Comparative Genomics

ACIAD0242 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: c84fb8fbad2ec0c554d702648ebdd0c8.SwissProt.fasta
           18 sequences; 8,432 total letters



Query= ACIAD0242

Length=496
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P57015 Uncharacterized protein YifB [Salmonella typhimurium (stra...  442     6e-155
P45049 Competence protein ComM [Haemophilus influenzae (strain AT...  442     6e-155
P22787 Uncharacterized protein YifB [Escherichia coli (strain K12)]   439     7e-154
P68908 Uncharacterized protein Mb2921c [Mycobacterium bovis (stra...  301     4e-100
P9WPR1 Uncharacterized protein Rv2897c [Mycobacterium tuberculosi...  301     4e-100
P9WPR0 Uncharacterized protein MT2965 [Mycobacterium tuberculosis...  298     8e-99 
Q9ZGE6 Magnesium-chelatase 67 kDa subunit [Heliobacterium mobile]     45.8    3e-08 
Q5XF33 Magnesium-chelatase subunit ChlI-2, chloroplastic [Arabido...  45.4    3e-08 
P56304 Magnesium-chelatase subunit ChlI [Chlorella vulgaris]          43.9    9e-08 
A4WDR5 Anaerobic nitric oxide reductase transcription regulator N...  43.1    2e-07 
P42425 Lon protease 2 [Bacillus subtilis (strain 168)]                43.1    2e-07 
O22436 Magnesium-chelatase subunit ChlI, chloroplastic [Nicotiana...  42.4    3e-07 
P93162 Magnesium-chelatase subunit ChlI, chloroplastic [Glycine max]  41.6    6e-07 
P29959 Cytochrome c biogenesis ATP-binding export protein CcmA [R...  40.4    7e-07 
P37013 Anaerobic nitric oxide reductase transcription regulator N...  40.4    1e-06 
B1XCN6 Anaerobic nitric oxide reductase transcription regulator N...  40.4    1e-06 
Q53RM0 Magnesium-chelatase subunit ChlI, chloroplastic [Oryza sat...  40.0    2e-06 
P16127 Magnesium-chelatase subunit ChlI-1, chloroplastic [Arabido...  39.7    2e-06 


>P57015 Uncharacterized protein YifB [Salmonella typhimurium (strain 
LT2 / SGSC1412 / ATCC 700720)]
Length=506

 Score = 442 bits (1137),  Expect = 6e-155
 Identities = 247/505 (49%), Positives = 328/505 (65%), Gaps = 25/505 (5%)

Query  1    MSFAKIFTRGVLGLHAPQIEVEVHLSQGLPSLTIVGLPEAAVRESKDRVRSAIINSGFQF  60
            MS A + TR  LG++AP I +EVH+S GLP LT+VGLPE  V+E++DRVRSAIINSG++F
Sbjct  1    MSLAIVHTRAALGVNAPPITIEVHISNGLPGLTMVGLPETTVKEARDRVRSAIINSGYEF  60

Query  61   PTKRLTINLAPADLPKDGSRLDLPIALGILIASGQLPEGCTDQYELIGELALDGHLRPVT  120
            P K++TINLAPADLPK+G R DLPIA+ +L AS QL     + YEL+GELAL G LR V 
Sbjct  61   PAKKITINLAPADLPKEGGRYDLPIAVALLAASEQLTASNLEAYELVGELALTGALRGVP  120

Query  121  SALTIAIACQQAKHQLIAPDENGQEIGQLPDFSSYTAAHLKQVC---------EHFLKIT  171
             A++ A    +A   +I   EN  E+G +     + A HL+ VC         E  L   
Sbjct  121  GAISSATEAIRAGRNIIVATENAAEVGLISKEGCFIADHLQTVCAFLEGKHALERPLAQD  180

Query  172  LLSPNKTAVLNTQHRYSLDLADVKGQLRPRRALEIAAAGGHSLLFRGPPGTGKTLLASRL  231
            + SP  TA          DL DV GQ + +R LEI AAGGH+LL  GPPGTGKT+LASRL
Sbjct  181  MASPTATA----------DLRDVIGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRL  230

Query  232  PSILPPLTPQENLEVASIYSIAN---TSHPFGLRPFRAPHHTASAIALVGGGSNPKPGEI  288
              ILPPL+ +E LE A+I S+ N       +  RPFR+PHH+AS  A+VGGG+ P PGEI
Sbjct  231  SGILPPLSNEEALESAAILSLVNADTVQKRWQQRPFRSPHHSASLTAMVGGGAIPAPGEI  290

Query  289  TLSHLGVLFLDELPEFDRKVLEVLRQPLEAKEITISRAARQISFPANFQLIAAMNPCPCG  348
            +L+H G+LFLDELPEF+R+ L+ LR+P+E+ +I +SR   +I++PA FQLIAAMNP P G
Sbjct  291  SLAHNGILFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLIAAMNPSPTG  350

Query  349  YAFSQDQRCQCTPEAIRRYQARISGPLLDRIDLHIDVP-PLQANELQSTAPTENSASVRV  407
            +   Q    +CTPE   RY  R+SGP LDR DL +++P P      Q  +  E+SA+V+ 
Sbjct  351  H--YQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSQHASKGESSATVKK  408

