BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 73578dd59ab0493f206a83aec5d42af5.SwissProt.fasta
14 sequences; 6,450 total letters
Query= ACIAD0223
Length=446
Score E
Sequences producing significant alignments: (Bits) Value
P76350 Shikimate transporter [Escherichia coli (strain K12)] 594 0.0
P0DPR5 Fosfomycin resistance protein AbaF [Acinetobacter baumanni... 286 7e-96
P44699 Putative metabolite transport protein HI_0418 [Haemophilus... 260 2e-85
P44610 Putative metabolite transport protein HI_0281 [Haemophilus... 253 6e-83
P37643 Inner membrane metabolite transport protein YhjE [Escheric... 253 6e-83
A4QH18 Shikimate transporter [Corynebacterium glutamicum (strain R)] 239 2e-77
Q47421 Glycine betaine/proline/ectoine/pipecolic acid transporter... 228 2e-72
P40862 Proline/betaine transporter [Salmonella typhimurium (strai... 225 2e-71
P0C0L8 Proline/betaine transporter [Escherichia coli O157:H7] 225 2e-71
P0C0L7 Proline/betaine transporter [Escherichia coli (strain K12)] 225 2e-71
P77228 Putative transporter YdfJ [Escherichia coli (strain K12)] 219 5e-70
P16482 Citrate-proton symporter [Klebsiella pneumoniae] 211 1e-66
P0AEX3 Alpha-ketoglutarate permease [Escherichia coli (strain K12)] 202 2e-63
Q79VC4 Ectoine/proline transporter ProP [Corynebacterium glutamic... 193 2e-59
>P76350 Shikimate transporter [Escherichia coli (strain K12)]
Length=438
Score = 594 bits (1531), Expect = 0.0
Identities = 293/433 (68%), Positives = 348/433 (80%), Gaps = 4/433 (1%)
Query 1 MASNLSSSVPSNE----KRARKAAFSSFIGAVVDWYDFLLYGIVAALIFNQQFFPSISPA 56
M S L S+ P RAR+AA SF GAVVDWYDFLLYGI AAL+FN++FFP +SPA
Sbjct 1 MDSTLISTRPDEGTLSLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA 60
Query 57 MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKKMLFLTVFLMGTATILIGLLPNFEAI 116
MGTLAAFATFGVGFLFRPLGGV+FGHFGDRLGRK+ML LTV++MG AT LIG+LP+F I
Sbjct 61 MGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTI 120
Query 117 GWWAPVLLVLLRAIQGFAVGGEWGGAALMAVENAPAHRKAFYSSGVQIGYGVGLMLATGS 176
GWWAP+LLV LRAIQGFAVGGEWGGAAL++VE+AP ++KAFYSSGVQ+GYGVGL+L+TG
Sbjct 121 GWWAPILLVTLRAIQGFAVGGEWGGAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGL 180
Query 177 VSLIIYIFGQDGFADWAWRIPFLASIILVLFALWVRGGQDESHEFEQEVIKKQIAPVKIP 236
VSLI + + F W WRIPFL SI+LVL ALWVR G +ES EFEQ+ + A +IP
Sbjct 181 VSLISMMTTDEQFLSWGWRIPFLFSIVLVLGALWVRNGMEESAEFEQQQHYQAAAKKRIP 240
Query 237 LFEAVRQNPKGFFYIIALRLAELLTMYLVTTFALNYSTKNLGMSSSLFLHIGLMVGAISC 296
+ EA+ ++P F IIALRL ELLTMY+VT FALNYST+N+G+ LFL+IGL+VG +SC
Sbjct 241 VIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNMGLPRELFLNIGLLVGGLSC 300
Query 297 LTIPFFAHISDRFGRRRMCVIGGLIGAICAFPFFFALESGSTFWIVLFAILLANLSHDMV 356
LTIP FA ++DRFGRRR+ + G LIG + AFPFF ALE+ S FWIV F+I+LAN++HDMV
Sbjct 301 LTIPCFAWLADRFGRRRVYITGTLIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMV 360
Query 357 VSVHQPIFTELFGASYRYSGAGVGYQVASIVGGGFTPFIATGLITLGHGHWQYVAIYLTI 416
V V QP+FTE+FGASYRYSGAGVGYQVAS+VGGGFTPFIA LIT G+W VAIYL
Sbjct 361 VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALITYFAGNWHSVAIYLLA 420
