKKVVENVLKNTEPLNEIISDDIVKAQQETADFQFRTKAIDKKIDV 310
Query 331 QDAI 334
+D +
Sbjct 311 KDVV 314
>Q47537 Taurine-binding periplasmic protein [Escherichia coli
(strain K12)]
Length=320
Score = 82.8 bits (203), Expect = 2e-21
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 17/245 (7%)
Query 79 KKEGITIKWVEFPAGPQLLEGLNVGSVVFGEAGEAPPIFAQAANSNLVYVANQPAAPNAE 138
K+ G T+ W +F +G ++ L G V G G +P A + + N+E
Sbjct 47 KESGATVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKLGNSE 106
Query 139 ALIVQKNSSVHSVQDLKGKRIALNKGSNVHYLLLKLLEKNHLTLNDIQVVYLPPADARAA 198
AL+V+K ++ +DL GKRIA+ S HY LL L+ + +++V L P AA
Sbjct 107 ALVVKK--TISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAIIAA 164
Query 199 FEKGAVDAWVIWDPFFAAAEQQIGARVIA----TGQDLVSNHQFYLADRKFAQNHPEVLK 254
+++G +D +W P A E+ +V+ GQ ++ + FA+ HPEV+K
Sbjct 165 WQRGDIDGAYVWAPAVNALEKD--GKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVK 222
Query 255 TLVKELNQSTEWVKTHQDDAAKLLEKPTALDFNILKTSISRMGFGVTP---LSNTVINEQ 311
K + + + D K E + L +S + G P NT + Q
Sbjct 223 AFAKSAIDAQQPYIANPDVWLKQPENISKL------ARLSGVPEGDVPGLVKGNTYLTPQ 276
Query 312 QQVAD 316
QQ A+
Sbjct 277 QQTAE 281
>Q2YJB6 Putative binding protein BAB2_1146 [Brucella abortus (strain
2308)]
Length=319
Score = 68.9 bits (167), Expect = 1e-16
Identities = 53/229 (23%), Positives = 106/229 (46%), Gaps = 13/229 (6%)
Query 67 IVKERGELDKILKKEGITIKWVEFPAGPQLLEGLNVGSVVFGEAGEAPPIFAQAANSNLV 126
I E+G + +K G+ F GP ++ L GS+ FG G + + +V
Sbjct 43 IASEKG----LWEKHGLDADTRVFTNGPIQVQALGAGSLDFGYIGPGALWLPASGKAKIV 98
Query 127 YVANQPAAPNAEALIVQKNSSVHSVQDLKGKRIALNKGSNVHYLLLKLLEKNHLTLNDIQ 186
+ + ++ +I Q+ S+ DLKGK+I + +G++ LL L K + L+D+Q
Sbjct 99 AINS---VGFSDRVIAQEGFK--SMADLKGKKIGVPEGTSGDMLLRLALGKAGMKLDDVQ 153
Query 187 VVYLPPADARAAFEKGAVDAWVIWDPFFAAAEQQIGARV-IATGQDLVSNHQF---YLAD 242
V+ + P+ +AF +DA IW P ++ + V +A D + F ++A
Sbjct 154 VIKMDPSTVVSAFASKQIDAAGIWYPLIGTIKEHVPGMVELAANSDFFPDKTFPSAFIAR 213
Query 243 RKFAQNHPEVLKTLVKELNQSTEWVKTHQDDAAKLLEKPTALDFNILKT 291
+ +PE +K ++ + ++ ++ + + + + K +D L+T
Sbjct 214 NEIVAENPEAVKRMIAVIEEAEDFRTANPEQSVDITAKFLKVDKANLET 262
>Q8FUN4 Putative binding protein BRA1186/BS1330_II1177 [Brucella
suis biovar 1 (strain 1330)]
Length=319
Score = 68.9 bits (167), Expect = 1e-16
