BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 81cfe99020a401b0b830bde17121d86b.SwissProt.fasta
14 sequences; 5,335 total letters
Query= ACIAD0070
Length=368
Score E
Sequences producing significant alignments: (Bits) Value
Q46629 Amylovoran export outer membrane protein AmsH [Erwinia amy... 182 2e-57
Q8ZNQ9 Putative polysaccharide export protein wza [Salmonella typ... 177 2e-55
P58597 EPS I polysaccharide export outer membrane protein EpsA [R... 177 2e-55
P0A934 Putative polysaccharide export protein GfcE [Shigella flex... 174 3e-54
P0A932 Putative polysaccharide export protein GfcE [Escherichia c... 174 3e-54
P0A933 Putative polysaccharide export protein GfcE [Escherichia c... 174 3e-54
Q45407 EPS I polysaccharide export outer membrane protein EpsA [R... 173 4e-54
Q8Z5G4 Putative polysaccharide export protein wza [Salmonella typhi] 173 5e-54
P0A931 Putative polysaccharide export protein wza [Escherichia co... 169 2e-52
P0A930 Putative polysaccharide export protein Wza [Escherichia co... 169 2e-52
Q48450 Putative capsule polysaccharide export protein [Klebsiella... 167 1e-51
P32758 Capsule polysaccharide export outer membrane protein CtrA ... 68.2 6e-16
P0A0V9 Capsule polysaccharide export outer membrane protein CtrA ... 63.5 2e-14
P0A0V8 Capsule polysaccharide export outer membrane protein CtrA ... 63.5 2e-14
>Q46629 Amylovoran export outer membrane protein AmsH [Erwinia
amylovora]
Length=377
Score = 182 bits (462), Expect = 2e-57
Identities = 108/354 (31%), Positives = 180/354 (51%), Gaps = 11/354 (3%)
Query 18 GCAVTSG----LQSYDVPDQGRYETNLGAVLNVVKLTPETVQAFSLDHAVVQQNYAALFK 73
GC + G DV +Q + ++ +N+ LTP V+ V Q N +
Sbjct 20 GCTIVPGNHLSTMGKDVVEQQDSDFDIDKYVNIFPLTPSLVERMKPKPVVAQANATLQRE 79
Query 74 DQRVAYRLTNGDVLSIQLWAYPEITPPLGNNVSNDLSAQSIGYPIDSSGYIQFPLIGRYK 133
Q YR+ GDVL + +W +PE+T P G SA G + S G I +P IGR +
Sbjct 80 LQNYEYRIGVGDVLMVTVWDHPELTTPAGQY----RSASDTGNWVHSDGTIFYPYIGRVR 135
Query 134 AEGKTLEQVNRELPQLLKRYLKNPDLTARVISYEGKPYSVQGNVTKGGVFYLRDQPISVY 193
G T+++ E+ L +Y+++P + V S++ + V G VT G + + P+++
Sbjct 136 VAGHTVQETRDEIASRLSKYVESPQVDVNVASFKSQKTYVTGEVTTSGQQAITNVPLTIL 195
Query 194 TALGLAGGVTELGDNTSVRLIRNGVTYNLNTIELEKAGYSLHKLLLQPDDTLYVNARENQ 253
A+ AGG+T D +V L +G ++ L + G LL P D LYV ++
Sbjct 196 DAINAAGGLTATADWRNVVLTHDGREQPVSLQALMQNGDLSQNHLLYPGDILYVPRNDDL 255
Query 254 KIYVMGEAQKNQALPMRDQGMTLSDVLGESLGINPTSASASRVYVLRT---NPKDHTSEL 310
K++VMGE ++ L M GMTLS+ LG + G++ + A A+ V+V+R + + +
Sbjct 256 KVFVMGEVKQQATLKMDRSGMTLSEALGSAQGMDQSVADATGVFVIRPVKGANRSKIANI 315
Query 311 FHLNLMSLGDFSLANQFQMKSNDIVYVDATGLTRWQRVVNQIIPFSNALYNLDR 364
+ LN + +F+++ DIVYV +T LTRW RV++Q++P + +Y+ R
Sbjct 316 YQLNTKDAAAMVMGTEFRLEPYDIVYVTSTPLTRWNRVISQLVPTISGVYDATR 369
>Q8ZNQ9 Putative polysaccharide export protein wza [Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=379
