BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 0cfc6de50696b23cab9f90b814ad4ed8.SwissProt.fasta
22 sequences; 8,525 total letters
Query= ACIAD0230
Length=532
Score E
Sequences producing significant alignments: (Bits) Value
P0AEC0 UPF0053 inner membrane protein YoaE [Escherichia coli (str... 478 2e-168
P0AEC1 UPF0053 inner membrane protein YoaE [Escherichia coli O6:H... 478 2e-168
P0AEC2 UPF0053 inner membrane protein YoaE [Escherichia coli O157... 478 2e-168
P76389 UPF0053 protein YegH [Escherichia coli (strain K12)] 454 6e-159
Q83KI8 UPF0053 protein YegH [Shigella flexneri] 454 9e-159
P57408 UPF0053 protein BU323 [Buchnera aphidicola subsp. Acyrthos... 441 7e-154
Q8K9M0 UPF0053 protein BUsg_314 [Buchnera aphidicola subsp. Schiz... 439 6e-153
Q89AI6 UPF0053 protein bbp_300 [Buchnera aphidicola subsp. Baizon... 422 2e-146
P43932 UPF0053 protein HI_0056 [Haemophilus influenzae (strain AT... 266 1e-89
P67127 UPF0053 inner membrane protein YgdQ [Escherichia coli (str... 249 6e-83
P67128 UPF0053 inner membrane protein YgdQ [Escherichia coli O6:H... 249 6e-83
P67129 UPF0053 inner membrane protein YgdQ [Escherichia coli O157... 249 6e-83
Q48446 Uncharacterized 18.9 kDa protein in cps region [Klebsiella... 213 4e-70
Q48445 UPF0053 protein in cps region [Klebsiella pneumoniae] 181 9e-56
P0AE45 Polyamine export protein [Escherichia coli (strain K12)] 112 6e-30
A0A0F6BAS6 Polyamine export protein [Salmonella typhimurium (stra... 111 2e-29
P0A2L3 Magnesium and cobalt efflux protein CorC [Salmonella typhi... 102 2e-27
Q54318 Hemolysin C [Brachyspira hyodysenteriae] 95.1 5e-25
P54428 UPF0053 protein YrkA [Bacillus subtilis (strain 168)] 91.3 8e-23
P37908 UPF0053 inner membrane protein YfjD [Escherichia coli (str... 82.0 8e-20
O05961 Hemolysin C [Rickettsia prowazekii (strain Madrid E)] 79.0 3e-19
Q68W10 Hemolysin C [Rickettsia typhi (strain ATCC VR-144 / Wilmin... 77.4 1e-18
>P0AEC0 UPF0053 inner membrane protein YoaE [Escherichia coli
(strain K12)]
Length=518
Score = 478 bits (1231), Expect = 2e-168
Identities = 260/530 (49%), Positives = 355/530 (67%), Gaps = 15/530 (3%)
Query 4 EWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMRLIL 63
E++ DPS W GL TLVVLEIVLGIDNLVFIAILA+KLPP+QR+ AR++GL LAL MRL L
Sbjct 2 EFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLGL 61
Query 64 LASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEENPV 123
L+ I+W+VTLT+PLF + D FSGRDLI+LFGG+FLLFK T ELHERLE +
Sbjct 62 LSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDHDSGHGKG 121
Query 124 HATFWMVIVQIVVLDAVFSLDSVITAVGMVKHLPVMMIAVIIAVGIMLWASKPLMDFVNK 183
+A+FW+V+ QIV+LDAVFSLD+VITAVGMV HLPVMM AV+IA+ +ML ASKPL FVN+
Sbjct 122 YASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFVNQ 181
Query 184 HPTVVILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMNQTMRHNQEKSVTT 243
HPTVV+LCLSFL+MIG SLV EGFGFHIPKGYLYAAIGF+++IE+ NQ R N + +T
Sbjct 182 HPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQST 241
Query 244 TDLRYRTASAVMKMLGGKNSSNGSDSQKNENENVLATQAFADEVFDEENSVYHSVMVQGV 303
LR RTA A+++++GGK +N N + AFA+E M+ GV
Sbjct 242 LPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEE---------ERYMINGV 292
Query 304 LGLAERPVKSVMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARGELDNIEGITLTHK 363
L LA R ++ +MTPR EI W+D ++ + ++E+LL+ HS V RGELD I GI +
Sbjct 293 LTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKE 352
Query 364 VLNEYIETGVLNFSHHLREP-VIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIVTP 422
+L +E GV + P +IV E + ++ LR+A IV NE+G ++G+VTP
Sbjct 353 LL-VALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTP 411
Query 423 IDVLEAIAGEFPDEDELEAAAESLEDG-SLILEGSTDIRHVSLLLNRDLVDESEEYSTLS 481
+DVLEAIAGEFPD DE E + DG +++G TD+ + L+ + + + ++ +T++
Sbjct 412 LDVLEAIAGEFPDADE---TPEIITDGDGWLVKGGTDLHALQQALDVEHLADDDDIATVA 468
Query 482 GYILFHLGRLPENGQKMHADGYIFEVVTMDGHKIEKVHIVADPDAGKEKD 531
G ++ G +P G + ++ + ++++ V IV + A E +
Sbjct 469 GLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKEQPAHDEDE 518
>P0AEC1 UPF0053 inner membrane protein YoaE [Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=518
Score = 478 bits (1231), Expect = 2e-168
Identities = 260/530 (49%), Positives = 355/530 (67%), Gaps = 15/530 (3%)