Query 417 GCLLTTWVAARMK 429
GCL++ A MK
Sbjct 421 GCLISAMTALLMK 433
>P0DPR5 Fosfomycin resistance protein AbaF [Acinetobacter baumannii
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755
/ 5377)]
Length=429
Score = 286 bits (732), Expect = 7e-96
Identities = 147/386 (38%), Positives = 228/386 (59%), Gaps = 3/386 (1%)
Query 17 RKAAFSSFIGAVVDWYDFLLYGIVAALIFNQQFFPSISPAM-GTLAAFATFGVGFLFRPL 75
+K +S +G+V +WY+F LYG +AL+F + FF A+ G LAAFA + VGFL RPL
Sbjct 6 KKVVAASMVGSVAEWYEFFLYGTASALVFGELFFQQTGNAIDGILAAFALYAVGFLARPL 65
Query 76 GGVVFGHFGDRLGRKKMLFLTVFLMGTATILIGLLPNFEAIGWWAPVLLVLLRAIQGFAV 135
GG+VFGH+GD++GRKK+L +++ ++G T L+G +P F IG+WAP LLV+LR IQGFA
Sbjct 66 GGLVFGHYGDKIGRKKLLQISLIIVGITTFLMGCIPTFHQIGYWAPTLLVILRLIQGFAF 125
Query 136 GGEWGGAALMAVENAPAHRKAFYSSGVQIGYGVGLMLATGSVSLIIYIFGQDGFADWAWR 195
GGEWGGA ++ E++P R+ +++S Q G +G ++AT + L+ + F DW WR
Sbjct 126 GGEWGGAVILVSEHSPDDRRGYWASWPQTGVPLGNLVATLVLLLLSKNLSPEQFLDWGWR 185
Query 196 IPFLASIILVLFALWVRGGQDESHEFEQEVIKKQ-IAPVKIPLFEAVRQNPKGFFYIIAL 254
F S ++VL LW+R D++ F++ K+Q + ++ + E ++ + K I
Sbjct 186 CAFWFSAVVVLIGLWIRKNVDDAEVFKEAQAKQQLLEKQQLGIIEVLKYHKKSVIAGIGA 245
Query 255 RLAELLTMYLVTTFALNYSTKNLGMSSSLFLHIGLMVGAISCLTIPFFAHISDRFGRRRM 314
R AE + Y+V TF+++Y + +S L + I IPF H+SD FGR+ +
Sbjct 246 RFAENILYYMVVTFSISYLKLVVHKDTSQILLLMFGAHLIHFFIIPFMGHLSDIFGRKPI 305
Query 315 CVIGGLIGAICAFPFFFALESGSTFWIVLFAILLANLSHDMVVSVHQPIFTELFGASYRY 374
+IG ++ A F F +++G+ W+++ AI+L M S + + TELF RY
Sbjct 306 YLIGAVLTAFWGFVGFPLMDTGND-WLIMLAIVLGLFIESMTYSPYSALMTELFPTHIRY 364
Query 375 SGAGVGYQVASIVGGGFTPFIATGLI 400
+ YQVA I+ G P IA L+
Sbjct 365 TALSFCYQVAPIMAGSLAPLIALTLL 390
>P44699 Putative metabolite transport protein HI_0418 [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=447
Score = 260 bits (664), Expect = 2e-85
Identities = 156/444 (35%), Positives = 241/444 (54%), Gaps = 27/444 (6%)
Query 9 VPSNEKRARKAAFSSFIGAVVDWYDFLLYGIVAALIFNQQFFPSISPAMGTLAAFATFGV 68
V + + ++ A ++ +G ++++D +Y + A L+FN QFF ++ P G +AA +T +
Sbjct 13 VMNTQNSLKQVATATMVGTAIEYFDNYIYAMAAVLVFNHQFFHAVDPLSGQIAALSTLAL 72
Query 69 GFLFRPLGGVVFGHFGDRLGRKKMLFLTVFLMGTATILIGLLPNFEAIGWWAPVLLVLLR 128
F+ RPLG ++FGHFGDR GRK +++ LMG +T++IGLLP +++IG WA +LL L R
Sbjct 73 TFIARPLGAILFGHFGDRFGRKNTFVMSLLLMGISTVVIGLLPTYDSIGIWATILLCLCR 132
Query 129 AIQGFAVGGEWGGAALMAVENAPAHRKAFYSSGVQIGYGVGLMLATGSVSLIIYIFGQDG 188
QG +GGEWGGAAL+AVENAP ++ +Y + Q+G +GL+LA G I IFGQ+
Sbjct 133 IGQGIGLGGEWGGAALVAVENAPEGKRGWYGTFPQLGAPLGLLLANGVFLGITAIFGQEA 192
Query 189 FADWAWRIPFLASIILVLFALWVRGGQDESHEFEQEVIKKQIAPVKIPLFEAVRQNPKGF 248
+WAWRIPFL+S+ILV L+VR E+ F + K + P ++P+ E V + K F
Sbjct 193 MTEWAWRIPFLSSVILVAIGLYVRLKLTEAPIFLAALNKPK--PKRLPMLEVVTTHFKPF 250
Query 249 FYIIALRLAELLTMYLVTTFALNYS-----------TKNLGMSSSLFLHIGLMVGAIS-C 296
F + + +A + Y++ F+ Y+ LG S +F + LM A+S
Sbjct 251 FLGMLVCIAGYVLFYIMIAFSQIYAKSAPTVSEAGYAMGLGFSPQIFTAL-LMASAVSLA 309
Query 297 LTIPFFAHISDRFGRRRMCVIGGLIGAICAFPFFFALESGST---FWIVLFAILLANLSH 353
+TI D+ GRR + + AI LE+G+T FW + + L + +
