BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 3254ab16e521d3ce2224cddac4dc72fc.SwissProt.fasta
11 sequences; 5,069 total letters
Query= ACIAD0199
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
H9N291 Oxidoreductase NdmD [Pseudomonas putida] 94.4 9e-26
Q9SK50 Protein TIC 55, chloroplastic [Arabidopsis thaliana] 80.5 5e-21
O49931 Protein TIC 55, chloroplastic [Pisum sativum] 77.8 5e-20
Q44256 3-chlorobenzoate-3,4-dioxygenase oxygenase subunit [Comamo... 72.4 3e-18
P94679 Toluene-4-sulfonate monooxygenase system iron-sulfur subun... 67.4 1e-16
H9N289 Methylxanthine N1-demethylase NdmA [Pseudomonas putida] 67.0 2e-16
F7J184 Cholesterol 7-desaturase nvd [Xenopus laevis] 65.1 9e-16
O05616 Vanillate O-demethylase oxygenase subunit [Pseudomonas sp.... 63.9 2e-15
Q9AHG3 Putative toluene-4-sulfonate monooxygenase system iron-sul... 63.5 3e-15
Q9ZWM5 Chlorophyllide a oxygenase, chloroplastic [Chlamydomonas r... 60.1 5e-14
Q6DHJ3 Cholesterol 7-desaturase nvd [Danio rerio] 59.3 9e-14
>H9N291 Oxidoreductase NdmD [Pseudomonas putida]
Length=588
Score = 94.4 bits (233), Expect = 9e-26
Identities = 43/108 (40%), Positives = 56/108 (52%), Gaps = 0/108 (0%)
Query 2 IQQWIPILPSVLLEPKEVIQAFVQDIEVVIWRSEQGRVQIWENRCPHRSVRLSLGEVHGE 61
+ QW PI + L + V A + E+ IWR + G V WENRCPHR +RL+LG G
Sbjct 6 VNQWFPIATTEDLPKRHVFHATLLGQEMAIWRDDSGSVNAWENRCPHRGLRLTLGANTGN 65
Query 62 SLICAYHGWQFSADHGQCQRIPAQPTQRVPSTLCSTTYAVAEHDGMIW 109
L C YHGW + + G C +PA P+ T+ V E G IW
Sbjct 66 ELRCQYHGWTYESGTGGCTFVPAHRDAPPPNAARVNTFPVREKHGFIW 113
>Q9SK50 Protein TIC 55, chloroplastic [Arabidopsis thaliana]
Length=539
Score = 80.5 bits (197), Expect = 5e-21
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 2/108 (2%)
Query 3 QQWIPILPSVLLEPKEVIQAFVQDIEVVIWRSEQGRVQIWENRCPHRSVRLSLGEVHGES 62
++W P+ + + + V D ++V+++ +G ++ +E+RCPHR +LS G++
Sbjct 86 EEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGR 145
Query 63 LICAYHGWQFSADHGQCQRIPAQP-TQRVPSTLCSTTYAVAEHDGMIW 109
L C YHGWQF + G+C +IP P + ++P C TY V + G++W
Sbjct 146 LECLYHGWQFEGE-GKCVKIPQLPASAKIPKAACVKTYEVKDSQGVVW 192
Score = 18.1 bits (35), Expect = 3.0
Identities = 14/37 (38%), Positives = 18/37 (49%), Gaps = 6/37 (16%)
Query 6 IPILPSVLLEPKEVIQAFVQDIEVVIWRSEQGRVQIW 42
IP LP+ PK A V+ EV + QG V +W
Sbjct 164 IPQLPASAKIPKA---ACVKTYEV---KDSQGVVWVW 194
>O49931 Protein TIC 55, chloroplastic [Pisum sativum]
Length=553
Score = 77.8 bits (190), Expect = 5e-20
Identities = 36/108 (33%), Positives = 60/108 (56%), Gaps = 2/108 (2%)
Query 3 QQWIPILPSVLLEPKEVIQAFVQDIEVVIWRSEQGRVQIWENRCPHRSVRLSLGEVHGES 62
++W P+ + + + V D +V++R + Q +E+RCPHR +LS G++
Sbjct 101 EEWYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGNDQFQCYEDRCPHRLAKLSEGQLIDGR 160
