BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: dff14d18e7c0108becc1c2073581be71.SwissProt.fasta
14 sequences; 11,953 total letters
Query= ACIAD0121
Length=870
Score E
Sequences producing significant alignments: (Bits) Value
P75857 Probable outer membrane usher protein ElfC [Escherichia co... 390 3e-125
Q8XDD1 Probable outer membrane usher protein ElfC [Escherichia co... 385 3e-123
P37924 Outer membrane usher protein FimD [Salmonella typhimurium ... 378 9e-121
P33397 Outer membrane usher protein HifC [Haemophilus influenzae] 374 2e-119
P45997 Outer membrane usher protein HifC [Haemophilus influenzae] 372 9e-119
P42915 Outer membrane usher protein YraJ [Escherichia coli (strai... 370 5e-118
P45998 Outer membrane usher protein HifC [Haemophilus influenzae] 369 2e-117
P43662 Outer membrane usher protein LpfC [Salmonella typhimurium ... 359 6e-114
P30130 Outer membrane usher protein FimD [Escherichia coli (strai... 358 4e-113
P21647 Outer membrane usher protein MrkC [Klebsiella pneumoniae] 356 9e-113
P33410 Outer membrane usher protein FimC [Bordetella pertussis (s... 354 9e-112
P33129 Outer membrane usher protein HtrE [Escherichia coli (strai... 338 1e-105
P46009 Outer membrane usher protein FocD [Escherichia coli] 335 1e-104
P33408 Outer membrane usher protein MyfC [Yersinia enterocolitica] 310 1e-95
>P75857 Probable outer membrane usher protein ElfC [Escherichia
coli (strain K12)]
Length=866
Score = 390 bits (1002), Expect = 3e-125
Identities = 255/849 (30%), Positives = 419/849 (49%), Gaps = 52/849 (6%)
Query 46 FDPHLFKGTGLNQELIERFNHSSQLQAGQYTLDVYVNKRFIDRQQIKLVDGSEQANTIDA 105
FDP FK + RF ++ G Y +D+ +N+ +D + + V+ + + I A
Sbjct 39 FDPAFFKDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKG-IAA 97
Query 106 CWTTSLLERAGILGSPDFQKTRAEATHQILADECLKLDQIAPGSQSDFDFSNLRLDLSIP 165
C TT L+ G+ A Q+ C+ L +I P + F+ + LRL++S+P
Sbjct 98 CLTTESLDAMGV------NTDAFPAFKQLDKQACVPLAEIIPDASVTFNVNKLRLEISVP 151
Query 166 QQFLKNLPRGYVSSEELDAGESIGFVNYSGNYYRTESKFEHKQRHESGFVSLNAGVNAGK 225
Q +K+ RGYV E D G + + YS + + +S F++LN+GVN G
Sbjct 152 QIAIKSNARGYVPPERWDEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGP 211
Query 226 WQYRQQSNFSIDNDSHRHWNHIRSYLQRPIDSWASVLTLGQQYGSGQFFSTLPYLGLSIQ 285
W+ R S +S + W ++ SYLQR + LT+G Y +G FF ++ + G+ +
Sbjct 212 WRLRNNSTWSRSSGQTAEWKNLSSYLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLA 271
Query 286 TDERMRPDSMRGYAPVIRGTAQTNAKVSIEQNGREIYQISVAPGPFEIKDLYPTNFEGNL 345
+D+ M PDS++G+APV+RG A++NA+++I+QNG IYQ V+PG FEI DLY T+ G+L
Sbjct 272 SDDNMLPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDL 331
Query 346 KVVVTEADGTVHTHDVPYAAVPNSLRAGLYNYNFSLG--RTDLDRAQDAYFSDFNYEYGL 403
V + EADG+V+++ VP+++VP R G Y +L RT+ + Q++ F+ ++G
Sbjct 332 LVEIKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGG 391
Query 404 SNSITLNGGVRLSQNYQAALFG-GVWGSSLGALGTNVTYSRAELANLSGKDTTDGWMANI 462
T GG + ++ Y+AA+FG G GA+ + T +++ LA+ S G
Sbjct 392 PWGTTWYGGGQYAEYYRAAMFGLGFNLGDFGAISFDATQAKSTLADQS---EHKGQSYRF 448
Query 463 TYSKTIQSTNTTIAIAGYRYSTEGYRELNDVLGL---AYAAKQGGD-----WS---SNTY 511
Y+KT+ T + GYRYST G+ L+D + Y G D WS + Y
Sbjct 449 LYAKTLNHLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDEDTPMWSRYYNLFY 508
Query 512 LQRSRFQINLSQQFGRFGSFYVAGSTQSYRDERKRDTAFQAGFSKSIGIMSFNLNYTRQK 571
+R + Q+N+SQQ G +GSFY++GS Q+Y ++D Q G++ I +S +++ K
Sbjct 509 TKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLGISWNYSK 568
Query 572 VYSMRDDSLKHEYSDNFGGISVHIPLGKARNPLRPTLSAYYNQSKN-----------NEN 620
D +D ++ +PL N L P + Y + KN NE
Sbjct 569 SRGQPD-------ADQVFALNFSLPL----NLLLPRSNDSYTRKKNYAWMTSNTSIDNEG 617
Query 621 Y---QLALNGAL--DPNYSLNYTLGVNGSSDQTDTTYTAGLYKRFASLQLGANTSYGNQY 675
+ L L L D N S + G N + + + FA ++G N S
Sbjct 618 HTTQNLGLTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKGAFADARVGYNYSDNGSQ 677
Query 676 WQNSMSANGAVALHSGGVTFGPYLTETFGLIEAKGAKGAKVISSPYSKIDRFGYALVPSL 735
Q + + +G++ HS G+T G L ET LI A GA+ +V +S K D GY +VP
Sbjct 678 QQLNYALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRGYTVVPYA 737
Query 736 SPYRYNSVILDPQGIANNIELEGGEQRVAPYAGASVKIKFVTRTGYSVLIQSRLNNQHMI 795
+ YR N + LD + N++LE V P GA V +F G VL+++ +
Sbjct 738 TSYRENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGIPLR 797
Query 796 PMGTDVLNANEEVIGMVGQGGQMYLRVAQPKGILHLRWTDQQGASSCSLPYAISDIELNQ 855
L+ + G++ G +Y+ KG + +RW + C + Y +++ ++N
Sbjct 798 FGAIATLDGVQANSGIIDDDGSLYMAGLPAKGTISVRWGEAPD-QICHINYELTEQQINS 856
Query 856 PLIKLSAVC 864
+ ++ A+C
Sbjct 857 AITRMDAIC 865
>Q8XDD1 Probable outer membrane usher protein ElfC [Escherichia
coli O157:H7]
Length=866
Score = 385 bits (988), Expect = 3e-123
Identities = 253/845 (30%), Positives = 418/845 (49%), Gaps = 44/845 (5%)
Query 46 FDPHLFKGTGLNQELIERFNHSSQLQAGQYTLDVYVNKRFIDRQQIKLVDGSEQANTIDA 105
FDP FK + RF ++ G Y +D+ +N+ +D + + V+ + + I A
Sbjct 39 FDPAFFKDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKG-IAA 97
Query 106 CWTTSLLERAGILGSPDFQKTRAEATHQILADECLKLDQIAPGSQSDFDFSNLRLDLSIP 165
C TT L+ G+ A Q+ C L +I P + F+ + LRL++S+P
Sbjct 98 CLTTESLDAMGV------NTDAFPAFKQLDKQACAPLAEIIPDASVTFNVNKLRLEISVP 151
Query 166 QQFLKNLPRGYVSSEELDAGESIGFVNYSGNYYRTESKFEHKQRHESGFVSLNAGVNAGK 225
Q +K+ RGYV E D G + + YS + + +S F++LN+GVN G
Sbjct 152 QIAIKSNARGYVPPERWDEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGP 211
Query 226 WQYRQQSNFSIDNDSHRHWNHIRSYLQRPIDSWASVLTLGQQYGSGQFFSTLPYLGLSIQ 285
W+ R S +S + W ++ SYLQR + LT+G Y +G FF ++ + G+ +