Query  408  RVENAYTYQIKRQNCLNQALTPRQLEEIAQLSPASQKIMALAQQKLNLSARSYHRILRVA  467
            RV  A+  Q +RQ  LN  L  R++++   L     + +      L LS R++ R+L+VA
Sbjct  409  RVIAAHERQYRRQKKLNARLEGREIQKYCVLHHDDARWLEDTLVHLGLSIRAWQRLLKVA  468

Query  468  RTIADLEQSPEIERHHLNEALSYRS  492
            RTIAD+E + +I R HL EA+SYR+
Sbjct  469  RTIADIELADQISRQHLQEAVSYRA  493


>P45049 Competence protein ComM [Haemophilus influenzae (strain 
ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=509

 Score = 442 bits (1137),  Expect = 6e-155
 Identities = 248/501 (50%), Positives = 328/501 (65%), Gaps = 12/501 (2%)

Query  1    MSFAKIFTRGVLGLHAPQIEVEVHLSQGLPSLTIVGLPEAAVRESKDRVRSAIINSGFQF  60
            MS A +++R  +G+ AP + +EVHLS G P  T+VGLPE  V+E++DRVRSA++N+ F++
Sbjct  1    MSLAIVYSRASMGVQAPLVTIEVHLSNGKPGFTLVGLPEKTVKEAQDRVRSALMNAQFKY  60

Query  61   PTKRLTINLAPADLPKDGSRLDLPIALGILIASGQLPEGCTDQYELIGELALDGHLRPVT  120
            P KR+T+NLAPADLPK+G R DLPIA+GIL AS QL      Q+E + ELAL G LR V 
Sbjct  61   PAKRITVNLAPADLPKEGGRFDLPIAIGILAASDQLDASHLKQFEFVAELALTGQLRGVH  120

Query  121  SALTIAIACQQAKHQLIAPDENGQEIGQLPDFSSYTAAHLKQVCEHFL----KITLLSP-  175
              +   +A Q++K +LI   +N  E   + D ++Y A  L  V + FL    K+ L +  
Sbjct  121  GVIPAILAAQKSKRELIIAKQNANEASLVSDQNTYFAQTLLDVVQ-FLNGQEKLPLATEI  179

Query  176  NKTAVLNTQHRYSLDLADVKGQLRPRRALEIAAAGGHSLLFRGPPGTGKTLLASRLPSIL  235
             K + +N   + +LDL D+ GQ   +RAL IAAAG H+LLF GPPGTGKT+LASRL  +L
Sbjct  180  VKESAVNFSGKNTLDLTDIIGQQHAKRALTIAAAGQHNLLFLGPPGTGKTMLASRLTGLL  239

Query  236  PPLTPQENLEVASIYSIANTS---HPFGLRPFRAPHHTASAIALVGGGSNPKPGEITLSH  292
            P +T  E +E AS+ S+       H +  RPFRAPHH+AS  ALVGGG+ PKPGEI+L+ 
Sbjct  240  PEMTDLEAIETASVTSLVQNELNFHNWKQRPFRAPHHSASMPALVGGGTIPKPGEISLAT  299

Query  293  LGVLFLDELPEFDRKVLEVLRQPLEAKEITISRAARQISFPANFQLIAAMNPCPCGYAFS  352
             GVLFLDELPEF+RKVL+ LRQPLE+ EI ISRA  +I FPA FQL+AAMNP P G+   
Sbjct  300  NGVLFLDELPEFERKVLDALRQPLESGEIIISRANAKIQFPARFQLVAAMNPSPTGHYTG  359

Query  353  QDQRCQCTPEAIRRYQARISGPLLDRIDLHIDVPPLQANELQSTAPT-ENSASVRVRVEN  411
               R   +P+ I RY  R+SGP LDR DL I+VP L    LQ+T    E SA VR +V  
Sbjct  360  THNR--TSPQQIMRYLNRLSGPFLDRFDLSIEVPLLPQGSLQNTGDRGETSAQVREKVLK  417

Query  412  AYTYQIKRQNCLNQALTPRQLEEIAQLSPASQKIMALAQQKLNLSARSYHRILRVARTIA  471
                Q++R   +N  L  +++E   +L+      +  A  KL LS R+YHRIL+V+RTIA
Sbjct  418  VREIQMERAGKINAYLNSKEIERDCKLNDKDAFFLEKALNKLGLSVRAYHRILKVSRTIA  477

Query  472  DLEQSPEIERHHLNEALSYRS  492
            DL+   +I + HL EAL YR+
Sbjct  478  DLQGEQQIFQPHLAEALGYRA  498


>P22787 Uncharacterized protein YifB [Escherichia coli (strain 
K12)]
Length=506

 Score = 439 bits (1130),  Expect = 7e-154
 Identities = 245/498 (49%), Positives = 331/498 (66%), Gaps = 11/498 (2%)

Query  1    MSFAKIFTRGVLGLHAPQIEVEVHLSQGLPSLTIVGLPEAAVRESKDRVRSAIINSGFQF  60
            MS + + TR  LG++AP I VEVH+S+GLP LT+VGLPE  V+E++DRVRSAIINSG+++
Sbjct  1    MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEARDRVRSAIINSGYEY  60

