BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 3450075308d65d74faf0a4ecba16c7ae.SwissProt.fasta
           15 sequences; 3,543 total letters



Query= ACIAD0120

Length=239
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P33128 Probable fimbrial chaperone YadV [Escherichia coli (strain...  127     1e-39
P31697 Chaperone protein FimC [Escherichia coli (strain K12)]         126     4e-39
P59590 Chaperone protein FimC [Escherichia coli O6:H1 (strain CFT...  125     1e-38
P21646 Chaperone protein MrkB [Klebsiella pneumoniae]                 124     1e-38
P35757 Chaperone protein HifB [Haemophilus influenzae]                124     2e-38
P45991 Chaperone protein HifB [Haemophilus influenzae]                121     2e-37
P62610 Chaperone protein FocC [Escherichia coli O6:H1 (strain CFT...  120     3e-37
P62609 Chaperone protein FocC [Escherichia coli]                      120     3e-37
P37923 Chaperone protein FimC [Salmonella typhimurium (strain LT2...  120     5e-37
P33409 Chaperone protein FimB/FhaD [Bordetella pertussis (strain ...  120     7e-37
P33342 Probable fimbrial chaperone YehC [Escherichia coli (strain...  109     1e-32
P43661 Chaperone protein LpfB [Salmonella typhimurium (strain LT2...  105     3e-31
Q8X5K6 Probable fimbrial chaperone LpfB [Escherichia coli O157:H7]    103     2e-30
P40876 Uncharacterized fimbrial chaperone YcbF [Escherichia coli ...  97.4    4e-28
Q8X5E4 Probable fimbrial chaperone protein ElfD [Escherichia coli...  90.1    2e-25


>P33128 Probable fimbrial chaperone YadV [Escherichia coli (strain 
K12)]
Length=246

 Score = 127 bits (320),  Expect = 1e-39
 Identities = 74/226 (33%), Positives = 122/226 (54%), Gaps = 3/226 (1%)

Query  4    CMGSTSIVHSNVVMTGTRVIYPAEQKEKTLQFSNNADQSYLVQIWLDKDNPQSTPETADA  63
            CM  +S   +++V++GTRVIY ++QK   ++  N  +   LVQ WLD  +  + P +   
Sbjct  16   CMAFSSSSIADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITV  75

Query  64   PFLINPQVFRINPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPAL--EKNKLDQNMLV  121
            PF   P V RI+ KRGQ ++++YT    LP DRESVF+ N  ++P     +   +Q++L 
Sbjct  76   PFTATPPVSRIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQ  135

Query  122  LLVKSRIKVFYRPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATVKDN  181
            L  ++RIK+FYRP  + G P ++   L +     +    L V NP+ YYV+ +   ++ +
Sbjct  136  LAFRTRIKLFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEAS  195

Query  182  VLQAKAIDVGMIPPKSTARWKLDQSLVQEVGTEVTLRLVNDYGAYV  227
              +   IDV MI P S    K++    +    +V    +ND+G  +
Sbjct  196  G-KRYPIDVKMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAI  240


>P31697 Chaperone protein FimC [Escherichia coli (strain K12)]
Length=241

 Score = 126 bits (316),  Expect = 4e-39
 Identities = 74/226 (33%), Positives = 122/226 (54%), Gaps = 19/226 (8%)

Query  1    MMYCMGSTSIVHSNVVMTGTRVIYPAEQKEKTLQFSNNADQS-YLVQIWLDKDNPQSTPE  59
            M   M       + V +  TRVIYPA QK++ L  +NN + S YL+Q W++     +   
Sbjct  24   MFMAMMVAGRAEAGVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVE-----NADG  78

Query  60   TADAPFLINPQVFRINPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPALEKNKLDQNM  119
              D  F++ P +F +  K+   +R++   +  LP DRES+F++N K IP+++K+KL +N 
Sbjct  79   VKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENT  138

Query  120  LVLLVKSRIKVFYRPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATVK  179
            L L + SRIK++YRP  +  PP+ + + L +     +    L + NP+ YY+T T+    
Sbjct  139  LQLAIISRIKLYYRPAKLALPPDQAAEKLRFR----RSANSLTLINPTPYYLTVTELNAG  194

Query  180  DNVLQAKAIDVGMIPPKSTARWKLDQSLVQEVGTEVTLRLVNDYGA  225
              VL+       ++PP   +  KL      + G+ +T R +NDYGA
Sbjct  195  TRVLEN-----ALVPPMGESTVKLP----SDAGSNITYRTINDYGA  231


