BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 87b117285105d7729765052702f91b96.SwissProt.fasta
           15 sequences; 5,566 total letters



Query= ACIAD0262

Length=353
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P72161 D-alanyl-D-alanine endopeptidase [Pseudomonas aeruginosa (...  213     3e-70
P0AFI6 D-alanyl-D-alanine endopeptidase [Shigella flexneri]           196     7e-64
P0AFI5 D-alanyl-D-alanine endopeptidase [Escherichia coli (strain...  196     7e-64
P38422 D-alanyl-D-alanine carboxypeptidase DacF [Bacillus subtili...  105     8e-29
P08506 D-alanyl-D-alanine carboxypeptidase DacC [Escherichia coli...  105     1e-28
P44664 D-alanyl-D-alanine endopeptidase [Haemophilus influenzae (...  99.0    5e-27
P37604 D-alanyl-D-alanine carboxypeptidase DacD [Salmonella typhi...  100     7e-27
P39042 D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. (str...  94.0    3e-25
P33013 D-alanyl-D-alanine carboxypeptidase DacD [Escherichia coli...  92.0    5e-24
P35150 D-alanyl-D-alanine carboxypeptidase DacB [Bacillus subtili...  89.7    3e-23
P0AEB3 D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli...  85.1    1e-21
P0AEB4 D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli...  85.1    1e-21
P0AEB2 D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli...  85.1    1e-21
P08750 D-alanyl-D-alanine carboxypeptidase DacA [Bacillus subtili...  81.6    2e-20
Q05523 D-alanyl-D-alanine carboxypeptidase DacA [Geobacillus stea...  78.6    2e-19


>P72161 D-alanyl-D-alanine endopeptidase [Pseudomonas aeruginosa 
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / 
LMG 12228 / 1C / PRS 101 / PAO1)]
Length=310

 Score = 213 bits (542),  Expect = 3e-70
 Identities = 127/284 (45%), Positives = 171/284 (60%), Gaps = 28/284 (10%)

Query  69   STSVTTTVRNAAPPSSASSSSPAYVIRDTTNYAAQPSVNARAALVMDAQTGEVLYSKNTN  128
            S SV T V  + PP +                  Q  + + +ALV D  TG+VLYS+N +
Sbjct  14   SLSVATAVSASPPPKAG--------------LPLQQELASGSALVTDQNTGKVLYSRNPD  59

Query  129  TSMPIASLTKLMTAVVTSDARLDMSEEITLEQIDFAGAGGKNSSSTLRVGDKMNRAEVLL  188
              +PIAS+TKLMTA+V  D++L + E + +   + +   G    S +RVG +++R ++LL
Sbjct  60   LVVPIASITKLMTAMVVLDSKLPLDEVLPIAISETSEMRGV--FSRVRVGSQISRRDMLL  117

Query  189  FALMKSENPAAAALARTYPGGRPAFVAAMNAKARQLGMTSTHYVESSGLDPHNVSSARDL  248
             ALM SEN AAA+LA+ YPGG+ AFV AMNAKA  LGM +T YVE +GL  HNVS+ARDL
Sbjct  118  LALMSSENRAAASLAQNYPGGKNAFVKAMNAKAHALGMKNTRYVEPTGLSLHNVSTARDL  177

Query  249  GILVSAASQYGLIRQFSTTPSY-------DFNLGYRVLKSNNTNALVRNGGWNINLSKTG  301
              L+ A+ QY L+ Q+STTP         ++ LG+R     NTN L+ N  WNI L+KTG
Sbjct  178  TRLLVASRQYPLLSQWSTTPEKTVAFRHPNYTLGFR-----NTNHLINNKTWNIQLTKTG  232

Query  302  YINEAGRCVVMHTTVNSRPAVVVLLGASSTQARNNDATNLLNWL  345
            + NEAG C+VM TT+N  P  +V+L A        DAT L  WL
Sbjct  233  FTNEAGHCLVMRTTINRSPVNLVVLDAFGKYTHFADATRLRRWL  276


