BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 2b08b83418fa8f9dc1eec0b76e8bc691.SwissProt.fasta
8 sequences; 2,222 total letters
Query= ACIAD0226
Length=265
Score E
Sequences producing significant alignments: (Bits) Value
Q8FFY2 Uncharacterized protein YegX [Escherichia coli O6:H1 (stra... 132 5e-41
P76421 Uncharacterized protein YegX [Escherichia coli (strain K12)] 130 3e-40
Q8X7H0 Uncharacterized protein YegX [Escherichia coli O157:H7] 124 6e-38
P25310 Lysozyme M1 [Streptomyces globisporus] 89.4 1e-24
P26836 Probable autolytic lysozyme [Clostridium perfringens (stra... 84.0 2e-22
P34020 Autolytic lysozyme [Clostridium acetobutylicum (strain ATC... 74.3 4e-19
D4ANU4 N,O-diacetylmuramidase [Arthroderma benhamiae (strain ATCC... 59.3 3e-14
P00721 N,O-diacetylmuramidase [Chalaropsis sp] 51.2 2e-11
>Q8FFY2 Uncharacterized protein YegX [Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC)]
Length=272
Score = 132 bits (332), Expect = 5e-41
Identities = 82/269 (30%), Positives = 122/269 (45%), Gaps = 35/269 (13%)
Query 17 QLRLLYSPKF--LGIGFSLVMVILIY----VGFFYNQMASAQDY---------------- 54
QLR+ KF L L+ ++ IY V FFY+ +DY
Sbjct 2 QLRITSRKKFTVLLCALGLISIVAIYPRQTVNFFYSTAIQIKDYIHFYGYRPVKSFAIRI 61
Query 55 ----TVRGFDVSHHQGNIDWAKISPQK-----FQFVYLKATEGGDFQDPKFQENWLKARE 105
T+ G DVS Q IDW +++ + QF ++KATEG DP F NW +RE
Sbjct 62 PASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKATEGEKLVDPYFSRNWQLSRE 121
Query 106 YHFHVGAYHFYRLCRDGKTQAENFIATVPKKIDALPPVIDLEYDANCINTYTKEQLLEQI 165
GAYH++ QA F+ TV P V+D+E ++++ + +
Sbjct 122 NGLLRGAYHYFSPSVSASVQARLFLQTVDFSQGDFPAVLDVEERGKLSAKELRKRVSQWL 181
Query 166 KVTHDLLKAHYGKQPIFYVSKNFYHIVLMGSFQNAPLWIRDYDGKPELKDDRQWLFWQYT 225
K +++ GK+PI Y FYH L G F P W+ Y + D W FWQ++
Sbjct 182 K----MVEKRTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAHYYQRRPDNDGMAWRFWQHS 237
Query 226 SKSSIKGIEKPVDLNVYAGSLQHWQQFVN 254
+ + GI PVD NV+ G+++ Q FV+
Sbjct 238 DRGQVDGINGPVDFNVFNGTVEELQGFVD 266
>P76421 Uncharacterized protein YegX [Escherichia coli (strain
K12)]
Length=272
Score = 130 bits (327), Expect = 3e-40
Identities = 80/269 (30%), Positives = 120/269 (45%), Gaps = 35/269 (13%)
Query 17 QLRLLYSPKFLGI--GFSLVMVILIY----VGFFYNQMASAQDY---------------- 54
QLR+ K + L+ ++ IY V FFY+ DY
Sbjct 2 QLRITSRKKLTSLLCALGLISIVAIYPRQTVNFFYSTAVQITDYIHFYGYRPVKSFAIRI 61
Query 55 ----TVRGFDVSHHQGNIDWAKISPQK-----FQFVYLKATEGGDFQDPKFQENWLKARE 105
T+ G DVS Q IDW +++ + QF ++KATEG DP F NW +RE
Sbjct 62 PASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKATEGEKLVDPYFSRNWQLSRE 121
Query 106 YHFHVGAYHFYRLCRDGKTQAENFIATVPKKIDALPPVIDLEYDANCINTYTKEQLLEQI 165
GAYH++ QA F+ TV P V+D+E ++++ + +
Sbjct 122 NGLLRGAYHYFSPSVSASVQARLFLQTVDFSQGDFPAVLDVEERGKLSAKELRKRVSQWL 181
Query 166 KVTHDLLKAHYGKQPIFYVSKNFYHIVLMGSFQNAPLWIRDYDGKPELKDDRQWLFWQYT 225