Query  61   PTKRLTINLAPADLPKDGSRLDLPIALGILIASGQLPEGCTDQYELIGELALDGHLRPVT  120
            P K++TINLAPADLPK+G R DLPIA+ +L AS QL     D+YEL+GELAL G LR V 
Sbjct  61   PAKKITINLAPADLPKEGGRYDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVP  120

Query  121  SALTIAIACQQAKHQLIAPDENGQEIGQLPDFSSYTAAHLKQVCEHFL--KITLLSPNKT  178
             A++ A    ++  ++I   +N  E+G +       A HL+ VC  FL  K  L  P  T
Sbjct  121  GAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHLQAVCA-FLEGKHALERPKPT  179

Query  179  AVLNTQHRYSLDLADVKGQLRPRRALEIAAAGGHSLLFRGPPGTGKTLLASRLPSILPPL  238
              ++   ++  DL+DV GQ + +R LEI AAGGH+LL  GPPGTGKT+LASR+  +LP L
Sbjct  180  DAVSRALQH--DLSDVIGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDL  237

Query  239  TPQENLEVASIYSIAN---TSHPFGLRPFRAPHHTASAIALVGGGSNPKPGEITLSHLGV  295
            + +E LE A+I S+ N       +  RPFR+PHH+AS  A+VGGG+ P PGEI+L+H GV
Sbjct  238  SNEEALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGV  297

Query  296  LFLDELPEFDRKVLEVLRQPLEAKEITISRAARQISFPANFQLIAAMNPCPCGYAFSQDQ  355
            LFLDELPEF+R+ L+ LR+P+E+ +I +SR   +I++PA FQL+AAMNP P G+   Q  
Sbjct  298  LFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLVAAMNPSPTGH--YQGN  355

Query  356  RCQCTPEAIRRYQARISGPLLDRIDLHIDVPPLQANELQST-APTENSASVRVRVENAYT  414
              +CTPE   RY  R+SGP LDR DL +++P      L  T  P E+SA+V+ RV  A  
Sbjct  356  HNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARE  415

Query  415  YQIKRQNCLNQALTPRQLEEIAQLSPASQKIMALAQQKLNLSARSYHRILRVARTIADLE  474
             Q KRQN LN  L   ++ +  +L       +      L LS R++ R+L+VARTIAD++
Sbjct  416  RQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADID  475

Query  475  QSPEIERHHLNEALSYRS  492
            QS  I R HL EA+SYR+
Sbjct  476  QSDIITRQHLQEAVSYRA  493


>P68908 Uncharacterized protein Mb2921c [Mycobacterium bovis (strain 
ATCC BAA-935 / AF2122/97)]
Length=503

 Score = 301 bits (772),  Expect = 4e-100
 Identities = 198/503 (39%), Positives = 282/503 (56%), Gaps = 18/503 (4%)

Query  1    MSFAKIFTRGVLGLHAPQIEVEVHLSQGLPSLTIVGLPEAAVRESKDRVRSAIINSGFQF  60
            M+  + F+  V GL    +E+E  ++ GLP + +VGLP+AA++ES+DRVR+A+ N G  +
Sbjct  1    MALGRAFSVAVRGLDGEIVEIEADITSGLPGVHLVGLPDAALQESRDRVRAAVTNCGNSW  60

Query  61   PTKRLTINLAPADLPKDGSRLDLPIALGILIASGQLPEGCTDQYELIGELALDGHLRPVT  120
            P  RLT+ L+PA LPK GS  D+ +A  +L A  + P    +   L+GEL+LDG +RPV 
Sbjct  61   PMARLTLALSPATLPKMGSVYDIALAAAVLSAQQKKPWERLENTLLLGELSLDGRVRPVR  120

Query  121  SALTIAIACQQ-AKHQLIAPDENGQEIGQLPDFSSYTAAHLKQVCEHFLKITLLSPNKTA  179
              L   +A ++     ++ P +N  E   +          L Q+ + +L+ +     +  
Sbjct  121  GVLPAVLAAKRDGWPAVVVPADNLPEASLVDGIDVRGVRTLGQL-QSWLRGSTGLAGRIT  179

Query  180  VLNTQHRYSLDLADVKGQLRPRRALEIAAAGGHSLLFRGPPGTGKTLLASRLPSILPPLT  239
              +T    + DLADV GQ + R A+E+AAAG H L+  GPPG GKT+LA RLP +LP L+
Sbjct  180  TADTTPESAADLADVVGQSQARFAVEVAAAGAHHLMLTGPPGVGKTMLAQRLPGLLPSLS  239

Query  240  PQENLEVASIYSIA---NTSHPFGLR-PFRAPHHTASAIALVGGGSN-PKPGEITLSHLG  294
              E+LEV +I+S+A   +   P   R PF APHH++S  ALVGGGS   +PG ++ +H G
Sbjct  240  GSESLEVTAIHSVAGLLSGDTPLITRPPFVAPHHSSSVAALVGGGSGMARPGAVSRAHRG  299

Query  295  VLFLDELPEFDRKVLEVLRQPLEAKEITISRAARQISFPANFQLIAAMNPCPCGYAFSQD  354
            VLFLDE  E     LE LR PLE  EI ++R      +PA FQL+ A NPCPC  A  QD
Sbjct  300  VLFLDECAEISLSALEALRTPLEDGEIRLARRDGVACYPARFQLVLAANPCPCAPADPQD  359