>P0AFI6 D-alanyl-D-alanine endopeptidase [Shigella flexneri]
Length=310

 Score = 196 bits (499),  Expect = 7e-64
 Identities = 109/248 (44%), Positives = 157/248 (63%), Gaps = 6/248 (2%)

Query  101  AAQPSVNARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSDARLDMSEEITLEQ  160
            A+QP + + +A+++D  T +V+YS + +   PIAS++KLMTA+V  DARL + E++   +
Sbjct  33   ASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKL---K  89

Query  161  IDFAGAGG-KNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVAAMNA  219
            +D +     K   S +R+  +++R ++LL ALM SEN AAA+LA  YPGG  AF+ AMNA
Sbjct  90   VDISQTPEMKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNA  149

Query  220  KARQLGMTSTHYVESSGLDPHNVSSARDLGILVSAASQYGLIRQFSTT--PSYDFNLGYR  277
            KA+ LGM +T +VE +GL  HNVS+ARDL  L+ A+ QY LI Q STT      F+    
Sbjct  150  KAKSLGMNNTRFVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTY  209

Query  278  VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVVVLLGASSTQARNND  337
             L   NTN LV    WNI L+KTG+ N AG C+VM T +N++P  +V++ A        D
Sbjct  210  TLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFAD  269

Query  338  ATNLLNWL  345
            A+ L  W+
Sbjct  270  ASRLRTWI  277


>P0AFI5 D-alanyl-D-alanine endopeptidase [Escherichia coli (strain 
K12)]
Length=310

 Score = 196 bits (499),  Expect = 7e-64
 Identities = 109/248 (44%), Positives = 157/248 (63%), Gaps = 6/248 (2%)

Query  101  AAQPSVNARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSDARLDMSEEITLEQ  160
            A+QP + + +A+++D  T +V+YS + +   PIAS++KLMTA+V  DARL + E++   +
Sbjct  33   ASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKL---K  89

Query  161  IDFAGAGG-KNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVAAMNA  219
            +D +     K   S +R+  +++R ++LL ALM SEN AAA+LA  YPGG  AF+ AMNA
Sbjct  90   VDISQTPEMKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNA  149

Query  220  KARQLGMTSTHYVESSGLDPHNVSSARDLGILVSAASQYGLIRQFSTT--PSYDFNLGYR  277
            KA+ LGM +T +VE +GL  HNVS+ARDL  L+ A+ QY LI Q STT      F+    
Sbjct  150  KAKSLGMNNTRFVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTY  209

Query  278  VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVVVLLGASSTQARNND  337
             L   NTN LV    WNI L+KTG+ N AG C+VM T +N++P  +V++ A        D
Sbjct  210  TLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFAD  269

Query  338  ATNLLNWL  345
            A+ L  W+
Sbjct  270  ASRLRTWI  277


>P38422 D-alanyl-D-alanine carboxypeptidase DacF [Bacillus subtilis 
(strain 168)]
Length=389

 Score = 105 bits (262),  Expect = 8e-29
 Identities = 78/249 (31%), Positives = 132/249 (53%), Gaps = 14/249 (6%)

Query  108  ARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSDA----RLDMSEEITLEQIDF  163
            A++A++++  TG+VLY+KN+N  +  AS+TK+MT ++  +A    ++ MS+++   +   
Sbjct  37   AKSAVLIERDTGKVLYNKNSNERLAPASMTKIMTMLLIMEALDKGKIKMSDKVRTSE-HA  95

Query  164  AGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVAAMNAKARQ  223
            A  GG  S   L  G++M   E+L    + S N A+ A+A    G    FV  MN KA++
Sbjct  96   ASMGG--SQIFLEPGEEMTVKEMLKGIAIASGNDASVAMAEFISGSEEEFVKKMNKKAKE  153