Query 4 EWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMRLIL 63
E++ DPS W GL TLVVLEIVLGIDNLVFIAILA+KLPP+QR+ AR++GL LAL MRL L
Sbjct 2 EFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLGL 61
Query 64 LASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEENPV 123
L+ I+W+VTLT+PLF + D FSGRDLI+LFGG+FLLFK T ELHERLE +
Sbjct 62 LSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDHDSGHGKG 121
Query 124 HATFWMVIVQIVVLDAVFSLDSVITAVGMVKHLPVMMIAVIIAVGIMLWASKPLMDFVNK 183
+A+FW+V+ QIV+LDAVFSLD+VITAVGMV HLPVMM AV+IA+ +ML ASKPL FVN+
Sbjct 122 YASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFVNQ 181
Query 184 HPTVVILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMNQTMRHNQEKSVTT 243
HPTVV+LCLSFL+MIG SLV EGFGFHIPKGYLYAAIGF+++IE+ NQ R N + +T
Sbjct 182 HPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQST 241
Query 244 TDLRYRTASAVMKMLGGKNSSNGSDSQKNENENVLATQAFADEVFDEENSVYHSVMVQGV 303
LR RTA A+++++GGK +N N + AFA+E M+ GV
Sbjct 242 LPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEE---------ERYMINGV 292
Query 304 LGLAERPVKSVMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARGELDNIEGITLTHK 363
L LA R ++ +MTPR EI W+D ++ + ++E+LL+ HS V RGELD I GI +
Sbjct 293 LTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKE 352
Query 364 VLNEYIETGVLNFSHHLREP-VIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIVTP 422
+L +E GV + P +IV E + ++ LR+A IV NE+G ++G+VTP
Sbjct 353 LL-VALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTP 411
Query 423 IDVLEAIAGEFPDEDELEAAAESLEDG-SLILEGSTDIRHVSLLLNRDLVDESEEYSTLS 481
+DVLEAIAGEFPD DE E + DG +++G TD+ + L+ + + + ++ +T++
Sbjct 412 LDVLEAIAGEFPDADE---TPEIITDGDGWLVKGGTDLHALQQALDVEHLADDDDIATVA 468
Query 482 GYILFHLGRLPENGQKMHADGYIFEVVTMDGHKIEKVHIVADPDAGKEKD 531
G ++ G +P G + ++ + ++++ V IV + A E +
Sbjct 469 GLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKEQPAHDEDE 518
>P0AEC2 UPF0053 inner membrane protein YoaE [Escherichia coli
O157:H7]
Length=518
Score = 478 bits (1231), Expect = 2e-168
Identities = 260/530 (49%), Positives = 355/530 (67%), Gaps = 15/530 (3%)
Query 4 EWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMRLIL 63
E++ DPS W GL TLVVLEIVLGIDNLVFIAILA+KLPP+QR+ AR++GL LAL MRL L
Sbjct 2 EFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLGL 61
Query 64 LASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEENPV 123
L+ I+W+VTLT+PLF + D FSGRDLI+LFGG+FLLFK T ELHERLE +
Sbjct 62 LSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDHDSGHGKG 121
Query 124 HATFWMVIVQIVVLDAVFSLDSVITAVGMVKHLPVMMIAVIIAVGIMLWASKPLMDFVNK 183
+A+FW+V+ QIV+LDAVFSLD+VITAVGMV HLPVMM AV+IA+ +ML ASKPL FVN+
Sbjct 122 YASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFVNQ 181
Query 184 HPTVVILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMNQTMRHNQEKSVTT 243
HPTVV+LCLSFL+MIG SLV EGFGFHIPKGYLYAAIGF+++IE+ NQ R N + +T
Sbjct 182 HPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQST 241
Query 244 TDLRYRTASAVMKMLGGKNSSNGSDSQKNENENVLATQAFADEVFDEENSVYHSVMVQGV 303
LR RTA A+++++GGK +N N + AFA+E M+ GV
Sbjct 242 LPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEE---------ERYMINGV 292
Query 304 LGLAERPVKSVMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARGELDNIEGITLTHK 363
L LA R ++ +MTPR EI W+D ++ + ++E+LL+ HS V RGELD I GI +
Sbjct 293 LTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKE 352
Query 364 VLNEYIETGVLNFSHHLREP-VIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIVTP 422
+L +E GV + P +IV E + ++ LR+A IV NE+G ++G+VTP
Sbjct 353 LL-VALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTP 411
Query 423 IDVLEAIAGEFPDEDELEAAAESLEDG-SLILEGSTDIRHVSLLLNRDLVDESEEYSTLS 481
+DVLEAIAGEFPD DE E + DG +++G TD+ + L+ + + + ++ +T++
Sbjct 412 LDVLEAIAGEFPDADE---TPEIITDGDGWLVKGGTDLHALQQALDVEHLADDDDIATVA 468
Query 482 GYILFHLGRLPENGQKMHADGYIFEVVTMDGHKIEKVHIVADPDAGKEKD 531
G ++ G +P G + ++ + ++++ V IV + A E +
Sbjct 469 GLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKEQPAHDEDE 518
>P76389 UPF0053 protein YegH [Escherichia coli (strain K12)]
Length=527
Score = 454 bits (1169), Expect = 6e-159
Identities = 251/523 (48%), Positives = 345/523 (66%), Gaps = 14/523 (3%)
Query 4 EWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMRLIL 63
