BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: f74aed86be78fb2d7b096a536a4677d9.SwissProt.fasta
6 sequences; 1,956 total letters
Query= ACIAD0177
Length=285
Score E
Sequences producing significant alignments: (Bits) Value
Q8FUU6 High-affinity zinc uptake system protein ZnuA [Brucella su... 87.4 1e-23
Q8YDJ7 High-affinity zinc uptake system protein ZnuA [Brucella me... 87.4 1e-23
Q576K1 High-affinity zinc uptake system protein ZnuA [Brucella ab... 87.4 1e-23
Q2YJH5 High-affinity zinc uptake system protein ZnuA [Brucella ab... 87.4 1e-23
Q9RPX0 High-affinity zinc uptake system protein ZnuA [Haemophilus... 84.7 9e-23
P39172 High-affinity zinc uptake system protein ZnuA [Escherichia... 80.5 3e-21
>Q8FUU6 High-affinity zinc uptake system protein ZnuA [Brucella
suis biovar 1 (strain 1330)]
Length=334
Score = 87.4 bits (215), Expect = 1e-23
Identities = 66/249 (27%), Positives = 105/249 (42%), Gaps = 43/249 (17%)
Query 18 SAVSWAQGPLVVSTHPLYLIAKEVTQGVEEPQLLL-GNQSGHDIQLTPAHRKAIQDASLV 76
S+++ + +VVS PL+ I V QGV +P+L++ G S H L P+ +AI+ A ++
Sbjct 20 SSLAGEREGVVVSIKPLHSIVSAVMQGVGKPKLIVQGAGSEHVYSLKPSDAEAIEHAKVI 79
Query 77 VWLGKTHEAPLAKLLDNNPKAISIINSQIVTGLPQRTTR-GVPIP--------------- 120
W G + E L K +D + ++ GL + R G P
Sbjct 80 FWAGPSMETFLDKPIDTLGEGAKVVALGDAKGLTKLKFREGGPFEAHDHGHGGSHEEEHD 139
Query 121 -----------------------NTVDTHVWLDPNNAIRIGFFIAALRSQQMPENQTKYW 157
D H WLDP N + IA + PE+ +Y
Sbjct 140 AHGSGDHDHAAEVAEEGHEHHHHGEYDLHFWLDPQNGKILAADIAKTLGESDPEHAAQYE 199
Query 158 NNARKFAREMLQAAQPYNTTASP---KPYWSYHDAYQYLERALNLKFAGAMTDDPHVAPT 214
NA+ + ++ + P KP+ +HDAYQY E +K AG++T P AP
Sbjct 200 KNAKAYGEKLDALTREVAAELKPVKDKPFIVFHDAYQYFENRFGMKAAGSITVSPEKAPG 259
Query 215 VAQIKYLND 223
A+I+ ++D
Sbjct 260 AARIQQIHD 268
>Q8YDJ7 High-affinity zinc uptake system protein ZnuA [Brucella
melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)]
Length=334
Score = 87.4 bits (215), Expect = 1e-23
Identities = 66/249 (27%), Positives = 105/249 (42%), Gaps = 43/249 (17%)
Query 18 SAVSWAQGPLVVSTHPLYLIAKEVTQGVEEPQLLL-GNQSGHDIQLTPAHRKAIQDASLV 76
S+++ + +VVS PL+ I V QGV +P+L++ G S H L P+ +AI+ A ++
Sbjct 20 SSLAGEREGVVVSIKPLHSIVSAVMQGVGKPKLIVQGAGSEHVYSLKPSDAEAIEHAKVI 79
Query 77 VWLGKTHEAPLAKLLDNNPKAISIINSQIVTGLPQRTTR-GVPIP--------------- 120
W G + E L K +D + ++ GL + R G P
Sbjct 80 FWAGPSMETFLDKPIDTLGEGAKVVALGDAKGLTKLKFREGGPFEAHDHGHGGSHEEEHD 139
Query 121 -----------------------NTVDTHVWLDPNNAIRIGFFIAALRSQQMPENQTKYW 157