Query  224  LGMTSTHYVESSGL-DPHNVSSARDLGILVSAASQYGLIRQFSTTPSYDFNLGYRVLKS-  281
            LG+ +T +   +GL +  + SSA D+ I+     +Y  I +F  T +Y+  L     K  
Sbjct  154  LGLKNTSFKNPTGLTEEGHYSSAYDMAIMAKELLKYESITKF--TGTYEDYLRENTDKKF  211

Query  282  --NNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVVVLLGASSTQARNNDAT  339
               NTN L++     ++  KTGY  EA  C+       +  A+ V+ GAS+ + RN   T
Sbjct  212  WLVNTNRLIKFYP-GVDGVKTGYTGEAKYCLTASAKKGNMRAIAVVFGASTPKERNAQVT  270

Query  340  NLLNWLAQQ  348
             +L++   Q
Sbjct  271  KMLDFAFSQ  279


 Score = 18.1 bits (35),  Expect = 5.6
 Identities = 26/140 (19%), Positives = 55/140 (39%), Gaps = 17/140 (12%)

Query  62   TVRSPQGSTSVTTTVRNAAPPSSASSSSPAYVIRDTTNYAAQPSVNARAALV-MDAQTGE  120
            T  + +G+      V  A+ P   ++     +    + Y   P       +  +  + G+
Sbjct  242  TASAKKGNMRAIAVVFGASTPKERNAQVTKMLDFAFSQYETHPLYKRNQTVAKVKVKKGK  301

Query  121  VLYSKNTNTSMPIASLTKLMTAVVTSDARLDMSEEITLEQIDFAGAGGKNSSSTLRVGDK  180
              + + T TS PI+ LTK        +   D+ +EI ++          N S+ ++ G +
Sbjct  302  QKFIELT-TSEPISILTK------KGEDMNDVKKEIKMKD---------NISAPIQKGQE  345

Query  181  MNRAEVLLFALMKSENPAAA  200
            +    +     + +E+P AA
Sbjct  346  LGTLVLKKDGEVLAESPVAA  365


>P08506 D-alanyl-D-alanine carboxypeptidase DacC [Escherichia 
coli (strain K12)]
Length=400

 Score = 105 bits (261),  Expect = 1e-28
 Identities = 76/249 (31%), Positives = 134/249 (54%), Gaps = 11/249 (4%)

Query  104  PSVNARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSDA----RLDMSEEITLE  159
            PSV+ARA ++MD  +G+VL   N +  +  ASLTK+MT+ V   A    ++ +++ +T+ 
Sbjct  35   PSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVG  94

Query  160  QIDFA-GAGGKNSSST--LRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVAA  216
            +  +A G      SS   L+ GD+++ A++    +++S N A  ALA    G + +F+  
Sbjct  95   KDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGL  154

Query  217  MNAKARQLGMTSTHYVESSGLD-PHNVSSARDLGILVSAASQYGLIRQFSTTPSYDFNLG  275
            MN  A++LG+T+T +    GLD P   S+ARD+ +L   A  + +  +++     +F   
Sbjct  155  MNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALL-GKALIHDVPEEYAIHKEKEFT--  211

Query  276  YRVLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVVVLLGASSTQARN  335
            +  ++  N N L+ +   N++  KTG    AG  +V   T      + V+LGA + + R 
Sbjct  212  FNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRF  271

Query  336  NDATNLLNW  344
            N++  LL W
Sbjct  272  NESEKLLTW  280


>P44664 D-alanyl-D-alanine endopeptidase [Haemophilus influenzae 
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=292

 Score = 99.0 bits (245),  Expect = 5e-27
 Identities = 77/226 (34%), Positives = 114/226 (50%), Gaps = 5/226 (2%)

Query  108  ARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSDARLDMSEEITLEQIDFAGAG  167
            A++ +V D     VL S  +++  PIAS+TKLMTA V  +   + +  I + + D     
Sbjct  18   AQSYVVYDFTHNRVLESHASDSIQPIASVTKLMTANVFLENNKNPNCRIAITKEDTDRIK  77