>P59590 Chaperone protein FimC [Escherichia coli O6:H1 (strain 
CFT073 / ATCC 700928 / UPEC)]
Length=241

 Score = 125 bits (313),  Expect = 1e-38
 Identities = 74/226 (33%), Positives = 121/226 (54%), Gaps = 19/226 (8%)

Query  1    MMYCMGSTSIVHSNVVMTGTRVIYPAEQKEKTLQFSNNADQS-YLVQIWLDKDNPQSTPE  59
            M   M       + V +  TRVIYPA QK+  L  +NN + S YL+Q W++     +   
Sbjct  24   MFMAMVVAGRAEAGVALGATRVIYPAGQKQVQLAVTNNDENSTYLIQSWVE-----NADG  78

Query  60   TADAPFLINPQVFRINPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPALEKNKLDQNM  119
              D  F++ P +F +  K+   +R++   +  LP DRES+F++N K IP+++K+KL +N 
Sbjct  79   VKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENT  138

Query  120  LVLLVKSRIKVFYRPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATVK  179
            L L + SRIK++YRP  +  PP+ + + L +     +    L + NP+ YY+T T+    
Sbjct  139  LQLAIISRIKLYYRPAKLALPPDQAAEKLRFR----RSANSLTLINPTPYYLTVTELNAG  194

Query  180  DNVLQAKAIDVGMIPPKSTARWKLDQSLVQEVGTEVTLRLVNDYGA  225
              VL+       ++PP   +  KL      + G+ +T R +NDYGA
Sbjct  195  TRVLEN-----ALVPPMGESAVKLP----SDAGSNITYRTINDYGA  231


>P21646 Chaperone protein MrkB [Klebsiella pneumoniae]
Length=233

 Score = 124 bits (312),  Expect = 1e-38
 Identities = 76/231 (33%), Positives = 131/231 (57%), Gaps = 14/231 (6%)

Query  1    MMYCMGSTSIVHSN-VVMTGTRVIYPAEQKEKTLQFSNNADQSYLVQIWLDKDNPQSTPE  59
            + +C   +   H+N +++ GTR IYP  +KE T+Q SN AD+  L   WLD  N  +TP+
Sbjct  6    LFFCFIFSFAAHANNIIVNGTRFIYPGNEKEITVQLSNTADRPALATAWLDNGNADATPD  65

Query  60   TADAPFLINPQVFRINPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPALEKNKLD--Q  117
            T   PF+I P + R++ K GQ +R+    +A L  D+E++++LN  +IP +E ++ +  Q
Sbjct  66   TITTPFIITPPISRVDAKSGQTLRIKLGSNAGLAKDKETLWWLNLLEIPPVEASQKNEGQ  125

Query  118  NMLVLLVKSRIKVFYRPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQAT  177
            N+L L ++SR K  YRP   +G  + + + L  S     + + L V+NP+ +Y+T ++ +
Sbjct  126  NILQLAIRSRFKFIYRPAG-LGNRDAAAEKLALS----ANGSSLSVSNPTPFYITVSRIS  180

Query  178  VK-DNVLQAKAIDVGMIPPKSTARWKLDQSLVQEVGTEVTLRLVNDYGAYV  227
                  L +K +   M  P+S+    L  ++ +  G  +T+  +NDYGA V
Sbjct  181  RNGGKALNSKTV---MFAPQSSQTIALSSAVSK--GETLTVNNINDYGADV  226


>P35757 Chaperone protein HifB [Haemophilus influenzae]
Length=241

 Score = 124 bits (311),  Expect = 2e-38
 Identities = 77/217 (35%), Positives = 116/217 (53%), Gaps = 14/217 (6%)

Query  12   HSNVVMTGTRVIYPAEQKEKTLQFSNNADQSYLVQIWLDKDNPQSTPETADAPFLINPQV  71
            ++NV++TGTRVIYPA QK   ++  NN D + LVQ W+D  NP + P+    PF+I P V
Sbjct  27   NANVIITGTRVIYPAGQKNVIVKLENNDDSAALVQAWIDNGNPNADPKYTKTPFVITPPV  86

Query  72   FRINPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPA---LEKNKLDQNMLVLLVKSRI  128
             R+  K GQ +R+ +TG   LP DRES+FY N   IP     E      + + + ++SR+
Sbjct  87   ARVEAKSGQSLRITFTGGEPLPDDRESLFYFNLLDIPPKPDAEFLAKHGSFMQIAIRSRL  146