D H WLDP N + IA + PE+ +Y
Sbjct 140 AHGSGDHDHAAEVAEEGHEHHHHGEYDLHFWLDPQNGKILAADIAKTLGESDPEHAAQYE 199
Query 158 NNARKFAREMLQAAQPYNTTASP---KPYWSYHDAYQYLERALNLKFAGAMTDDPHVAPT 214
NA+ + ++ + P KP+ +HDAYQY E +K AG++T P AP
Sbjct 200 KNAKAYGEKLDALTREVAAELKPVKDKPFIVFHDAYQYFENRFGMKAAGSITVSPEKAPG 259
Query 215 VAQIKYLND 223
A+I+ ++D
Sbjct 260 AARIQQIHD 268
>Q576K1 High-affinity zinc uptake system protein ZnuA [Brucella
abortus biovar 1 (strain 9-941)]
Length=334
Score = 87.4 bits (215), Expect = 1e-23
Identities = 66/249 (27%), Positives = 105/249 (42%), Gaps = 43/249 (17%)
Query 18 SAVSWAQGPLVVSTHPLYLIAKEVTQGVEEPQLLL-GNQSGHDIQLTPAHRKAIQDASLV 76
S+++ + +VVS PL+ I V QGV +P+L++ G S H L P+ +AI+ A ++
Sbjct 20 SSLAGEREGVVVSIKPLHSIVSAVMQGVGKPKLIVQGAGSEHVYSLKPSDAEAIEHAKVI 79
Query 77 VWLGKTHEAPLAKLLDNNPKAISIINSQIVTGLPQRTTR-GVPIP--------------- 120
W G + E L K +D + ++ GL + R G P
Sbjct 80 FWAGPSMETFLDKPIDTLGEGAKVVALGDAKGLTKLKFREGGPFEAHDHGHGGSHEEEHD 139
Query 121 -----------------------NTVDTHVWLDPNNAIRIGFFIAALRSQQMPENQTKYW 157
D H WLDP N + IA + PE+ +Y
Sbjct 140 AHGSGDHDHAAEVAEEGHEHHHHGEYDLHFWLDPQNGKILAADIAKTLGESDPEHAAQYE 199
Query 158 NNARKFAREMLQAAQPYNTTASP---KPYWSYHDAYQYLERALNLKFAGAMTDDPHVAPT 214
NA+ + ++ + P KP+ +HDAYQY E +K AG++T P AP
Sbjct 200 KNAKAYGEKLDALTREVAAELKPVKDKPFIVFHDAYQYFENRFGMKAAGSITVSPEKAPG 259
Query 215 VAQIKYLND 223
A+I+ ++D
Sbjct 260 AARIQQIHD 268
>Q2YJH5 High-affinity zinc uptake system protein ZnuA [Brucella
abortus (strain 2308)]
Length=334
Score = 87.4 bits (215), Expect = 1e-23
Identities = 66/249 (27%), Positives = 105/249 (42%), Gaps = 43/249 (17%)
Query 18 SAVSWAQGPLVVSTHPLYLIAKEVTQGVEEPQLLL-GNQSGHDIQLTPAHRKAIQDASLV 76
S+++ + +VVS PL+ I V QGV +P+L++ G S H L P+ +AI+ A ++
Sbjct 20 SSLAGEREGVVVSIKPLHSIVSAVMQGVGKPKLIVQGAGSEHVYSLKPSDAEAIEHAKVI 79
Query 77 VWLGKTHEAPLAKLLDNNPKAISIINSQIVTGLPQRTTR-GVPIP--------------- 120
W G + E L K +D + ++ GL + R G P
Sbjct 80 FWAGPSMETFLDKPIDTLGEGAKVVALGDAKGLTKLKFREGGPFEAHDHGHGGSHEEEHD 139
Query 121 -----------------------NTVDTHVWLDPNNAIRIGFFIAALRSQQMPENQTKYW 157
D H WLDP N + IA + PE+ +Y
Sbjct 140 AHGSGDHDHAAEVAEEGHEHHHHGEYDLHFWLDPQNGKILAADIAKTLGESDPEHAAQYE 199
Query 158 NNARKFAREMLQAAQPYNTTASP---KPYWSYHDAYQYLERALNLKFAGAMTDDPHVAPT 214
NA+ + ++ + P KP+ +HDAYQY E +K AG++T P AP
Sbjct 200 KNAKAYGEKLDALTREVAAELKPVKDKPFIVFHDAYQYFENRFGMKAAGSITVSPEKAPG 259
Query 215 VAQIKYLND 223
A+I+ ++D