Query  168  GKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVAAMNAKARQLGMT  227
            G  +     +    N  E+L   L+ S+N AA AL+R     R  F+  MN KA QLGM 
Sbjct  78   GTGTKLPKNIPISCN--ELLKAMLVHSDNYAAHALSRAAGISRRQFIKKMNEKAHQLGMY  135

Query  228  STHYVESSGLDPHNVSSARDLGILVSAASQYGLIRQFSTTPSYDFNLGYRVLKSNNTNAL  287
            ST + +SSGL  +N+SS  DL  L   +     I++ S   +     G + L   NTN L
Sbjct  136  STRFHDSSGLSSYNISSPMDLVKLAKYSLNKSDIKRLSNLSATYIQAGKQKLYIKNTNKL  195

Query  288  VRNGGWNINLSKTGYINEAGRCVVM---HTTVNSRPAVVVLLGASS  330
            VR+  ++  ++KTGYI E+G  +V    H   N+   V+ L   SS
Sbjct  196  VRDEIFDAAVNKTGYIQESGYNLVFINKHRCKNATIGVISLNNTSS  241


>P37604 D-alanyl-D-alanine carboxypeptidase DacD [Salmonella typhimurium 
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=390

 Score = 100 bits (248),  Expect = 7e-27
 Identities = 82/267 (31%), Positives = 134/267 (50%), Gaps = 17/267 (6%)

Query  89   SPAYVIRDTTNYAAQP-SVNARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSD  147
            SPA +  D  ++A QP +++A A ++MD  TG+VL + N +     ASLTKLMT  V   
Sbjct  19   SPA-LAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPASLTKLMTGYVVDR  77

Query  148  A----RLDMSEEITLEQIDFAGAGGKNSSSTL---RVGDKMNRAEVLLFALMKSENPAAA  200
            A    R+   + +T+ +  +A        S+L   + GD+++  ++    ++ S N A  
Sbjct  78   AIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACV  137

Query  201  ALARTYPGGRPAFVAAMNAKARQLGMTSTHYVESSGLD-PHNVSSARDLGILVSAA--SQ  257
            ALA    GG+P FVA MN+  ++L +  TH+    GLD P   SSA DL +L  A    +
Sbjct  138  ALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGE  197

Query  258  YGLIRQFSTTPSYDFNLGYRVLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVN  317
                  +S     + +L +  +   N N L+ +   +I+  KTG+ + AG  ++      
Sbjct  198  PEFYHMYS-----EKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFNLIASAVDG  252

Query  318  SRPAVVVLLGASSTQARNNDATNLLNW  344
             R  + V++GA S++ R   A  LL W
Sbjct  253  QRRLIAVVMGAKSSKGREEQARKLLQW  279


>P39042 D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. 
(strain K15)]
Length=291

 Score = 94.0 bits (232),  Expect = 3e-25
 Identities = 78/258 (30%), Positives = 127/258 (49%), Gaps = 18/258 (7%)

Query  103  QPSVNARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTA-VVTSDARLDMSEEITLEQI  161
            +P++ A     M+  TG  LY+K  +T     S TK+MTA VV + + L++  ++T+++ 
Sbjct  32   KPTIAAVGGYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVLAQSNLNLDAKVTIQKA  91

Query  162  --DFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPA------F  213
              D+  A  K S + L VGDK+   ++L   ++ S   AA ALA  Y  G  A      F
Sbjct  92   YSDYVVAN-KPSQAHLIVGDKVTVRQLLYGLMLPSGCDAAYALADKYGSGSQAAARVKSF  150

Query  214  VAAMNAKARQLGMTSTHYVESSGL-DPHNVSSARDLGILVSAASQYGLIRQFSTTPSYDF  272
            +  MN  A  LG+ +TH+    G+ +  N S+ R L  + S+A +    R    T +Y  
Sbjct  151  IGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRHLTKIASSAMKNSTFRTVVKTKAYTA  210