Sbjct 212 WRLRNNSTWSRSSGQTAEWKNLSSYLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLA 271
Query 286 TDERMRPDSMRGYAPVIRGTAQTNAKVSIEQNGREIYQISVAPGPFEIKDLYPTNFEGNL 345
+D+ M PDS++G+APV+RG A++NA+++I+QNG IYQ V+PG FEI D+Y T+ G+L
Sbjct 272 SDDNMLPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDIYSTSSSGDL 331
Query 346 KVVVTEADGTVHTHDVPYAAVPNSLRAGLYNYNFSLG--RTDLDRAQDAYFSDFNYEYGL 403
V + EADG+V+++ VP+++VP R G Y +L RT+ + Q++ F+ ++G
Sbjct 332 LVEIKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGG 391
Query 404 SNSITLNGGVRLSQNYQAALFG-GVWGSSLGALGTNVTYSRAELANLSGKDTTDGWMANI 462
T GG + ++ Y+AA+FG G GA+ +VT +++ LA+ S G
Sbjct 392 PWGTTWYGGGQYAEYYRAAMFGLGFNLGDFGAISFDVTQAKSTLADQS---EHKGQSYRF 448
Query 463 TYSKTIQSTNTTIAIAGYRYSTEGYRELNDVLGL---AYAAKQGGD-----WS---SNTY 511
Y+KT+ T + GYRYST G+ L+D + Y G D WS + Y
Sbjct 449 LYAKTLNQLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDEDTPMWSRYYNLFY 508
Query 512 LQRSRFQINLSQQFGRFGSFYVAGSTQSYRDERKRDTAFQAGFSKSIGIMSFNLNYTRQK 571
+R + Q+N+SQQ +GSFY++GS Q+Y ++D Q G++ I +S +++ K
Sbjct 509 TKRGKLQVNISQQLSEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLGISWNYSK 568
Query 572 VYSMRDDSLKHEYSDNFGGISVHIPLG--KARNPLRPTLSAYY-----NQSKNNENY--- 621
D +D ++ +PL +R+ T Y N S +NE +
Sbjct 569 SRGQPD-------ADQVFALNFSLPLNLLLSRSNDSYTSKKNYAWMTSNTSIDNEGHTTQ 621
Query 622 QLALNGAL--DPNYSLNYTLGVNGSSDQTDTTYTAGLYKRFASLQLGANTSYGNQYWQNS 679
L L L D N S + G N + + + FA ++G N S Q +
Sbjct 622 NLGLTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKGVFADARVGYNYSDNGSQQQLN 681
Query 680 MSANGAVALHSGGVTFGPYLTETFGLIEAKGAKGAKVISSPYSKIDRFGYALVPSLSPYR 739
+ +G++ HS G+T G L ET LI A GA+ +V +S K D GY +VP + YR
Sbjct 682 YALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRGYTVVPYATSYR 741
Query 740 YNSVILDPQGIANNIELEGGEQRVAPYAGASVKIKFVTRTGYSVLIQSRLNNQHMIPMGT 799
N + LD + N++LE V P GA V +F G VL+++ +
Sbjct 742 ENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGISLRFGAI 801
Query 800 DVLNANEEVIGMVGQGGQMYLRVAQPKGILHLRWTDQQGASSCSLPYAISDIELNQPLIK 859
L+ + G++ G +Y+ KG + +RW + C + Y +++ ++N + +
Sbjct 802 ATLDGVQTNSGIIDDDGSLYMAGLPAKGTITVRWGEAPD-QICHISYELTEQQINSAITR 860
Query 860 LSAVC 864
+ A+C
Sbjct 861 MDAIC 865
>P37924 Outer membrane usher protein FimD [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=870
Score = 378 bits (971), Expect = 9e-121
Identities = 261/868 (30%), Positives = 429/868 (49%), Gaps = 76/868 (9%)
Query 38 TSASEAYTFDPHLFKGTGLNQELIERFNHSSQLQAGQYTLDVYVNKRFIDRQQIKLVDGS 97
TS E+Y F+P + + RF + G Y +D++ N F+ Q I+ G+
Sbjct 33 TSRGESY-FNPAFLSADTASVADLSRFEKGNHQPPGIYRVDIWRNDEFVATQDIRFEAGA 91
Query 98 ----EQANTIDACWTTSLLERAGILGSPDFQKTRAEATHQILADECLKLDQIAPGSQSDF 153
+++ + C+T ++R G+ + + + C+ L + PG++ F
Sbjct 92 VGTGDKSGGLMPCFTPEWIKRLGV------NTAAFPVSDKGVDTTCIHLPEKIPGAEVAF 145
Query 154 DFSNLRLDLSIPQQFLKNLPRGYVSSEELDAGESIGFVNYSGNYYR-TESKFEHKQRHES 212
DF+++RL++S+PQ L N RGY+ EE D G +NYS R T+S +S
Sbjct 146 DFASMRLNISLPQASLLNSARGYIPPEEWDEGIPAALINYSFTGSRGTDS--------DS 197
Query 213 GFVSLNAGVNAGKWQYRQQS--NFSIDNDSH-RHWNHIRSYLQRPIDSWASVLTLGQQYG 269
F+SL +G+N G W+ R N+S + H + WN+I +++QR I S L +G
Sbjct 198 YFLSLLSGLNYGPWRLRNNGAWNYSKGDGYHSQRWNNIGTWVQRAIIPLKSELVMGDSNT 257
Query 270 SGQFFSTLPYLGLSIQTDERMRPDSMRGYAPVIRGTAQTNAKVSIEQNGREIYQISVAPG 329
F ++ + G + + + M PDS++GYAP +RG A+T AK++I QNG IYQ V+PG
Sbjct 258 GNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVSPG 317
Query 330 PFEIKDLYPTNFEGNLKVVVTEADGTVHTHDVPYAAVPNSLRAGLYNYNFSLG--RTDLD 387
F I DL PT+ G+L+V V E DG+ + VPY+ VP R G Y+ G R+
Sbjct 318 AFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPLLQREGRVKYDLVAGDFRSGNS 377
Query 388 RAQDAYFSDFNYEYGLSNSITLNGGVRLSQNYQAALFG-----GVWGSSLGALGTNVTYS 442
+ +F GL +T GG +L+ Y+A + G G W GA+ +VT++
Sbjct 378 QQSSPFFFQGTVIAGLPAGLTAYGGTQLADRYRAVVVGAGRNLGDW----GAVSVDVTHA 433
Query 443 RAELANLSGKDTTDGWMANITYSKTIQSTNTTIAIAGYRYSTEGYRELNDVLGLAYAAKQ 502
R++LA+ S T G Y+K++ + T + GYRYST G+ L+DV AY + +
Sbjct 434 RSQLADDS---THQGQSLRFLYAKSLNNYGTNFQLLGYRYSTRGFYTLDDV---AYRSME 487
Query 503 GGDWSSNT-----------------YLQRSRFQINLSQQFGRFGSFYVAGSTQSYRDERK 545
G D+ ++ Y ++ RFQ+N+SQ G +GS Y++GS Q+Y +
Sbjct 488 GYDYEYDSDGRRHKVPVAQSYHNLRYSKKGRFQVNISQNLGDYGSLYLSGSQQNYWNTAD 547
Query 546 RDTAFQAGFSKSIGIMSFNLNYTRQKVYSMRDDSLKHEYSDNFGGISVHIPLG------K 599
+T +Q G++ +S++L+++ +S+ +D ++ +P
Sbjct 548 TNTWYQLGYASGWQGISYSLSWS-------WSESVGSSGADRILAFNMSVPFSVLTGRRY 600
Query 600 ARNPLRPTLSAYYNQSKNNE---NYQLALNGALDPNYSLNYTLGVNGSSDQTDTTYTAGL 656
AR+ + A +N ++N + ++Q + G L +L+Y++ G S + +A
Sbjct 601 ARDTILDRTYATFNANRNRDGDNSWQTGVGGTLLEGRNLSYSV-TQGRSSSNGYSGSASA 659
Query 657 YKRFASLQLGANTSYGNQYWQNSMSANGAVALHSGGVTFGPYLTETFGLIEAKGAKGAKV 716
+ LG +Y + +G V H+ G+TF L +T LI+A GAKG ++
Sbjct 660 SWQATYGTLGVGYNYDRDQHDYNWQLSGGVVGHADGITFSQPLGDTNVLIKAPGAKGVRI 719
Query 717 ISSPYSKIDRFGYALVPSLSPYRYNSVILDPQGIANNIELEGGEQRVAPYAGASVKIKFV 776
+ K D GYA++P + YRYN V LD + N+ ++E V P GA V+ F
Sbjct 720 ENQTGVKTDWRGYAVMPYATVYRYNRVALDTNTMDNHTDVENNVSSVVPTEGALVRAAFD 779
Query 777 TRTGYSVLIQSRLNNQHMIPMGTDVLNANEEVIGMVGQGGQMYLRVAQPKGILHLRWTDQ 836
TR G +I +RL + +P G V + MVG GQ+YL KG L ++W +
Sbjct 780 TRIGVRAIITARLGGR-PLPFGAIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEG 838
Query 837 QGASSCSLPYAISDIELNQPLIKLSAVC 864
+ A C PYA+++ L Q + SA C
Sbjct 839 KNA-RCIAPYALAEDSLKQAITIASATC 865
>P33397 Outer membrane usher protein HifC [Haemophilus influenzae]
Length=837
Score = 374 bits (960), Expect = 2e-119