Score = 177 bits (449), Expect = 2e-55
Identities = 109/359 (30%), Positives = 186/359 (52%), Gaps = 20/359 (6%)
Query 8 IILSLSLGSFGCAVTSG----LQSYDVPDQGRYETNLGAVLNVVKLTPETVQAFSLDHAV 63
++ SLSL S GC V G DV Q + +L ++NV LTP V+ V
Sbjct 11 LLASLSLIS-GCTVLPGSNMSTMGKDVIKQQDADFDLDRMVNVYPLTPRLVEQLRPRPNV 69
Query 64 VQQNYAALFKDQRVA---YRLTNGDVLSIQLWAYPEITPPLGNNVSNDLSAQSIGYPIDS 120
Q N + DQ +A YR+ GDVL++ +W +PE+T P G S+ G +
Sbjct 70 AQPNMSL---DQEIASYQYRVGPGDVLNVTVWDHPELTTPAGQY----RSSSDTGNWVQP 122
Query 121 SGYIQFPLIGRYKAEGKTLEQVNRELPQLLKRYLKNPDLTARVISYEGKPYSVQGNVTKG 180
G + +P IG+ GKTL ++ ++ L +Y+ +P + + ++ + + G V K
Sbjct 123 DGTMFYPYIGKVSVVGKTLSEIRSDITGRLAKYIADPQVDVNIAAFRSQKAYISGQVNKS 182
Query 181 GVFYLRDQPISVYTALGLAGGVTELGDNTSVRLIRNGVTYNLNTIELEKAGYSLHKLLLQ 240
G + + P++V A+ AGG+T++ D +V L NG ++ L + G LL
Sbjct 183 GQQAITNVPLTVLDAINAAGGLTDMADWRNVVLTHNGKEQRISLQALMQNGDLSQNRLLY 242
Query 241 PDDTLYVNARENQKIYVMGEAQKNQALPMRDQGMTLSDVLGESLGINPTSASASRVYVLR 300
P D LYV ++ K++VMGE +K L M GMTL++ LG + GI+ T+++AS ++V+R
Sbjct 243 PGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGMTLTEALGNAEGIDLTTSNASGIFVIR 302
Query 301 TNPKD-----HTSELFHLNLMSLGDFSLANQFQMKSNDIVYVDATGLTRWQRVVNQIIP 354
+ + ++ L++ +A +F+++ D+VYV + RW R++NQ++P
Sbjct 303 PLKGEGGRGGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAPVARWNRLINQLLP 361
>P58597 EPS I polysaccharide export outer membrane protein EpsA
[Ralstonia nicotianae (strain GMI1000)]
Length=381
Score = 177 bits (448), Expect = 2e-55
Identities = 116/354 (33%), Positives = 192/354 (54%), Gaps = 17/354 (5%)
Query 19 CAVTSGLQSYDVPDQGRYETNLGAVLNVVKLTPETVQAFSLDHAVVQQNYAALFKDQRVA 78
CA G++ +D P + + +V + +TP+ V+A A VQ ++ +A
Sbjct 24 CAFAPGMR-FD-PQRPLDPADNASVPKITPITPDLVRA-GQTQAQVQASHENADVGPLLA 80
Query 79 ----YRLTNGDVLSIQLWAYPEITPP-----LGN--NVSNDLSAQSI-GYPIDSSGYIQF 126
YR+ GD+LSI +W +PE+ P +G+ ++++ A S+ GY + + G IQF
Sbjct 81 KATPYRIGTGDILSIVVWDHPELVFPTQTYSIGSTYDLASFGGAPSVSGYVVSTGGDIQF 140
Query 127 PLIGRYKAEGKTLEQVNRELPQLLKRYLKNPDLTARVISYEGKPYSVQGNVTKGGVFYLR 186
P G K GKT +V E+ + + R +K+P +T RV++Y + V G V G +
Sbjct 141 PYAGVIKVAGKTQNEVRDEISRGIARVVKDPQVTVRVLAYRSQRVYVDGEVKTPGQQSID 200
Query 187 DQPISVYTALGLAGGV-TELGDNTSVRLIRNGVTYNLNTIELEKAGYSLHKLLLQPDDTL 245
D P+++ AL AGG+ T GDN+ +RL R G + L+ L + G +LL+ D +
Sbjct 201 DVPMTLVEALNRAGGINTTTGDNSRIRLTRGGKQWTLSMPALMQQGIDPANILLRGGDIV 260
Query 246 YVNARENQKIYVMGEAQKNQALPMRDQGMTLSDVLGESLGINPTSASASRVYVLRTNPKD 305
V RE+ K++V GE + + R+ +TLS+ LGE+ G++P S+ VYV+R +
Sbjct 261 RVEQREDSKVFVTGEVVRPSTVLPRNGRLTLSEALGEAGGVSPVSSDPRNVYVIR-RAAE 319
Query 306 HTSELFHLNLMSLGDFSLANQFQMKSNDIVYVDATGLTRWQRVVNQIIPFSNAL 359
+++HL+ S +LA F++K D+VYVDA L RW RV+N ++P + L
Sbjct 320 GEPQVYHLDAKSPVALALAEGFELKPKDVVYVDAGSLVRWSRVINLLVPTATPL 373
>P0A934 Putative polysaccharide export protein GfcE [Shigella