Query  273  NL-----GYRVLKS-NNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVVVLL  326
                     R + +  NTN L+ +    I + KTG   EA  C+V   T   +  +  +L
Sbjct  211  KTVTKTGSIRTMDTWKNTNGLLSSYSGAIGV-KTGSGPEAKYCLVFAATRGGKTVIGTVL  269

Query  327  GASSTQARNNDATNLLNW  344
             ++S  AR +DAT ++N+
Sbjct  270  ASTSIPARESDATKIMNY  287


>P33013 D-alanyl-D-alanine carboxypeptidase DacD [Escherichia 
coli (strain K12)]
Length=388

 Score = 92.0 bits (227),  Expect = 5e-24
 Identities = 76/253 (30%), Positives = 120/253 (47%), Gaps = 19/253 (8%)

Query  104  PSVNARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSDARLDMSEEITLEQIDF  163
            P ++A + ++MD  TG++L + N +     ASLTKLMT  V  D  +D S  IT + I  
Sbjct  32   PEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVV-DRAID-SHRITPDDIVT  89

Query  164  AGAGG---------KNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFV  214
             G             +S   L+ GD+++  ++    ++ S N A  ALA    GG+  FV
Sbjct  90   VGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFV  149

Query  215  AAMNAKARQLGMTSTHYVESSGLD-PHNVSSARDLGILVSAA--SQYGLIRQFSTTPSYD  271
              MN  A +L +  TH+    GLD P   SSA DL +L  A    +      +S     +
Sbjct  150  EMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYS-----E  204

Query  272  FNLGYRVLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVVVLLGASST  331
             +L +  +   N N L+ +   N++  KTG+ + AG  ++       R  + V++GA S 
Sbjct  205  KSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSA  264

Query  332  QARNNDATNLLNW  344
            + R  +A  LL W
Sbjct  265  KGREEEARKLLRW  277


>P35150 D-alanyl-D-alanine carboxypeptidase DacB [Bacillus subtilis 
(strain 168)]
Length=382

 Score = 89.7 bits (221),  Expect = 3e-23
 Identities = 67/213 (31%), Positives = 108/213 (51%), Gaps = 18/213 (8%)

Query  106  VNARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSDA-RLDMSEEITLEQIDFA  164
            V+A++A+++D  +G VLY+K+ +    IAS+TK+MTAV+  ++ ++D +  ++   +   
Sbjct  31   VSAKSAIIIDGASGRVLYAKDEHQKRRIASITKIMTAVLAIESGKMDQTVTVSANAVRTE  90

Query  165  GAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVAAMNAKARQL  224
            G     S+  L  G K+   +++   +++S N AA A+A    G    FV  MN KA QL
Sbjct  91   G-----SAIYLTEGQKVKLKDLVYGLMLRSGNDAAVAIAEHVGGSLDGFVYMMNQKAEQL  145

Query  225  GMTSTHYVESSGLDPH--NVSSARDLGILVSAASQYGLIRQFSTTPSYDFNLGYRVLKSN  282
            GM +T +    GLD H  + S+A D+ IL   A +    ++ S T  Y       V K+ 
Sbjct  146  GMKNTRFQNPHGLDDHENHYSTAYDMAILTKYAMKLKDYQKISGTKIYKAETMESVWKNK  205

Query  283  NTNALV----RNGGWNINLSKTGYINEAGRCVV  311
            N    +      GG      KTGY   A R +V
Sbjct  206  NKLLTMLYPYSTGG------KTGYTKLAKRTLV  232


>P0AEB3 D-alanyl-D-alanine carboxypeptidase DacA [Escherichia 
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=403

 Score = 85.1 bits (209),  Expect = 1e-21
 Identities = 64/249 (26%), Positives = 122/249 (49%), Gaps = 11/249 (4%)

Query  104  PSVNARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSDA----RLDMSEEITLE  159
            P ++A + +++D  +G+VL  +N +     ASLTK+MT+ V   A    +   ++ +T+ 
Sbjct  42   PQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIG  101