Sbjct 310 ITIAASGKYIDKIGRRTWLIWTTVGVAIFGLSLPLFLENGTTTSLFWFLFIGMGLIGMGY 369
Query 354 DMVVSVHQPIFTELFGASYRYSGAGVGYQVASIVGGGFTPFIATGLITLGHGHWQYVAIY 413
+ S ELF RYSGA + Y +A + G IA L H + V IY
Sbjct 370 GPLAS----FLPELFPTHARYSGASLTYNIAGLFGASVAAIIALPL--NAHYGLKGVGIY 423
Query 414 LTIGCLLT---TWVAARMKAQVQS 434
LT+ +L+ W + K ++ S
Sbjct 424 LTLNAVLSLVGLWFISETKDKLLS 447
>P44610 Putative metabolite transport protein HI_0281 [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=438
Score = 253 bits (646), Expect = 6e-83
Identities = 153/422 (36%), Positives = 232/422 (55%), Gaps = 30/422 (7%)
Query 18 KAAFSSFIGAVVDWYDFLLYGIVAALIFNQQFFPSISPAMGTLAAFATFGVGFLFRPLGG 77
K A +S +G ++++D+ +Y A L+FN QFF S P L + +T + F RP+G
Sbjct 11 KVALASMVGTAIEFFDYYIYAAAAVLVFNTQFFHSDDPLSNDLLSLSTLALAFFARPIGS 70
Query 78 VVFGHFGDRLGRKKMLFLTVFLMGTATILIGLLPNFEAIGWWAPVLLVLLRAIQGFAVGG 137
+FGHFGD++GRKK L ++ LMG +T++IGLLPN+ IG WAP+LL + R QG +GG
Sbjct 71 ALFGHFGDKIGRKKTLVASLVLMGGSTVVIGLLPNYAQIGIWAPILLCVCRVGQGIGLGG 130
Query 138 EWGGAALMAVENAPAHRKAFYSSGVQIGYGVGLMLATGSVSLIIYIFGQDGFADWAWRIP 197
EWGGAAL+A ENAP ++A+Y + Q+G +GL +A G+ L+ Y+ G + +WAWRIP
Sbjct 131 EWGGAALVATENAPEGKRAWYGTFPQLGAPIGLFVANGTFFLVSYLLGHNALVEWAWRIP 190
Query 198 FLASIILVLFALWVRGGQDESHEF--EQEVIKKQIAPVKIPLFEAVRQNPKGFFYIIALR 255
F++SI+LV L+VR ESH F ++ KK APV + + ++ G F ++
Sbjct 191 FVSSILLVAVGLYVRLTLHESHVFVEAEQKGKKLNAPVSVVFTKHLKPMVIGTFIMV--- 247
Query 256 LAELLTMYLVTTFALNYS-----------TKNLGMSSSLFLHIGLMVGAISCLTIPFFAH 304
A Y++T FA YS LG+ ++ F + L+ + + I
Sbjct 248 -ATYSLFYIMTAFAQAYSRTAPKLSEAGYALGLGIPANTFTGLLLISAIVFGIFISISGF 306
Query 305 ISDRFGRRR----MCVIGGLIGAICAFPFFFALESGSTFWIVLFAILLANLS-HDMVVSV 359
+D+ GRR+ + + G++G A P F LE+G+ + +FA L+ ++ M
Sbjct 307 YADKIGRRKWLIWVTIAIGVLG--LAMPLF--LENGTP--VSVFAFLVIGMAIMGMTFGP 360
Query 360 HQPIFTELFGASYRYSGAGVGYQVASIVGGGFTPFIATGLITLGHGHWQYVAIYLTIGCL 419
+ ELF RYSGA + Y +ASI+G I+ I G V IYL I L
Sbjct 361 MAALLPELFPTEVRYSGASLAYNLASIIGATIAAMISL-KINASFG-VMGVGIYLAINAL 418
Query 420 LT 421
+T
Sbjct 419 MT 420
>P37643 Inner membrane metabolite transport protein YhjE [Escherichia
coli (strain K12)]
Length=440
Score = 253 bits (646), Expect = 6e-83
Identities = 147/390 (38%), Positives = 215/390 (55%), Gaps = 10/390 (3%)
Query 18 KAAFSSFIGAVVDWYDFLLYGIVAALIFNQQFFPSISPAMGTLAAFATFGVGFLFRPLGG 77
K +S IG ++++DF +Y A ++F FFP P TL + ATF + F+ RP+G
Sbjct 22 KVLVASLIGTAIEFFDFYIYATAAVIVFPHIFFPQGDPTAATLQSLATFAIAFVARPIGS 81
Query 78 VVFGHFGDRLGRKKMLFLTVFLMGTATILIGLLPNFEAIGWWAPVLLVLLRAIQGFAVGG 137
VFGHFGDR+GRK L ++ MG +T++IGLLP + IG +AP+LL L R QG +GG
Sbjct 82 AVFGHFGDRVGRKATLVASLLTMGISTVVIGLLPGYATIGIFAPLLLALARFGQGLGLGG 141
Query 138 EWGGAALMAVENAPAHRKAFYSSGVQIGYGVGLMLATGSVSLIIYIFGQDGFADWAWRIP 197
EWGGAAL+A ENAP ++A Y S Q+G +G A G+ L+ ++ + F W WR+P
Sbjct 142 EWGGAALLATENAPPRKRALYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVP 201
Query 198 FLASIILVLFALWVRGGQDESHEFEQEVIKKQIAPVKIPLFEAVRQNPKGFFYIIALRLA 257
F+ S +LV+ L+VR ES FE+ + K VKIPL + ++ + + LA
Sbjct 202 FIFSAVLVIIGLYVRVSLHESPVFEK--VAKAKKQVKIPLGTLLTKHVRVTVLGTFIMLA 259