Query  355  QRCQCTPEAIRRYQARISGPLLDRIDLHIDVPPLQANELQSTAPTENSASVRVRVENAYT  414
              C C     RRY  ++SGPLLDR+DL + +  L+A    S A  E+++ VR RV  A  
Sbjct  360  --CICAAATKRRYLGKLSGPLLDRVDLRVQMHRLRAGAF-SAADGESTSQVRQRVALARE  416

Query  415  YQIKRQN----CLNQALTPRQLEEIAQLSPASQKIMALAQQKLNLSARSYHRILRVARTI  470
               +R        N  ++   L    + S A+   +  A  +  LS R   R LRVA ++
Sbjct  417  AAAQRWRPHGFRTNAEVSGPLLRRKFRPSSAAMLPLRTALDRGLLSIRGVDRTLRVAWSL  476

Query  471  ADL--EQSPEIERHHLNEALSYR  491
            ADL    SP I+   +  ALS+R
Sbjct  477  ADLAGRTSPGID--EVAAALSFR  497


>P9WPR1 Uncharacterized protein Rv2897c [Mycobacterium tuberculosis 
(strain ATCC 25618 / H37Rv)]
Length=503

 Score = 301 bits (772),  Expect = 4e-100
 Identities = 198/503 (39%), Positives = 282/503 (56%), Gaps = 18/503 (4%)

Query  1    MSFAKIFTRGVLGLHAPQIEVEVHLSQGLPSLTIVGLPEAAVRESKDRVRSAIINSGFQF  60
            M+  + F+  V GL    +E+E  ++ GLP + +VGLP+AA++ES+DRVR+A+ N G  +
Sbjct  1    MALGRAFSVAVRGLDGEIVEIEADITSGLPGVHLVGLPDAALQESRDRVRAAVTNCGNSW  60

Query  61   PTKRLTINLAPADLPKDGSRLDLPIALGILIASGQLPEGCTDQYELIGELALDGHLRPVT  120
            P  RLT+ L+PA LPK GS  D+ +A  +L A  + P    +   L+GEL+LDG +RPV 
Sbjct  61   PMARLTLALSPATLPKMGSVYDIALAAAVLSAQQKKPWERLENTLLLGELSLDGRVRPVR  120

Query  121  SALTIAIACQQ-AKHQLIAPDENGQEIGQLPDFSSYTAAHLKQVCEHFLKITLLSPNKTA  179
              L   +A ++     ++ P +N  E   +          L Q+ + +L+ +     +  
Sbjct  121  GVLPAVLAAKRDGWPAVVVPADNLPEASLVDGIDVRGVRTLGQL-QSWLRGSTGLAGRIT  179

Query  180  VLNTQHRYSLDLADVKGQLRPRRALEIAAAGGHSLLFRGPPGTGKTLLASRLPSILPPLT  239
              +T    + DLADV GQ + R A+E+AAAG H L+  GPPG GKT+LA RLP +LP L+
Sbjct  180  TADTTPESAADLADVVGQSQARFAVEVAAAGAHHLMLTGPPGVGKTMLAQRLPGLLPSLS  239

Query  240  PQENLEVASIYSIA---NTSHPFGLR-PFRAPHHTASAIALVGGGSN-PKPGEITLSHLG  294
              E+LEV +I+S+A   +   P   R PF APHH++S  ALVGGGS   +PG ++ +H G
Sbjct  240  GSESLEVTAIHSVAGLLSGDTPLITRPPFVAPHHSSSVAALVGGGSGMARPGAVSRAHRG  299

Query  295  VLFLDELPEFDRKVLEVLRQPLEAKEITISRAARQISFPANFQLIAAMNPCPCGYAFSQD  354
            VLFLDE  E     LE LR PLE  EI ++R      +PA FQL+ A NPCPC  A  QD
Sbjct  300  VLFLDECAEISLSALEALRTPLEDGEIRLARRDGVACYPARFQLVLAANPCPCAPADPQD  359

Query  355  QRCQCTPEAIRRYQARISGPLLDRIDLHIDVPPLQANELQSTAPTENSASVRVRVENAYT  414
              C C     RRY  ++SGPLLDR+DL + +  L+A    S A  E+++ VR RV  A  
Sbjct  360  --CICAAATKRRYLGKLSGPLLDRVDLRVQMHRLRAGAF-SAADGESTSQVRQRVALARE  416

Query  415  YQIKRQN----CLNQALTPRQLEEIAQLSPASQKIMALAQQKLNLSARSYHRILRVARTI  470
               +R        N  ++   L    + S A+   +  A  +  LS R   R LRVA ++
Sbjct  417  AAAQRWRPHGFRTNAEVSGPLLRRKFRPSSAAMLPLRTALDRGLLSIRGVDRTLRVAWSL  476

Query  471  ADL--EQSPEIERHHLNEALSYR  491
            ADL    SP I+   +  ALS+R
Sbjct  477  ADLAGRTSPGID--EVAAALSFR  497


>P9WPR0 Uncharacterized protein MT2965 [Mycobacterium tuberculosis 
(strain CDC 1551 / Oshkosh)]
Length=503

 Score = 298 bits (763),  Expect = 8e-99
 Identities = 197/503 (39%), Positives = 281/503 (56%), Gaps = 18/503 (4%)