flexneri]
Length=379
Score = 174 bits (440), Expect = 3e-54
Identities = 104/344 (30%), Positives = 172/344 (50%), Gaps = 10/344 (3%)
Query 22 TSGLQSYDVPDQGRYETNLGAVLNVVKLTPETVQAFSLDHAVVQQNYAALFKDQRVAYRL 81
TS ++PD + +L ++N+ +TP + + Q N + YR+
Sbjct 31 TSNKDVIELPDN---QYDLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRI 87
Query 82 TNGDVLSIQLWAYPEITPPLGNNVSNDLSAQSIGYPIDSSGYIQFPLIGRYKAEGKTLEQ 141
GDVL + +W +PE+T P G SA G +++ G I +P IGR K GKTL Q
Sbjct 88 GIGDVLMVTVWDHPELTTPAGQY----RSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQ 143
Query 142 VNRELPQLLKRYLKNPDLTARVISYEGKPYSVQGNVTKGGVFYLRDQPISVYTALGLAGG 201
V E+ L +++P + V ++ + V G V+K G + + P+++ A+ AGG
Sbjct 144 VRNEITARLDSVIESPQVDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGG 203
Query 202 VTELGDNTSVRLIRNGVTYNLNTIELEKAGYSLHKLLLQPDDTLYVNARENQKIYVMGEA 261
+T D +V L +NGV +N L + G LL P D L++ ++ K++VMGE
Sbjct 204 LTADADWRNVVLTQNGVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEV 263
Query 262 QKNQALPMRDQGMTLSDVLGESLGINPTSASASRVYVLRTNPKDHT---SELFHLNLMSL 318
K L M GMTL++ LG + G+N A A+ ++V+R + ++ LN
Sbjct 264 GKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDA 323
Query 319 GDFSLANQFQMKSNDIVYVDATGLTRWQRVVNQIIPFSNALYNL 362
L +FQ++ DIVYV L RW RV++ ++P + +++L
Sbjct 324 SAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPTISGVHDL 367
Score = 18.1 bits (35), Expect = 5.6
Identities = 17/84 (20%), Positives = 35/84 (42%), Gaps = 1/84 (1%)
Query 215 RNGVTYNLNTIELEKAGYSLHKLL-LQPDDTLYVNARENQKIYVMGEAQKNQALPMRDQG 273
+N T N + IEL Y L K++ + P ++ + I + Q + +
Sbjct 27 QNLSTSNKDVIELPDNQYDLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYR 86
Query 274 MTLSDVLGESLGINPTSASASRVY 297
+ + DVL ++ +P + + Y
Sbjct 87 IGIGDVLMVTVWDHPELTTPAGQY 110
>P0A932 Putative polysaccharide export protein GfcE [Escherichia
coli (strain K12)]
Length=379
Score = 174 bits (440), Expect = 3e-54
Identities = 104/344 (30%), Positives = 172/344 (50%), Gaps = 10/344 (3%)
Query 22 TSGLQSYDVPDQGRYETNLGAVLNVVKLTPETVQAFSLDHAVVQQNYAALFKDQRVAYRL 81
TS ++PD + +L ++N+ +TP + + Q N + YR+
Sbjct 31 TSNKDVIELPDN---QYDLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRI 87
Query 82 TNGDVLSIQLWAYPEITPPLGNNVSNDLSAQSIGYPIDSSGYIQFPLIGRYKAEGKTLEQ 141
GDVL + +W +PE+T P G SA G +++ G I +P IGR K GKTL Q
Sbjct 88 GIGDVLMVTVWDHPELTTPAGQY----RSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQ 143
Query 142 VNRELPQLLKRYLKNPDLTARVISYEGKPYSVQGNVTKGGVFYLRDQPISVYTALGLAGG 201
V E+ L +++P + V ++ + V G V+K G + + P+++ A+ AGG
Sbjct 144 VRNEITARLDSVIESPQVDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGG 203
Query 202 VTELGDNTSVRLIRNGVTYNLNTIELEKAGYSLHKLLLQPDDTLYVNARENQKIYVMGEA 261
+T D +V L +NGV +N L + G LL P D L++ ++ K++VMGE
Sbjct 204 LTADADWRNVVLTQNGVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEV 263