Query  129  KVFYRPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATVKDNVLQAKAI  188
            K+FYRP  +   P D+ K + +       L    V+N + YY+       ++      A 
Sbjct  147  KLFYRPAKLSLDPFDAMKKVVFKATPKGVL----VDNQTPYYMNYIGLLHQNK----PAK  198

Query  189  DVGMIPPKSTARWKLDQSLVQEVGTEVTLRLVNDYGA  225
            +V M+ P S A   + ++     G ++   LVNDYGA
Sbjct  199  NVKMVAPFSQA---VFEAKGVRSGDKLKWVLVNDYGA  232


>P45991 Chaperone protein HifB [Haemophilus influenzae]
Length=241

 Score = 121 bits (304),  Expect = 2e-37
 Identities = 74/217 (34%), Positives = 115/217 (53%), Gaps = 14/217 (6%)

Query  12   HSNVVMTGTRVIYPAEQKEKTLQFSNNADQSYLVQIWLDKDNPQSTPETADAPFLINPQV  71
            +++V++TGTRVIYPA QK   ++  NN D + LVQ W+D  NP + P+    PF+I P V
Sbjct  27   NADVIITGTRVIYPAGQKNVIVKLENNDDSAALVQAWIDNGNPNADPKYTKTPFVITPPV  86

Query  72   FRINPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPALEKNKL---DQNMLVLLVKSRI  128
             R+  K GQ +R+ +TG   LP DRES+FY N   IP            + + + ++SR+
Sbjct  87   ARVEAKSGQSLRITFTGSEPLPDDRESLFYFNLLDIPPKPDAAFLAKHGSFMQIAIRSRL  146

Query  129  KVFYRPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATVKDNVLQAKAI  188
            K+FYRP  +     D+ K + +    +  L    V+N + YY+       ++      A 
Sbjct  147  KLFYRPAKLSMDSRDAMKKVVFKATPEGVL----VDNQTPYYMNYIGLLHQNK----PAK  198

Query  189  DVGMIPPKSTARWKLDQSLVQEVGTEVTLRLVNDYGA  225
            +V M+ P S A   + ++     G ++   LVNDYGA
Sbjct  199  NVKMVAPFSQA---VFEAKGVRSGDKLKWVLVNDYGA  232


>P62610 Chaperone protein FocC [Escherichia coli O6:H1 (strain 
CFT073 / ATCC 700928 / UPEC)]
Length=227

 Score = 120 bits (302),  Expect = 3e-37
 Identities = 71/220 (32%), Positives = 120/220 (55%), Gaps = 18/220 (8%)

Query  12   HSNVVMTGTRVIYPAEQKEKTLQFSNNADQS-YLVQIWLDKDNPQSTPETADAPFLINPQ  70
            ++ V +  TRVIYP  QK+  L  +NN D+S YL+Q W++    +      DA F+I P 
Sbjct  20   YAGVALGATRVIYPEGQKQVQLAVTNNDDKSSYLIQSWIENAEGKK-----DARFVITPP  74

Query  71   VFRINPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPALEKNKLDQNMLVLLVKSRIKV  130
            +F +  K+   +R++   +  +P DRES+F++N K IPA++K K  +N L   + SRIK+
Sbjct  75   LFSMQGKKENTLRIIDATNGQMPEDRESLFWVNVKAIPAMDKAKTGENYLQFAIVSRIKL  134

Query  131  FYRPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATVKDNVLQAKAIDV  190
             YRP+ ++ PPE +   L ++    +    L + NP+ YY+T T     +     K+++ 
Sbjct  135  LYRPQGLVIPPEQAPGKLEFT----RENGGLTLFNPTPYYLTVTDLKAGN-----KSLEN  185

Query  191  GMIPPKSTARWKLDQSLVQEVGTEVTLRLVNDYGAYVNQL  230
             M+PP+      +        G ++T + +NDYGA   Q+
Sbjct  186  TMVPPQGKVTVNIPGGY---TGGDITYKTINDYGALTEQV  222


>P62609 Chaperone protein FocC [Escherichia coli]
Length=227

 Score = 120 bits (302),  Expect = 3e-37
 Identities = 71/220 (32%), Positives = 120/220 (55%), Gaps = 18/220 (8%)