Identities = 53/229 (23%), Positives = 106/229 (46%), Gaps = 13/229 (6%)
Query 67 IVKERGELDKILKKEGITIKWVEFPAGPQLLEGLNVGSVVFGEAGEAPPIFAQAANSNLV 126
I E+G + +K G+ F GP ++ L GS+ FG G + + +V
Sbjct 43 IASEKG----LWEKHGLDADTRVFTNGPIQVQALGAGSLDFGYIGPGALWLPASGKAKIV 98
Query 127 YVANQPAAPNAEALIVQKNSSVHSVQDLKGKRIALNKGSNVHYLLLKLLEKNHLTLNDIQ 186
+ + ++ +I Q+ S+ DLKGK+I + +G++ LL L K + L+D+Q
Sbjct 99 AINS---VGFSDRVIAQEGFK--SMADLKGKKIGVPEGTSGDMLLRLALGKAGMKLDDVQ 153
Query 187 VVYLPPADARAAFEKGAVDAWVIWDPFFAAAEQQIGARV-IATGQDLVSNHQF---YLAD 242
V+ + P+ +AF +DA IW P ++ + V +A D + F ++A
Sbjct 154 VIKMDPSTVVSAFASKQIDAAGIWYPLIGTIKEHVPGMVELAANSDFFPDKTFPSAFIAR 213
Query 243 RKFAQNHPEVLKTLVKELNQSTEWVKTHQDDAAKLLEKPTALDFNILKT 291
+ +PE +K ++ + ++ ++ + + + + K +D L+T
Sbjct 214 NEIVAENPEAVKRMIAVIEEAEDFRTANPEQSVDITAKFLKVDKANLET 262
>Q576E1 Putative binding protein BruAb2_1122 [Brucella abortus
biovar 1 (strain 9-941)]
Length=319
Score = 68.9 bits (167), Expect = 1e-16
Identities = 53/229 (23%), Positives = 106/229 (46%), Gaps = 13/229 (6%)
Query 67 IVKERGELDKILKKEGITIKWVEFPAGPQLLEGLNVGSVVFGEAGEAPPIFAQAANSNLV 126
I E+G + +K G+ F GP ++ L GS+ FG G + + +V
Sbjct 43 IASEKG----LWEKHGLDADTRVFTNGPIQVQALGAGSLDFGYIGPGALWLPASGKAKIV 98
Query 127 YVANQPAAPNAEALIVQKNSSVHSVQDLKGKRIALNKGSNVHYLLLKLLEKNHLTLNDIQ 186
+ + ++ +I Q+ S+ DLKGK+I + +G++ LL L K + L+D+Q
Sbjct 99 AINS---VGFSDRVIAQEGFK--SMADLKGKKIGVPEGTSGDMLLRLALGKAGMKLDDVQ 153
Query 187 VVYLPPADARAAFEKGAVDAWVIWDPFFAAAEQQIGARV-IATGQDLVSNHQF---YLAD 242
V+ + P+ +AF +DA IW P ++ + V +A D + F ++A
Sbjct 154 VIKMDPSTVVSAFASKQIDAAGIWYPLIGTIKEHVPGMVELAANSDFFPDKTFPSAFIAR 213
Query 243 RKFAQNHPEVLKTLVKELNQSTEWVKTHQDDAAKLLEKPTALDFNILKT 291
+ +PE +K ++ + ++ ++ + + + + K +D L+T
Sbjct 214 NEIVAENPEAVKRMIAVIEEAEDFRTANPEQSVDITAKFLKVDKANLET 262
>Q8YDR6 Putative binding protein BMEII0109 [Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)]
Length=319
Score = 68.9 bits (167), Expect = 1e-16
Identities = 53/229 (23%), Positives = 106/229 (46%), Gaps = 13/229 (6%)
Query 67 IVKERGELDKILKKEGITIKWVEFPAGPQLLEGLNVGSVVFGEAGEAPPIFAQAANSNLV 126
I E+G + +K G+ F GP ++ L GS+ FG G + + +V
Sbjct 43 IASEKG----LWEKHGLDADTRVFTNGPIQVQALGAGSLDFGYIGPGALWLPASGKAKIV 98
Query 127 YVANQPAAPNAEALIVQKNSSVHSVQDLKGKRIALNKGSNVHYLLLKLLEKNHLTLNDIQ 186