Query  160  QIDFAGAGGKNSSSTL---RVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVAA  216
               +A        S+L   + G ++  ++++    ++S N A  A+A    G + AFV  
Sbjct  102  NDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGL  161

Query  217  MNAKARQLGMTSTHYVESSGLDPH-NVSSARDLGILVSAASQYGLIRQFSTTPSYDFNLG  275
            MN+    LG+ +TH+    GLD     SSARD+  L+  A    +  ++S     +F   
Sbjct  162  MNSYVNALGLKNTHFQTVHGLDADGQYSSARDMA-LIGQALIRDVPNEYSIYKEKEFT--  218

Query  276  YRVLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVVVLLGASSTQARN  335
            +  ++  N N L+ +   N++  KTG+ ++AG  +V   T      +  ++G  + + R 
Sbjct  219  FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGRE  278

Query  336  NDATNLLNW  344
             ++  LL W
Sbjct  279  AESKKLLTW  287


>P0AEB4 D-alanyl-D-alanine carboxypeptidase DacA [Escherichia 
coli O157:H7]
Length=403

 Score = 85.1 bits (209),  Expect = 1e-21
 Identities = 64/249 (26%), Positives = 122/249 (49%), Gaps = 11/249 (4%)

Query  104  PSVNARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSDA----RLDMSEEITLE  159
            P ++A + +++D  +G+VL  +N +     ASLTK+MT+ V   A    +   ++ +T+ 
Sbjct  42   PQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIG  101

Query  160  QIDFAGAGGKNSSSTL---RVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVAA  216
               +A        S+L   + G ++  ++++    ++S N A  A+A    G + AFV  
Sbjct  102  NDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGL  161

Query  217  MNAKARQLGMTSTHYVESSGLDPH-NVSSARDLGILVSAASQYGLIRQFSTTPSYDFNLG  275
            MN+    LG+ +TH+    GLD     SSARD+  L+  A    +  ++S     +F   
Sbjct  162  MNSYVNALGLKNTHFQTVHGLDADGQYSSARDMA-LIGQALIRDVPNEYSIYKEKEFT--  218

Query  276  YRVLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVVVLLGASSTQARN  335
            +  ++  N N L+ +   N++  KTG+ ++AG  +V   T      +  ++G  + + R 
Sbjct  219  FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGRE  278

Query  336  NDATNLLNW  344
             ++  LL W
Sbjct  279  AESKKLLTW  287


>P0AEB2 D-alanyl-D-alanine carboxypeptidase DacA [Escherichia 
coli (strain K12)]
Length=403

 Score = 85.1 bits (209),  Expect = 1e-21
 Identities = 64/249 (26%), Positives = 122/249 (49%), Gaps = 11/249 (4%)

Query  104  PSVNARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSDA----RLDMSEEITLE  159
            P ++A + +++D  +G+VL  +N +     ASLTK+MT+ V   A    +   ++ +T+ 
Sbjct  42   PQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIG  101

Query  160  QIDFAGAGGKNSSSTL---RVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVAA  216
               +A        S+L   + G ++  ++++    ++S N A  A+A    G + AFV  
Sbjct  102  NDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGL  161

Query  217  MNAKARQLGMTSTHYVESSGLDPH-NVSSARDLGILVSAASQYGLIRQFSTTPSYDFNLG  275
            MN+    LG+ +TH+    GLD     SSARD+  L+  A    +  ++S     +F   
Sbjct  162  MNSYVNALGLKNTHFQTVHGLDADGQYSSARDMA-LIGQALIRDVPNEYSIYKEKEFT--  218

Query  276  YRVLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVVVLLGASSTQARN  335
            +  ++  N N L+ +   N++  KTG+ ++AG  +V   T      +  ++G  + + R 
Sbjct  219  FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGRE  278

Query  336  NDATNLLNW  344
             ++  LL W
Sbjct  279  AESKKLLTW  287


>P08750 D-alanyl-D-alanine carboxypeptidase DacA [Bacillus subtilis 
(strain 168)]
Length=443