Query  1    MSFAKIFTRGVLGLHAPQIEVEVHLSQGLPSLTIVGLPEAAVRESKDRVRSAIINSGFQF  60
            M+  + F+  V GL    +E+E  ++ GLP + +VGLP+AA++ES+DRVR+A+ N G  +
Sbjct  1    MALGRAFSVAVRGLDGEIVEIEADITSGLPGVHLVGLPDAALQESRDRVRAAVTNCGNSW  60

Query  61   PTKRLTINLAPADLPKDGSRLDLPIALGILIASGQLPEGCTDQYELIGELALDGHLRPVT  120
            P  RLT+ L+PA LPK GS  D+ +A  +L A  + P    +   L+GEL+LDG +RPV 
Sbjct  61   PMARLTLALSPATLPKMGSVYDIALAAAVLSAQQKKPWERLENTLLLGELSLDGRVRPVR  120

Query  121  SALTIAIACQQ-AKHQLIAPDENGQEIGQLPDFSSYTAAHLKQVCEHFLKITLLSPNKTA  179
              L   +A ++     ++ P +N  E   +          L Q+ + +L+ +     +  
Sbjct  121  GVLPAVLAAKRDGWPAVVVPADNLPEASLVDGIDVRGVRTLGQL-QSWLRGSTGLAGRIT  179

Query  180  VLNTQHRYSLDLADVKGQLRPRRALEIAAAGGHSLLFRGPPGTGKTLLASRLPSILPPLT  239
              +T    + DLADV GQ + R A+E+AAAG H L+   PPG GKT+LA RLP +LP L+
Sbjct  180  TADTTPESAADLADVVGQSQARFAVEVAAAGAHHLMLTVPPGVGKTMLAQRLPGLLPSLS  239

Query  240  PQENLEVASIYSIA---NTSHPFGLR-PFRAPHHTASAIALVGGGSN-PKPGEITLSHLG  294
              E+LEV +I+S+A   +   P   R PF APHH++S  ALVGGGS   +PG ++ +H G
Sbjct  240  GSESLEVTAIHSVAGLLSGDTPLITRPPFVAPHHSSSVAALVGGGSGMARPGAVSRAHRG  299

Query  295  VLFLDELPEFDRKVLEVLRQPLEAKEITISRAARQISFPANFQLIAAMNPCPCGYAFSQD  354
            VLFLDE  E     LE LR PLE  EI ++R      +PA FQL+ A NPCPC  A  QD
Sbjct  300  VLFLDECAEISLSALEALRTPLEDGEIRLARRDGVACYPARFQLVLAANPCPCAPADPQD  359

Query  355  QRCQCTPEAIRRYQARISGPLLDRIDLHIDVPPLQANELQSTAPTENSASVRVRVENAYT  414
              C C     RRY  ++SGPLLDR+DL + +  L+A    S A  E+++ VR RV  A  
Sbjct  360  --CICAAATKRRYLGKLSGPLLDRVDLRVQMHRLRAGAF-SAADGESTSQVRQRVALARE  416

Query  415  YQIKRQN----CLNQALTPRQLEEIAQLSPASQKIMALAQQKLNLSARSYHRILRVARTI  470
               +R        N  ++   L    + S A+   +  A  +  LS R   R LRVA ++
Sbjct  417  AAAQRWRPHGFRTNAEVSGPLLRRKFRPSSAAMLPLRTALDRGLLSIRGVDRTLRVAWSL  476

Query  471  ADL--EQSPEIERHHLNEALSYR  491
            ADL    SP I+   +  ALS+R
Sbjct  477  ADLAGRTSPGID--EVAAALSFR  497


>Q9ZGE6 Magnesium-chelatase 67 kDa subunit [Heliobacterium mobile]
Length=666

 Score = 45.8 bits (107),  Expect = 3e-08
 Identities = 56/229 (24%), Positives = 88/229 (38%), Gaps = 57/229 (25%)

Query  188  SLDLADVKGQLRPRRALEIAAA--GGHSLLFRGPPGTGKTLLASRLPSILPPL-------  238
            +L LA + GQ   + AL +AA   G   +   G  GTGKT+LA  L  +LPP+       
Sbjct  5    TLPLAAITGQEAVKLALTLAAVDPGLKGVAIAGRRGTGKTVLARGLRHLLPPIDQLEGCP  64

Query  239  -------------------TPQENLEVASIYSIANTSHPFGLRPFRAPH-HTASAI----  274
                               T +  L  + +  +   + PF   P  A       AI    
Sbjct  65   CHCNPAEPHSWCNRCRERFTEESGLSDSEV-PVVQRNAPFSEVPLGATEDRLLGAIDVEQ  123

Query  275  ALVGGGSNPKPGEITLSHLGVLFLDELPEFDRKVLEVLRQPLEAKEITISRAARQISFPA  334
            +L GG    +PG +  ++ GVL++D+L   D  ++  L   +      + R    + +P+
Sbjct  124  SLAGGVRAWQPGLLGEANRGVLYIDQLNLLDDGLVNSLFDAMSGT-CRLEREGISVQYPS  182

Query  335  NFQLIAAMNPCPCGYAFSQDQRCQCTPEAIRRYQARISGPLLDRIDLHI  383
            NF LI   +P   G                      + G L DRI +H+
Sbjct  183  NFVLIGTYDPDEGG----------------------LRGHLADRIAMHV  209