+ + ++ +I Q+ S+ DLKGK+I + +G++ LL L K + L+D+Q
Sbjct 99 AINS---VGFSDRVIAQEGFK--SMADLKGKKIGVPEGTSGDMLLRLALGKAGMKLDDVQ 153
Query 187 VVYLPPADARAAFEKGAVDAWVIWDPFFAAAEQQIGARV-IATGQDLVSNHQF---YLAD 242
V+ + P+ +AF +DA IW P ++ + V +A D + F ++A
Sbjct 154 VIKMDPSTVVSAFASKQIDAAGIWYPLIGTIKEHVPGMVELAANSDFFPDKTFPSAFIAR 213
Query 243 RKFAQNHPEVLKTLVKELNQSTEWVKTHQDDAAKLLEKPTALDFNILKT 291
+ +PE +K ++ + ++ ++ + + + + K +D L+T
Sbjct 214 NEIVAENPEAVKRMIAVIEEAEDFRTANPEQSVDITAKFLKVDKANLET 262
>P0A3T2 31 kDa immunogenic protein [Brucella melitensis biotype
1 (strain 16M / ATCC 23456 / NCTC 10094)]
Length=329
Score = 45.4 bits (106), Expect = 7e-09
Identities = 42/165 (25%), Positives = 79/165 (48%), Gaps = 19/165 (12%)
Query 135 PNAEALIVQKNSSVHSVQDLKGKRIALNK-GSNVHYLLLKLLEKNHLTLNDIQVVYLPPA 193
P ++ +K++++ SV DLKGKR++L++ GS +LE LT +DI+ +L P
Sbjct 126 PETIHIVARKDANIKSVADLKGKRVSLDEPGSGTIVDARIVLEAYGLTEDDIKAEHLKPG 185
Query 194 DARAAFEKGAVDAWVIWDPFFAAAEQQIG-----ARVIATGQD---LVSNHQFYLADRKF 245
A + GA+DA+ + A ++ + V +G + ++ + F+ D
Sbjct 186 PAGERLKDGALDAYFFVGGYPTGAISELAISNGISLVPISGPEADKILEKYSFFSKDVVP 245
Query 246 AQNHPEVLKTLVKELNQSTEWVKTHQDDAAKLLEKPTALDFNILK 290
A + +V +T L + +WV + ++P L +NI K
Sbjct 246 AGAYKDVAET--PTLAVAAQWVTS--------AKQPDDLIYNITK 280
>P0A3T3 31 kDa immunogenic protein [Brucella abortus biovar 1
(strain 9-941)]
Length=329
Score = 45.4 bits (106), Expect = 7e-09
Identities = 42/165 (25%), Positives = 79/165 (48%), Gaps = 19/165 (12%)
Query 135 PNAEALIVQKNSSVHSVQDLKGKRIALNK-GSNVHYLLLKLLEKNHLTLNDIQVVYLPPA 193
P ++ +K++++ SV DLKGKR++L++ GS +LE LT +DI+ +L P
Sbjct 126 PETIHIVARKDANIKSVADLKGKRVSLDEPGSGTIVDARIVLEAYGLTEDDIKAEHLKPG 185
Query 194 DARAAFEKGAVDAWVIWDPFFAAAEQQIG-----ARVIATGQD---LVSNHQFYLADRKF 245
A + GA+DA+ + A ++ + V +G + ++ + F+ D
Sbjct 186 PAGERLKDGALDAYFFVGGYPTGAISELAISNGISLVPISGPEADKILEKYSFFSKDVVP 245
Query 246 AQNHPEVLKTLVKELNQSTEWVKTHQDDAAKLLEKPTALDFNILK 290
A + +V +T L + +WV + ++P L +NI K
Sbjct 246 AGAYKDVAET--PTLAVAAQWVTS--------AKQPDDLIYNITK 280
>P44658 Putative thiamine biosynthesis protein HI_0357 [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=314
Score = 39.7 bits (91), Expect = 5e-07
Identities = 61/267 (23%), Positives = 117/267 (44%), Gaps = 22/267 (8%)