Query  12   HSNVVMTGTRVIYPAEQKEKTLQFSNNADQS-YLVQIWLDKDNPQSTPETADAPFLINPQ  70
            ++ V +  TRVIYP  QK+  L  +NN D+S YL+Q W++    +      DA F+I P 
Sbjct  20   YAGVALGATRVIYPEGQKQVQLAVTNNDDKSSYLIQSWIENAEGKK-----DARFVITPP  74

Query  71   VFRINPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPALEKNKLDQNMLVLLVKSRIKV  130
            +F +  K+   +R++   +  +P DRES+F++N K IPA++K K  +N L   + SRIK+
Sbjct  75   LFSMQGKKENTLRIIDATNGQMPEDRESLFWVNVKAIPAMDKAKTGENYLQFAIVSRIKL  134

Query  131  FYRPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATVKDNVLQAKAIDV  190
             YRP+ ++ PPE +   L ++    +    L + NP+ YY+T T     +     K+++ 
Sbjct  135  LYRPQGLVIPPEQAPGKLEFT----RENGGLTLFNPTPYYLTVTDLKAGN-----KSLEN  185

Query  191  GMIPPKSTARWKLDQSLVQEVGTEVTLRLVNDYGAYVNQL  230
             M+PP+      +        G ++T + +NDYGA   Q+
Sbjct  186  TMVPPQGKVTVNIPGGY---TGGDITYKTINDYGALTEQV  222


>P37923 Chaperone protein FimC [Salmonella typhimurium (strain 
LT2 / SGSC1412 / ATCC 700720)]
Length=230

 Score = 120 bits (301),  Expect = 5e-37
 Identities = 79/215 (37%), Positives = 119/215 (55%), Gaps = 25/215 (12%)

Query  15   VVMTGTRVIYPAEQKEKTLQFSNNADQS-YLVQIWLDKDNPQSTPETADAPFLINPQVFR  73
            + +  TRVIYP+  K+ +L  SN+  Q  YLV  W++ +  Q      +  F++ P +F 
Sbjct  27   IALGATRVIYPSAAKQTSLAISNSDTQERYLVNSWIENNAGQK-----EKTFIVTPPLFV  81

Query  74   INPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPALEKNKLD-QNMLVLLVKSRIKVFY  132
              PK    +R++Y G   LP DRES+F++N K IP+++K+ ++ +N+L L + SRIK+F 
Sbjct  82   SEPKSENTLRIIYAGQP-LPGDRESLFWMNVKAIPSVDKSHIEGKNVLQLAILSRIKLFV  140

Query  133  RPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATVKDNVLQAKAIDVGM  192
            RP  +   PED+   L +S V +     L++ NPS YY+T    +V      AK ID  M
Sbjct  141  RPANLPQTPEDAPTLLKFSRVGNH----LKITNPSAYYLTLVNISV-----GAKKIDNVM  191

Query  193  IPPKSTARWKLDQSLVQEVGTE--VTLRLVNDYGA  225
            I PKS      D  +    G +  VT + VNDYGA
Sbjct  192  IAPKS------DMQIPLPTGAQGNVTFQSVNDYGA  220


>P33409 Chaperone protein FimB/FhaD [Bordetella pertussis (strain 
Tohama I / ATCC BAA-589 / NCTC 13251)]
Length=244

 Score = 120 bits (301),  Expect = 7e-37
 Identities = 64/172 (37%), Positives = 101/172 (59%), Gaps = 6/172 (3%)

Query  13   SNVVMTGTRVIYPAEQKEKTLQFSNNADQSYLVQIWLDKDNPQSTPETADAPFLINPQVF  72
            +++V+TGTRVIY A   E T++ SN      L+Q W+D  N ++ P+    PF + P + 
Sbjct  27   ASLVITGTRVIYNAGSPETTVKMSNEGQAPALMQAWIDDGNAEAKPDEVQVPFFLTPPLA  86

Query  73   RINPKRGQMVRMVYTG---DAILPADRESVFYLNFKQIPALEKNKLDQNMLVLLVKSRIK  129
            R++P +GQ +R+ + G      LP+DRESVF+LN  ++P     +    +L L ++SR+K
Sbjct  87   RVDPGKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATPEEGHGVLQLTIRSRLK  146

Query  130  VFYRPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATVKDN  181
            +FYRPK + G P  +   LT+   K +    LEV+NP+ YYV   +  V +N
Sbjct  147  LFYRPKGLSGNPLTAAADLTF---KRKPNGVLEVHNPTPYYVNLQKLEVGEN  195