 Score = 18.5 bits (36),  Expect = 9.9
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)

Query  71   PADLPKDGSRLDLP  84
            P + PKD   L LP
Sbjct  359  PDEAPKDEQTLQLP  372


>Q5XF33 Magnesium-chelatase subunit ChlI-2, chloroplastic [Arabidopsis 
thaliana]
Length=418

 Score = 45.4 bits (106),  Expect = 3e-08
 Identities = 63/292 (22%), Positives = 106/292 (36%), Gaps = 48/292 (16%)

Query  214  LLFRGPPGTGKTLLASRLPSILPPLTP--------------------QENLEVASIYSIA  253
            ++  G  GTGK+     L  +LP +T                     +E ++     S+ 
Sbjct  109  VMIMGDRGTGKSTTVRSLVDLLPEITVVSGDPYNSDPRDPECMGKEVREKVQKGEELSVI  168

Query  254  NTSH-----PFGLRPFRAPHHTASAIALVGGGSNPKPGEITLSHLGVLFLDELPEFDRKV  308
             T       P G    R         AL  G    +PG +  ++ G+L++DE+   D  +
Sbjct  169  ETKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHL  228

Query  309  LEVLRQPLEAKEITISRAARQISFPANFQLIAAMNPCPCGYAFSQDQRCQCTPEAIRRYQ  368
            ++VL     +   T+ R    IS PA F LI + NP                       +
Sbjct  229  VDVLLDSAASGWNTVEREGISISHPARFILIGSGNP----------------------EE  266

Query  369  ARISGPLLDRIDLHIDVPPLQANELQSTAPTENSASVRVRVENAYTYQIKRQNCLNQALT  428
              +   LLDR  +H  V  ++  EL+     E +       E   TYQ ++     Q  T
Sbjct  267  GELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDSNPKEFRETYQEEQLKLQEQITT  326

Query  429  PRQLEEIAQLSPASQKIMALAQQKLNLSA-RSYHRILRVARTIADLEQSPEI  479
             R      Q+    +  ++    +L++   R    I R AR +A L+   ++
Sbjct  327  ARSNLSAVQIDQDLKVKISKVCAELDVDGLRGDMVINRAARALAALQGRDQV  378


>P56304 Magnesium-chelatase subunit ChlI [Chlorella vulgaris]
Length=354

 Score = 43.9 bits (102),  Expect = 9e-08
 Identities = 39/164 (24%), Positives = 65/164 (40%), Gaps = 22/164 (13%)

Query  275  ALVGGGSNPKPGEITLSHLGVLFLDELPEFDRKVLEVLRQPLEAKEITISRAARQISFPA  334
            AL  G    +PG +  ++ G+L++DE+   D  +++VL     +   T+ R    IS PA
Sbjct  129  ALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPA  188

Query  335  NFQLIAAMNPCPCGYAFSQDQRCQCTPEAIRRYQARISGPLLDRIDLHIDVPPLQANELQ  394
             F L+ + NP                       +  +   LLDR  +H  +  ++   L+
Sbjct  189  RFILVGSGNP----------------------EEGELRPQLLDRFGMHAQIGTVKEPNLR  226

Query  395  STAPTENSASVRVRVENAYTYQIKRQNCLNQALTPRQLEEIAQL  438
                 + +      +E   TYQ  +    NQ L  R L    QL
Sbjct  227  VQIVEQRANFDAAPLEFRETYQDSQAQLGNQILEARNLLPQIQL  270


>A4WDR5 Anaerobic nitric oxide reductase transcription regulator 
NorR [Enterobacter sp. (strain 638)]
Length=504

 Score = 43.1 bits (100),  Expect = 2e-07
 Identities = 39/149 (26%), Positives = 65/149 (44%), Gaps = 14/149 (9%)

Query  196  GQLRPRRALEIAAAGGHSLLFRGPPGTGKTLLASRLPSILP-PLTPQENLEVASIYSIAN  254
            G ++ ++ +EI AA   ++L  G  GTGK L+A  +    P  + P   L  A++     
Sbjct  193  GMMQLKKEIEIVAASDLNVLIGGETGTGKELVAKSIHEASPRAVNPLVYLNCAALPESVA  252

Query  255  TSHPFGLRPFRAPHHTASAIALVGGGSNPKPGEITLSHLGVLFLDELPEFDRKVLEVLRQ  314
             S  FG        H   A     G  + + G+  ++  G LFLDE+ E    +   L +
Sbjct  253  ESELFG--------HVKGAFT---GAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLR  301

Query  315  PLEAKEITISRAARQISFPANFQLIAAMN  343
             L+  +  I R     S   + +++AA N
Sbjct  302  VLQYGD--IQRVGDDRSLRVDVRVLAATN  328


>P42425 Lon protease 2 [Bacillus subtilis (strain 168)]
Length=552

 Score = 43.1 bits (100),  Expect = 2e-07
 Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 27/180 (15%)

Query  193  DVKGQLRPRRALEIAAAGGHS--LLFRGPPGTGKTLLASRLPSILPPLTPQENLEVASIY  250
            D+ GQ    +AL+ A  G +   ++  GPPG GKT  A  +             E A   
Sbjct  70   DIVGQEDGIKALKAALCGPNPQHVIVYGPPGVGKTAAARLVLEEAKKHKQSPFKEQAVFV  129