Identities = 250/822 (30%), Positives = 405/822 (49%), Gaps = 51/822 (6%)
Query 46 FDPHLFKGTGLNQELIERFNHSSQLQAGQYTLDVYVNKRFIDRQQIKLVDGSEQANTIDA 105
FD L+ G + RFN + + G+Y +YVN I D +
Sbjct 30 FDASLWGGGSVLGIDFARFNVKNAVLPGRYEAQIYVNNEEKGESDIIFADNPATGRA-EL 88
Query 106 CWTTSLLERAGILGSPDFQKTRAEATHQILADECLKLDQIAPGSQSDFDFSNLRLDLSIP 165
C+T L E ++ + +E D C+ P D+ +++L L IP
Sbjct 89 CFTPKLQEMLDLMDEAIVKSPNSED------DTCVFASDAIPKGTFDYQGGDMKLKLEIP 142
Query 166 QQFLKNLPRGYVSSEELDAGESIGFVNYSGNYYRTESKFEHKQRHESGFVSLNAGVNAGK 225
Q PRGY++ G + F NY NYYR+ + + + ES +V L GVN G
Sbjct 143 QALTIRRPRGYIAPSRWQTGTNAAFANYDINYYRSGNP---EVKSESLYVGLRGGVNFGN 199
Query 226 WQYRQQSNFS-IDNDSH--------RHWNHIRSYLQRPIDSWASVLTLGQQYGSGQFFST 276
W R +FS +N S H+ +YLQR +T+G + + +
Sbjct 200 WALRHNGSFSRFENQSSSGFTDKGKNHYERGDTYLQRDFALLRGNVTVGDFFSTARIGEN 259
Query 277 LPYLGLSIQTDERMRPDSMRGYAPVIRGTAQTNAKVSIEQNGREIYQISVAPGPFEIKDL 336
GL I +D+RM S RG+APV+RG A TNAKVSI+QNG IYQI+V GPF I DL
Sbjct 260 FGLRGLRIASDDRMLAPSQRGFAPVVRGVANTNAKVSIKQNGYTIYQITVPAGPFVINDL 319
Query 337 YPTNFEGNLKVVVTEADGTVHTHDVPYAAVPNSLRAGLYNYNFSLGRTDLD-RAQDAYFS 395
Y + + G+L V + E+DG V + VP++ + +R G Y + GR +D R D
Sbjct 320 YASGYSGDLTVEIQESDGKVRSFIVPFSNLAPLMRVGHLRYQLAGGRYRIDSRTFDERVL 379
Query 396 DFNYEYGLSNSITLNGGVRLSQNYQAALFGGVWGSSLGALGTNVTYSRAELANLSGKDTT 455
+YGL+N +TLN + +++Y+A LFG + +GA + T+S AE K +
Sbjct 380 QGVLQYGLTNHLTLNSSLLYTRHYRAGLFGFGLNTPIGAFSADATWSHAEFP--LKKVSK 437
Query 456 DGWMANITYSKTIQSTNTTIAIAGYRYSTEGYRELNDVLGLAYAAKQ-GGDWSSNTYLQR 514
+G+ + +YS T + +A YRYS+ + L+D +GL +Q G + Y +
Sbjct 438 NGYSLHGSYSINFNEIGTNLTLAAYRYSSRDFYTLSDTIGLNRTFRQFSGAYLPEIYRPK 497
Query 515 SRFQINLSQQFGRFGSFYVAGSTQSYRDERKRDTAFQAGFSKSIGIMSFNLNYTR--QKV 572
++FQ++LSQ G +G+ Y++G T +Y ++R +T +Q +S S I+++++N ++ K
Sbjct 498 NQFQVSLSQSLGNWGNLYLSGQTYNYWEKRGTNTQYQVAYSNSFHILNYSVNLSQSIDKE 557
Query 573 YSMRDDSLKHEYSDNFGGISVHIPLGKARNPLRPTLSAYYNQSKNNENYQLALNGALDPN 632
RD+S+ +S+ +PLG + + Y++S N+ N +L +NG+
Sbjct 558 TGKRDNSIY---------LSLSLPLGD-----NHSADSSYSRSGNDINQRLGVNGSFGER 603
Query 633 YSLNYTLGVNGS-SDQTDTTYTAGLYKRFASLQLGA-NTSYGNQYWQN---SMSANGAVA 687
+ +Y G+N S ++Q +Y L + +G+ SY +N S+ +GAV
Sbjct 604 HQWSY--GINASRNNQGYRSYDGNLSH---NNSIGSYRASYSRDSLKNRSTSLGVSGAVV 658
Query 688 LHSGGVTFGPYLTETFGLIEAKGAKGAKVISSPYSKIDRFGYALVPSLSPYRYNSVILDP 747
H G+T + E+F +I AK A GAKV S +D FG A+VP SPY N + ++P
Sbjct 659 AHKYGITLSQPVGESFAIIHAKDAAGAKVESGANVSLDYFGNAVVPYTSPYEINYIGINP 718
Query 748 QGIANNIELEGGEQRVAPYAGASVKIKFVTRTGYSVLIQSRLNNQHMIPMGTDVLNANEE 807
N+E E E+++ P A + + F T VL L N +PM + ++
Sbjct 719 SDAEANVEFEATERQIIPRANSISLVDFRTGKNTMVLFNLTLPNGEPVPMASTAQDSEGA 778
Query 808 VIGMVGQGGQMYL-RVAQPKGILHLRWTDQQGASSCSLPYAI 848
+G V QGG ++ ++ QPKG L ++W +++ + C Y +
Sbjct 779 FVGDVVQGGVLFANKLTQPKGELIVKWGERE-SEQCRFHYQV 819
>P45997 Outer membrane usher protein HifC [Haemophilus influenzae]
Length=837
Score = 372 bits (955), Expect = 9e-119
Identities = 249/822 (30%), Positives = 407/822 (50%), Gaps = 51/822 (6%)
Query 46 FDPHLFKGTGLNQELIERFNHSSQLQAGQYTLDVYVNKRFIDRQQIKLVDGSEQANTIDA 105
FD L+ G + RFN + + G+Y +YVN I D +
Sbjct 30 FDASLWGGGSVLGIDFARFNVKNAVLPGRYEAQIYVNNEEKGESDIIFADNPATGRA-EL 88
Query 106 CWTTSLLERAGILGSPDFQKTRAEATHQILADECLKLDQIAPGSQSDFDFSNLRLDLSIP 165
C+T L E ++ + AE D C+ + P D+ +++L L +P
Sbjct 89 CFTPKLQEMLDLMDEAIVKSPNAED------DTCVFASEAIPKGTFDYQGGDMKLKLELP 142
Query 166 QQFLKNLPRGYVSSEELDAGESIGFVNYSGNYYRTESKFEHKQRHESGFVSLNAGVNAGK 225
Q PRGY++ G + NY NYYR+ + + + +S +V L GVN G
Sbjct 143 QALTIRRPRGYIAPSRWQTGTNAASANYDINYYRSGNP---EVKSKSLYVGLRGGVNLGN 199
Query 226 WQYRQQSNFS-IDNDSH--------RHWNHIRSYLQRPIDSWASVLTLGQQYGSGQFFST 276
W R +FS +N S H+ +YLQR +T+G + + + +
Sbjct 200 WALRHNGSFSRFENHSSSGFTDKGKNHYERGDTYLQRDFALLRGNVTVGDFFSTARIGES 259
Query 277 LPYLGLSIQTDERMRPDSMRGYAPVIRGTAQTNAKVSIEQNGREIYQISVAPGPFEIKDL 336
GL I +D+RM S RG+APV+RG A TNAKVSI+QNG IYQI+V GPF I DL
Sbjct 260 FGLRGLRIASDDRMLAPSQRGFAPVVRGVANTNAKVSIKQNGYTIYQITVPAGPFVINDL 319
Query 337 YPTNFEGNLKVVVTEADGTVHTHDVPYAAVPNSLRAGLYNYNFSLGRTDLD-RAQDAYFS 395
Y + + G+L V + E+DG V + VP++ + +R G Y + GR +D R D
Sbjct 320 YASGYSGDLTVEIQESDGKVRSFIVPFSNLAPLMRVGHLRYQLAGGRYRIDSRTFDERVL 379
Query 396 DFNYEYGLSNSITLNGGVRLSQNYQAALFGGVWGSSLGALGTNVTYSRAELANLSGKDTT 455
+YGL+N +TLN + +++Y+A LFG + +GA + T+S AE K +
Sbjct 380 QGVLQYGLTNHLTLNSSLLYTRHYRAGLFGFGLNTPIGAFSADATWSHAEFP--LKKVSK 437
Query 456 DGWMANITYSKTIQSTNTTIAIAGYRYSTEGYRELNDVLGLAYAAKQ-GGDWSSNTYLQR 514
+G+ + +YS T + +A YRYS+ + L+D +GL KQ G + Y +
Sbjct 438 NGYSLHGSYSINFNEIGTNLTLAAYRYSSRDFYTLSDTIGLNRTFKQFSGAYLPEIYRPK 497
Query 515 SRFQINLSQQFGRFGSFYVAGSTQSYRDERKRDTAFQAGFSKSIGIMSFNLNYTR--QKV 572
++FQ++LSQ G +G+ Y++G T +Y ++R +T +Q ++ I+++++N ++ K
Sbjct 498 NQFQVSLSQSLGNWGNLYLSGQTYNYWEKRGTNTQYQLAYANRFHILNYSINLSQSIDKE 557
Query 573 YSMRDDSLKHEYSDNFGGISVHIPLGKARNPLRPTLSAYYNQSKNNENYQLALNGALDPN 632
RD+S+ +S+ +PLG + + Y++S N+ N +L +NG+
Sbjct 558 TGKRDNSIY---------LSLSLPLGD-----NHSADSSYSRSGNDINQRLGVNGSFGER 603
Query 633 YSLNYTLGVNGS-SDQTDTTYTAGLYKRFASLQLGA-NTSYGNQYWQN---SMSANGAVA 687
+ +Y G+N S ++Q +Y A L + +G+ SY +N S+ A+GAV
Sbjct 604 HQWSY--GINASRNNQGYRSYDANLAH---NNSIGSYRASYSRDSLKNRSTSLGASGAVV 658
Query 688 LHSGGVTFGPYLTETFGLIEAKGAKGAKVISSPYSKIDRFGYALVPSLSPYRYNSVILDP 747
H G+T + E+F +I AK A GAKV S +D FG A+VP SPY N + ++P
Sbjct 659 AHKYGITLSQPVGESFAIIHAKDAAGAKVESGANVSLDYFGNAVVPYTSPYEINYIGINP 718
Query 748 QGIANNIELEGGEQRVAPYAGASVKIKFVTRTGYSVLIQSRLNNQHMIPMGTDVLNANEE 807
N+E E E+++ P A + + F T VL L N +PM + ++