Sbjct 260 AARIQQIHD 268
>Q9RPX0 High-affinity zinc uptake system protein ZnuA [Haemophilus
ducreyi (strain 35000HP / ATCC 700724)]
Length=310
Score = 84.7 bits (208), Expect = 9e-23
Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 29/250 (12%)
Query 14 VTLVSAVSWAQGPLVVSTHPLYLIAKEVTQGVEEPQLLLG-NQSGHDIQLTPAHRKAIQD 72
+ ++ + A ++ S PL IA +T GV E ++LL S HD L P+ + ++
Sbjct 9 LAMLGVTTVANADVLTSIKPLGFIANAITDGVTETKVLLPVTASPHDYSLKPSDIEKLKS 68
Query 73 ASLVVWLGKTHEAPLAKLLDNNPKAISIINSQIVTGLPQRTTRGVPIPNT---------- 122
A LVVW+G EA L K +D PK ++ + V G+ +
Sbjct 69 AQLVVWVGDGLEAFLEKSIDKLPKE-KVLRLEDVPGIKMIVDATKKKDHDHHDHDHDHDH 127
Query 123 -------------VDTHVWLDPNNAIRIGFFIAALRSQQMPENQTKYWNNARKFAREMLQ 169
D H+W P + IA + Q+PE + K N F +
Sbjct 128 DHDHEHIHGHHHDKDWHIWFSPEASQLAAEQIAERLTAQLPEKKAKIAENLAAFKANLAD 187
Query 170 AAQPYNT---TASPKPYWSYHDAYQYLERALNLKFAGAMTDDPHVAPTVAQIKYLNDNRP 226
+ K Y+++HDAY Y ERA L G+ T +P +AP + + +N
Sbjct 188 KSNEITQQLQAVKDKGYYTFHDAYGYFERAYGLNSLGSFTINPTIAPGAKTLNAIKENIA 247
Query 227 SER-MCLMAE 235
+ + CL AE
Sbjct 248 AHKAQCLFAE 257
>P39172 High-affinity zinc uptake system protein ZnuA [Escherichia
coli (strain K12)]
Length=310
Score = 80.5 bits (197), Expect = 3e-21
Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 20/250 (8%)
Query 6 LRFALMCFVTLVSAVSWAQGPLVVSTHPLYLIAKEVTQGVEEPQLLLGN-QSGHDIQLTP 64
L FA + A A +V S P+ IA + GV E ++LL + S HD L P
Sbjct 7 LLFAALSAALWGGATQAADAAVVASLKPVGFIASAIADGVTETEVLLPDGASEHDYSLRP 66
Query 65 AHRKAIQDASLVVWLGKTHEAPLAKLLDNNP--KAISIINSQIVTGLPQRTTRGVPIPN- 121
+ K +Q+A LVVW+G EA + K + P K ++I + V L ++ G +
Sbjct 67 SDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQVTIAQLEDVKPLLMKSIHGDDDDHD 126
Query 122 ------------TVDTHVWLDPNNAIRIGFFIAALRSQQMPENQTKYWNNARKFAREMLQ 169
+ H+WL P A I + MP+++ K N + F ++
Sbjct 127 HAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQLAS 186
Query 170 AAQPYNTTASP---KPYWSYHDAYQYLERALNLKFAGAMTDDPHVAPTVAQIKYLNDNRP 226
+P K Y+ +HDAY Y E+ L G T +P + P ++ +
Sbjct 187 TETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLV 246
Query 227 SER-MCLMAE 235
++ C+ AE
Sbjct 247 EQKATCVFAE 256
Lambda K H a alpha
0.321 0.132 0.404 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 423612
Database: f74aed86be78fb2d7b096a536a4677d9.SwissProt.fasta
Posted date: May 19, 2024 9:54 PM
Number of letters in database: 1,956
Number of sequences in database: 6
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