EW++DPS W GL TL+V+E+VLGIDNLVFIAILAEKLPP+QR+ AR+ GL+LA+ MRL+L
Sbjct 2 EWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRDRARVTGLLLAMLMRLLL 61
Query 64 LASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEENPV 123
LASI+W+VTLT+PLF FS RDLI+LFGG FLLFK TMEL+ERLEGK
Sbjct 62 LASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKATMELNERLEGKDSNNPTQRK 121
Query 124 HATFWMVIVQIVVLDAVFSLDSVITAVGMVKHLPVMMIAVIIAVGIMLWASKPLMDFVNK 183
A FW V+ QIVVLDA+FSLDSVITAVGMV HL VMM AV+IA+ +ML ASKPL FVN
Sbjct 122 GAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAAVVIAISLMLMASKPLTQFVNS 181
Query 184 HPTVVILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMNQTMRHNQEKSVTT 243
HPT+VILCLSFL+MIGFSLV EGFGF IPKGYLYAAIGF+V+IE +NQ N+ + ++
Sbjct 182 HPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAIGFSVMIEALNQLAIFNRRRFLSA 241
Query 244 TD-LRYRTASAVMKMLGGKNSSNGSDSQKNENENVLATQAFADEVFDEENSVYHSVMVQG 302
LR RT AVM++L G+ D+ E ++L ++F+ + M++
Sbjct 242 NQTLRQRTTEAVMRLLSGQKEDAELDA---ETASMLVDHG-NQQIFNPQ----ERRMIER 293
Query 303 VLGLAERPVKSVMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARG-ELDNIEGITLT 361
VL L +R V S+MT R +IE IDL+ E +++ L H+RL+V G + +++ G+
Sbjct 294 VLNLNQRTVSSIMTSRHDIEHIDLNAPEEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHV 353
Query 362 HKVLNEYIETGVLNFSHHLREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIVT 421
+L + + LN +R+P++ E +L +EQ R A A V++E+GS+EGIVT
Sbjct 354 IDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVT 413
Query 422 PIDVLEAIAGEFPDEDELEAAAESLE---DGSLILEGSTDIRHVSLLLNRDLVDESEEYS 478
DV E IAG P+E E A ++ DGS G + + + L DE EY
Sbjct 414 LSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANGHMPLEDLVQYVPLPL-DEKREYH 472
Query 479 TLSGYILFHLGRLPENGQKMHADGYIFEVVTMDGHKIEKVHIV 521
T++G ++ +L R+P+ G+++ Y+ + + ++ H+++KV I+
Sbjct 473 TIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHRVQKVQII 515
>Q83KI8 UPF0053 protein YegH [Shigella flexneri]
Length=527
Score = 454 bits (1168), Expect = 9e-159
Identities = 249/523 (48%), Positives = 344/523 (66%), Gaps = 14/523 (3%)
Query 4 EWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMRLIL 63
EW++DPS W GL TL+V+E+VLGIDNLVFIAILAEKLPP+QR+ AR+ GL+LA+ MRL+L
Sbjct 2 EWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRDRARVTGLLLAMLMRLLL 61
Query 64 LASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEENPV 123
LASI+W+VTLT+PLF FS RDLI+LFGG FLLFK TMEL+ERLEGK
Sbjct 62 LASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKATMELNERLEGKDSNNPTQRK 121
Query 124 HATFWMVIVQIVVLDAVFSLDSVITAVGMVKHLPVMMIAVIIAVGIMLWASKPLMDFVNK 183
A FW V+ QIVVLDA+FSLDSVITAVGMV HL VMM AV+IA+ +ML ASKPL FVN
Sbjct 122 GAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAAVVIAISLMLMASKPLTQFVNS 181
Query 184 HPTVVILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMNQTMRHNQEKSVTT 243
HPT+VILCLSFL+MIGFSLV EGFGF IPKGYLYAAIGF+V+IE +NQ N+ + ++
Sbjct 182 HPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAIGFSVMIEALNQLAIFNRRRFLSA 241
Query 244 TD-LRYRTASAVMKMLGGKNSSNGSDSQKNENENVLATQAFADEVFDEENSVYHSVMVQG 302
LR RT AVM++L G+ D++ + + ++F+ + M++
Sbjct 242 NQTLRQRTTEAVMRLLSGQK----EDAELDAKTASMLVDHGNQQIFNPQ----ERRMIER 293
Query 303 VLGLAERPVKSVMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARG-ELDNIEGITLT 361
VL L +R V S+MT R +IE IDL+ E +++ L H+RL+V G + +++ G+
Sbjct 294 VLNLNQRTVSSIMTSRHDIEHIDLNAPEEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHV 353
Query 362 HKVLNEYIETGVLNFSHHLREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIVT 421
+L + + LN +R+P++ E +L +EQ R A A V++E+GS+EGIVT
Sbjct 354 IDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVT 413
Query 422 PIDVLEAIAGEFPDEDELEAAAESLE---DGSLILEGSTDIRHVSLLLNRDLVDESEEYS 478
DV E IAG P+E E A ++ DGS G + + + L DE EY
Sbjct 414 LSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANGHMPLEDLVQYVPLPL-DEKREYH 472
Query 479 TLSGYILFHLGRLPENGQKMHADGYIFEVVTMDGHKIEKVHIV 521
T++G ++ +L R+P+ G+++ Y+ + + ++ H+++KV I+
Sbjct 473 TIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHRVQKVQII 515
>P57408 UPF0053 protein BU323 [Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS)]
Length=521
Score = 441 bits (1135), Expect = 7e-154
Identities = 244/531 (46%), Positives = 344/531 (65%), Gaps = 22/531 (4%)