K +++ GK+PI Y FYH L G F P W+ Y + D W FWQ++
Sbjct 182 K----MVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAHYYQRRPDNDGMAWRFWQHS 237
Query 226 SKSSIKGIEKPVDLNVYAGSLQHWQQFVN 254
+ + GI PVD NV+ G+++ Q FV+
Sbjct 238 DRGQVDGINGPVDFNVFNGTVEELQAFVD 266
>Q8X7H0 Uncharacterized protein YegX [Escherichia coli O157:H7]
Length=272
Score = 124 bits (311), Expect = 6e-38
Identities = 78/269 (29%), Positives = 118/269 (44%), Gaps = 35/269 (13%)
Query 17 QLRLLYSPKFLGI--GFSLVMVILIY----VGFFYNQMASAQDY---------------- 54
QLR+ K + L+ ++ IY V FFY+ DY
Sbjct 2 QLRITSRKKLTALLCALGLISIVAIYPRQTVNFFYSTAVQITDYIHFYGYRPVKSFAIHI 61
Query 55 ----TVRGFDVSHHQGNIDWAKISPQK-----FQFVYLKATEGGDFQDPKFQENWLKARE 105
T+ G DVS Q IDW +++ + QF ++KATEG DP F NW +RE
Sbjct 62 PASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKATEGEKLVDPYFSRNWQLSRE 121
Query 106 YHFHVGAYHFYRLCRDGKTQAENFIATVPKKIDALPPVIDLEYDANCINTYTKEQLLEQI 165
GAYH++ QA F+ TV P V+D+E ++++ + +
Sbjct 122 NGLLRGAYHYFSPSVAAPVQARLFLQTVDFSQGDFPAVLDVEERGKLSAKELRKRVSQWL 181
Query 166 KVTHDLLKAHYGKQPIFYVSKNFYHIVLMGSFQNAPLWIRDYDGKPELKDDRQWLFWQYT 225
K +++ GK+P+ Y FYH L G F P W+ Y + D W FWQ++
Sbjct 182 K----MVEKSTGKKPVIYSGAVFYHTNLAGYFNEYPWWVAHYYQRRPDNDGMAWRFWQHS 237
Query 226 SKSSIKGIEKPVDLNVYAGSLQHWQQFVN 254
+ + GI VD NV+ G+ + Q FV+
Sbjct 238 DRGQVDGINGSVDFNVFNGTEEELQAFVD 266
>P25310 Lysozyme M1 [Streptomyces globisporus]
Length=294
Score = 89.4 bits (220), Expect = 1e-24
Identities = 58/201 (29%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query 56 VRGFDVSHHQGNIDWAKISPQKFQFVYLKATEGGDFQDPKFQENWLKAREYHFHVGAYHF 115
V+G DVSH QG+I+W+ + F Y+KATEG +++D +F N+ A GAYHF
Sbjct 82 VQGIDVSHWQGSINWSSVKSAGMSFAYIKATEGTNYKDDRFSANYTNAYNAGIIRGAYHF 141
Query 116 YR-LCRDGKTQAENFIAT---VPKKIDALPPVIDLEYDANCINTY--TKEQLLEQIKVTH 169
R G QA+ F + + LP V+D+E++ + Y + Q+ I H
Sbjct 142 ARPNASSGTAQADYFASNGGGWSRDNRTLPGVLDIEHNPSGAMCYGLSTTQMRTWINDFH 201
Query 170 DLLKAHYGKQPIFYVSKNFYHIVL---MGSFQNAPLWIRDYD-GKPELKDD-RQWLFWQY 224
KA + + Y + ++++ G +P W+ + P + W FWQY
Sbjct 202 ARYKARTTRDVVIYTTASWWNTCTGSWNGMAAKSPFWVAHWGVSAPTVPSGFPTWTFWQY 261
Query 225 TSKSSIKGIEKPVDLNVYAGS 245
++ + G+ VD N + GS
Sbjct 262 SATGRVGGVSGDVDRNKFNGS 282
>P26836 Probable autolytic lysozyme [Clostridium perfringens (strain
13 / Type A)]
Length=342
Score = 84.0 bits (206), Expect = 2e-22
Identities = 55/198 (28%), Positives = 95/198 (48%), Gaps = 5/198 (3%)
Query 48 MASAQDYTVRGFDVSHHQGNIDWAKISPQKFQFVYLKATEGGDFQDPKFQENWLKAREYH 107
M ++G DVS+ QGNI++ + + + VY+KATEG F+D ++N+ +A+
Sbjct 1 MEGRNSNNLKGIDVSNWQGNINFKSVKNEGIEVVYIKATEGDYFKDSYAKQNYKRAKAEG 60
Query 108 FHVGAYHFYRLCRDGKTQAENFIATVPKKIDALPPVIDLEYDANCINTYTKEQLLEQIKV 167
VG YHF++ ++ K QA+ FI + +I A L D + +L
Sbjct 61 LKVGFYHFFKPNKNAKRQAKYFIDYL-NEIGATDYDCKLALDVETTEGRSAYELTTMCIE 119