Query 63 LICAYHGWQFSADHGQCQRIPAQPTQ-RVPSTLCSTTYAVAEHDGMIW 109
L C YHGWQF + G+C +IP P ++P + C TY V + G++W
Sbjct 161 LECLYHGWQFEGE-GKCVKIPQLPADAKIPKSACVKTYEVRDSQGVLW 207
Score = 19.6 bits (39), Expect = 0.98
Identities = 15/40 (38%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Query 6 IPILPSVLLEPKEVIQAFVQDIEVVIWRSEQGRVQIWENR 45
IP LP+ PK A V+ EV R QG + +W +R
Sbjct 179 IPQLPADAKIPKS---ACVKTYEV---RDSQGVLWVWMSR 212
>Q44256 3-chlorobenzoate-3,4-dioxygenase oxygenase subunit [Comamonas
testosteroni]
Length=432
Score = 72.4 bits (176), Expect = 3e-18
Identities = 39/111 (35%), Positives = 61/111 (55%), Gaps = 3/111 (3%)
Query 1 MIQQWIPILPSVLLEPK-EVIQAFVQDIEVVIWRSEQGRVQIWENRCPHRSVRLSLGEVH 59
M + WIP L S LE ++ + ++V +R G V + ++RCPHR V L +G V
Sbjct 23 MREYWIPALKSTELEAGGSPVRLLLLGEKLVAFREPSGAVGVMDSRCPHRGVSLFMGRVE 82
Query 60 GESLICAYHGWQFSADHGQCQRIPA-QPTQRVPSTLCSTTYAVAEHDGMIW 109
L C YHGW+FSA+ G+C +P+ +P +++ Y V E G++W
Sbjct 83 EGGLRCVYHGWKFSAE-GKCVDMPSVRPEDEFKNSVRVARYPVKEMAGVVW 132
Score = 16.5 bits (31), Expect = 9.1
Identities = 8/24 (33%), Positives = 11/24 (46%), Gaps = 0/24 (0%)
Query 103 EHDGMIWFGGHSHENQSLDMPQSS 126
EH M +F + + LD P S
Sbjct 267 EHTMMFFFRWTGSKAKRLDTPLKS 290
>P94679 Toluene-4-sulfonate monooxygenase system iron-sulfur subunit
TsaM1 [Comamonas testosteroni]
Length=347
Score = 67.4 bits (163), Expect = 1e-16
Identities = 32/81 (40%), Positives = 47/81 (58%), Gaps = 3/81 (4%)
Query 29 VVIWRSEQGRVQIWENRCPHRSVRLSLGEVHGESLICAYHGWQFSADHGQCQRIPAQPTQ 88
V+++R QGRV ENRC HRS L +G G+ + C YHG +F+ G C IP Q +
Sbjct 31 VLLYRDTQGRVVALENRCCHRSAPLHIGRQEGDCVRCLYHGLKFNPS-GACVEIPGQ--E 87
Query 89 RVPSTLCSTTYAVAEHDGMIW 109
++P C +Y V E + ++W
Sbjct 88 QIPPKTCIKSYPVVERNRLVW 108
>H9N289 Methylxanthine N1-demethylase NdmA [Pseudomonas putida]
Length=351
Score = 67.0 bits (162), Expect = 2e-16
Identities = 30/66 (45%), Positives = 38/66 (58%), Gaps = 1/66 (2%)
Query 44 NRCPHRSVRLSLGEVHGESLICAYHGWQFSADHGQCQRIPAQPTQRVPSTLCSTTYAVAE 103
+RC HRS +LSLG V G L C YHGWQ+ HG CQ +PA P +P+ + E
Sbjct 60 DRCAHRSAKLSLGTVSGNRLQCPYHGWQYDT-HGACQLVPACPNSPIPNKAKVDRFDCEE 118
Query 104 HDGMIW 109
G+IW
Sbjct 119 RYGLIW 124
>F7J184 Cholesterol 7-desaturase nvd [Xenopus laevis]
Length=454
Score = 65.1 bits (157), Expect = 9e-16
Identities = 35/110 (32%), Positives = 58/110 (53%), Gaps = 3/110 (3%)
Query 5 WIPILPSVLLEPKEVIQAFVQDIEVVIWRSEQGRVQIWENRCPHRSVRLSLG-EVHGESL 63
W L S LL P V + ++ ++R+ +G+V + + CPH L++G +V G+ +
Sbjct 117 WYRALDSHLLPPGTVQDCTLLGEQLAVYRTLEGKVYVVDAYCPHLGANLAVGGKVVGDCI 176
Query 64 ICAYHGWQFSADHGQCQRIPAQPTQRVPSTLCSTTYAVAEHDGMIWFGGH 113
C +HGWQF + G+C RIP ++VP T E +GM++ H
Sbjct 177 ECPFHGWQFRGEDGKCTRIPY--AEKVPDFAKIKTRPSCELNGMVFVWYH 224