Query 4 EWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMRLIL 63
E+ DPS W GL TLV+LE+VLGIDNL+F+AIL+EKLPP QR+ AR++GL LAL MRL L
Sbjct 2 EFFLDPSTWAGLLTLVILEVVLGIDNLIFVAILSEKLPPNQRDKARLIGLGLALVMRLAL 61
Query 64 LASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEENPV 123
L+ I+W+VTL P+ H S RD+ILLFGG FLLFK TMELHERLE + EN
Sbjct 62 LSLISWIVTLNSPIVHNKFFSLSIRDIILLFGGFFLLFKTTMELHERLENNHHENSENKN 121
Query 124 HATFWMVIVQIVVLDAVFSLDSVITAVGMVKHLPVMMIAVIIAVGIMLWASKPLMDFVNK 183
+A FW V++QIVVLDAVFSLD++ITAVGMV L +MMIAVI+A +ML ASK L +F+N
Sbjct 122 YAGFWAVVIQIVVLDAVFSLDAIITAVGMVNQLLIMMIAVILATFLMLLASKALTNFINL 181
Query 184 HPTVVILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMNQTMRHNQEKSVTT 243
H TVV+LCLSFL+MIGFSLV E F IPKGYLYAAIGF++LIE+ NQ RHN K+ +
Sbjct 182 HQTVVVLCLSFLLMIGFSLVTEALRFCIPKGYLYAAIGFSILIEIFNQIARHNFMKNQSR 241
Query 244 TDLRYRTASAVMKMLGGKNSSNGS------DSQKNEN-ENVLATQAFADEVFDEENSVYH 296
+R R A A+++++ G+ + +SQK ++ ++ + F DE
Sbjct 242 RPMRQRAAEAILRLMVGEQNKKQQIKKIEINSQKTDSIQSSKEMETFKDE---------E 292
Query 297 SVMVQGVLGLAERPVKSVMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARGELDNIE 356
M+ GVL LA R ++S+MTPR I W++ + + ++ +LL HS V +GELD I
Sbjct 293 RYMINGVLTLAGRSIRSIMTPRSNISWVNTEKNTDEIRMQLLDTPHSLFPVCKGELDEII 352
Query 357 GITLTHKVLNEYIETGV--LNFSHHLREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYG 414
GI ++L IE + FS + P+I+ + + ++ LR+A IV NE+G
Sbjct 353 GIVRAKELL-VAIEKKIDASTFSSKIL-PIIIPDTLDPIKLLGVLRRAQGSFVIVSNEFG 410
Query 415 SIEGIVTPIDVLEAIAGEFPDEDELEAAAESLEDGSLILEGSTDIRHVSLLLNRDLVDES 474
++G++TP+DVLEAIAGEFPD DE + E+ S +++G TD+ + LLN + + +
Sbjct 411 VVQGLITPLDVLEAIAGEFPDADETPDIIQ--ENNSWLVKGETDLHSLQQLLNTEELIKE 468
Query 475 EEYSTLSGYILFHLGRLPENGQKMHADGYIFEVVTMDGHKIEKVHIVADPD 525
+ Y++L G ++ G+LP G+ +H + F +V ++I+ V I+ + D
Sbjct 469 DNYASLGGLLIAQKGQLPIPGEIIHIHPFYFHIVKATEYRIDLVRIIKNQD 519
>Q8K9M0 UPF0053 protein BUsg_314 [Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg)]
Length=515
Score = 439 bits (1128), Expect = 6e-153
Identities = 242/519 (47%), Positives = 340/519 (66%), Gaps = 10/519 (2%)
Query 4 EWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMRLIL 63
E+ DPS W GL TLVVLE+VLGIDNL+F+AIL+EKLPP QR+ AR++GL LAL MRL L
Sbjct 2 EFFLDPSIWAGLLTLVVLEVVLGIDNLIFVAILSEKLPPNQRDKARLIGLGLALIMRLAL 61
Query 64 LASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEENPV 123
L+ I+WVVTLT P+ S RDLILL GG+FLLFK T+ELHERLE + + EN
Sbjct 62 LSLISWVVTLTSPIISNNFFSLSIRDLILLIGGLFLLFKATIELHERLENEDHENTENKN 121
Query 124 HATFWMVIVQIVVLDAVFSLDSVITAVGMVKHLPVMMIAVIIAVGIMLWASKPLMDFVNK 183
+A+FW V++QIVVLDAVFSLD++ITAVGMV L +MMIAV++A +ML ASK L +F+N
Sbjct 122 YASFWAVVIQIVVLDAVFSLDAIITAVGMVNQLLIMMIAVVLATILMLLASKALTNFINI 181
Query 184 HPTVVILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMNQTMRHNQEKSVTT 243
H TVV+LCLSFL+MIGFSLV E F+IPKGYLYAAIGF++LIE+ NQ RHN K+ +
Sbjct 182 HQTVVVLCLSFLLMIGFSLVAEALKFYIPKGYLYAAIGFSILIEIFNQIARHNFMKNQSR 241
Query 244 TDLRYRTASAVMK-MLGGKNSSNGSDSQKNENENVLATQAFADEVFDEENSVYHSVMVQG 302
+R R A A+++ M+ KN++ N+ E VL++ + DEE M+ G
Sbjct 242 KPMRQRAAEAILRLMIREKNNNKNRIKTDNKAEIVLSSSLETETFKDEE-----KYMING 296
Query 303 VLGLAERPVKSVMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARGELDNIEGITLTH 362
VL LA R +KS+MTPR I W++ + ++ +LL H+ V +GELD I GI
Sbjct 297 VLTLAGRSIKSIMTPRSNISWVNTEKTINEIRLQLLDTPHNLFPVCKGELDEIIGIVRAK 356
Query 363 KVLNEYIET-GVLNFSHHLREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIVT 421
++L + V F+ + P+I+ + + ++ LR+A IV NE+G ++G++T
Sbjct 357 ELLVAIEKNIDVYTFASQI-PPIIIPDTLDPINLLGVLRRAQGSFVIVSNEFGVVQGLIT 415
Query 422 PIDVLEAIAGEFPDEDELEAAAESLEDGSLILEGSTDIRHVSLLLNRDLVDESEEYSTLS 481
P+DVLEAIAGEFPD DE + E S +++G TD+ + LLN + + ++ ++L
Sbjct 416 PLDVLEAIAGEFPDADETPDIIK--EQNSWLVKGETDLHSLQQLLNTKELIKQDDCASLG 473
Query 482 GYILFHLGRLPENGQKMHADGYIFEVVTMDGHKIEKVHI 520
G ++ G+LP G+ + + + F +V ++I+ V I
Sbjct 474 GLLISQKGQLPLPGETIKINSFSFHIVNATEYRIDLVRI 512
>Q89AI6 UPF0053 protein bbp_300 [Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp)]
Length=519
Score = 422 bits (1086), Expect = 2e-146
Identities = 230/521 (44%), Positives = 338/521 (65%), Gaps = 11/521 (2%)
Query 4 EWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMRLIL 63
E DPS W GL TL++LEIVLGIDNLVF+AIL+EKLPP +++ AR++GL AL MRL L