Query 262 QKNQALPMRDQGMTLSDVLGESLGINPTSASASRVYVLRTNPKDHT---SELFHLNLMSL 318
K L M GMTL++ LG + G+N A A+ ++V+R + ++ LN
Sbjct 264 GKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDA 323
Query 319 GDFSLANQFQMKSNDIVYVDATGLTRWQRVVNQIIPFSNALYNL 362
L +FQ++ DIVYV L RW RV++ ++P + +++L
Sbjct 324 SAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPTISGVHDL 367
Score = 18.1 bits (35), Expect = 5.6
Identities = 17/84 (20%), Positives = 35/84 (42%), Gaps = 1/84 (1%)
Query 215 RNGVTYNLNTIELEKAGYSLHKLL-LQPDDTLYVNARENQKIYVMGEAQKNQALPMRDQG 273
+N T N + IEL Y L K++ + P ++ + I + Q + +
Sbjct 27 QNLSTSNKDVIELPDNQYDLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYR 86
Query 274 MTLSDVLGESLGINPTSASASRVY 297
+ + DVL ++ +P + + Y
Sbjct 87 IGIGDVLMVTVWDHPELTTPAGQY 110
>P0A933 Putative polysaccharide export protein GfcE [Escherichia
coli O157:H7]
Length=379
Score = 174 bits (440), Expect = 3e-54
Identities = 104/344 (30%), Positives = 172/344 (50%), Gaps = 10/344 (3%)
Query 22 TSGLQSYDVPDQGRYETNLGAVLNVVKLTPETVQAFSLDHAVVQQNYAALFKDQRVAYRL 81
TS ++PD + +L ++N+ +TP + + Q N + YR+
Sbjct 31 TSNKDVIELPDN---QYDLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRI 87
Query 82 TNGDVLSIQLWAYPEITPPLGNNVSNDLSAQSIGYPIDSSGYIQFPLIGRYKAEGKTLEQ 141
GDVL + +W +PE+T P G SA G +++ G I +P IGR K GKTL Q
Sbjct 88 GIGDVLMVTVWDHPELTTPAGQY----RSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQ 143
Query 142 VNRELPQLLKRYLKNPDLTARVISYEGKPYSVQGNVTKGGVFYLRDQPISVYTALGLAGG 201
V E+ L +++P + V ++ + V G V+K G + + P+++ A+ AGG
Sbjct 144 VRNEITARLDSVIESPQVDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGG 203
Query 202 VTELGDNTSVRLIRNGVTYNLNTIELEKAGYSLHKLLLQPDDTLYVNARENQKIYVMGEA 261
+T D +V L +NGV +N L + G LL P D L++ ++ K++VMGE
Sbjct 204 LTADADWRNVVLTQNGVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEV 263
Query 262 QKNQALPMRDQGMTLSDVLGESLGINPTSASASRVYVLRTNPKDHT---SELFHLNLMSL 318
K L M GMTL++ LG + G+N A A+ ++V+R + ++ LN
Sbjct 264 GKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDA 323
Query 319 GDFSLANQFQMKSNDIVYVDATGLTRWQRVVNQIIPFSNALYNL 362
L +FQ++ DIVYV L RW RV++ ++P + +++L
Sbjct 324 SAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPTISGVHDL 367
Score = 18.1 bits (35), Expect = 5.6
Identities = 17/84 (20%), Positives = 35/84 (42%), Gaps = 1/84 (1%)
Query 215 RNGVTYNLNTIELEKAGYSLHKLL-LQPDDTLYVNARENQKIYVMGEAQKNQALPMRDQG 273
+N T N + IEL Y L K++ + P ++ + I + Q + +
Sbjct 27 QNLSTSNKDVIELPDNQYDLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYR 86
Query 274 MTLSDVLGESLGINPTSASASRVY 297
+ + DVL ++ +P + + Y
Sbjct 87 IGIGDVLMVTVWDHPELTTPAGQY 110
>Q45407 EPS I polysaccharide export outer membrane protein EpsA
[Ralstonia solanacearum]
Length=377
Score = 173 bits (439), Expect = 4e-54
Identities = 112/354 (32%), Positives = 191/354 (54%), Gaps = 21/354 (6%)