Sbjct 719 SDAEANVEFEATERQIIPRANSISLVDFRTGKNTMVLFNLTLPNGEPVPMASTAQDSEGA 778
Query 808 VIGMVGQGGQMYL-RVAQPKGILHLRWTDQQGASSCSLPYAI 848
+G V QGG ++ ++ QPKG L ++W +++ + C Y +
Sbjct 779 FVGDVVQGGVLFANKLTQPKGELIVKWGERE-SEQCRFHYQV 819
>P42915 Outer membrane usher protein YraJ [Escherichia coli (strain
K12)]
Length=838
Score = 370 bits (950), Expect = 5e-118
Identities = 262/835 (31%), Positives = 413/835 (49%), Gaps = 40/835 (5%)
Query 37 STSASEAYTFDPHLFKGT--GLNQELIERFNHSSQLQAGQYTLDVYVNKRFIDRQQIKLV 94
+T+ +E Y FDP + + T G+ + RF+ G Y +D+++NK+ + +++I
Sbjct 36 TTANAEEYYFDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFT 95
Query 95 DGSEQANTIDACWTTSLLERAGILGSPDFQKTRAEATHQILADECLKLDQIAPGSQSDFD 154
+EQ + +T L GI D AE + + L+QI PG+ ++FD
Sbjct 96 ANAEQL--LQPQFTVEQLRELGI--KVDEIPALAEKDDDSVINS---LEQIIPGTAAEFD 148
Query 155 FSNLRLDLSIPQQFLKNLPRGYVSSEELDAGESIGFVNYSGNYYRTESKFEHKQRHESGF 214
F++ +L+LSIPQ L RGYVS D G F NYS + +++++ R + +
Sbjct 149 FNHQQLNLSIPQIALYRDARGYVSPSRWDDGIPTLFTNYS--FTGSDNRYRQGNRSQRQY 206
Query 215 VSLNAGVNAGKWQYRQQSNFSIDNDSHRHWNHIRSYLQRPIDSWASVLTLGQQYGSGQFF 274
+++ G N G W+ R S ++ ND WN I SYLQR I + S L LG+ SG F
Sbjct 207 LNMQNGANFGPWRLRNYSTWT-RNDQTSSWNTISSYLQRDIKALKSQLLLGESATSGSIF 265
Query 275 STLPYLGLSIQTDERMRPDSMRGYAPVIRGTAQTNAKVSIEQNGREIYQISVAPGPFEIK 334
S+ + G+ + +D+ M P+S RG+AP +RG A ++A V+I QNG IYQ +V+ G FEI
Sbjct 266 SSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVSAGAFEIN 325
Query 335 DLYPTNFEGNLKVVVTEADGTVHTHDVPYAAVPNSLRAGLYNYNFSLGRTDLDRAQDA-- 392
DLYP++ G+L+V + E+DGT PY+++P R G Y+ + GR D D+
Sbjct 326 DLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKE 385
Query 393 -YFSDFNYEYGLSNSITLNGGVRLSQNYQAALFGGVWGSSLGALGT-NVTYSRAELANLS 450
F++ YGL+N+ TL GG+ S++Y A G G +LGALG ++ +RA+
Sbjct 386 PEFAEATAIYGLNNTFTLYGGLLGSEDYYALGIG--IGGTLGALGALSMDINRAD-TQFD 442
Query 451 GKDTTDGWMANITYSKTIQSTNTTIAIAGYRYSTEGYRELNDVLGLAYAAKQGGDWSSNT 510
+ + G+ Y K I TNT IA++ YRY+ +GY N+ A + D++S
Sbjct 443 NQHSFHGYQWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFNE------ANTRNWDYNSR- 495
Query 511 YLQRSRFQINLSQQFGRFGSFYVAGSTQSYRDERKRDTAFQAGFSKSIGIMSFNLNYTRQ 570
Q+S Q N+SQ S Y +GS Q Y ++ G S + ++LNY
Sbjct 496 --QKSEIQFNISQTIFDGVSLYASGSQQDYWGNNDKNRNISVGVSGQQWGVGYSLNYQ-- 551
Query 571 KVYSMRDDSLKHEYSDNFGGISVHIPLGKARNPLRPTLSAYYNQSKNNENYQLALNGALD 630
YS D + +D +++ IPL + P +Q +++ L+G+L
Sbjct 552 --YSRYTD----QNNDRALSLNLSIPLERWL-PRSRVSYQMTSQKDRPTQHEMRLDGSLL 604
Query 631 PNYSLNYTLGVNGSSDQTDTTYTAGLYKRFASLQLGANTSYGNQYWQNSMSANGAVALHS 690
+ L+Y+L + D + Y R A SYGN Q + G V +H
Sbjct 605 DDGRLSYSLEQSLDDDNNHNSSLNASY-RSPYGTFSAGYSYGNDSSQYNYGVTGGVVIHP 663
Query 691 GGVTFGPYLTETFGLIEAKGAKGAKVISSPYSKIDRFGYALVPSLSPYRYNSVILDPQGI 750
GVT YL F LI+A GA G ++ + P D FGYA+VP L+ Y+ N + +D +
Sbjct 664 HGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLSVDTTQL 723
Query 751 ANNIELEGGEQRVAPYAGASVKIKFVTRTGYSVLIQSRLNNQHMIPMGTDVLNANEEVIG 810
+N++LE Q V P GA V +F GY VL+ N +P G N +
Sbjct 724 PDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDDTGQQS 783
Query 811 MVGQGGQMYLR-VAQPKGILHLRWTDQQGASSCSLPYAISDIELNQPLIKLSAVC 864
+V +GG +YL ++ +RW Q C ++ D E +++ +A C
Sbjct 784 IVDEGGILYLSGISSKSQSWTVRW-GNQADQQCQFAFSTPDSEPTTSVLQGTAQC 837
>P45998 Outer membrane usher protein HifC [Haemophilus influenzae]
Length=837
Score = 369 bits (946), Expect = 2e-117
Identities = 246/807 (30%), Positives = 403/807 (50%), Gaps = 55/807 (7%)
Query 63 RFNHSSQLQAGQYTLDVYVNKRFIDRQQIKLVDGSEQANTIDACWTTSLLERAGILGSPD 122
RFN + + G+Y +YV I D T + C+T L E ++
Sbjct 47 RFNVKNAVLPGRYEAQIYVKFEEKGVSDIIFADNPATGRT-ELCFTPKLQEMLDLMDEAI 105
Query 123 FQKTRAEATHQILADECLKLDQIAPGSQSDFDFSNLRLDLSIPQQFLKNLPRGYVSSEEL 182
+ +E D C+ P ++ ++L L +PQ PRGY++
Sbjct 106 VKSPNSED------DTCVFASDAIPKGTFEYQSGEMKLKLELPQALTIRRPRGYIAPSRW 159
Query 183 DAGESIGFVNYSGNYYRTESKFEHKQRHESGFVSLNAGVNAGKWQYRQQSNFS-IDNDSH 241
G + F NY NYYR+ + + + ES +V L +GVN G W R +FS +N S
Sbjct 160 QTGTNAAFANYDINYYRSGNP---EVKSESLYVGLRSGVNFGNWALRHSGSFSRFENQSS 216
Query 242 --------RHWNHIRSYLQRPIDSWASVLTLGQQYGSGQFFSTLPYLGLSIQTDERMRPD 293
H+ +YLQR +T+G + + + GL I +D+RM
Sbjct 217 SGFTDKGKNHYERGDTYLQRDFALLRGNVTVGDFFSTARIGENFGMRGLRIASDDRMLAP 276
Query 294 SMRGYAPVIRGTAQTNAKVSIEQNGREIYQISVAPGPFEIKDLYPTNFEGNLKVVVTEAD 353
S RG+APV+RG A TNAKVSI+QNG IYQI+V GPF I DLY + + G+L V + E+D
Sbjct 277 SQRGFAPVVRGVANTNAKVSIKQNGYTIYQITVPAGPFVINDLYASGYSGDLTVEIQESD 336
Query 354 GTVHTHDVPYAAVPNSLRAGLYNYNFSLGRTDLD-RAQDAYFSDFNYEYGLSNSITLNGG 412
G V + VP++ + +R G Y + GR +D R D +YGL+N +TLN
Sbjct 337 GKVRSFIVPFSNLAPLMRVGHLRYQLAGGRYRIDSRTFDERVLQGVLQYGLTNHLTLNSS 396
Query 413 VRLSQNYQAALFGGVWGSSLGALGTNVTYSRAE--LANLSGKDTTDGWMANITYSKTIQS 470
+ +++Y+A LFG + +GA + T+S AE L ++S +G+ + +YS
Sbjct 397 LLYTRHYRAGLFGFGLNTPIGAFSADATWSHAEFPLKHVS----KNGYSLHGSYSINFNE 452
Query 471 TNTTIAIAGYRYSTEGYRELNDVLGLAYAAKQ-GGDWSSNTYLQRSRFQINLSQQFGRFG 529
+ T I +A YRYS+ + L+D +GL +Q G + Y +++FQ++LSQ G +G
Sbjct 453 SGTNITLAAYRYSSRDFYTLSDTIGLNRTFRQFSGAYLPEIYRPKNQFQVSLSQSLGNWG 512
Query 530 SFYVAGSTQSYRDERKRDTAFQAGFSKSIGIMSFNLNYTR--QKVYSMRDDSLKHEYSDN 587
+ Y++G T +Y ++R +T +Q +S S I+++++N ++ K RD+S+
Sbjct 513 NLYLSGQTYNYWEKRGTNTQYQVAYSNSFHILNYSVNLSQSIDKETGKRDNSIY------ 566
Query 588 FGGISVHIPLGKARNPLRPTLSAYYNQSKNNENYQLALNGALDPNYSLNYTLGVNGS-SD 646
+S+ +PLG + + Y++S N+ N +L +NG+ + +Y G+N S ++
Sbjct 567 ---LSLSLPLGD-----NHSADSSYSRSGNDINQRLGVNGSFGERHQWSY--GINASRNN 616
Query 647 QTDTTYTAGLYKRFASLQLGA-NTSYGNQYWQN---SMSANGAVALHSGGVTFGPYLTET 702