Sbjct 2 ELFLDPSTWAGLLTLIILEIVLGIDNLVFVAILSEKLPPCKQDKARLIGLSFALFMRLGL 61
Query 64 LASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEENPV 123
LA ++W+VTLT + FSGRDLILLFGG+FLLFK T+ELHERL+ + E N
Sbjct 62 LALMSWMVTLTSEIISNKYFSFSGRDLILLFGGLFLLFKATIELHERLDNDIQKNENNKH 121
Query 124 HATFWMVIVQIVVLDAVFSLDSVITAVGMVKHLPVMMIAVIIAVGIMLWASKPLMDFVNK 183
+A FW +++QIV+LD++FSLD++ITAVG + +LP+MMIAV+IA+ +ML ASKPL F+N
Sbjct 122 YAGFWTIVIQIVILDSIFSLDAIITAVGTINNLPIMMIAVVIAMVLMLIASKPLTKFINL 181
Query 184 HPTVVILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMNQTMRHNQEKSVTT 243
H TVV+LCLSFL+MIG +LV E GF++PKGYLYAAIGF+++IE+ NQ R N +
Sbjct 182 HQTVVVLCLSFLLMIGCNLVSEALGFYVPKGYLYAAIGFSIIIEIFNQIARRNFMLHQSR 241
Query 244 TDLRYRTASAVMKMLGGKNSSNGSD--SQKNENENVLATQAFADEVFDEENSVYHSVMVQ 301
+R R A A+++++ G N + S KN+++ + + E F EE M+
Sbjct 242 RPMRQRAAEAILRLMIGDQFRNTTTNISTKNKDKEKIRNRTTDTESFKEE----ERYMIN 297
Query 302 GVLGLAERPVKSVMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARGELDNIEGITLT 361
GVL LA R ++S+MTPR EI W+++ ++ +LL HS V +G+LD + GI
Sbjct 298 GVLTLAARSIRSIMTPRNEISWVNIYQPKNKIRSQLLDTPHSLFPVCKGQLDEVIGIVRA 357
Query 362 HKVLNEYIET-GVLNFSHHLREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIV 420
++L T +++FS P+I+ + + ++ LR+A + IV NE+G+++G++
Sbjct 358 KELLVALERTINIIDFS-STTLPIIIPDTLDPINLLGVLRRAKGSLVIVTNEFGAVQGLI 416
Query 421 TPIDVLEAIAGEFPDEDELEAAAESLEDGSLILEGSTDIRHVSLLLN-RDLVDESEEYST 479
TP+DVLEAIAGEFPD DE E S +++G TD+ + LN +L+ + Y++
Sbjct 417 TPLDVLEAIAGEFPDADETPDII--FEKDSWLVKGGTDLHSLQQCLNITNLIKQENSYAS 474
Query 480 LSGYILFHLGRLPENGQKMHADGYIFEVVTMDGHKIEKVHI 520
L+G ++ G+LP G+ + F ++ ++I V I
Sbjct 475 LAGLLIAQKGQLPLPGETIVIPPLRFYILEATQYRINLVRI 515
>P43932 UPF0053 protein HI_0056 [Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=237
Score = 266 bits (681), Expect = 1e-89
Identities = 125/233 (54%), Positives = 177/233 (76%), Gaps = 0/233 (0%)
Query 2 IFEWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMRL 61
+FEW++DP AW+ L TL LEIVLGIDN++FI IL +LP QR + RI+GL LA+ R+
Sbjct 1 MFEWIADPEAWISLVTLAALEIVLGIDNIIFINILVGRLPERQRQSGRILGLALAMLTRI 60
Query 62 ILLASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEEN 121
+LL S+AW++ LT PLF +F+ SGRDLILL GG+FL+ K + E+ E + ++ + E+
Sbjct 61 LLLMSLAWIMKLTAPLFTVFNQEISGRDLILLIGGLFLIIKSSGEIKEAINHQEHHESES 120
Query 122 PVHATFWMVIVQIVVLDAVFSLDSVITAVGMVKHLPVMMIAVIIAVGIMLWASKPLMDFV 181
++ V++QI VLD VFSLDSVITAVGM HLPVM++A++IAVG+M++A+KP+ DFV
Sbjct 121 KNKVSYLGVLIQIAVLDIVFSLDSVITAVGMASHLPVMILAIMIAVGVMMFAAKPIGDFV 180
Query 182 NKHPTVVILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMNQTMR 234
+ HPT+ IL L+FL+++G SL+ E HIPKGY+Y A+GF+V++EM+N MR
Sbjct 181 DTHPTLKILALAFLVLVGISLIAESLDIHIPKGYIYFAMGFSVVVEMINIRMR 233
>P67127 UPF0053 inner membrane protein YgdQ [Escherichia coli
(strain K12)]
Length=237
Score = 249 bits (636), Expect = 6e-83
Identities = 121/230 (53%), Positives = 174/230 (76%), Gaps = 2/230 (1%)
Query 1 MIFEWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMR 60
M+F W++DP+AW+ L TL +LEIVLGIDN++F++++ KLP QR AR +GL A+ MR
Sbjct 1 MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMR 60
Query 61 LILLASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEE 120
L LLASIAWV LT PLF IF S RDLILL GG+FL++K + E+HE +EG++ +
Sbjct 61 LALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESIEGEEEGLKT 120
Query 121 NPVHATFWMVIVQIVVLDAVFSLDSVITAVGMVKHLPVMMIAVIIAVGIMLWASKPLMDF 180
++F IVQI++LD +FSLDSVITAVG+ HL +MM AV+IAVG+M++A++ + DF
Sbjct 121 RV--SSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGDF 178
Query 181 VNKHPTVVILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMN 230
V +HP+V +L LSFL+++GF+L++E F H+PKGY+Y A+ F++ +E +N
Sbjct 179 VERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLN 228
>P67128 UPF0053 inner membrane protein YgdQ [Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=237
Score = 249 bits (636), Expect = 6e-83
Identities = 121/230 (53%), Positives = 174/230 (76%), Gaps = 2/230 (1%)
Query 1 MIFEWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMR 60
M+F W++DP+AW+ L TL +LEIVLGIDN++F++++ KLP QR AR +GL A+ MR
Sbjct 1 MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMR 60
Query 61 LILLASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEE 120