Query 19 CAVTSGLQSYDVPDQGRYETNLGAVLNVVKLTPETVQAFSLDHAVVQQNYAALFKDQRVA 78
CA G++ +D P + + +V + ++TP+ V+ V ++N DQ +A
Sbjct 24 CAFAPGMR-FD-PQRPLDPADNASVPKITQITPDLVRGGQAQ--VPRENVDV---DQLLA 76
Query 79 ----YRLTNGDVLSIQLWAYPEITPP-----LGN--NVSNDLSAQSI-GYPIDSSGYIQF 126
YR+ GD+LSI +W +PE+ P +G+ +++N ++ GY + + G IQF
Sbjct 77 KATPYRIGTGDILSIVVWDHPELVFPTQTYSIGSAYDIANFAGTPNVPGYVVSTGGDIQF 136
Query 127 PLIGRYKAEGKTLEQVNRELPQLLKRYLKNPDLTARVISYEGKPYSVQGNVTKGGVFYLR 186
P G K G+T +V E+ + + R +K+P +T RV++Y + V G V G +
Sbjct 137 PYAGVIKVAGRTQNEVRDEITRAIARVVKDPQVTVRVLAYRSQRIYVDGEVKTPGQQSID 196
Query 187 DQPISVYTALGLAGGV-TELGDNTSVRLIRNGVTYNLNTIELEKAGYSLHKLLLQPDDTL 245
D P+++ AL AGG+ GDN+ +R+ R G + L+ L G +LL+ D +
Sbjct 197 DVPMTLVEALNRAGGINVTTGDNSRIRVTRGGKQWVLSMPALMHQGIDPASVLLRGGDIV 256
Query 246 YVNARENQKIYVMGEAQKNQALPMRDQGMTLSDVLGESLGINPTSASASRVYVLRTNPKD 305
V RE+ K++V GE + + R+ +TLS+ LGE+ G++P S+ VYV+R +
Sbjct 257 RVEPREDSKVFVTGEVVRPSTVLPRNGKLTLSEALGEAGGVSPVSSDPRNVYVIR-RAAE 315
Query 306 HTSELFHLNLMSLGDFSLANQFQMKSNDIVYVDATGLTRWQRVVNQIIPFSNAL 359
+++HL+ S +LA F+++ D+VYVDA GL RW RV+N ++P + L
Sbjct 316 GEPQVYHLDAKSPVALALAEGFELRPKDVVYVDAGGLVRWSRVINLLVPTATPL 369
>Q8Z5G4 Putative polysaccharide export protein wza [Salmonella
typhi]
Length=379
Score = 173 bits (439), Expect = 5e-54
Identities = 108/359 (30%), Positives = 184/359 (51%), Gaps = 20/359 (6%)
Query 8 IILSLSLGSFGCAVTSG----LQSYDVPDQGRYETNLGAVLNVVKLTPETVQAFSLDHAV 63
++ SLSL S GC V G DV Q + +L ++NV LTP V+ V
Sbjct 11 LLASLSLIS-GCTVLPGSNMSTMGKDVIKQQDADFDLDRMVNVYPLTPRLVEQLRPRPNV 69
Query 64 VQQNYAALFKDQRVA---YRLTNGDVLSIQLWAYPEITPPLGNNVSNDLSAQSIGYPIDS 120
Q N + DQ +A YR+ GDVL++ +W +PE+T P G S+ G
Sbjct 70 AQPNMSL---DQEIASYQYRVGPGDVLNVTVWDHPELTTPAGQY----RSSSDTGNWAQP 122
Query 121 SGYIQFPLIGRYKAEGKTLEQVNRELPQLLKRYLKNPDLTARVISYEGKPYSVQGNVTKG 180
G + +P IG+ GKTL ++ ++ L +Y+ +P + + ++ + + G V K
Sbjct 123 DGTMFYPYIGKVSVVGKTLSEIRSDITGRLAKYIADPQVDVNIAAFRSQKAYISGQVNKS 182
Query 181 GVFYLRDQPISVYTALGLAGGVTELGDNTSVRLIRNGVTYNLNTIELEKAGYSLHKLLLQ 240
G + + P++V A+ AGG+T++ D +V L NG ++ L + G LL
Sbjct 183 GQQAITNVPLTVLDAINAAGGLTDMADWRNVVLTHNGKEQRISLQALMQNGDLSQNRLLY 242
Query 241 PDDTLYVNARENQKIYVMGEAQKNQALPMRDQGMTLSDVLGESLGINPTSASASRVYVLR 300
P D LYV ++ K++VMGE +K L M MTL++ LG + GI+ T+++AS ++V+R
Sbjct 243 PGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSSMTLTEALGNAEGIDLTTSNASGIFVIR 302
Query 301 TNPKD-----HTSELFHLNLMSLGDFSLANQFQMKSNDIVYVDATGLTRWQRVVNQIIP 354
+ + ++ L++ +A +F+++ D+VYV + RW R++NQ++P
Sbjct 303 PLKGEGGRGGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAPVARWNRLINQLLP 361
>P0A931 Putative polysaccharide export protein wza [Escherichia
coli O157:H7]
Length=379
Score = 169 bits (428), Expect = 2e-52
Identities = 101/356 (28%), Positives = 180/356 (51%), Gaps = 14/356 (4%)
Query 8 IILSLSLGSFGCAVTSG----LQSYDVPDQGRYETNLGAVLNVVKLTPETVQAFSLDHAV 63