 Score = 16.2 bits (30),  Expect = 8.9
 Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)

Query  167  SGYYVTATQATVKDNVLQAKAIDVGMIPPKST  198
            +GY    T  + +++V     ++V   PPK+T
Sbjct  101  NGYPDGKTLPSDRESVFWLNVLEV---PPKAT  129


>P33342 Probable fimbrial chaperone YehC [Escherichia coli (strain 
K12)]
Length=239

 Score = 109 bits (272),  Expect = 1e-32
 Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 24/226 (11%)

Query  12   HSNVVMTGTRVIYPAEQKEKTLQFSNNADQSYLVQIWLDKDNPQSTPETADAPFLINPQV  71
            H+ +V+ GTR+IYPAE KE  +Q  N  ++S L+Q W+D  +    PE    PF++ P V
Sbjct  32   HAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPV  91

Query  72   FRINPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPALEKNKLDQNMLVLLVKSRIKVF  131
             +I    GQ V++    +  LP ++ES+FYLN   IP     +  +N L   +++RIK+F
Sbjct  92   AKIGANSGQQVKIKIMPNK-LPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLF  150

Query  132  YRPKTIIGPPEDSFKTLTYS------LVKDQHLTWLEVNNPSGYYVTATQATVKDNVLQA  185
            YRP  I    + +FK L  +      ++K+    W+ +++     V     T+    L++
Sbjct  151  YRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVTISDVKANNVKVNYETIMIAPLES  210

Query  186  KAIDVGMIPPKSTARWKLDQSLVQEVGTEVTLRLVNDYGAYVNQLI  231
            ++++V      +   W               L +++D+G Y++  I
Sbjct  211  QSVNV---KSNNANNWH--------------LTIIDDHGNYISDKI  239


>P43661 Chaperone protein LpfB [Salmonella typhimurium (strain 
LT2 / SGSC1412 / ATCC 700720)]
Length=232

 Score = 105 bits (262),  Expect = 3e-31
 Identities = 65/219 (30%), Positives = 116/219 (53%), Gaps = 16/219 (7%)

Query  15   VVMTGTRVIYPAEQKEKTLQFSNNAD-QSYLVQIWLDKDNPQSTPETADAPFLINPQVFR  73
            V ++ TRVIY   +KE +L  +N +    +L+Q W+D  N          PF+I P +F+
Sbjct  26   VALSSTRVIYDGSRKEASLTVNNKSTTDEFLIQSWIDDANGNKK-----TPFIITPPLFK  80

Query  74   INPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPALEKNKLDQNMLVLLVKSRIKVFYR  133
            ++P +  ++R+V T +  LP DRESV+++N K IPA  ++   +N+L + V++R+K+FYR
Sbjct  81   LSPTKNNVLRIVNTTNT-LPQDRESVYWINVKAIPAKSEDAEAKNVLQIAVRTRLKLFYR  139

Query  134  PKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATVKDNVLQAKAIDVGMI  193
            P  + G   D +  L ++         ++V NPS + +T  +       ++      GM+
Sbjct  140  PAGLKGNSMDGWNKLQFT---SAGANQIKVENPSAFNLTFNKFYANGRDIE----KTGMV  192

Query  194  PPKSTARWKLDQSLVQEVGTEVTLRLVNDYGAYVNQLIQ  232
            P K +   +L     +   +EV   ++ND+G   + L Q
Sbjct  193  PAKGSLNIELPAGTGKV--SEVKYNIINDFGTAGDMLTQ  229


>Q8X5K6 Probable fimbrial chaperone LpfB [Escherichia coli O157:H7]
Length=232

 Score = 103 bits (256),  Expect = 2e-30
 Identities = 66/227 (29%), Positives = 122/227 (54%), Gaps = 21/227 (9%)

Query  7    STSIVHSNVVMTGTRVIYPAEQKEKTLQFSNNAD-QSYLVQIWLDKDNPQSTPETADAPF  65
            S S++   V ++ TRVIY   +KE +L   N +  + +L+Q W+D         +   PF
Sbjct  19   SQSVLAGGVGLSSTRVIYDGSKKEASLTVQNKSKTEEFLIQSWVD-----DAAGSKKTPF  73

Query  66   LINPQVFRINPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPALEKNKLDQNMLVLLVK  125
            +I P +F+++P++  ++R+V      LP DRESV+++N K IP+   +  ++N+L + V+
Sbjct  74   IITPPLFKLDPEKNNILRIVNITPG-LPQDRESVYWVNVKAIPSKSDDSENKNVLQIAVR  132