>O05616 Vanillate O-demethylase oxygenase subunit [Pseudomonas
sp. (strain HR199 / DSM 7063)]
Length=354
Score = 63.9 bits (154), Expect = 2e-15
Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 4/82 (5%)
Query 28 EVVIWRSEQGRVQIWENRCPHRSVRLSLGEVHGESLICAYHGWQFSADHGQCQRIPAQPT 87
++V +R +GRV E+ CPHR LSLG V LIC YHG + + + A P
Sbjct 29 KIVFYRGPEGRVAAVEDFCPHRGAPLSLGFVRDGKLICGYHGLEMGCE----GKTLAMPG 84
Query 88 QRVPSTLCSTTYAVAEHDGMIW 109
QRV C +YAV E G IW
Sbjct 85 QRVQGFPCIKSYAVEERYGFIW 106
>Q9AHG3 Putative toluene-4-sulfonate monooxygenase system iron-sulfur
subunit TsaM2 [Comamonas testosteroni]
Length=346
Score = 63.5 bits (153), Expect = 3e-15
Identities = 32/93 (34%), Positives = 52/93 (56%), Gaps = 4/93 (4%)
Query 17 KEVIQAFVQDIEVVIWRSEQGRVQIWENRCPHRSVRLSLGEVHGESLICAYHGWQFSADH 76
K + + F+ + +VV++R+ G E+RC HR LSLG+V + C YHG F+A
Sbjct 19 KPLARTFLNE-KVVLFRTHDGHAVALEDRCCHRLAPLSLGDVEDAGIRCRYHGMVFNAS- 76
Query 77 GQCQRIPAQPTQRVPSTLCSTTYAVAEHDGMIW 109
G C IP Q +++P +C + + E G++W
Sbjct 77 GACVEIPGQ--EQIPPGMCVRRFPLVERHGLLW 107
>Q9ZWM5 Chlorophyllide a oxygenase, chloroplastic [Chlamydomonas
reinhardtii]
Length=645
Score = 60.1 bits (144), Expect = 5e-14
Identities = 38/106 (36%), Positives = 54/106 (51%), Gaps = 6/106 (6%)
Query 5 WIPILPSVLLEPKEVIQAFVQDIEV-VIWRSEQGRVQIWENRCPHRSVRLSLGEVHGESL 63
W P S L PK+ + F E V++R E+G+ + C HR LSLG+V +
Sbjct 305 WYPAEFSARL-PKDTLVPFELFGEPWVMFRDEKGQPSCIRDECAHRGCPLSLGKVVEGQV 363
Query 64 ICAYHGWQFSADHGQCQRIPAQPTQRVPSTLCSTTYAVAEHDGMIW 109
+C YHGW+F+ D G C ++P+ P R + AE DG IW
Sbjct 364 MCPYHGWEFNGD-GACTKMPSTPFCR---NVGVAALPCAEKDGFIW 405
Score = 17.3 bits (33), Expect = 5.3
Identities = 10/41 (24%), Positives = 18/41 (44%), Gaps = 0/41 (0%)
Query 5 WIPILPSVLLEPKEVIQAFVQDIEVVIWRSEQGRVQIWENR 45
W+ +P V + K+ Q V+ GR++ W+ R
Sbjct 67 WLDSVPRVRVRTKDSRQLDDMLELAVLNERLAGRLEPWQAR 107
>Q6DHJ3 Cholesterol 7-desaturase nvd [Danio rerio]
Length=460
Score = 59.3 bits (142), Expect = 9e-14
Identities = 33/109 (30%), Positives = 54/109 (50%), Gaps = 5/109 (5%)
Query 5 WIPILPSVLLEPKEVIQAFVQDIEVVIWRSEQGRVQIWENRCPHRSVRLSLG-EVHGESL 63
W +L S +LE +V V +V ++R + G+ + + CPH L++G V G +
Sbjct 123 WYRVLDSHMLERGDVKSVTVLGQQVAVFRGQDGKAYVVDAYCPHLGANLAVGGRVVGGCI 182
Query 64 ICAYHGWQFSADHGQCQRIPAQPTQRVPSTLCSTTYAVAEHDG--MIWF 110
C +HGWQF G+C +IP +VP + E +G ++WF
Sbjct 183 ECPFHGWQFRGVDGRCVKIPY--ADKVPEFAKVRCWPSCEINGLVLVWF 229
Lambda K H a alpha
0.323 0.133 0.438 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 799704
Database: 3254ab16e521d3ce2224cddac4dc72fc.SwissProt.fasta
Posted date: May 8, 2024 1:15 PM
Number of letters in database: 5,069
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