+++S++L S GC V G DV Q + +L ++NV LTP + V
Sbjct 11 LLVSVTLIS-GCTVLPGSNMSTMGKDVIKQQDADFDLDKMVNVYPLTPRLIDQLRPRPNV 69
Query 64 VQQNYAALFKDQRVAYRLTNGDVLSIQLWAYPEITPPLGNNVSNDLSAQSIGYPIDSSGY 123
+ N + YR+ GDVL++ +W +PE+T P G S+ G + G
Sbjct 70 ARPNMTLESEIANYQYRVGPGDVLNVTVWDHPELTTPAGQY----RSSSDTGNWVQPDGT 125
Query 124 IQFPLIGRYKAEGKTLEQVNRELPQLLKRYLKNPDLTARVISYEGKPYSVQGNVTKGGVF 183
+ +P IG+ GKTL ++ ++ L Y+ +P + + ++ + + G V K G
Sbjct 126 MFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQVDVNIAAFRSQKAYISGQVNKSGQQ 185
Query 184 YLRDQPISVYTALGLAGGVTELGDNTSVRLIRNGVTYNLNTIELEKAGYSLHKLLLQPDD 243
+ + P+++ A+ AGG+T+ D +V L NG ++ L + G LL P D
Sbjct 186 AITNVPLTILDAINAAGGLTDTADWRNVVLTHNGREERISLQALMQNGDLNQNRLLYPGD 245
Query 244 TLYVNARENQKIYVMGEAQKNQALPMRDQGMTLSDVLGESLGINPTSASASRVYVLRT-- 301
LYV ++ K++VMGE +K L M GMTL++ LG + GI+ T+++AS ++V+R
Sbjct 246 ILYVPRNDDLKVFVMGEVKKQSTLKMDFSGMTLTEALGNAEGIDMTTSNASGIFVIRPLK 305
Query 302 ---NPKDHTSELFHLNLMSLGDFSLANQFQMKSNDIVYVDATGLTRWQRVVNQIIP 354
+ ++ L++ +A +F+++ D+VYV ++RW R++NQ++P
Sbjct 306 GEGGRNGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAPVSRWNRLINQLLP 361
>P0A930 Putative polysaccharide export protein Wza [Escherichia
coli (strain K12)]
Length=379
Score = 169 bits (428), Expect = 2e-52
Identities = 101/356 (28%), Positives = 180/356 (51%), Gaps = 14/356 (4%)
Query 8 IILSLSLGSFGCAVTSG----LQSYDVPDQGRYETNLGAVLNVVKLTPETVQAFSLDHAV 63
+++S++L S GC V G DV Q + +L ++NV LTP + V
Sbjct 11 LLVSVTLIS-GCTVLPGSNMSTMGKDVIKQQDADFDLDKMVNVYPLTPRLIDQLRPRPNV 69
Query 64 VQQNYAALFKDQRVAYRLTNGDVLSIQLWAYPEITPPLGNNVSNDLSAQSIGYPIDSSGY 123
+ N + YR+ GDVL++ +W +PE+T P G S+ G + G
Sbjct 70 ARPNMTLESEIANYQYRVGPGDVLNVTVWDHPELTTPAGQY----RSSSDTGNWVQPDGT 125
Query 124 IQFPLIGRYKAEGKTLEQVNRELPQLLKRYLKNPDLTARVISYEGKPYSVQGNVTKGGVF 183
+ +P IG+ GKTL ++ ++ L Y+ +P + + ++ + + G V K G
Sbjct 126 MFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQVDVNIAAFRSQKAYISGQVNKSGQQ 185
Query 184 YLRDQPISVYTALGLAGGVTELGDNTSVRLIRNGVTYNLNTIELEKAGYSLHKLLLQPDD 243
+ + P+++ A+ AGG+T+ D +V L NG ++ L + G LL P D
Sbjct 186 AITNVPLTILDAINAAGGLTDTADWRNVVLTHNGREERISLQALMQNGDLNQNRLLYPGD 245
Query 244 TLYVNARENQKIYVMGEAQKNQALPMRDQGMTLSDVLGESLGINPTSASASRVYVLRT-- 301
LYV ++ K++VMGE +K L M GMTL++ LG + GI+ T+++AS ++V+R
Sbjct 246 ILYVPRNDDLKVFVMGEVKKQSTLKMDFSGMTLTEALGNAEGIDMTTSNASGIFVIRPLK 305
Query 302 ---NPKDHTSELFHLNLMSLGDFSLANQFQMKSNDIVYVDATGLTRWQRVVNQIIP 354
+ ++ L++ +A +F+++ D+VYV ++RW R++NQ++P
Sbjct 306 GEGGRNGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAPVSRWNRLINQLLP 361
>Q48450 Putative capsule polysaccharide export protein [Klebsiella
pneumoniae]
Length=378
Score = 167 bits (422), Expect = 1e-51
Identities = 106/364 (29%), Positives = 183/364 (50%), Gaps = 18/364 (5%)
Query 10 LSLSLGSF-GCAVT--SGLQSY-----DVPDQGRYETNLGAVLNVVKLTPETVQAFSLDH 61