Query 258 ELLTMYLVTTFALNYSTK----NLGMSSSLFLHIGLMVGAISCLTIPFFAHISDRFGRRR 313
Y++T +++ +ST LG+ + L + +M + +P ++D FGRR+
Sbjct 260 TYTLFYIMTVYSMTFSTAAAPVGLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRK 319
Query 314 -MCVIGGLIGAICAFPFFFALESGSTFWIVLFAILLANLS-HDMVVSVHQPIFTELFGAS 371
M +I LI F F L SG+ I++FA LL LS + + ELF
Sbjct 320 SMVIITTLIILFALFAFNPLLGSGNP--ILVFAFLLLGLSLMGLTFGPMGALLPELFPTE 377
Query 372 YRYSGAGVGYQVASIVGGGFTPFIATGLIT 401
RY+GA Y VASI+G P+IA L T
Sbjct 378 VRYTGASFSYNVASILGASVAPYIAAWLQT 407
Score = 18.9 bits (37), Expect = 4.9
Identities = 10/39 (26%), Positives = 15/39 (38%), Gaps = 0/39 (0%)
Query 241 VRQNPKGFFYIIALRLAELLTMYLVTTFALNYSTKNLGM 279
VR F Y +A L + Y+ NY +G+
Sbjct 378 VRYTGASFSYNVASILGASVAPYIAAWLQTNYGLGAVGL 416
>A4QH18 Shikimate transporter [Corynebacterium glutamicum (strain
R)]
Length=450
Score = 239 bits (609), Expect = 2e-77
Identities = 141/411 (34%), Positives = 231/411 (56%), Gaps = 8/411 (2%)
Query 15 RARKAAFSSFIGAVVDWYDFLLYGIVAALIFNQQFFPSISPAMGTLAAFATFGVGFLFRP 74
+A++AA S+F+G+ +++YDF +YG AAL+F+ FFP A L + +T GV ++ RP
Sbjct 31 QAKRAALSAFLGSTLEYYDFFIYGSAAALVFSHVFFPE-GGANSVLLSISTLGVAYVARP 89
Query 75 LGGVVFGHFGDRLGRKKMLFLTVFLMGTATILIGLLPNFEAIGWWAPVLLVLLRAIQGFA 134
G V+FGH GD +GR+K L + +F MG +T+ IGLLP + +G AP++LV+LR +QG +
Sbjct 90 AGAVLFGHLGDTIGRRKTLMIILFTMGLSTLAIGLLPTYGQVGILAPIMLVVLRLLQGLS 149
Query 135 VGGEWGGAALMAVENAPAHRKAFYSSGVQIGYGVGLMLATGSVSLIIYIFGQDGFADWAW 194
GGE GAA +++E+AP R+ FYSS G G++L++ V + I + W W
Sbjct 150 AGGESPGAAALSMEHAPQRRRGFYSSFTISGVMFGIVLSS-VVFIPIAALPDEQLFSWGW 208
Query 195 RIPFLASIILVLFALWVRGGQDESHEFEQEVIKKQIAPVKIPLFEAVRQNPKGFFYIIAL 254
RIPF+ SIIL ALW+R +ES FE+EV + ++ + P+ E + + F ++
Sbjct 209 RIPFILSIILTGVALWIRRHLEESETFEEEVEEAKVP--ETPVVELFKNHWAAVFRVMFS 266
Query 255 RLAELLTMYLVTTFALNYSTKNLGMSSSLFLHIGLMVGAISCLTIPFFAHISDRFGRRRM 314
++ ++ F L Y+ + + + L + + ++ + PFF +SD+ GR+ +
Sbjct 267 STYAMMNT-ILNVFGLAYAVYS-DIERTTMLGVIAVANLMAVFSQPFFGLLSDKIGRKPV 324
Query 315 CVIGGLIGAICAFPFFFALESGSTFWIVLFAILLANLSHDMVVSVHQPIFTELFGASYRY 374
+ G L F FF A+ +G+ I L A++L L + + + F E F A RY
Sbjct 325 FITGALGAGGMMFVFFNAISTGNIAMIYLSAMVLMGLFYAAPNATYMAAFPEQFPAKVRY 384
Query 375 SGAGVGYQVASIVGGGFTPFIATGLITLGHGHWQYVAIYLTIGCLLTTWVA 425
SG +G + +V GF P +A L +WQ VA ++ +G + + VA
Sbjct 385 SGMAIGLMLGLLV-SGFAPAVAEMLTGGQAENWQPVA-WMCLGFAVLSAVA 433
>Q47421 Glycine betaine/proline/ectoine/pipecolic acid transporter
OusA [Dickeya dadantii (strain 3937)]
Length=501
Score = 228 bits (580), Expect = 2e-72
Identities = 138/440 (31%), Positives = 223/440 (51%), Gaps = 17/440 (4%)
Query 12 NEKRARKAAFSSFIGAVVDWYDFLLYGIVAALIFNQQFFPSISPAMGTLAAFATFGVGFL 71
++ R RKA ++ +G ++W+DF +YG VA + Q FFP P + +AA ATF V FL
Sbjct 20 DDGRLRKAITAAALGNAMEWFDFGVYGFVAYAL-GQVFFPGADPGVQMIAALATFSVPFL 78
Query 72 FRPLGGVVFGHFGDRLGRKKMLFLTVFLMGTATILIGLLPNFEAIGWWAPVLLVLLRAIQ 131
RPLGGV FG GD+ GR+K+L +T+ +M +T IGL+P++E IG WAP+LL+L + Q
Sbjct 79 IRPLGGVFFGALGDKYGRQKILAITIIIMSISTFCIGLIPSYERIGIWAPILLLLAKMAQ 138
Query 132 GFAVGGEWGGAALMAVENAPAHRKAFYSSGVQIGYGVGLMLATGSVSLIIYIFGQDGFAD 191
