BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 3afc7c22b3d5276a954ef503a37b18ed.SwissProt.fasta
           1 sequences; 208 total letters



Query= ACIAD0169

Length=242
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q9XAQ2 Peptide deformylase 3 [Streptomyces coelicolor (strain ATC...  35.8    2e-07


>Q9XAQ2 Peptide deformylase 3 [Streptomyces coelicolor (strain 
ATCC BAA-471 / A3(2) / M145)]
Length=208

 Score = 35.8 bits (81),  Expect = 2e-07
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 0/46 (0%)

Query  160  YPSISPNYGDGIVLPETESGKQIIISPFEDNEDEGPQLAILIINAF  205
            YP  +P  G G V   TE G++++  P  D  + GP LA LI + F
Sbjct  14   YPPFAPEAGRGAVRRVTEVGEEVLHRPCRDVTEFGPDLAALIDDMF  59


 Score = 18.1 bits (35),  Expect = 0.12
 Identities = 7/9 (78%), Positives = 7/9 (78%), Gaps = 0/9 (0%)

Query  86  EGAGLVRNQ  94
           EGAGL  NQ
Sbjct  66  EGAGLAANQ  74


 Score = 14.6 bits (26),  Expect = 1.6
 Identities = 6/26 (23%), Positives = 13/26 (50%), Gaps = 0/26 (0%)

Query  169  DGIVLPETESGKQIIISPFEDNEDEG  194
            +G  L   + G  + +  ++  +DEG
Sbjct  66   EGAGLAANQVGVDLRLFVYDCPDDEG  91


 Score = 14.2 bits (25),  Expect = 2.2
 Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 0/28 (0%)

Query  10   GLVLLVFGSTISACADSSSVDCNKNNVY  37
            G+ LLV G+   A   +   D    +VY
Sbjct  145  GVPLLVEGTGYFARCLAHETDHVNGHVY  172


 Score = 13.9 bits (24),  Expect = 2.9
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)

Query  100  YLSRLS  105
            YL RLS
Sbjct  172  YLDRLS  177



Lambda      K        H        a         alpha
   0.317    0.136    0.393    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 40920


  Database: 3afc7c22b3d5276a954ef503a37b18ed.SwissProt.fasta
    Posted date:  May 19, 2024  9:20 PM
  Number of letters in database: 208
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40