Query 79 KKEGITIKWVEFPAGPQLLEGLNVGSVVFGEAGEAPPIFAQAANS-NLVYVANQPAAPNA 137
+K + ++ +E PA P L L V P ++ Q A LV V + + P
Sbjct 51 EKNNLEVEIIE-PADPALPPKLAAAEKVDLAVSYQPQLYQQVAEGLPLVRVGSLISNP-L 108
Query 138 EALIVQKNSSVHSVQDLKGKRIALNKGSNVHYLLLKLLEKNHLTLNDIQVV----YLPPA 193
+++V K S++ S+ DLKGK++ + LL +L L+ D+++V L P+
Sbjct 109 NSVVVLKKSNLKSLADLKGKKVGYSVSGFEDGLLDTMLHSIGLSNKDVELVNVNWSLSPS 168
Query 194 DARAAFEKGAVDAWVIWDPFFAAAEQQIGARVIATGQDLVSNHQFYLADRKFAQNHPEVL 253
+ + A+ ++ A E+Q G + + + L K + +
Sbjct 169 LLTGQVD-AVIGAFRNFELNQLALEKQEGIAFFPEQYGVPAYDELILVANKNSVTDKKT- 226
Query 254 KTLVKELNQSTEWVKTHQDDA--AKLLEKPTALDFNILKTSISRMGFGVTP--LSNTV-- 307
+ L Q+T +++ H ++A A + KP N L T ++++ + T L+N
Sbjct 227 SAFLTALEQATSYLQAHPNEAWQAFVSYKP-----NELNTPLNQLAWKDTLPFLANKPRQ 281
Query 308 --INEQQQVADAFYQQKLIPQPLKIQD 332
QQ+A+ Q+ LIP+ L +++
Sbjct 282 LDAKRYQQMAEFMQQKGLIPKALALKE 308
>P73450 Nitrate import ATP-binding protein NrtC [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=670
Score = 36.2 bits (82), Expect = 9e-06
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 4/102 (4%)
Query 184 DIQVVYLPPADARAAFEKGAVDAWVIWDPFFAAAEQQIGARVIATGQDLVSNHQFYLAD- 242
DI ++ LPP + E G +D + + +P+ + A +Q VIAT D+ + H +
Sbjct 429 DINLMRLPPPQMVSNLEAGNIDGFCVGEPWNSYAVKQNLGYVIATDLDIWNGHPEKVLGM 488
Query 243 -RKFAQNHPEVLKTLVKELNQSTEWV--KTHQDDAAKLLEKP 281
++ +P LVK L ++ E+ + H+ + L P
Sbjct 489 REEWVNKYPATHLALVKALLEACEYCDDRRHRQEILDYLALP 530
Score = 18.9 bits (37), Expect = 2.3
Identities = 12/35 (34%), Positives = 17/35 (49%), Gaps = 2/35 (6%)
Query 94 PQLLEGLNVGSVVFGEAGEAPPIFAQAANSNLVYV 128
PQ++ L G++ GE P + A NL YV
Sbjct 438 PQMVSNLEAGNIDGFCVGE--PWNSYAVKQNLGYV 470
Score = 17.3 bits (33), Expect = 6.9
Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
Query 59 FQKYGLLP 66
FQ Y LLP
Sbjct 84 FQNYSLLP 91
Score = 16.9 bits (32), Expect = 9.1
Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
Query 267 VKTHQDDAAKLLEKP 281
VKT +D KL E P
Sbjct 382 VKTLEDLRLKLAETP 396
Lambda K H a alpha
0.319 0.134 0.391 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1004624
Database: c79118f46df7cdaa42c82412a5edaf04.SwissProt.fasta
Posted date: May 9, 2024 5:04 PM
Number of letters in database: 3,889
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