GF+VGGE+ GA++ E +P ++ F S + G G +L G V LI + G+ F
Sbjct 139 GFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTLIGEQAFLA 198
Query 192 WAWRIPFLASIILVLFALWVRGGQDESHEFEQEVIKKQ-------IAPVKIPLFEAVRQN 244
W WR+PF ++ L L L++R +E+ F Q V K + A + E +
Sbjct 199 WGWRLPFFLALPLGLIGLYLRHALEETPAFRQHVEKLEQNDRDGLKAGPGVSFREIATHH 258
Query 245 PKGFFYIIALRLAELLTMYLVTTFALNYSTKNLGMSSS--LFLHIGLMVGAISCLTIPFF 302
K I L +A +T Y++ T+ +Y + +L S + + + I +M+G + P
Sbjct 259 WKSLLVCIGLVIATNVTYYMLLTYMPSYLSHSLHYSENHGVLIIIAIMIGML--FVQPVM 316
Query 303 AHISDRFGRRRMCVIGGLIGAICAFPFFFALESGSTFWIVLFAILLANLSHDMVVSVHQP 362
+SDRFGR+ VIG + A P F + S ++ +L+ + + V
Sbjct 317 GLLSDRFGRKPFVVIGSVAMFFLAVPSFMLINS-DIIGLIFLGLLMLAVILNAFTGVMAS 375
Query 363 IFTELFGASYRYSGAGVGYQVASIVGGGFTPFIATGLITLGHGHWQ---YVAIYLTIGCL 419
LF RYS + + S++ G TP +A L+ + Y+ + IG L
Sbjct 376 TLPALFPTHIRYSALASAFNI-SVLIAGLTPTVAAWLVESSQNLYMPAYYLMVIAVIGLL 434
Query 420 LTTWVAARMKAQVQSVHPSS 439
++ ++ P++
Sbjct 435 TGLFMKETANKPLKGATPAA 454
>P40862 Proline/betaine transporter [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=500
Score = 225 bits (573), Expect = 2e-71
Identities = 128/398 (32%), Positives = 213/398 (54%), Gaps = 14/398 (4%)
Query 12 NEKRARKAAFSSFIGAVVDWYDFLLYGIVAALIFNQQFFPSISPAMGTLAAFATFGVGFL 71
++ + RKA ++ +G ++W+DF +YG VA + + FFP P++ +AA ATF V FL
Sbjct 19 DDGKLRKAITAASLGNAMEWFDFGVYGFVAYAL-GKVFFPGADPSVQMIAALATFSVPFL 77
Query 72 FRPLGGVVFGHFGDRLGRKKMLFLTVFLMGTATILIGLLPNFEAIGWWAPVLLVLLRAIQ 131
RPLGG+ FG GD+ GR+K+L +T+ +M +T IGL+P++ IG WAP+LL+L + Q
Sbjct 78 IRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQ 137
Query 132 GFAVGGEWGGAALMAVENAPAHRKAFYSSGVQIGYGVGLMLATGSVSLIIYIFGQDGFAD 191
GF+VGGE+ GA++ E +P ++ F S + G G +L G V LI I G++ F +
Sbjct 138 GFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEENFLE 197
Query 192 WAWRIPFLASIILVLFALWVRGGQDESHEFEQEVIKKQIAP-------VKIPLFEAVRQN 244
W WRIPF ++ L + L++R +E+ F+Q V K + K+ E ++
Sbjct 198 WGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKH 257
Query 245 PKGFFYIIALRLAELLTMYLVTTFALNYSTKNLGMSS--SLFLHIGLMVGAISCLTIPFF 302
+ I L +A +T Y++ T+ +Y + NL S + + I +M+G + P
Sbjct 258 WRSLLSCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGML--FVQPVM 315
Query 303 AHISDRFGRRRMCVIGGLIGAICAFPFFFALESGSTFWIVLFAILLANLSHDMVVSVHQP 362
+SDRFGRR ++G + A P F + S + ++ +L+ + + V
Sbjct 316 GLLSDRFGRRPFVIMGSIALFALAIPAFILINS-NVIGLIFAGLLMLAVILNCFTGVMAS 374
Query 363 IFTELFGASYRYSGAGVGYQVASIVGGGFTPFIATGLI 400
+F RYS + + S++ G TP +A L+
Sbjct 375 TLPAMFPTHIRYSALAAAFNI-SVLIAGLTPTLAAWLV 411
>P0C0L8 Proline/betaine transporter [Escherichia coli O157:H7]
Length=500
Score = 225 bits (573), Expect = 2e-71
Identities = 128/398 (32%), Positives = 213/398 (54%), Gaps = 14/398 (4%)
Query 12 NEKRARKAAFSSFIGAVVDWYDFLLYGIVAALIFNQQFFPSISPAMGTLAAFATFGVGFL 71
++ + RKA ++ +G ++W+DF +YG VA + + FFP P++ +AA ATF V FL
Sbjct 19 DDGKLRKAITAASLGNAMEWFDFGVYGFVAYAL-GKVFFPGADPSVQMVAALATFSVPFL 77
Query 72 FRPLGGVVFGHFGDRLGRKKMLFLTVFLMGTATILIGLLPNFEAIGWWAPVLLVLLRAIQ 131