L LLASIAWV LT PLF IF S RDLILL GG+FL++K + E+HE +EG++ +
Sbjct 61 LALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESIEGEEEGLKT 120
Query 121 NPVHATFWMVIVQIVVLDAVFSLDSVITAVGMVKHLPVMMIAVIIAVGIMLWASKPLMDF 180
++F IVQI++LD +FSLDSVITAVG+ HL +MM AV+IAVG+M++A++ + DF
Sbjct 121 RV--SSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGDF 178
Query 181 VNKHPTVVILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMN 230
V +HP+V +L LSFL+++GF+L++E F H+PKGY+Y A+ F++ +E +N
Sbjct 179 VERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLN 228
>P67129 UPF0053 inner membrane protein YgdQ [Escherichia coli
O157:H7]
Length=237
Score = 249 bits (636), Expect = 6e-83
Identities = 121/230 (53%), Positives = 174/230 (76%), Gaps = 2/230 (1%)
Query 1 MIFEWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMR 60
M+F W++DP+AW+ L TL +LEIVLGIDN++F++++ KLP QR AR +GL A+ MR
Sbjct 1 MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMR 60
Query 61 LILLASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEE 120
L LLASIAWV LT PLF IF S RDLILL GG+FL++K + E+HE +EG++ +
Sbjct 61 LALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESIEGEEEGLKT 120
Query 121 NPVHATFWMVIVQIVVLDAVFSLDSVITAVGMVKHLPVMMIAVIIAVGIMLWASKPLMDF 180
++F IVQI++LD +FSLDSVITAVG+ HL +MM AV+IAVG+M++A++ + DF
Sbjct 121 RV--SSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGDF 178
Query 181 VNKHPTVVILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMN 230
V +HP+V +L LSFL+++GF+L++E F H+PKGY+Y A+ F++ +E +N
Sbjct 179 VERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLN 228
>Q48446 Uncharacterized 18.9 kDa protein in cps region [Klebsiella
pneumoniae]
Length=170
Score = 213 bits (543), Expect = 4e-70
Identities = 107/152 (70%), Positives = 124/152 (82%), Gaps = 0/152 (0%)
Query 4 EWMSDPSAWVGLATLVVLEIVLGIDNLVFIAILAEKLPPEQRNTARIVGLILALGMRLIL 63
EW++DPS W GL TLVV+E+VLGIDNLVFIAILAEKLPP QR+ ARI GL+LA+GMRL+L
Sbjct 17 EWIADPSIWAGLVTLVVIELVLGIDNLVFIAILAEKLPPAQRDRARITGLMLAMGMRLLL 76
Query 64 LASIAWVVTLTEPLFHIFDHPFSGRDLILLFGGVFLLFKGTMELHERLEGKQFQKEENPV 123
LASI+W+VTLT+PL D FS RDLI+LFGG+FLLFK T+EL+ERLEGK
Sbjct 77 LASISWLVTLTKPLIVFHDFSFSARDLIMLFGGLFLLFKATVELNERLEGKDSDNPTQRK 136
Query 124 HATFWMVIVQIVVLDAVFSLDSVITAVGMVKH 155
A FW V+ QIVVLDA+FSLDSVITAVGMV H
Sbjct 137 GAKFWAVVAQIVVLDAIFSLDSVITAVGMVDH 168
>Q48445 UPF0053 protein in cps region [Klebsiella pneumoniae]
Length=320
Score = 181 bits (459), Expect = 9e-56
Identities = 114/317 (36%), Positives = 181/317 (57%), Gaps = 16/317 (5%)
Query 188 VILCLSFLMMIGFSLVVEGFGFHIPKGYLYAAIGFAVLIEMMNQTMRHNQEKSVTTT-DL 246
+ILCLSFL+MIGFSL+ EGF F IPKGYLYAAIGF+V+IE +NQ + N+ + ++ L
Sbjct 1 MILCLSFLLMIGFSLIAEGFSFIIPKGYLYAAIGFSVMIEALNQLAQFNRRRFLSANMTL 60
Query 247 RYRTASAVMKMLGGKNSSNGSDSQKNENENVLATQAFADEVFDEENSVYHSVMVQGVLGL 306
R RT AVM +L G+ D+ AD+ + +M++ VL L
Sbjct 61 RQRTTEAVMNLLSGQKEKAELDAD--------TASLVADQDQHPLFNPQERLMIERVLNL 112
Query 307 AERPVKSVMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARGELDNIEGITLTHKV-- 364
+R V S+MT R +IE I+L E ++ + H+RL+V G+ DN + + + H +
Sbjct 113 NQRSVSSIMTSRHDIERINLSAPEEEIRSLVEKNQHTRLVVTGGK-DNEDLLGVVHVIDL 171
Query 365 LNEYIETGVLNFSHHLREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIVTPID 424
L + + L+ +R+P++ E +L +EQ RQA A V++E+GS+EGIVT D
Sbjct 172 LQQSLRQEPLDLQALVRQPLVFPEGLPLLSALEQFRQARTHFAFVVDEFGSVEGIVTLSD 231
Query 425 VLEAIAGEFPDE-DELEAA--AESLEDGSLILEGSTDIRHVSLLLNRDLVDESEEYSTLS 481
V+E IAG P+E +E++A + +DGS + G + + + L D+ EY T++
Sbjct 232 VMETIAGNLPNEVEEIDARHDIQHHQDGSWTVNGHMPLEDLVQYVPLPL-DDKREYHTVA 290
Query 482 GYILFHLGRLPENGQKM 498
G ++ +L +P+ G+ +
Sbjct 291 GLLMEYLQHVPQWGRPL 307
>P0AE45 Polyamine export protein [Escherichia coli (strain K12)]
Length=447
Score = 112 bits (281), Expect = 6e-30
Identities = 63/222 (28%), Positives = 118/222 (53%), Gaps = 3/222 (1%)
Query 299 MVQGVLGLAERPVKSVMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARGELDNIEGI 358
+++ V L R V S MTPR + W DL + LK ++ HS+ +V ++D+I G
Sbjct 200 LIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGY 259
Query 359 TLTHKVLNEYI--ETGVLNFSHHLREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSI 416
+ +LN + ++ LN +R +IV + + +E + A A+++NEY +
Sbjct 260 VDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALV 319