L+L++G GC + GL S ++PD + +L ++NV +TP + +
Sbjct 11 LALAIGFLSGCTIVPGQGLNSLRKNVVELPDS---DYDLDKLVNVYPMTPGLIDQLRPET 67
Query 62 AVVQQNYAALFKDQRVAYRLTNGDVLSIQLWAYPEITPPLGNNVSNDLSAQSIGYPIDSS 121
+ + N + YR+ GDVL + +W +PE+T P G SA G ++S
Sbjct 68 ILARPNPQLDNLLRSYEYRIGVGDVLMVTVWDHPELTTPAGQY----RSASDTGNWVNSD 123
Query 122 GYIQFPLIGRYKAEGKTLEQVNRELPQLLKRYLKNPDLTARVISYEGKPYSVQGNVTKGG 181
G I +P IG+ + GKTL QV +++ L Y+++P + V ++ + V G V K G
Sbjct 124 GTIFYPYIGKVQVAGKTLSQVRQDIASRLTTYIESPQVDVSVAAFRSQKAYVTGEVAKSG 183
Query 182 VFYLRDQPISVYTALGLAGGVTELGDNTSVRLIRNGVTYNLNTIELEKAGYSLHKLLLQP 241
+ + P++V A+ AGG+ D +V L NG ++ L + G LL P
Sbjct 184 QQPITNIPLTVMDAINAAGGLAPDADWRNVVLTHNGKDTKVSLYALMQKGDLTQNHLLYP 243
Query 242 DDTLYVNARENQKIYVMGEAQKNQALPMRDQGMTLSDVLGESLGINPTSASASRVYVLRT 301
D L+V ++ K++VMGE K L M GMT+++ LG + G++ + A+ V+V+R
Sbjct 244 GDILFVPRNDDLKVFVMGEVGKQSTLKMDRSGMTIAEALGNAEGMSQAFSDATGVFVIRQ 303
Query 302 ---NPKDHTSELFHLNLMSLGDFSLANQFQMKSNDIVYVDATGLTRWQRVVNQIIPFSNA 358
+ + + ++ LN L +FQ++ DIVYV L RW RV++Q++P
Sbjct 304 LKGDKQGKIANIYQLNAQDASAMVLGTEFQLQPYDIVYVTTAPLVRWNRVISQLVPTITG 363
Query 359 LYNL 362
++++
Sbjct 364 VHDM 367
>P32758 Capsule polysaccharide export outer membrane protein CtrA
[Neisseria meningitidis serogroup A / serotype 4A (strain
DSM 15465 / Z2491)]
Length=387
Score = 68.2 bits (165), Expect = 6e-16
Identities = 89/392 (23%), Positives = 155/392 (40%), Gaps = 38/392 (10%)
Query 1 VKLYQSLIILSLSLGSFGCAV-TSGLQSYDVPDQGRYETNLGAVLNVVKLTPETVQAFSL 59
+KL ++I L LGS A+ +SG + V G+ + ++ + Q SL
Sbjct 2 LKLKFCIVISFLILGSACSAIPSSGPSAKKVVSLGQQSEAQIPEVELIDVNHAVAQ--SL 59
Query 60 DHAVVQQNYAALFKDQRVAYRLTNGDVLSIQLW-AYPEITPPLGNNVSNDLSAQSIGYP- 117
A V Q++ L GDVL I +W A P + G + SAQ P
Sbjct 60 YKAQVNQSFTQFGDGYASTGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAQQTKLPE 119
Query 118 --IDSSGYIQFPLIGRYKAEGKTLEQVNRELPQLLKRYLKNPDLTARVISYEGKPYSV-- 173
+ + G + P +G GKT QV + LK+ P + R++ SV
Sbjct 120 QLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVSVIR 179
Query 174 QGNVTKGGVFYLRDQPISVYTALGLAGGVTELGDNTSVRLIRNGVTYNLNTIELEKAGYS 233
GN + + ++ V A+ GG T +T+V+L R V + T+ LE +
Sbjct 180 AGNSVRMPLTAAGER---VLDAVAAVGGSTANVQDTNVQLTRGNV---VRTVALEDLVAN 233
Query 234 LHKLLLQPDDTLYVNARENQKIYVMGEAQKNQALPMRDQGMTLSDVLGESLGINPTSASA 293
+ +L + MG + Q + +G++LS+ +G G+ + A
Sbjct 234 PRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDA 293
Query 294 SRVYVLRTNP--------------KDHTSE-----LFHLNLMSLGDFSLANQFQMKSNDI 334
V+V R P + + SE ++ +N+ +F +K+ D+
Sbjct 294 RGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDV 353
Query 335 VYVDATGLTRWQR----VVNQIIPFSNALYNL 362
+YV L Q+ V + + +N++ NL
Sbjct 354 LYVSNAPLAEVQKFLSFVFSPVTSGANSINNL 385
>P0A0V9 Capsule polysaccharide export outer membrane protein CtrA
[Neisseria meningitidis]
Length=391