RPLGG+ FG GD+ GR+K+L +T+ +M +T IGL+P+++ IG WAP+LL++ + Q
Sbjct 78 IRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQ 137
Query 132 GFAVGGEWGGAALMAVENAPAHRKAFYSSGVQIGYGVGLMLATGSVSLIIYIFGQDGFAD 191
GF+VGGE+ GA++ E +P ++ F S + G G +L G V LI I G+ F D
Sbjct 138 GFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLD 197
Query 192 WAWRIPFLASIILVLFALWVRGGQDESHEFEQEVIKKQIAP-------VKIPLFEAVRQN 244
W WRIPF ++ L + L++R +E+ F+Q V K + K+ E +
Sbjct 198 WGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKY 257
Query 245 PKGFFYIIALRLAELLTMYLVTTFALNYSTKNLGMSS--SLFLHIGLMVGAISCLTIPFF 302
+ I L +A +T Y++ T+ +Y + NL S + + I +M+G + P
Sbjct 258 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGML--FVQPVM 315
Query 303 AHISDRFGRRRMCVIGGLIGAICAFPFFFALESGSTFWIVLFAILLANLSHDMVVSVHQP 362
+SDRFGRR ++G + + A P F + S + ++ +L+ + + V
Sbjct 316 GLLSDRFGRRPFVLLGSVALFVLAIPAFILINS-NVIGLIFAGLLMLAVILNCFTGVMAS 374
Query 363 IFTELFGASYRYSGAGVGYQVASIVGGGFTPFIATGLI 400
+F RYS + + S++ G TP +A L+
Sbjct 375 TLPAMFPTHIRYSALAAAFNI-SVLVAGLTPTLAAWLV 411
>P0C0L7 Proline/betaine transporter [Escherichia coli (strain
K12)]
Length=500
Score = 225 bits (573), Expect = 2e-71
Identities = 128/398 (32%), Positives = 213/398 (54%), Gaps = 14/398 (4%)
Query 12 NEKRARKAAFSSFIGAVVDWYDFLLYGIVAALIFNQQFFPSISPAMGTLAAFATFGVGFL 71
++ + RKA ++ +G ++W+DF +YG VA + + FFP P++ +AA ATF V FL
Sbjct 19 DDGKLRKAITAASLGNAMEWFDFGVYGFVAYAL-GKVFFPGADPSVQMVAALATFSVPFL 77
Query 72 FRPLGGVVFGHFGDRLGRKKMLFLTVFLMGTATILIGLLPNFEAIGWWAPVLLVLLRAIQ 131
RPLGG+ FG GD+ GR+K+L +T+ +M +T IGL+P+++ IG WAP+LL++ + Q
Sbjct 78 IRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQ 137
Query 132 GFAVGGEWGGAALMAVENAPAHRKAFYSSGVQIGYGVGLMLATGSVSLIIYIFGQDGFAD 191
GF+VGGE+ GA++ E +P ++ F S + G G +L G V LI I G+ F D
Sbjct 138 GFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLD 197
Query 192 WAWRIPFLASIILVLFALWVRGGQDESHEFEQEVIKKQIAP-------VKIPLFEAVRQN 244
W WRIPF ++ L + L++R +E+ F+Q V K + K+ E +
Sbjct 198 WGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKY 257
Query 245 PKGFFYIIALRLAELLTMYLVTTFALNYSTKNLGMSS--SLFLHIGLMVGAISCLTIPFF 302
+ I L +A +T Y++ T+ +Y + NL S + + I +M+G + P
Sbjct 258 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGML--FVQPVM 315
Query 303 AHISDRFGRRRMCVIGGLIGAICAFPFFFALESGSTFWIVLFAILLANLSHDMVVSVHQP 362
+SDRFGRR ++G + + A P F + S + ++ +L+ + + V
Sbjct 316 GLLSDRFGRRPFVLLGSVALFVLAIPAFILINS-NVIGLIFAGLLMLAVILNCFTGVMAS 374
Query 363 IFTELFGASYRYSGAGVGYQVASIVGGGFTPFIATGLI 400
+F RYS + + S++ G TP +A L+
Sbjct 375 TLPAMFPTHIRYSALAAAFNI-SVLVAGLTPTLAAWLV 411
>P77228 Putative transporter YdfJ [Escherichia coli (strain K12)]
Length=427
Score = 219 bits (558), Expect = 5e-70
Identities = 124/384 (32%), Positives = 200/384 (52%), Gaps = 5/384 (1%)
Query 33 DFLLYGIVAALIFNQQFFPSISPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKKM 92
DF LY + AAL+F++ FFP S AM + A T+G G++ R +G +FG GDR+GRKK+
Sbjct 2 DFQLYSLGAALVFHEIFFPESSTAMALILAMGTYGAGYVARIVGAFIFGKMGDRIGRKKV 61
Query 93 LFLTVFLMGTATILIGLLPNFEAIGWWAPVLLVLLRAIQGFAVGGEWGGAALMAVENAPA 152