Query 168 THDLLKAHYGKQPIFYVSKNFYHIVLMGSFQNAPLWIRDYDGKPELKDDRQWLFW---QY 224
+ ++ ++ + Y +F + L PLWI +Y G KD+R W W QY
Sbjct 120 FLEEVRKITNREVVVYTYTSFANNNLDNRLGVYPLWIAEY-GVKAPKDNRVWSSWIGFQY 178
Query 225 TSKSSIKGIEKPVDLNVY 242
+ K ++ G+ D+N +
Sbjct 179 SDKGNVAGVSGNCDMNEF 196
>P34020 Autolytic lysozyme [Clostridium acetobutylicum (strain
ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)]
Length=324
Score = 74.3 bits (181), Expect = 4e-19
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 9/189 (5%)
Query 56 VRGFDVSHHQGNIDWAKISPQKFQFVYLKATEGGDFQDPKFQENWLKAREYHFHVGAYHF 115
++G D+ QG++D+ + + VY+KATEG + D +++ + A+ +G YH+
Sbjct 1 MKGIDIYSGQGSVDFNAVKESGVEVVYIKATEGLTYTDSTYKDFYDGAKNAGLKIGFYHY 60
Query 116 YRLCRDGKTQAENFIATVPKKIDALPPVIDLEYDANCINTYTKEQLLEQIKVTHDLLKAH 175
R D ++AE+F T+ ID+E + +Q+ ++ D L +
Sbjct 61 LR-ANDPTSEAEHFFNTISGLSLDCKCAIDVEVTLG----QSIDQISSNVRKFADYL-IN 114
Query 176 YGKQPIFYVSKNFYHIVLMGSFQNAPLWIRDYD-GKPELKDDRQWLFWQYTSKSSIKGIE 234
G Y NFY L + ++ PLWI +Y KP + D ++ +QY+ S+ GI
Sbjct 115 KGLDVCVYTYTNFYKDNLNSTVKDLPLWIAEYGVSKPNI--DASYVGFQYSDSGSVNGIS 172
Query 235 KPVDLNVYA 243
DL+ ++
Sbjct 173 GSADLDEFS 181
>D4ANU4 N,O-diacetylmuramidase [Arthroderma benhamiae (strain
ATCC MYA-4681 / CBS 112371)]
Length=235
Score = 59.3 bits (142), Expect = 3e-14
Identities = 41/140 (29%), Positives = 64/140 (46%), Gaps = 5/140 (4%)
Query 55 TVRGFDVSHHQGNIDWAKISPQKFQFVYLKATEGGDFQDPKFQENWLKAREYHFHVGAYH 114
+V+GFD+S +Q N+D+ +FV +KATEG F+ F + A F G YH
Sbjct 29 SVQGFDISGYQPNVDFRAAYNGGARFVMIKATEGTTFKSSTFNSQYTGATNNKFIRGGYH 88
Query 115 FYRLCRDGKTQAENFIATVPKKID---ALPPVIDLEYDANCINTY--TKEQLLEQIKVTH 169
F Q + F+A + LP +IDLE + Y + ++ IK
Sbjct 89 FAHPDTSATAQCDYFLANGGGWSNDGITLPGMIDLEGTSGKPKCYGLSASAMIAWIKAFS 148
Query 170 DLLKAHYGKQPIFYVSKNFY 189
D A G+ P+ Y S +++
Sbjct 149 DRYNAKTGRYPMIYTSPDWW 168
>P00721 N,O-diacetylmuramidase [Chalaropsis sp]
Length=211
Score = 51.2 bits (121), Expect = 2e-11
Identities = 41/144 (28%), Positives = 69/144 (48%), Gaps = 9/144 (6%)
Query 55 TVRGFDVSHHQGNIDWAKISPQKFQFVYLKATEGGDFQDPKFQENW---LKAREYHFHVG 111
TV+GFD+S +Q ++++A +FV +KATEG + +P F + A +F G
Sbjct 1 TVQGFDISSYQPSVNFAGAYSAGARFVIIKATEGTSYTNPSFSSQYNGATTATGNYFIRG 60
Query 112 AYHFYRLCR-DGKTQAENFIATVPKKID---ALPPVIDLEYDANCINTY--TKEQLLEQI 165
YHF G QA+ FIA LP ++DLE + + + + ++ I
Sbjct 61 GYHFAHPGETTGAAQADYFIAHGGGWSGDGITLPGMLDLESEGSNPACWGLSAASMVAWI 120
Query 166 KVTHDLLKAHYGKQPIFYVSKNFY 189
K D A G+ P+ Y + +++
Sbjct 121 KAFSDRYHAVTGRYPMLYTNPSWW 144
Lambda K H a alpha
0.326 0.141 0.448 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 431660
Database: 2b08b83418fa8f9dc1eec0b76e8bc691.SwissProt.fasta
Posted date: May 9, 2024 5:02 PM
Number of letters in database: 2,222
Number of sequences in database: 8
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