Q +Y L + +G+ SY +N S+ A+GAV H G+T + E+
Sbjct 617 QGYRSYDGNLSH---NNSIGSYRASYSRDSLKNRSISLGASGAVVAHKHGITLSQPVGES 673
Query 703 FGLIEAKGAKGAKVISSPYSKIDRFGYALVPSLSPYRYNSVILDPQGIANNIELEGGEQR 762
F +I AK A GAKV S +D FG A++P SPY N + ++P N+E E E++
Sbjct 674 FAIIHAKDAAGAKVESGANVSLDYFGNAVMPYTSPYEINYIGINPSDAEANVEFEATERQ 733
Query 763 VAPYAGASVKIKFVTRTGYSVLIQSRLNNQHMIPMGTDVLNANEEVIGMVGQGGQMYL-R 821
+ P A + + F T VL L N +PM + ++ +G V QGG ++ +
Sbjct 734 IIPRANSISLVDFRTGKNTMVLFNLTLPNGEPVPMASTAQDSEGAFVGDVVQGGVLFANK 793
Query 822 VAQPKGILHLRWTDQQGASSCSLPYAI 848
+ QPKG L ++W +++ + C Y +
Sbjct 794 LTQPKGELIVKWGERE-SEQCRFQYQV 819
>P43662 Outer membrane usher protein LpfC [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=842
Score = 359 bits (922), Expect = 6e-114
Identities = 259/852 (30%), Positives = 421/852 (49%), Gaps = 62/852 (7%)
Query 38 TSASEAYTFDPHLFKGT-GLNQELIERFNHSSQLQ--AGQYTLDVYVNKRFIDRQQIKLV 94
T + A TF+P + G++Q + S++ + G+Y + V VN++ ++ + ++
Sbjct 27 TLPAYAGTFNPRFLEDVPGIDQHVDLSMYESNKAEHLPGKYRVSVVVNEKKMESRTLEFK 86
Query 95 DGSE-----QANTIDACWTTSLLERAGIL--GSPDFQKTRAEATHQILADECLKLDQIAP 147
+E ++ C + LE G+ P + EA C+ D I P
Sbjct 87 AATEAQRAKMGESLVPCLSRVQLEDMGVRIDSFPALKMAPPEA--------CVAFDDIIP 138
Query 148 GSQSDFDFSNLRLDLSIPQQFLKNLPRGYVSSEELDAGESIGFVNYS---GNYYRTESKF 204
+ S FDF++ L +S PQ +K RG V + D G + V+Y+ N
Sbjct 139 QAASHFDFADQTLIMSFPQAAMKQTARGTVPESQWDEGVNALLVDYNFSGSNASYDAHDS 198
Query 205 EHKQRHESGFVSLNAGVNAGKWQYRQQSNFSIDNDSHRHWNHIRSYLQRPIDSWASVLTL 264
E +S +++L +G+N G W+ R S ++ ND + W++I + L R I S LTL
Sbjct 199 ETSYNSDSYYLNLRSGMNLGAWRLRNYSTWT-RNDGNNTWDNIGTSLSRAIVPLKSQLTL 257
Query 265 GQQYGSGQFFSTLPYLGLSIQTDERMRPDSMRGYAPVIRGTAQTNAKVSIEQNGREIYQI 324
G +G F ++ G+ + +DE M PDS RG+APVIRG A++NA+V++EQN IY+
Sbjct 258 GDTSTAGDIFDSVQMRGVQLTSDEEMLPDSQRGFAPVIRGIAKSNAEVTVEQNNYVIYRT 317
Query 325 SVAPGPFEIKDLYPTNFEGNLKVVVTEADGTVHTHDVPYAAVPNSLRAGLYNYNFSLG-- 382
V PG FEI DLYPT+ G+L V + E+DG+ P+++V R G Y+ S G
Sbjct 318 FVQPGAFEINDLYPTSNSGDLTVTIKESDGSEQKFVQPFSSVALLQREGHLKYSLSAGEY 377
Query 383 RTDLDRAQDAYFSDFNYEYGLSNSITLNGGVRLSQNYQAALFGGVWGS--SLGALGTNVT 440
R + + F + YGL T+ GG S +Y +L GG+ + +GA+ +VT
Sbjct 378 RAGNYNSAEPKFGQLDAMYGLPYGFTVYGGAIFSDDYY-SLAGGLGKNFGYIGAISIDVT 436
Query 441 YSRAELANLSGKDTTDGWMANITYSKTIQSTNTTIAIAGYRYSTEGYRELNDVLGLAYAA 500
++++LAN ++ ++G YSK+ S T + GY+YST GY + A
Sbjct 437 QAKSKLAN---EENSEGQSYRFLYSKSFNS-GTDFRLLGYKYSTSGYYTFQE----ATDV 488
Query 501 KQGGDWSSNTYLQRSRFQINLSQQFGRFGSFYVAGSTQSYRDERKRDTAFQAGFSKSIGI 560
+ D S + Y +RS+ Q N++QQ G +GS Y + Q Y ++ + + AG++ IG
Sbjct 489 RSDADSSYSQYHKRSQIQGNVTQQLGAWGSVYFNVTQQDYWNDEGKQRSLNAGYNGRIGR 548
Query 561 MSFNLNYTRQKVYSMRDDSLKHEYSDNFGGISVHIPLGKARNPLRPTLSAYYNQSKNNEN 620
+++++ YT K S + + SD S+ IPLG+ + T + N
Sbjct 549 VNYSVAYTWTK-------SPEWDESDRLLSFSMSIPLGRVWSNYHLTTDQH-----GRTN 596
Query 621 YQLALNGALDPNYSLNYTL----GVN--GSSDQTDTTYTAGLYKRFASLQLGANTSYGNQ 674
QL ++G +++LNY++ G N G+S + Y G+ S LG N Y
Sbjct 597 QQLGVSGTALEDHNLNYSVQEGYGSNGVGNSGSVNLDYQGGV----GSASLGYN--YNRD 650
Query 675 YWQNSMSANGAVALHSGGVTFGPYLTETFGLIEAKGAKGAKVISSPYSKIDRFGYALVPS 734
Q + G V HS G+T L E+ +I A GA+GA VI++ ++D G A+VP
Sbjct 651 GQQVNYGLRGGVIAHSEGITLSQPLGESMAIISAPGARGAHVINNGGVEVDWMGNAVVPY 710
Query 735 LSPYRYNSVILDPQGIANNIELEGGEQRVAPYAGASVKIKFVTRTGYSVLIQSRLNNQHM 794
L+PYR V L + N ++L+ V P GA V+ +F TR GY VL+ N
Sbjct 711 LTPYRETEVSLRSDSLNNQVDLDTASVNVVPTRGAIVRARFDTRVGYRVLMNLTQANGKA 770
Query 795 IPMG--TDVLNANEEVIGMVGQGGQMYLRVAQPKGILHLRWTDQQGASSCSLPYAISDIE 852
+P G +L+ +E +VG+ GQ+Y+ KG L + W Q A C + + + + +
Sbjct 771 VPFGATATLLDTTKESSSIVGEDGQLYISGMPEKGALQVNWGKDQ-AQQCRVAFTLPEQQ 829
Query 853 LNQPLIKLSAVC 864
N ++ +AVC
Sbjct 830 DNTGVVMANAVC 841
>P30130 Outer membrane usher protein FimD [Escherichia coli (strain
K12)]
Length=878
Score = 358 bits (919), Expect = 4e-113
Identities = 247/839 (29%), Positives = 401/839 (48%), Gaps = 60/839 (7%)
Query 61 IERFNHSSQLQAGQYTLDVYVNKRFIDRQQIKLVDGSEQANTIDACWTTSLLERAGILGS 120
+ RF + +L G Y +D+Y+N ++ + + G + + C T + L G+
Sbjct 64 LSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVP-CLTRAQLASMGL--- 119
Query 121 PDFQKTRAEATHQILADE-CLKLDQIAPGSQSDFDFSNLRLDLSIPQQFLKNLPRGYVSS 179
T + A +LAD+ C+ L + + + D RL+L+IPQ F+ N RGY+
Sbjct 120 ----NTASVAGMNLLADDACVPLTTMVQDATAHLDVGQQRLNLTIPQAFMSNRARGYIPP 175
Query 180 EELDAGESIGFVNYSGNYYRTESKFEHKQRHESGFVSLNAGVNAGKWQYRQQSNFSIDND 239
E D G + G +NY+ + +++ + +++L +G+N G W+ R + +S ++
Sbjct 176 ELWDPGINAGLLNYNFSGNSVQNRIGGNSHY--AYLNLQSGLNIGAWRLRDNTTWSYNSS 233
Query 240 -----SHRHWNHIRSYLQRPIDSWASVLTLGQQYGSGQFFSTLPYLGLSIQTDERMRPDS 294
S W HI ++L+R I S LTLG Y G F + + G + +D+ M PDS
Sbjct 234 DRSSGSKNKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDS 293
Query 295 MRGYAPVIRGTAQTNAKVSIEQNGREIYQISVAPGPFEIKDLYPTNFEGNLKVVVTEADG 354
RG+APVI G A+ A+V+I+QNG +IY +V PGPF I D+Y G+L+V + EADG
Sbjct 294 QRGFAPVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADG 353
Query 355 TVHTHDVPYAAVPNSLRAGLYNYNFSLGRTDLDRAQD--AYFSDFNYEYGLSNSITLNGG 412
+ VPY++VP R G Y+ + G AQ F +GL T+ GG
Sbjct 354 STQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEKTRFFQSTLLHGLPAGWTIYGG 413
Query 413 VRLSQNYQAALFG-GVWGSSLGALGTNVTYSRAELANLSGKDTTDGWMANITYSKTIQST 471
+L+ Y+A FG G +LGAL ++T + + L + S DG Y+K++ +
Sbjct 414 TQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPDDS---QHDGQSVRFLYNKSLNES 470
Query 472 NTTIAIAGYRYSTEGYRELNDVL-------------GLAYAAKQGGDWSSNTYLQRSRFQ 518