Score = 63.5 bits (153), Expect = 2e-14
Identities = 76/346 (22%), Positives = 133/346 (38%), Gaps = 43/346 (12%)
Query 54 VQAFSLDHAVVQQNYAALFKDQRVAY--------RLTNGDVLSIQLW-AYPEITPPLGNN 104
V+ ++H V Q Y A + L GDVL I +W A P + G +
Sbjct 50 VELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLS 109
Query 105 VSNDLSAQSIGYP---IDSSGYIQFPLIGRYKAEGKTLEQVNRELPQLLKRYLKNPDLTA 161
SA P + + G + P +G GKT QV + LK+ P +
Sbjct 110 SMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMV 169
Query 162 RVISYEGKPYSV--QGNVTKGGVFYLRDQPISVYTALGLAGGVTELGDNTSVRLIRNGVT 219
R++ SV GN + + ++ V A+ GG T +T+V+L R V
Sbjct 170 RLVQNNAANVSVIRAGNSVRMPLTAAGER---VLDAVAAVGGSTANVQDTNVQLTRGNV- 225
Query 220 YNLNTIELEKAGYSLHKLLLQPDDTLYVNARENQKIYVMGEAQKNQALPMRDQGMTLSDV 279
+ T+ LE + + +L + MG + Q + +G++LS+
Sbjct 226 --VRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEA 283
Query 280 LGESLGINPTSASASRVYVLRTNP--------------KDHTSE-----LFHLNLMSLGD 320
+G G+ + A V+V R P + + SE ++ +N+
Sbjct 284 IGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHS 343
Query 321 FSLANQFQMKSNDIVYVDATGLTRWQR----VVNQIIPFSNALYNL 362
+F +K+ D++YV L Q+ V + + +N++ NL
Sbjct 344 LFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNL 389
>P0A0V8 Capsule polysaccharide export outer membrane protein CtrA
[Neisseria meningitidis serogroup B (strain MC58)]
Length=391
Score = 63.5 bits (153), Expect = 2e-14
Identities = 76/346 (22%), Positives = 133/346 (38%), Gaps = 43/346 (12%)
Query 54 VQAFSLDHAVVQQNYAALFKDQRVAY--------RLTNGDVLSIQLW-AYPEITPPLGNN 104
V+ ++H V Q Y A + L GDVL I +W A P + G +
Sbjct 50 VELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLS 109
Query 105 VSNDLSAQSIGYP---IDSSGYIQFPLIGRYKAEGKTLEQVNRELPQLLKRYLKNPDLTA 161
SA P + + G + P +G GKT QV + LK+ P +
Sbjct 110 SMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMV 169
Query 162 RVISYEGKPYSV--QGNVTKGGVFYLRDQPISVYTALGLAGGVTELGDNTSVRLIRNGVT 219
R++ SV GN + + ++ V A+ GG T +T+V+L R V
Sbjct 170 RLVQNNAANVSVIRAGNSVRMPLTAAGER---VLDAVAAVGGSTANVQDTNVQLTRGNV- 225
Query 220 YNLNTIELEKAGYSLHKLLLQPDDTLYVNARENQKIYVMGEAQKNQALPMRDQGMTLSDV 279
+ T+ LE + + +L + MG + Q + +G++LS+
Sbjct 226 --VRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEA 283
Query 280 LGESLGINPTSASASRVYVLRTNP--------------KDHTSE-----LFHLNLMSLGD 320
+G G+ + A V+V R P + + SE ++ +N+
Sbjct 284 IGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHS 343
Query 321 FSLANQFQMKSNDIVYVDATGLTRWQR----VVNQIIPFSNALYNL 362
+F +K+ D++YV L Q+ V + + +N++ NL
Sbjct 344 LFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNL 389
Lambda K H a alpha
0.318 0.136 0.388 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1492160
Database: 81cfe99020a401b0b830bde17121d86b.SwissProt.fasta
Posted date: May 9, 2024 12:13 PM
Number of letters in database: 5,335
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