Query  251  SIANTSHPFGLRPFRAP---------HHTASAIALVGGGSNPKPGEITLSHLGVLFLDEL  301
             +  T+  F  R    P         +  A A+   G    PK G +T +H GVLF+DE+
Sbjct  130  ELDATTARFDERGIADPLIGSVHDPIYQGAGAMGQAGI-PQPKQGAVTHAHGGVLFIDEI  188

Query  302  PEFDRKVLEVLRQPLEAKEITISRA---------------ARQISFPANFQLIAAMNPCP  346
             E     +  + + LE +++ +  A                 Q   PA+F+LI A    P
Sbjct  189  GELHPIQMNKMLKVLEDRKVFLDSAYYSEENTQIPNHIHDIFQNGLPADFRLIGATTRMP  248


 Score = 41.2 bits (95),  Expect = 8e-07
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 18/144 (13%)

Query  18   QIEVEVHLSQGLPSLTIVGLPE--------------AAVRESKDRVRSAIINSGFQFPTK  63
            +IEV V  +Q   S+ I G+ E              +  + S + V + +   G +    
Sbjct  370  EIEVSVTAAQDKGSINITGIAEEESIGSQSKSIRRKSMAKGSVENVLTVLRTMGMKPSDY  429

Query  64   RLTINLAPADLPKDGSRLDLPIALGILIASGQLPEGCTDQYELIGELALDGHLRPVTSAL  123
             + IN  P  +P DG    + +A GI  A  ++P   T    + GE++L+G ++P+   +
Sbjct  430  DIHINF-PGGIPIDGPSAGIAMAAGIFSAIHKIPIDNT--VAMTGEISLNGLVKPIGGVI  486

Query  124  -TIAIACQQAKHQLIAPDENGQEI  146
              I  A Q    ++I P EN Q I
Sbjct  487  PKIKAAKQSGAKKVIIPYENQQAI  510


 Score = 19.6 bits (39),  Expect = 4.3
 Identities = 11/36 (31%), Positives = 18/36 (50%), Gaps = 1/36 (3%)

Query  212  HSLLFRGPPGTGKTLLAS-RLPSILPPLTPQENLEV  246
            H +   G P   + + A+ R+P+ +PP      LEV
Sbjct  227  HDIFQNGLPADFRLIGATTRMPNEIPPAIRSRCLEV  262


>O22436 Magnesium-chelatase subunit ChlI, chloroplastic [Nicotiana 
tabacum]
Length=426

 Score = 42.4 bits (98),  Expect = 3e-07
 Identities = 36/151 (24%), Positives = 63/151 (42%), Gaps = 22/151 (15%)

Query  275  ALVGGGSNPKPGEITLSHLGVLFLDELPEFDRKVLEVLRQPLEAKEITISRAARQISFPA  334
            AL  G    +PG +  ++ G+L++DE+   D  +++VL     +   T+ R    IS PA
Sbjct  203  ALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPA  262

Query  335  NFQLIAAMNPCPCGYAFSQDQRCQCTPEAIRRYQARISGPLLDRIDLHIDVPPLQANELQ  394
             F LI + NP                       +  +   LLDR  +H  V  ++  EL+
Sbjct  263  RFILIGSGNP----------------------EEGELRPQLLDRFGMHAQVGTVRDAELR  300

Query  395  STAPTENSASVRVRVENAYTYQIKRQNCLNQ  425
                 E +   +   E   +Y+ +++   NQ
Sbjct  301  VKIVEERARFDKNPKEFRESYKAEQEKLQNQ  331


 Score = 20.4 bits (41),  Expect = 2.4
 Identities = 14/37 (38%), Positives = 18/37 (49%), Gaps = 7/37 (19%)

Query  39   EAAVRESKDRVRSAIINSGFQFPTKRLTINLAPADLP  75
            E    E +D++RS     G Q P  R  IN+   DLP
Sbjct  157  EVMSAEVRDKLRS-----GQQLPISRTKINM--VDLP  186


>P93162 Magnesium-chelatase subunit ChlI, chloroplastic [Glycine 
max]
Length=421

 Score = 41.6 bits (96),  Expect = 6e-07
 Identities = 37/164 (23%), Positives = 66/164 (40%), Gaps = 22/164 (13%)

Query  275  ALVGGGSNPKPGEITLSHLGVLFLDELPEFDRKVLEVLRQPLEAKEITISRAARQISFPA  334
            AL  G    +PG +  ++ G+L++DE+   D  +++VL     +   T+ R    IS PA
Sbjct  198  ALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPA  257

Query  335  NFQLIAAMNPCPCGYAFSQDQRCQCTPEAIRRYQARISGPLLDRIDLHIDVPPLQANELQ  394
             F LI + NP                       +  +   LLDR  +H  V  ++  EL+
Sbjct  258  RFILIGSGNP----------------------EEGELRPQLLDRFGMHAQVGTVRDAELR  295

Query  395  STAPTENSASVRVRVENAYTYQIKRQNCLNQALTPRQLEEIAQL  438
                 E     +   E   +Y+ +++    Q  + R +    Q+
Sbjct  296  VKIVEERGRFDKNPKEFRDSYKAEQEKLQQQITSARSVLSSVQI  339