T I + GYRYST GY D G+ + D+ + Y +R + Q
Sbjct 471 GTNIQLVGYRYSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQ 530
Query 519 INLSQQFGRFGSFYVAGSTQSYRDERKRDTAFQAGFSKSIGIMSFNLNYTRQKVYSMRDD 578
+ ++QQ GR + Y++GS Q+Y D FQAG + + +++ L+Y+ K
Sbjct 531 LTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTK------- 583
Query 579 SLKHEYSDNFGGISVHIPLGKARNPLRPTLSAYYNQSKNNENYQLALNGAL--------- 629
+ + D ++V+IP + LR + + + + + LNG +
Sbjct 584 NAWQKGRDQMLALNVNIPFS---HWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGT 640
Query 630 ---DPNYSLNYTLGVNGSSD-QTDTTYTAGLYKRFASLQLGANTSYGNQYWQNSMSANGA 685
D N S + G G D + +T A L R S+ + Q +G
Sbjct 641 LLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGG 700
Query 686 VALHSGGVTFGPYLTETFGLIEAKGAKGAKVISSPYSKIDRFGYALVPSLSPYRYNSVIL 745
V H+ GVT G L +T L++A GAK AKV + + D GYA++P + YR N V L
Sbjct 701 VLAHANGVTLGQPLNDTVVLVKAPGAKDAKVENQTGVRTDWRGYAVLPYATEYRENRVAL 760
Query 746 DPQGIANNIELEGGEQRVAPYAGASVKIKFVTRTGYSVLIQSRLNNQHMIPMGTDVLNAN 805
D +A+N++L+ V P GA V+ +F R G +L+ NN+ +P G V + +
Sbjct 761 DTNTLADNVDLDNAVANVVPTRGAIVRAEFKARVGIKLLMTLTHNNK-PLPFGAMVTSES 819
Query 806 EEVIGMVGQGGQMYLRVAQPKGILHLRWTDQQGASSCSLPYAISDIELNQPLIKLSAVC 864
+ G+V GQ+YL G + ++W +++ A C Y + Q L +LSA C
Sbjct 820 SQSSGIVADNGQVYLSGMPLAGKVQVKWGEEENA-HCVANYQLPPESQQQLLTQLSAEC 877
>P21647 Outer membrane usher protein MrkC [Klebsiella pneumoniae]
Length=828
Score = 356 bits (913), Expect = 9e-113
Identities = 243/787 (31%), Positives = 399/787 (51%), Gaps = 47/787 (6%)
Query 67 SSQLQAGQYTLDVYVNKRFIDRQQIKLVDGSEQANTIDACWTTSLLERAGILGSPDFQKT 126
+S + G Y+LDVY N + R +K+ G + + C+T ++L + GI SP+
Sbjct 57 TSAISEGVYSLDVYTNGEWKGRYDLKITAGKD--GKMGVCYTKAMLMQYGI--SPE---- 108
Query 127 RAEATHQILADE--CLKLDQIA--PGSQSDFDFSNLRLDLSIPQQFLKNLPRGYVSSEEL 182
+ Q+ E C +L + + S+LRLD+++PQ + + +VS +
Sbjct 109 --KLNPQLSEKEGFCGRLQEWRHEDNVKDTLIQSSLRLDIAVPQIYEDQRLKNFVSPQFW 166
Query 183 DAGESIGFVNYSGNYYRTESKFEHKQRHESGFVSLNAGVNAGKWQYRQQSNFSIDNDSHR 242
D G + + + N + + + + S ++ +NAG++ W + N + +
Sbjct 167 DKGVAALNLGWMANAWNSHISSANGSDNSSAYLGVNAGLSWDGWLLKHIGNLNWQQQQGK 226
Query 243 -HWNHIRSYLQRPIDSWASVLTLGQQYGSGQFFSTLPYLGLSIQTDERMRPDSMRGYAPV 301
HWN ++YLQRPI S+++ GQ + +G+FF T+ G+++ TD+ M PD MR YAP
Sbjct 227 AHWNSNQTYLQRPIPQINSIVSGGQIFTNGEFFDTIGLRGVNLATDDNMFPDGMRSYAPE 286
Query 302 IRGTAQTNAKVSIEQNGREIYQISVAPGPFEIKDLYPTNFEGNLKVVVTEADGTVHTHDV 361
IR AQ+NA ++ Q IYQ +V PGPF ++D+YP+ + +L+V V E DG+V V
Sbjct 287 IRDVAQSNALATVRQGSNIIYQTTVPPGPFTLQDVYPSGYGSDLEVSVKEGDGSVEVFSV 346
Query 362 PYAAVPNSLRAGLYNYNFSLGRTDLDRAQD-AYFSDFNYEYGLSNSITLNGGVRLSQNYQ 420
PYA+V LR G+ Y S G+ D ++ +++GL+N T GV +YQ
Sbjct 347 PYASVAQLLRPGMTRYALSAGKVDDSSLRNKPMLYQGTWQHGLNNLFTGYTGVTGFDDYQ 406
Query 421 AALFGGVWGSSLGALGTNVTYSRAELANLSGKDTTD--GWMANITYSKTIQSTNTTIAIA 478
A L G + +GAL +VT++R + DT D G T+++ T T+I +A
Sbjct 407 AFLLGTGMNTGIGALSFDVTHTRLK------SDTLDEHGQSYRATFNRMFTETQTSIVLA 460
Query 479 GYRYSTEGYRELNDVLGLAYAAKQGGDWSSNTYLQRSR----FQINLSQQFGRFGSFYVA 534
YRYST+GY LND L YA Q +++SN + R + F +N + G +G FY+
Sbjct 461 AYRYSTKGYYNLNDAL---YAVDQEKNYNSNYTVWRQKNGMTFTVNQNLPDG-WGGFYLC 516
Query 535 GSTQSYRDERKRDTAFQAGFSKSIGIMSFNLNYTRQKVYSMRDDSLKHEYSDNFGGISVH 594
G Y + + +Q ++ G +S++++ Q+VY+ DS H D ++
Sbjct 517 GRVADYWNRSGTEKQYQFSYNNMYGRLSWSVD--AQRVYT--PDSSGHRRDDRV-SLNFS 571
Query 595 IPLGKARNPLRPTLSAYYNQSKNNENY---QLALNGALDPNYSLNYTLGVNGSSDQTDTT 651
PL N T + N + NN + Q+ +NG+LD +LNY + ++ +
Sbjct 572 YPLWFGEN---RTANLTSNTAFNNSRFASSQIGVNGSLDSENNLNYGVSTTTATGRQHDV 628
Query 652 YTAGLYKRFASLQLGANTSYGNQYWQNSMSANGAVALHSGGVTFGPYLTETFGLIEAKGA 711
G Y R L + S G Y Q+ + A+G + H GV F P T LIEAK A
Sbjct 629 ALNGSY-RTPWTTLNGSYSQGEGYRQSGVGASGTLIAHQHGVVFSPETGPTMALIEAKDA 687
Query 712 KGAKVISSPYSKIDRFGYALVPSLSPYRYNSVILDPQGIANNIELEGGEQRVAPYAGASV 771
G + SP ++ID GYA++P L PYR NSV +DP+G +++ +V P+ G+ V
Sbjct 688 AGVMLPGSPGTRIDSNGYAILPYLRPYRINSVEIDPKGSNDDVAFGSTVAQVVPWEGSVV 747
Query 772 KIKFVTRTGYSVLIQSRLNNQHMIPMGTDVLNANEEVIGMVGQGGQMYLRVAQ-PKGILH 830
K+ F T ++ +++R N +P + + + IG+VGQG M++ A PK
Sbjct 748 KVSFDTTLQNNITLRARQANGLPLPFAATIFGPSGKEIGVVGQGSMMFISDASAPKAT-- 805
Query 831 LRWTDQQ 837
++W+ Q
Sbjct 806 VKWSGGQ 812
>P33410 Outer membrane usher protein FimC [Bordetella pertussis
(strain Tohama I / ATCC BAA-589 / NCTC 13251)]
Length=873
Score = 354 bits (909), Expect = 9e-112
Identities = 261/836 (31%), Positives = 401/836 (48%), Gaps = 77/836 (9%)
Query 43 AYTFDPHLFKGTGLNQELIERFNHSSQLQAGQYTLDVYVNKRFIDRQQIKLVDGSEQANT 102
A FD + G G N + RFN+S+ L+ G Y +D+Y N + RQQ++ V
Sbjct 29 AVNFDSAMLWG-GANGADLSRFNYSNALRPGNYIVDIYANNYPLIRQQVRFVAAQTSGQG 87
Query 103 ID-----ACWTTSLLERAGILGSPDFQKTRAEATHQILAD-----ECLKLDQIAPGSQSD 152
+ AC+T LE + + RA ++AD C L ++ P S+
Sbjct 88 LKTAPAVACFTYGQLEAMQV-------RLRA-LDPALVADLKSSGRCEVLGKLFPDSRES 139
Query 153 FDFSNLRLDLSIPQQFLKNLPRGYVSSEELDAGESIGFVNYSGNYYRTESKFEHKQRHES 212
FDF RL++SIPQ + N R +S +E D+G + + Y NY +R +
Sbjct 140 FDFGENRLEVSIPQAYTINRFRRDISPDEWDSGITAFRLGYQYNYADYIGGLRAGRRLD- 198
Query 213 GFVSLNAGVNAGKWQYRQQSNFSIDNDSHRHWNHIRSYLQRPIDSWASVLTLGQQYGSGQ 272
++L +G N W R S + R+ LQ I SW + L G + SG+
Sbjct 199 --LNLYSGFNFKGWYLRNSSTLGWGQGRFTRRSQ-RTSLQTDIPSWRARLVFGDVFSSGE 255
Query 273 FFSTLPYLGLSIQTDERMRPDSMRGYAPVIRGTAQTNAKVSIEQNGREIYQISVAPGPFE 332
+F+ G+ + +D M P S R Y P IRG A+T A V + Q G ++Q +V PGPF
Sbjct 256 YFAPYSMRGMLVGSDTAMLPYSERLYRPTIRGVARTRANVKVYQAGVLVFQDAVPPGPFA 315
Query 333 IKDLYPTNFEGNLKVVVTEADGTVHTHDVPYAAVPNSLRAGLYNYNFSLGRTDLDR--AQ 390