Query  126  SRIKVFYRPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATVKDNVLQA  185
            +RIK+FYRP  + G  + +   L ++   +Q    L V+NP+ + +T  Q    D  ++ 
Sbjct  133  TRIKLFYRPAGLKGDVKTAPNELRFTRNGNQ----LRVDNPTVFNITFNQFFANDKEIE-  187

Query  186  KAIDVGMIPPKSTARWKLDQSLVQEVG--TEVTLRLVNDYGAYVNQL  230
                 GM+P K      L+ +L   VG  +++    +ND+G+    +
Sbjct  188  ---KAGMVPAKGA----LNITLPAGVGSVSKIKYNTINDFGSXAEMI  227


>P40876 Uncharacterized fimbrial chaperone YcbF [Escherichia coli 
(strain K12)]
Length=236

 Score = 97.4 bits (241),  Expect = 4e-28
 Identities = 58/216 (27%), Positives = 117/216 (54%), Gaps = 16/216 (7%)

Query  11   VHSNVVMTGTRVIYPAEQKEKTLQFSNNADQSYLVQIWLDKDNPQSTPE--TADAPFLIN  68
            + + VV+ GTR I+PA+++  ++  +N + +S+L+   +++    +  E  T  AP L  
Sbjct  24   LQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAA  83

Query  69   PQVFRINPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPALEKNKLDQNMLVLLVKSRI  128
            P +  + P     +R++ T   ILP DRE++F L+   +P+    K++   + + ++S  
Sbjct  84   PPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPS---GKVENQSVKVAMRSVF  140

Query  129  KVFYRPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATVKDNVLQAKAI  188
            K+F+RP+ + G P ++++ L ++    ++   +++ NP+ YY+   Q +V    L     
Sbjct  141  KLFWRPEGLPGDPLEAYQQLRWT----RNSQGVQLTNPTPYYINLIQVSVNGKALS----  192

Query  189  DVGMIPPKSTARWKLDQSLVQEVGTEVTLRLVNDYG  224
            +VG++PPKS  +    Q++       V  R +NDYG
Sbjct  193  NVGVVPPKSQRQTSWCQAIAP---CHVAWRAINDYG  225


>Q8X5E4 Probable fimbrial chaperone protein ElfD [Escherichia 
coli O157:H7]
Length=233

 Score = 90.1 bits (222),  Expect = 2e-25
 Identities = 67/232 (29%), Positives = 118/232 (51%), Gaps = 22/232 (9%)

Query  1    MMYCMGSTSIVHSNVVMTGTRVIYPAEQKEKTLQFSNNA-DQSYLVQIW-LDKDNPQSTP  58
            ++ C  + +     V +  TR++Y   +++ +L   N + D  YL+Q W +  DN +S  
Sbjct  18   LLSCSSTWAAGKGGVGLAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMTPDNKKS--  75

Query  59   ETADAPFLINPQVFRINPKRGQMVRMVYTGDAILPADRESVFYLNFKQIPALEKNKLDQN  118
                A F+I P +F +NP    ++R++Y G A L  DRE++F+ + + +P+  K + + N
Sbjct  76   ----ADFIITPPLFVLNPANENLLRIMYIG-APLAKDRETLFFTSVRAVPSTTKRE-EGN  129

Query  119  MLVLLVKSRIKVFYRPKTIIGPPEDSFKTLTYSLVKDQHLTWLEVNNPSGYYVTATQATV  178
             L +  +S IK+F+RPK +  P  ++   L  +   D     + V+NP+ Y++T T    
Sbjct  130  TLKIATQSVIKLFWRPKGLAYPLGEAPAKLRCTSSADM----VTVSNPTPYFITLT----  181

Query  179  KDNVLQAKAIDVGMIPPKSTARWKLDQSLVQEVGTEVTLRLVNDYGAYVNQL  230
             D  +  K +   MI P    ++ L +       + VT R +NDYGA   QL
Sbjct  182  -DLKIGGKLVKNQMISPFDKYQFSLPKG---AKNSSVTYRTINDYGAETPQL  229



Lambda      K        H        a         alpha
   0.320    0.134    0.393    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 579744


  Database: 3450075308d65d74faf0a4ecba16c7ae.SwissProt.fasta
    Posted date:  May 30, 2024  9:45 PM
  Number of letters in database: 3,543
  Number of sequences in database:  15



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40