>P29959 Cytochrome c biogenesis ATP-binding export protein CcmA 
[Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 
/ SB1003)]
Length=214

 Score = 40.4 bits (93),  Expect = 7e-07
 Identities = 23/68 (34%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query  195  KGQLRPRRALEIAAAGGHSLLFRGPPGTGKTLLASRLPSILPPLTPQENLEVASIYSIAN  254
            +G L     +  + A GH+L+ RGP G GKT L   L  + PPL  + ++       IA 
Sbjct  13   RGGLAVLEGVSFSLAAGHALVLRGPNGIGKTTLLRTLAGLQPPLAGRVSMPPE---GIAY  69

Query  255  TSHPFGLR  262
             +H  GL+
Sbjct  70   AAHADGLK  77


>P37013 Anaerobic nitric oxide reductase transcription regulator 
NorR [Escherichia coli (strain K12)]
Length=504

 Score = 40.4 bits (93),  Expect = 1e-06
 Identities = 35/123 (28%), Positives = 54/123 (44%), Gaps = 16/123 (13%)

Query  196  GQLRPRRALEIAAAGGHSLLFRGPPGTGKTLLASRLPSILP-PLTPQENLEVASIYSIAN  254
            G  + ++ +EI AA   ++L  G  GTGK L+A  +    P  + P   L  A++     
Sbjct  193  GMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVA  252

Query  255  TSHPFGLRPFRAPHHTASAIALVGGGSNPKPGEITLSHLGVLFLDELPE----FDRKVLE  310
             S  FG        H   A     G  + + G+  ++  G LFLDE+ E       K+L 
Sbjct  253  ESELFG--------HVKGAFT---GAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLR  301

Query  311  VLR  313
            VL+
Sbjct  302  VLQ  304


>B1XCN6 Anaerobic nitric oxide reductase transcription regulator 
NorR [Escherichia coli (strain K12 / DH10B)]
Length=504

 Score = 40.4 bits (93),  Expect = 1e-06
 Identities = 35/123 (28%), Positives = 54/123 (44%), Gaps = 16/123 (13%)

Query  196  GQLRPRRALEIAAAGGHSLLFRGPPGTGKTLLASRLPSILP-PLTPQENLEVASIYSIAN  254
            G  + ++ +EI AA   ++L  G  GTGK L+A  +    P  + P   L  A++     
Sbjct  193  GMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVA  252

Query  255  TSHPFGLRPFRAPHHTASAIALVGGGSNPKPGEITLSHLGVLFLDELPE----FDRKVLE  310
             S  FG        H   A     G  + + G+  ++  G LFLDE+ E       K+L 
Sbjct  253  ESELFG--------HVKGAFT---GAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLR  301

Query  311  VLR  313
            VL+
Sbjct  302  VLQ  304


>Q53RM0 Magnesium-chelatase subunit ChlI, chloroplastic [Oryza 
sativa subsp. japonica]
Length=415

 Score = 40.0 bits (92),  Expect = 2e-06
 Identities = 31/120 (26%), Positives = 51/120 (43%), Gaps = 22/120 (18%)

Query  275  ALVGGGSNPKPGEITLSHLGVLFLDELPEFDRKVLEVLRQPLEAKEITISRAARQISFPA  334
            AL  G    +PG +  ++ G+L++DE+   D  +++VL     +   T+ R    IS PA
Sbjct  192  ALTDGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPA  251

Query  335  NFQLIAAMNPCPCGYAFSQDQRCQCTPEAIRRYQARISGPLLDRIDLHIDVPPLQANELQ  394
             F LI + NP                       +  +   LLDR  +H  V  ++  EL+
Sbjct  252  RFILIGSGNP----------------------EEGELRPQLLDRFGMHAQVGTVRDAELR  289


>P16127 Magnesium-chelatase subunit ChlI-1, chloroplastic [Arabidopsis 
thaliana]
Length=424

 Score = 39.7 bits (91),  Expect = 2e-06
 Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 22/156 (14%)

Query  275  ALVGGGSNPKPGEITLSHLGVLFLDELPEFDRKVLEVLRQPLEAKEITISRAARQISFPA  334
            AL  G    +PG +  ++ G+L++DE+   D  +++VL     +   T+ R    IS PA
Sbjct  201  ALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPA  260

Query  335  NFQLIAAMNPCPCGYAFSQDQRCQCTPEAIRRYQARISGPLLDRIDLHIDVPPLQANELQ  394
             F LI + NP                       +  +   LLDR  +H  V  ++  +L+
Sbjct  261  RFILIGSGNP----------------------EEGELRPQLLDRFGMHAQVGTVRDADLR  298

Query  395  STAPTENSASVRVRVENAYTYQIKRQNCLNQALTPR  430
                 E +       +   TY+ ++    +Q  T R
Sbjct  299  VKIVEERARFDSNPKDFRDTYKTEQDKLQDQISTAR  334



Lambda      K        H        a         alpha
   0.320    0.135    0.391    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3297320


  Database: c84fb8fbad2ec0c554d702648ebdd0c8.SwissProt.fasta
    Posted date:  May 30, 2024  5:11 AM
  Number of letters in database: 8,432
  Number of sequences in database:  18



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40