I D P ++ G+L+VVVTEA+G V T VPYA+ + G ++FS GR R Q
Sbjct 316 IDDYSPASYGGDLRVVVTEANGAVQTFTVPYASAVRLILPGQTQWSFSAGRYRNYRNDGQ 375
Query 391 D-AYFSDFNYEYGLSNSITLNGGVRLSQNYQAALFGGVWGSSLGALGTNVTYSRAELANL 449
D + + +G+++ + L GG+ ++Q YQA L G W + GA+ + T SR++ L
Sbjct 376 DRPWVTQLTGRHGVADGVNLYGGLLIAQAYQAGLAGLSWNTPWGAMAADATLSRSQ---L 432
Query 450 SGKDTTDGWMANITYSKTIQSTNTTIAIAGYRYSTEGYRELNDVLGLAYAAKQG--GDWS 507
S +G +YSKT+ TNT I +A RYS+ G+ D + G G +
Sbjct 433 STTGNANGSSLRFSYSKTLSGTNTAIRLATLRYSSSGFWNFADAVNAGPVETNGRNGRFG 492
Query 508 SNTYLQRSR----FQINLSQQFGRFGSFYVAGSTQSYRDERKRDTAFQAGFSKSIGIMSF 563
+ L R R F + LSQ G +GS YV+ ++Y + D Q G+S +G +
Sbjct 493 LYSLLGRERPRGDFSVTLSQPLGGYGSLYVSALRRTYWGSSRVDQQTQLGYSTQVGRVGV 552
Query 564 NLNYTRQKVYSMRDDSLKHEYSDNFGGISVHIPLGKARNPLRPTLSAYYNQSKNNENYQL 623
NL+ +R + S +H+ +++ IPL Y S L
Sbjct 553 NLDVSRTE----NRRSTEHQVM-----LNLSIPL-------------YGATSSGVVTGSL 590
Query 624 ALNGALDPNYSLNYTLGVNGSSDQTDTTYTAGLYKRFASLQLGANTS------------- 670
A G+ S+NY+ G++G DQ TY G+ + S Q N S
Sbjct 591 ARTGSAPVQQSVNYS-GMSGERDQ--YTYGLGVQRAGTSAQYALNGSWSGTYGEVSGQLT 647
Query 671 YGNQYWQNSMSANGAVALHSGGVTFGPYLTETFGLIEAKGAKGAKVISSPYSKIDRFGYA 730
+G Y Q ++ +G + H+GGVTFG Y T GLI+A+ A GAKV+++ + +DR GY
Sbjct 648 HGRSYSQYQINGSGGLVAHAGGVTFGQYQAGTIGLIQAEAAAGAKVVNTRNAAVDRSGYG 707
Query 731 LVPSLSPYRYNSVILDPQGIANNIELEGGEQRVAPYAGASVKIKFVTRTGYSVLIQSRLN 790
LV SL+PY N V L PQ + +++LE ++V P AGA V ++F TR + ++ +
Sbjct 708 LV-SLTPYSLNEVELSPQDLPLDVQLESTVEQVIPRAGAVVALRFPTRHDVAAMLVAEPG 766
Query 791 NQHMIPMGTDVLNANEEVIGMVGQGGQMYLRVAQPKGILHLRWTDQQGASSCSLPY 846
++ + GT+V + +V+G+ GQG +R G L + D S C Y
Sbjct 767 SEGALVFGTEVRDGAGKVVGVAGQGASALVRGVSASGTLEVTRAD---GSICRATY 819
>P33129 Outer membrane usher protein HtrE [Escherichia coli (strain
K12)]
Length=865
Score = 338 bits (866), Expect = 1e-105
Identities = 248/834 (30%), Positives = 413/834 (50%), Gaps = 47/834 (6%)
Query 40 ASEAYTFDPHLFKGTGLNQELIERFNHSSQLQAGQYTLDVYVNKRFIDRQQIKLVDGSEQ 99
++E +D G + + R++ + G Y + VYVN + I Q I V E
Sbjct 29 SAELVEYDHTFLMGQNASNIDLSRYSEGNPAIPGVYDVSVYVNDQPIINQSITFV-AIEG 87
Query 100 ANTIDACWTTSLLERAGILGSPDFQKTRAE--ATHQILADECLKLDQIAPGSQSDFDFSN 157
AC T L + I SPD +A A + L + CL L +I P + +D ++
Sbjct 88 KKNAQACITLKNLLQFHI-NSPDINNEKAVLLARDETLGN-CLNLTEIIPQASVRYDVND 145
Query 158 LRLDLSIPQQFLKNLPRGYVSSEELDAGESIGFVNYSGNYYRTESKFEHKQRHESGFVSL 217
RLD+ +PQ ++ + YV + G + ++Y+ N Y +E+ +++ES + +
Sbjct 146 QRLDIDVPQAWVMKNYQNYVDPSLWENGINAAMLSYNLNGYHSETP---GRKNESIYAAF 202
Query 218 NAGVNAGKWQYRQQSNFSIDNDSHRHWNHIRSYLQRPIDSWASVLTLGQQYGSGQFFSTL 277
N G+N G W+ R N++ DS +++ Y+QR I S S L LG+ Y +G+ F ++
Sbjct 203 NGGMNLGAWRLRASGNYNWMTDSGSNYDFKNRYVQRDIASLRSQLILGESYTTGETFDSV 262
Query 278 PYLGLSIQTDERMRPDSMRGYAPVIRGTAQTNAKVSIEQNGREIYQISVAPGPFEIKDLY 337
G+ + +D RM P ++ +AP+I G A TNAKV+I Q G +IY+ +V PG F I DL
Sbjct 263 SIRGIRLYSDSRMLPPTLASFAPIIHGVANTNAKVTITQGGYKIYETTVPPGAFVIDDLS 322
Query 338 PTNFEGNLKVVVTEADGTVHTHDVPYAAVPNSLRAGLYNYNFSLGRTDLDRAQD-AYFSD 396
P+ + +L V + E+DG+ T P+++V LR G+ ++ S G+ D QD
Sbjct 323 PSGYGSDLIVTIEESDGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQ 382
Query 397 FNYEYGLSNSITLNGGVRLS-QNYQAALFGGVWGSSLGALGTNVTYSRAELANLSGKDTT 455
+Y YGL+N +T G++++ NY A L G +S+GA +VT+S + + T
Sbjct 383 ASYYYGLNNYLTGYTGIQITDNNYTAGLLGLGLNTSVGAFSFDVTHSNVRIPD---DKTY 439
Query 456 DGWMANITYSKTIQSTNTTIAIAGYRYSTEGYRELNDVLGLAYAAKQ-GGDWSSNTYLQR 514
G ++++K + T+T++ IA YRYST+ Y LND L L K D +
Sbjct 440 QGQSYRVSWNKLFEETSTSLNIAAYRYSTQNYLGLNDALTLIDEVKHPEQDLEPKSMRNY 499
Query 515 SRFQ------INLSQQFGR--FGSFYVAGSTQSYRDERKRDTAFQAGFSKSIGIMSFNLN 566
SR + IN +F + +GSFY++GS Y + + + G+S S S++++
Sbjct 500 SRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQNRSNYSIGYSNSTSWGSYSVS 559
Query 567 YTRQKVYSMRDDSLKHEYSDNFGGISVHIPLGKARNPLRPTL------SAYYNQSKNNEN 620
R S +D +D+ +S IP+ K + T + + K N
Sbjct 560 AQR----SWNEDG----DTDDSVYLSFTIPIEKLLGTEQRTSGFQSIDTQISSDFKGNNQ 611
Query 621 YQLALNGALD---PNYSLNYTLGVNGSSDQTDTTYTAGL--YKRFASLQLGANTSYGNQY 675
++ +G D +YS+N +N +S D +Y G Y+ G+ ++ +
Sbjct 612 LNVSSSGYSDNARVSYSVNTGYTMNKAS--KDLSYVGGYASYESPWGTLAGSISANSDNS 669
Query 676 WQNSMSANGAVALHSGGVTFGPYL---TETFGLIEAKGAKGAKVISSPYSKIDRFGYALV 732
Q S+S +G LHSGG+TF ++T +++A GA+GA+ I+ S IDR+GY +
Sbjct 670 RQVSLSTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAQGAR-INYGNSTIDRWGYGVT 728
Query 733 PSLSPYRYNSVILDPQGIANNIELEGGEQRVAPYAGASVKIKFVTRTGYSVLIQSRLNNQ 792
+LSPY N + LD + N++EL+ P G+ V F T G S ++ ++
Sbjct 729 SALSPYHENRIALDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSAIMNITRSDG 788
Query 793 HMIPMGTDVLNANEEVIGMVGQGGQMYLRVAQPKGILHLRWTDQQGASSCSLPY 846
IP D+ + VIG VGQGGQ ++R + +G + ++W +Q SC Y
Sbjct 789 KNIPFAADIYDEQGNVIGNVGQGGQAFVRGIEQQGNISIKWLEQSKPVSCLAHY 842
>P46009 Outer membrane usher protein FocD [Escherichia coli]
Length=875
Score = 335 bits (860), Expect = 1e-104
Identities = 238/836 (28%), Positives = 389/836 (47%), Gaps = 58/836 (7%)
Query 61 IERFNHSSQLQAGQYTLDVYVNKRFIDRQQIKLVDGSEQANTIDACWTTSLLERAGILGS 120
+ F +L G Y +D+Y+N +I + ++ S+ + C + + G+
Sbjct 65 LSAFTQGQELPPGVYRVDIYLNDTYISTRDVQF-QMSQDGKQLAPCLSPEHMSAMGV--- 120
Query 121 PDFQKTRAEATHQILADECLKLDQIAPGSQSDFDFSNLRLDLSIPQQFLKNLPRGYVSSE 180
+ ++ AD C L+ + G+ FD RL L++PQ ++ N RGY++ E
Sbjct 121 ---NRYAVPGMERLPADTCTSLNSMIQGATFRFDVGQQRLYLTVPQLYMSNQARGYIAPE 177
Query 181 ELDAGESIGFVNY--SGNYYRTESKFEHKQRHESGFVSLNAGVNAGKWQYRQQSNFSIDN 238
D G + +NY SGN R + + +++L G+N G W+ R +++S