LF+T+ +MG T LIG+LP + IG +AP+LLV LR IQG G E GA M E AP
Sbjct 62 LFITITMMGICTTLIGVLPTYAQIGVFAPILLVTLRIIQGLGAGAEISGAGTMLAEYAPK 121
Query 153 HRKAFYSSGVQIGYGVGLMLATGSVSLIIYIFGQDGFADWAWRIPFLASIILVLFALWVR 212
++ SS V +G G + AT + + +I ++ W WRIPFLAS+++++FA+W+R
Sbjct 122 GKRGIISSFVAMGTNCGTLSATAIWAFMFFILSKEELLAWGWRIPFLASVVVMVFAIWLR 181
Query 213 GGQDESHEFEQEVIKKQIAPVKIPLFEAVRQNPKGFFYIIALRLAELLTMYLVTTFALNY 272
ES FE+ + P P K F+ LR + L+ TF Y
Sbjct 182 MNLKESPVFEK--VNDSNQPTAKPAPAGSMFQSKSFWLATGLRFGQAGNSGLIQTFLAGY 239
Query 273 STKNLGMSSSLFLHIGLMVGAISCLTIPFFAHISDRFGRRRMCVIGGLIGAICAFPFFFA 332
+ L + ++ ++ + +TIPF +SD+ GRR +I + A+P
Sbjct 240 LVQTLLFNKAIPTDALMISSILGFMTIPFLGWLSDKIGRRIPYIIMNTSAIVLAWPMLSI 299
Query 333 L--ESGSTFWIVLFAILLANLSHDMVVSVHQPIFTELFGASYRYSGAGVGYQVASIVGGG 390
+ +S + I++ I++ N + + ++ E+FG R++ + ++ ++ G
Sbjct 300 IVDKSYAPSTIMVALIVIHNCAVLGLFALENITMAEMFGCKNRFTRMAISKEIGGLIASG 359
Query 391 FTPFIATGLITLGHGHWQYVAIYL 414
F P +A G+ W +AI +
Sbjct 360 FGPILA-GIFCTMTESWYPIAIMI 382
>P16482 Citrate-proton symporter [Klebsiella pneumoniae]
Length=444
Score = 211 bits (536), Expect = 1e-66
Identities = 131/419 (31%), Positives = 212/419 (51%), Gaps = 22/419 (5%)
Query 26 GAVVDWYDFLLYGIVAALIFNQQFFPSISPAMGTLAAFATFGVGFLFRPLGGVVFGHFGD 85
G ++ +DF L+G A I + FFP+ S + FA FG GFL RP+G +V G + D
Sbjct 36 GNFLEQFDFFLFGFYATYIAHT-FFPASSEFASLMMTFAVFGAGFLMRPIGAIVLGAYID 94
Query 86 RLGRKKMLFLTVFLMGTATILIGLLPNFEAIGWWAPVLLVLLRAIQGFAVGGEWGGAALM 145
++GR+K L +T+ +M T T LI L+P+++ IG WAP+L+++ R +QGF+ G E GG ++
Sbjct 95 KVGRRKGLIVTLSIMATGTFLIVLIPSYQTIGLWAPLLVLIGRLLQGFSAGAELGGVSVY 154
Query 146 AVENAPAHRKAFYSSGVQIGYGVGLMLATGSVSLIIYIFGQDGFADWAWRIPFLASIILV 205
E A RK FY+S V +M+A + + +DW WRIPFL +++V
Sbjct 155 LAEIATPGRKGFYTSWQSGSQQVAIMVAAAMGFALNAVLEPSAISDWGWRIPFLFGVLIV 214
Query 206 LFALWVRGGQDESHEF---EQEVIKKQIAPVKIPLFEAVRQNPKGFFYIIALRLAELLT- 261
F +R +E+ EF + +Q+ + ++ V I + + + T
Sbjct 215 PFIFILRRKLEETQEFTARRHHLAMRQVFATLLANWQVV---------IAGMMMVAMTTT 265
Query 262 -MYLVTTFALNYSTKNLGMSSSLFLHIGLMVGAISCLTIPFFAHISDRFGRRRMCVIGGL 320
YL+T +A + K L +S+S L + L+V + +P +SDRFGRR + + L
Sbjct 266 AFYLITVYAPTFGKKVLMLSASDSLLVTLLVAISNFFWLPVGGALSDRFGRRSVLIAMTL 325
Query 321 IGAICAFPFFFALESGSTFWIVLFAILLANLSHDMVVSVHQPIFTELFGASYRYSGAGVG 380
+ A+P L + +F ++L +L + + M P TE+ A R +G +
Sbjct 326 LALATAWPALTMLANAPSFLMMLSVLLWLSFIYGMYNGAMIPALTEIMPAEVRVAGFSLA 385
Query 381 YQVASIVGGGFTPFIATGLI-----TLGHGHWQYVAIYLTIGCLLTTWVAARMKAQVQS 434
Y +A+ V GGFTP I+T LI G+W A G L T ++ R +Q+
Sbjct 386 YSLATAVFGGFTPVISTALIEYTGDKASPGYWMSFA--AICGLLATCYLYRRSAVALQT 442
>P0AEX3 Alpha-ketoglutarate permease [Escherichia coli (strain
K12)]
Length=432
Score = 202 bits (514), Expect = 2e-63
Identities = 127/418 (30%), Positives = 201/418 (48%), Gaps = 9/418 (2%)
Query 6 SSSVPSNEKRARKAAFSSFIGAVVDWYDFLLYGIVAALIFNQQFFPSISPAMGTLAAFAT 65
S S+ +R A + G +V+W+DF +Y +L F FFPS + L
Sbjct 10 SKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSF-CSLYFAHIFFPSGNTTTQLLQTAGV 68
Query 66 FGVGFLFRPLGGVVFGHFGDRLGRKKMLFLTVFLMGTATILIGLLPNFEAIGWWAPVLLV 125
