BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: b691d7ad8b4794558805382a0d2253f4.SwissProt.fasta
           2 sequences; 425 total letters



Query= ACIAD0051

Length=152
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A1WSJ3 LexA repressor [Verminephrobacter eiseniae (strain EF01-2)]    42.4    9e-10
Q21JT2 LexA repressor [Saccharophagus degradans (strain 2-40 / AT...  32.7    2e-06


>A1WSJ3 LexA repressor [Verminephrobacter eiseniae (strain EF01-2)]
Length=224

 Score = 42.4 bits (98),  Expect = 9e-10
 Identities = 22/67 (33%), Positives = 35/67 (52%), Gaps = 8/67 (12%)

Query  22   MSQEDIEQTLKAEQLYFQHRPKAMYYLAVNGSKTKQGGLVKA------SATQGKIGDLSI  75
            ++QE +EQT   E   FQH+P   Y L V G   +  G++        +  + + G + +
Sbjct  112  LAQEHVEQTYSVENGLFQHKPD--YLLKVRGMSMRDAGIIDGDLLAVQATREARNGQIIV  169

Query  76   ARIGDDV  82
            AR+GDDV
Sbjct  170  ARLGDDV  176


>Q21JT2 LexA repressor [Saccharophagus degradans (strain 2-40 
/ ATCC 43961 / DSM 17024)]
Length=201

 Score = 32.7 bits (73),  Expect = 2e-06
 Identities = 21/67 (31%), Positives = 34/67 (51%), Gaps = 8/67 (12%)

Query  22   MSQEDIEQTLKAEQLYFQHRPKAMYYLAVNGSKTKQGGLVKA------SATQGKIGDLSI  75
            +++++IE        +F   P+A Y L V G   +  G++        S TQ K GD+ +
Sbjct  88   LAEQNIEDYCDVPPDFFY--PQANYLLKVQGMSMRDAGILDGDLLAVHSTTQVKNGDIVV  145

Query  76   ARIGDDV  82
            ARI D+V
Sbjct  146  ARIEDEV  152



Lambda      K        H        a         alpha
   0.319    0.138    0.391    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 48256


  Database: b691d7ad8b4794558805382a0d2253f4.SwissProt.fasta
    Posted date:  May 9, 2024  11:45 AM
  Number of letters in database: 425
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40