Sbjct 178 YWDNGITAALLNYDFSGNRVRDT----YGGTSDYAYLNLKTGLNIGSWRLRDNTSWSYSA 233
Query 239 D---SHRHWNHIRSYLQRPIDSWASVLTLGQQYGSGQFFSTLPYLGLSIQTDERMRPDSM 295
S +W HI ++L+R I S S LT+G Y G F + + G+ + +D+ M PDS
Sbjct 234 GKGYSQNNWQHINTWLERDIVSLRSRLTMGDSYTRGDIFDGVNFRGIQLASDDNMVPDSQ 293
Query 296 RGYAPVIRGTAQTNAKVSIEQNGREIYQISVAPGPFEIKDLYPTNFEGNLKVVVTEADGT 355
RGYAP I G ++ +++SI QNG EIYQ ++ PGPFEI D+YP G+L+V + EADG+
Sbjct 294 RGYAPTIHGISRGTSRISIRQNGYEIYQSTLPPGPFEINDIYPAGSGGDLQVTLQEADGS 353
Query 356 VHTHDVPYAAVPNSLRAGLYNYNFSLG--RTDLDRAQDAYFSDFNYEYGLSNSITLNGGV 413
V +VP+++VP R G Y S G R+ + + F++ +YGL + T+ GG
Sbjct 354 VQRFNVPWSSVPVLQREGHLKYALSAGEFRSGGHQQDNPRFAEGTLKYGLPDGWTVYGGA 413
Query 414 RLSQNYQAALFGGVWGSSLGALGTNVTYSRAELANLSGKDTTDGWMANITYSKTIQSTNT 473
+++ Y+A G G ++G LG + A L + DG Y+K++ T T
Sbjct 414 WIAERYRAFNLG--VGKNMGWLGAVSLDATRANARLPDESRHDGQSYRFLYNKSLTETGT 471
Query 474 TIAIAGYRYSTEGYRELND-----VLGLAYAAKQGGDWSSNTYLQRSRFQINLSQQFGRF 528
I + GYRYST GY D + G + + G Y N + G +
Sbjct 472 NIQLIGYRYSTRGYFTFADTAWKKMSGYSVLTQDGVIQIQPKYTDYYNLAYNKREGAGEY 531
Query 529 -------GSFYVAGSTQSYRDERKRDTAFQAGFSKSIGIMSFNLNYTRQKVYSMRDDSLK 581
+ Y++GS QSY + D AGF+ S+ +S++LN YS+ ++ +
Sbjct 532 QPADGESSTLYLSGSHQSYWGTDRTDRQLNAGFNSSVNDISWSLN------YSLSRNAWQ 585
Query 582 HEYSDNFGGISVHIPLGKARNPLRPTLSAYYNQSKNNENYQLALNGALDPNYSLNYT-LG 640
HE +D V IP + +R ++ + + + L +G L T LG
Sbjct 586 HE-TDRILSFDVSIPFS---HWMRSDSTSAWRNASARYSQTLEAHGQAASTAGLYGTLLG 641
Query 641 VNGSSDQTDTTYTAGLYK-----RFASL-------QLGANTSYGNQYWQNSMSANGAVAL 688
N + YT G Y+ +ASL A S+ Y Q +G +
Sbjct 642 DNNLGYSIQSGYTRGGYEGSSKTGYASLNYRGGYGNASAGYSHSGGYRQLYYGLSGGILA 701
Query 689 HSGGVTFGPYLTETFGLIEAKGAKGAKVISSPYSKIDRFGYALVPSLSPYRYNSVILDPQ 748
H+ G+T L +T L+ A GA ++ + D GYA++P + YR N V LD
Sbjct 702 HANGLTLSQPLGDTLILVRAPGASDTRIENQTGVSTDWRGYAVLPYATDYRENRVALDTN 761
Query 749 GIANNIELEGGEQRVAPYAGASVKIKFVTRTGYSVLIQSRLNNQHMIPMGTDVLNANEEV 808
+A+N+++E V P GA V+ + TR G VL+ + + N +P G+ V+ A
Sbjct 762 TLADNVDIENTVVSVVPTHGAVVRADYKTRVGVKVLM-TLMRNGKAVPFGS-VVTARNGG 819
Query 809 IGMVGQGGQMYLRVAQPKGILHLRWTDQQGASSCSLPYAISDIELNQPLIKLSAVC 864
+ G+ GQ+YL G + ++W Q C+ Y + Q L ++A C
Sbjct 820 SSIAGENGQVYLSGMPLSGQVSVKW-GSQTTDQCTADYKLPKESAGQILSHVTASC 874
>P33408 Outer membrane usher protein MyfC [Yersinia enterocolitica]
Length=841
Score = 310 bits (795), Expect = 1e-95
Identities = 238/840 (28%), Positives = 399/840 (48%), Gaps = 47/840 (6%)
Query 44 YTFDPHLFKGTGLNQEL---IERFNHSSQLQAGQYTLDVYVNKRFIDRQQIKL--VDGSE 98
YTFDP L +N + F QL G Y +D+++ +D + V
Sbjct 29 YTFDPILLANNNINANANTDLSLFEQGGQLP-GTYQVDIFLGDEKMDSTNVTFHAVKSPT 87
Query 99 QANTIDACWTTSLLERAGIL--GSPDFQKTRAEATHQILADECLKLDQIAPGSQSDFDFS 156
++ +C T L R G+ P+ A +C+ L I P + +F+F
Sbjct 88 GEYSLQSCLTKEQLSRYGVDVDNYPELLPPEKNIQQDKQASQCVNLAAI-PQASEEFEFY 146
Query 157 NLRLDLSIPQQFLKNLPRGYVSSEELDAGESIGFVNYSGNYYRTESKFEHKQRHESGFVS 216
+RL L+IPQ L+ P+ + E D G + +NY N T + +Q+ S +V
Sbjct 147 AMRLVLNIPQVALR--PKDEIPVERWDDGITAFLLNYMANSSTTTYRQTGEQQ-SSHYVQ 203
Query 217 LNAGVNAGKWQYRQQSNFSIDNDSHRHWNHIRSYLQRPIDSWASVLTLGQQYGSGQFFST 276
L G N G W+ R ++++ +S W Y R + S +TLGQ Y G FF +
Sbjct 204 LYPGFNIGAWRIRNATSWNQSGNSAGKWQSSYIYATRGLYRLKSRVTLGQSYTPGDFFDS 263
Query 277 LPYLGLSIQTDERMRPDSMRGYAPVIRGTAQTNAKVSIEQNGREIYQISVAPGPFEIKDL 336
+P+ G+ + D+ M P S R + PV+RG A++ A+V + QNG +Y V+PGPFE+ D+
Sbjct 264 VPFSGVMLGDDDNMLPSSQRDFIPVVRGIARSQARVEVRQNGYLLYSTVVSPGPFELTDI 323
Query 337 YPTNFEGNLKVVVTEADGTVHTHDVPYAAVPNSLRAGLYNYNFSLGR---TDLDRAQDAY 393
P++ G+L V V E++GT VPY+ LR G YN GR ++D +
Sbjct 324 LPSHSNGDLHVTVLESNGTTQQFTVPYSVPAIRLRKGRLRYNLMAGRYRPANVD-VETTP 382
Query 394 FSDFNYEYGLSNSITLNGGVRLSQNYQAALFG-GVWGSSLGALGTNVTYSRAELANLSGK 452
+ YGL ++T G + S +YQA G GV GAL +++T + +E +
Sbjct 383 IAQATVAYGLPWNLTAFVGGQWSPHYQATTAGMGVMLGDYGALSSSITQATSEYRQ---Q 439
Query 453 DTTDGWMANITYSKTIQSTNTTIAIAGYRYSTEGYRELNDVLGLAYAAKQGG--DWSSNT 510
G + + Y+KT+Q+++T+ ++ +YST + L+DVL +Y DW SN+
Sbjct 440 QPVKGQVWEVRYNKTLQASDTSFSVVNSQYSTADFSNLSDVL-QSYRRHDYSRRDWHSNS 498
Query 511 YLQRSRFQINLSQQFGRFGSFYVAGSTQSYRDERKRDTAFQAGFSKSIGIMSFNLNYTRQ 570
R++ + + Q G+FG + S Q+YRD +++ +S +IG + +L++T+
Sbjct 499 L--RNQTHVVVGQPLGQFGYLNLNWSRQNYRD-APASSSWGVQYSFNIGNLYCSLDWTQN 555
Query 571 KVYSMRDDSLKHEYSDNFGGISVHIPLGKARNPLRPTLSAY-YNQSKNNENYQLALNG-A 628
+ +D L +SV +PLG+ R+ T +AY S N+++++++L G A
Sbjct 556 QYRGNQDRLL---------SLSVSMPLGRERD----TYAAYRMTSSDNSKDHEMSLYGHA 602
Query 629 LDPNYSLNYTLGVNGSSDQT-DTTYTAGLYKRFASLQLGANTSYGNQYWQNSMSANGAVA 687
D S N + + + + + GL + + +G N Y Q S + +G
Sbjct 603 FDNRLSWNVRQTERYAQFHSGENSGSLGLDWQGSYGDIGGNYYYTPTIRQFSANVSGGAV 662
Query 688 LHSGGVTFGPYLTETFGLIEAKGAKGAKVISSPYSKIDRFGYALVPSLSPYRYNSVILDP 747
+H G+T GP + T L+E G G K D GY++VP++ PY + ++L+
Sbjct 663 IHRHGLTLGPQINGTAALVEVPGVSGVSTSEDHRLKTDFRGYSIVPNIFPYEEHDILLET 722
Query 748 QGIANNIELEGGEQRVAPYAGASVKIKFVTRTGYSVLIQSRLNNQHMIPMGTDVLNANEE 807
+ + E+ + +V P GA V+ F + G L+ NN IP G N+
Sbjct 723 TDLPPDAEVTKTDAKVLPTEGAIVRASFSPQIGARALMTITRNNGETIPFGAMASLVNQP 782
Query 808 V-IGMVGQGGQMYLRVAQPKGILHLRWTDQQGAS-SCSLPYAISDIELNQP-LIKLSAVC 864
+V +GG+ YL G L ++W +GAS C + Y +++ + L LS VC
Sbjct 783 ANAAIVDEGGKAYLTGLPETGQLLVQW--GRGASQQCRVDYQLANAKKGDAGLYMLSGVC 840
Lambda K H a alpha
0.316 0.133 0.389 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 8979091
Database: dff14d18e7c0108becc1c2073581be71.SwissProt.fasta
Posted date: May 29, 2024 9:12 PM
Number of letters in database: 11,953
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