Query 417 EGIVTPIDVLEAIAGEFPDEDELEAAAESLEDGSLILEGSTDIRHVSLLLNRDLVDESEE 476
GI+T DV+ + G+ + LE + ++ S +++G T I V +L+ D +S
Sbjct 320 VGIITLNDVMTTLMGDLVGQG-LEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGN 378
Query 477 YSTLSGYILFHLGRLPENGQKMHADGYIFEVVTMDGHKIEKV 518
Y T+ G+++F L ++P+ + GY FEVV +D ++I+++
Sbjct 379 YETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQL 420
>A0A0F6BAS6 Polyamine export protein [Salmonella typhimurium (strain
14028s / SGSC 2262)]
Length=447
Score = 111 bits (277), Expect = 2e-29
Identities = 63/222 (28%), Positives = 118/222 (53%), Gaps = 3/222 (1%)
Query 299 MVQGVLGLAERPVKSVMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARGELDNIEGI 358
+++ V L R V S MT R I W DL + LK+++ HS+ +V ++D+I G
Sbjct 200 LIENVFELESRTVPSSMTSRESIIWFDLHEDEQSLKKKVAEHPHSKFLVCNEDIDHIIGY 259
Query 359 TLTHKVLNEYI--ETGVLNFSHHLREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSI 416
+ +LN + ++ LN +R +IV + + +E + A A+++NEY +
Sbjct 260 VDSKDLLNRVLANQSMALNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALV 319
Query 417 EGIVTPIDVLEAIAGEFPDEDELEAAAESLEDGSLILEGSTDIRHVSLLLNRDLVDESEE 476
GI+T DV+ + G+ + LE + ++ S +++G T I V +L+ D +S
Sbjct 320 VGIITLNDVMTTLMGDLVGQG-LEEQIVARDENSWLVDGGTPIDDVMRVLDIDEFPQSGN 378
Query 477 YSTLSGYILFHLGRLPENGQKMHADGYIFEVVTMDGHKIEKV 518
Y T+ G+++F L ++P+ + GY FEVV +D ++I+++
Sbjct 379 YETIGGFMMFMLRKIPKRTDSVKFSGYKFEVVDIDNYRIDQL 420
>P0A2L3 Magnesium and cobalt efflux protein CorC [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=292
Score = 102 bits (254), Expect = 2e-27
Identities = 74/265 (28%), Positives = 132/265 (50%), Gaps = 12/265 (5%)
Query 271 KNENENV-LATQAFADEVFDEENSVYHSVMVQGVLGLAERPVKSVMTPRPEIEWIDLDVA 329
KN +E + L + +E+ DE+ M++GV+ +A++ V+ +M PR ++ + +
Sbjct 32 KNRDELLALIRDSGQNELIDEDTRD----MLEGVMDIADQRVRDIMIPRSQMITLKRNQT 87
Query 330 PELLKERLLTMTHSRLIVARGELDNIEGITLTHKVLNEYIETGVLNFSHH--LREPVIVH 387
+ + ++ HSR V + D+IEGI + +L ++ + FS LR V+V
Sbjct 88 LDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLL-PFMRSDAEAFSMDKVLRTAVVVP 146
Query 388 ENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIVTPIDVLEAIAGEFPDE--DELEAAAES 445
E+ +V ++++ R MAIV++E+G + G+VT D+LE I GE DE +E +
Sbjct 147 ESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQ 206
Query 446 LEDGSLILEGSTDIRHVSLLLNRDLVDESEEYSTLSGYILFHLGRLPENGQKMHADGYIF 505
L + + I + D EE T+ G ++ G LP G+ + DGY F
Sbjct 207 LSRHTWTIRALASIEDFNDAFGTHFSD--EEVDTIGGLVMQAFGHLPARGETIDIDGYQF 264
Query 506 EVVTMDGHKIEKVHIVADPDAGKEK 530
+V D +I +VH+ D+ + K
Sbjct 265 KVAMADSRRIIQVHVRIPDDSPQPK 289
>Q54318 Hemolysin C [Brachyspira hyodysenteriae]
Length=268
Score = 95.1 bits (235), Expect = 5e-25
Identities = 70/283 (25%), Positives = 139/283 (49%), Gaps = 22/283 (8%)
Query 254 VMKMLGGKNSSNGSDSQKNENENVLATQAFADEVFDEENSVYHSVMVQGVLGLAERPVKS 313
+ K++ SD++KN N+ A E+ + + L + V+
Sbjct 3 IKKLISKIVKKKDSDTEKNNYINLSALTEAEREI------------ITNTIELKSKSVRE 50
Query 314 VMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARGELDNIEGITLTHKVLNEYIETGV 373
+M PR ++ I ++ + + + + +SR+ V + +D+I G+ + + I+
Sbjct 51 IMVPRVDVVMIPMESSYDKVIKAFNRDRNSRIPVYKDGIDDIVGVLY----VKDLIDAEE 106
Query 374 LNFSHH--LREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIVTPIDVLEAIAG 431
NFS L +P+ V + ++ +++ R+ + +A+V++EYG GIV+ DVLE I G
Sbjct 107 KNFSLKKILHKPLFVPISISLMELLKNFREKQIHIAMVVDEYGGFSGIVSMEDVLEQIIG 166
Query 432 EFPDE-DELEAAAESLEDGSLILEGSTDIRHVSLLLNRDLVDESEEYSTLSGYILFHLGR 490
+ DE DE + +S +DG+ +++ T I + + + +E T+ G++ +LGR
Sbjct 167 DIRDEYDEEDEEIKSNDDGTYLVDARTRIDDFNKYEILPPIPD-DEADTVGGFLFSYLGR 225
Query 491 LPENGQKMHADGYIFEVVTMDGHKIEKVHI--VADPDAGKEKD 531
LP+ + + +GY F VV G+ + K+ I + + K KD
Sbjct 226 LPKRNEDIEYNGYSFTVVGKSGNIVTKIRIEKLKKDNTAKNKD 268
>P54428 UPF0053 protein YrkA [Bacillus subtilis (strain 168)]
Length=434
Score = 91.3 bits (225), Expect = 8e-23
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 14/279 (5%)
Query 250 TASAVMKMLGGKNSSNGSDSQKNENENVLATQAFADEVFDEENSVYHSVMVQGVLGLAER 309
+A ++ + G K +S + E +L ++++ ++ Y V + ER
Sbjct 159 SARFIVGLFGLKPASEHELAHSEEELRILLSESYKSGEINQNELKY----VNNIFEFDER 214
Query 310 PVKSVMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARGELDNIEGITLTHKVLNEYI 369
K +M PR EI I + + E + + + T +++R V G+ D+I G + L+ YI
