BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 419f14a759d0aabd397705a458fc310b.SwissProt.fasta
           1 sequences; 1,427 total letters



Query= ACIAD0052

Length=183
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P0DUH5 Double-stranded DNA deaminase toxin A [Burkholderia cenoce...  33.9    6e-06


>P0DUH5 Double-stranded DNA deaminase toxin A [Burkholderia cenocepacia 
(strain H111)]
Length=1427

 Score = 33.9 bits (76),  Expect = 6e-06
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 20/85 (24%)

Query  26   SQQGNLFVRAGD--------------GHFCPKCKCWSTVIKSHDHVIMDGKPVAYAGDKL  71
            SQ GN+   + D              G  C K      V +   ++ ++G+P A   DK+
Sbjct  73   SQSGNIITGSPDVYVNSLSAAYATLSGVACSKHNPIPLVAQGSTNIFINGRPAARKDDKI  132

Query  72   TCGATIQPQQSHVVGDSGSYYNGST  96
            TCGATI        G   ++++G T
Sbjct  133  TCGATIGD------GSHDTFFHGGT  151


 Score = 18.5 bits (36),  Expect = 0.54
 Identities = 6/19 (32%), Positives = 12/19 (63%), Gaps = 0/19 (0%)

Query  146  SNGKTLRFETKKQSQVTEF  164
            ++G+T  +    QSQ+ E+
Sbjct  497  ADGRTAHWRFDAQSQIVEY  515


 Score = 17.7 bits (34),  Expect = 0.95
 Identities = 7/19 (37%), Positives = 11/19 (58%), Gaps = 0/19 (0%)

Query  145  DSNGKTLRFETKKQSQVTE  163
            D  G+  +FE   + +VTE
Sbjct  362  DQAGQWYQFERDSRGRVTE  380


 Score = 15.8 bits (29),  Expect = 3.8
 Identities = 13/43 (30%), Positives = 17/43 (40%), Gaps = 8/43 (19%)

Query  131  YRLKVDGNVIEGTLD--------SNGKTLRFETKKQSQVTEFE  165
            YR  V+G + E   D        S G  L  ET+    +  FE
Sbjct  738  YRYDVEGRLRELQQDHARYTFTYSAGGRLLTETRPDGILRRFE  780


 Score = 15.0 bits (27),  Expect = 6.7
 Identities = 8/22 (36%), Positives = 14/22 (64%), Gaps = 2/22 (9%)

Query  84   VVGDSGSYYNGSTNFSQNLLDS  105
            +V + GS  NGS  ++ + LD+
Sbjct  870  LVAEHGS--NGSVIYTLDELDN  889



Lambda      K        H        a         alpha
   0.320    0.137    0.413    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 207557


  Database: 419f14a759d0aabd397705a458fc310b.SwissProt.fasta
    Posted date:  May 8, 2024  2:26 PM
  Number of letters in database: 1,427
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40