F GFL RP+GG +FG D+ GRKK + L+V +M +++I LP +E IG WAP LL+
Sbjct 69 FAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCMMCFGSLVIACLPGYETIGTWAPALLL 128
Query 126 LLRAIQGFAVGGEWGGAALMAVENAPAHRKAFYSSGVQIGYGVGLMLATGSVSLIIYIFG 185
L R QG +VGGE+G +A E A RK FY+S + G +LA V ++ +
Sbjct 129 LARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQHTME 188
Query 186 QDGFADWAWRIPFLASIILVLFALWVRGGQDESHEFEQEVIKKQIAPVKIPLFEAVRQNP 245
+W WRIPF +L + ALW+R DE+ + E +K+ + + + +N
Sbjct 189 DAALREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRALKEAGS------LKGLWRNR 242
Query 246 KGFFYIIALRLAELLTMYLVTTFALNYSTKNLGMSSSLFLHIGLMVGAISCLTIPFFAHI 305
+ F ++ A L Y TT+ Y GM +++ I + L P +
Sbjct 243 RAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGAL 302
Query 306 SDRFGRRRMCVIGGLIGAICAFPFFFALESGSTFWIVLFAILLANLSHDMVVSVHQPIFT 365
SD+ GRR + G + AI P AL++ S+ + ++ A L S+ +
Sbjct 303 SDKIGRRTSMLCFGSLAAIFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKA 362
Query 366 ELFGASYRYSGAGVGYQVASIVGGGFTPFIATGLITLG--HGHWQYVAIYLTIGCLLT 421
E+F A R G G+ Y VA+ + GG ++A L ++G + YV + + L++
Sbjct 363 EMFPAQVRALGVGLSYAVANAIFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVS 420
>Q79VC4 Ectoine/proline transporter ProP [Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318
/ LMG 3730 / NCIMB 10025)]
Length=504
Score = 193 bits (491), Expect = 2e-59
Identities = 120/399 (30%), Positives = 199/399 (50%), Gaps = 14/399 (4%)
Query 14 KRARKAAFSSFIGAVVDWYDFLLYGIVAALIFNQQFFPSISPAMGTLAAFATFGVGFLFR 73
K+ R A + +G ++WYDF +YG + + F + LA F V +L R
Sbjct 27 KKIRPAIKGTVVGNFMEWYDFGIYGYLTVTM-TAVFTQGLPQEWQLLAVMFGFAVSYLVR 85
Query 74 PLGGVVFGHFGDRLGRKKMLFLTVFLMGTATILIGLLPNFEAIGWWAPVLLVLLRAIQGF 133
PLGG+V G GD++GR+K+L++T+ +M +T LIGLLP +IG WA VLL LL+ +QGF
Sbjct 86 PLGGLVLGPLGDKVGRQKVLYVTMAMMAVSTALIGLLPTAASIGAWALVLLYLLKMVQGF 145
Query 134 AVGGEWGGAALMAVENAPAHRKAFYSS----GVQIGYGVGLMLATGSVSLIIYIFGQDGF 189
+ GGE+ GA E AP R+ F+ + G +G+ G + + + + +G
Sbjct 146 STGGEYAGATTYVAEFAPDRRRGFFGAFLDMGSYLGFAAGASVVAITTWVTTHFYGATAM 205
Query 190 ADWAWRIPFLASIILVLFALWVRGGQDESHEFEQE------VIKKQIAP--VKIPLFEAV 241
D+ WRIPFL +I L + A+++R E+ FE V++K ++ L +
Sbjct 206 EDFGWRIPFLTAIPLGIIAVYLRTRIPETPAFENNQDEPNAVVEKDTEDPYARLGLAGVI 265
Query 242 RQNPKGFFYIIALRLAELLTMYLVTTFALNYSTKNLGMSSSLFLHIGLMVGAISCLTIPF 301
R + + IA+ A Y +T++ Y + +G+ S+ + + + + L +PF
Sbjct 266 RHHWRPLLIGIAIVAATNTAGYALTSYMPVYLEEQIGLHSASAAAVTVPILVVMSLLLPF 325
Query 302 FAHISDRFGRRRMCVIGGLIGAICAFPFFFALESGSTFWIVLFAILLANLSHDMVVSVHQ 361
SDR GR+ + I P F + +G T VL A+ + + + V++
Sbjct 326 VGMWSDRVGRKPVYATAVAATLILMVPAFLIMNTG-TIGAVLIALSMVAIPTGLYVALSA 384
Query 362 PIFTELFGASYRYSGAGVGYQVASIVGGGFTPFIATGLI 400
LF + R+SG G+ Y ++ + GG TP I L+
Sbjct 385 SALPALFPTASRFSGMGISYNISVSLFGGTTPLITQFLL 423
Lambda K H a alpha
0.330 0.144 0.453 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2265720
Database: 73578dd59ab0493f206a83aec5d42af5.SwissProt.fasta
Posted date: May 30, 2024 8:51 AM
Number of letters in database: 6,450
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