Sbjct 215 IAKEIMIPRREIVAISSEDSYETIVKIIKTESYTRYPVLNGDKDSIIGFINAKEFLSAYI 274
Query 370 ETGV-----LNFSHHLREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIVTPID 424
+T +H+ + V E+ + V+ ++++ +AI+++EYG G+VT D
Sbjct 275 DTDQKIKEDFKLENHINPVIHVIESVPIHDVLVKMQKERTHIAILVDEYGGTSGLVTAED 334
Query 425 VLEAIAGEFPDEDELEAA--AESLEDGSLILEGSTDIRHVSLLLNRDLVDESEEYSTLSG 482
+LE I GE DE + + + D IL+ I V+ LL L S+E T+ G
Sbjct 335 ILEEIVGEIRDEFDKDEVPNIRKVNDNHYILDSKVLIEDVNDLLGTTLA--SDEVDTIGG 392
Query 483 YILFHLGRLPENGQKMHADGYIFEVVTMDGHKIEKVHIV 521
+ + G + ADGYIF+V G I + IV
Sbjct 393 WFMTQQIDAAV-GSVIEADGYIFKVHETVGRHINYLEIV 430
>P37908 UPF0053 inner membrane protein YfjD [Escherichia coli
(strain K12)]
Length=428
Score = 82.0 bits (201), Expect = 8e-20
Identities = 67/272 (25%), Positives = 127/272 (47%), Gaps = 13/272 (5%)
Query 254 VMKMLGGKNSSNGSDSQKNENENVLATQAFADEVFDEENSVYHSVMVQGVLGLAERPVKS 313
+M+M+G K S S E + ++ + + S + M+ VL L + V
Sbjct 153 LMRMMGIKTDIVVSGSLSKEELRTIVHESRS------QISRRNQDMLLSVLDLEKMTVDD 206
Query 314 VMTPRPEIEWIDLDVAPELLKERLLTMTHSRLIVARGELDNIEGITLTHKVLNEYIETGV 373
+M PR EI ID++ + + +L H R+++ R LD+ + + E
Sbjct 207 IMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKE 266
Query 374 LNFSHHLR---EPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIVTPIDVLEAIA 430
LR E V E + + + ++ ++ +V+NEYG I+G+VT D+LE I
Sbjct 267 FTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIV 326
Query 431 GEFPDEDELEAAAE--SLEDGSLILEGSTDIRHVSLLLNRDLVDESEEYSTLSGYILFHL 488
G+F A E DGS+I++G+ ++R ++ N L + ++ T++G IL L
Sbjct 327 GDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPE--DDARTVNGVILEAL 384
Query 489 GRLPENGQKMHADGYIFEVVTMDGHKIEKVHI 520
+P G ++ Y +++ + + I++V +
Sbjct 385 EEIPVAGTRVRIGEYDIDILDVQDNMIKQVKV 416
>O05961 Hemolysin C [Rickettsia prowazekii (strain Madrid E)]
Length=303
Score = 79.0 bits (193), Expect = 3e-19
Identities = 51/227 (22%), Positives = 112/227 (49%), Gaps = 5/227 (2%)
Query 299 MVQGVLGLAERPVKSVMTPRPEIEWIDLDVAPELLKERL-LTMTHSRLIVARGELDNIEG 357
++ +L L ++ V+ +M PR +I I L E L E + + + H+R ++ G LDN+ G
Sbjct 65 ILANLLKLEDKIVEDIMVPRSDIIAIKLTTNLEELSESIKIAVPHTRTLIYDGTLDNVVG 124
Query 358 ITLTHKVLNEYIETGVLNFSHHLREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIE 417
+ +R+ +I + ++L ++ ++R+ +AIV++EYG +
Sbjct 125 FIHIKDLFKALATKQNSPLKRLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVVDEYGGTD 184
Query 418 GIVTPIDVLEAIAGEFPDEDELE---AAAESLEDGSLILEGSTDIRHVSLLLNRDLVDES 474
G+VT D++E I G DE + + A + + + ++I ++ + ++ L ++
Sbjct 185 GLVTIEDLIEEIVGRIDDEHDQQLDSANFKVINNSTIIANARIEVELLEEIIGEKLKNDD 244
Query 475 EEYSTLSGYILFHLGRLPENGQKMH-ADGYIFEVVTMDGHKIEKVHI 520
+E+ T+ G +L + +P G ++ ++ EV +++V I
Sbjct 245 DEFDTIGGLVLTRVSSVPAIGTRIDISENIEIEVTDATPRSLKQVKI 291
Score = 18.5 bits (36), Expect = 9.9
Identities = 15/49 (31%), Positives = 22/49 (45%), Gaps = 7/49 (14%)
Query 35 ILAEKLPPEQRNTARIVGLIL-------ALGMRLILLASIAWVVTLTEP 76
I+ EKL + I GL+L A+G R+ + +I VT P
Sbjct 235 IIGEKLKNDDDEFDTIGGLVLTRVSSVPAIGTRIDISENIEIEVTDATP 283
>Q68W10 Hemolysin C [Rickettsia typhi (strain ATCC VR-144 / Wilmington)]
Length=305
Score = 77.4 bits (189), Expect = 1e-18
Identities = 48/227 (21%), Positives = 111/227 (49%), Gaps = 5/227 (2%)
Query 299 MVQGVLGLAERPVKSVMTPRPEIEWIDLDVAPELLKERL-LTMTHSRLIVARGELDNIEG 357
++ +L L + V+ +M PR +I I L L E + + + H+R ++ G LDN+ G
Sbjct 65 ILANLLQLENKTVEDIMVPRSDIVAIKLTTNLAELSESIKIEVPHTRTLIYDGTLDNVVG 124
Query 358 ITLTHKVLNEYIETGVLNFSHHLREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIE 417
+ +R+ +I + ++L ++ ++R+ +AIV++EYG +
Sbjct 125 FIHIKDLFKALATKQNSTLKRLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVVDEYGGTD 184
Query 418 GIVTPIDVLEAIAGEFPDEDELEAAAES---LEDGSLILEGSTDIRHVSLLLNRDLVDES 474
G+VT D++E I G DE + + + + + + ++I ++ + ++ + ++
Sbjct 185 GLVTIEDLIEEIVGRIDDEHDQQLDSTNFKVINNSTIIANARIEVELLEEIIKEKIKNDD 244
Query 475 EEYSTLSGYILFHLGRLPENGQKMH-ADGYIFEVVTMDGHKIEKVHI 520
+E+ T+ G +L + +P G ++ ++ EV+ +++V I
Sbjct 245 DEFDTIGGLVLTRVSSVPAIGTRIDISENIEIEVIDATPRSLKQVKI 291
Lambda K H a alpha
0.323 0.139 0.402 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3507086
Database: 0cfc6de50696b23cab9f90b814ad4ed8.SwissProt.fasta
Posted date: May 30, 2024 10:47 AM
Number of letters in database: 8,525
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