 Score = 81.6 bits (200),  Expect = 2e-20
 Identities = 80/293 (27%), Positives = 126/293 (43%), Gaps = 57/293 (19%)

Query  72   VTTTVRNAAPPSSASSSSPAYVIRDTTNYAAQPSVNARAALVMDAQTGEVLYSKNTNTSM  131
            +T  V   AP S A ++S                +NA AA++++A +G++LYSKN +  +
Sbjct  16   LTLAVTCLAPMSKAKAASDPI------------DINASAAIMIEASSGKILYSKNADKRL  63

Query  132  PIASLTKLMTAVVTSDARLDMSE---EITLEQIDFAGAGGKNSSST---LRVGDKMNRAE  185
            PIAS+TK+MT  +  +A +D  +   + T    D+     +++S +   LR   K    E
Sbjct  64   PIASMTKMMTEYLLLEA-IDQGKVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKE  122

Query  186  VLLFALMKSENPAAAALARTYPGGRPAFVAAMNAKARQLGMTSTHYVESSGLD-------  238
            +     + S N AA A+A    G    FV  MNAKA++LG+T   +V ++GL+       
Sbjct  123  LYQATAIYSANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGH  182

Query  239  -PHNVS-------SARDLGILVS-AASQYGLIRQFSTTPSYDFNLGYRVLKSNNTNALVR  289
             P   S       SA+D+ +L     + Y  I + S+     F  G        T+  + 
Sbjct  183  QPEGTSVNEESEVSAKDMAVLADHLITDYPEILETSSIAKTKFREG--------TDDEMD  234

Query  290  NGGWNINLS--------------KTGYINEAGRCVVMHTTVNSRPAVVVLLGA  328
               WN  L               KTG  + AG C       N    + V+L A
Sbjct  235  MPNWNFMLKGLVSEYKKATVDGLKTGSTDSAGSCFTGTAERNGMRVITVVLNA  287


 Score = 17.3 bits (33),  Expect = 9.9
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query  6   KSLKHVLSMSILLGLSST-----SFAELIVNPSSGNAAGSASLTWSSDDANQLLNSDRTI  60
           K  K +L   ++L L+ T     S A+   +P   NA+ +  +  SS       N+D+ +
Sbjct  4   KKCKQLLMSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRL  63


>Q05523 D-alanyl-D-alanine carboxypeptidase DacA [Geobacillus 
stearothermophilus]
Length=452

 Score = 78.6 bits (192),  Expect = 2e-19
 Identities = 74/275 (27%), Positives = 123/275 (45%), Gaps = 31/275 (11%)

Query  101  AAQPSVNARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSDA----RLDMSEEI  156
            +A   + A AA+++DAQTG +LY KN +T + IAS+TK+MT  +  DA    R+   +  
Sbjct  32   SAPLDIRADAAILVDAQTGRILYEKNIDTVLGIASMTKMMTEYLLLDAIKAKRVKWDQMY  91

Query  157  TLEQIDFAGAGGKNSSST-LRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVA  215
            T     +  +  +  S+  LR   K    E+     + S N A  A+A    G    FV 
Sbjct  92   TPSDYVYRLSQDRALSNVPLRKDGKYTVRELYEAMAIYSANGATVAIAEIIAGSEKNFVK  151

Query  216  AMNAKARQLGMTSTHYVESSGL---------------DPHNVSSARDLGILV-SAASQYG  259
             MN KA++LG+    +V ++GL               +  NV SAR + +L       + 
Sbjct  152  MMNDKAKELGLKDYKFVNATGLSNKDLKGFHPEGTSTNEENVMSARAMAMLAYRLLKDHP  211

Query  260  LIRQFSTTPSYDFNLGYR-VLKSNNTNALVRN---GGWNINLSKTGYINEAGRCVVMHTT  315
             + + ++ P   F  G +  +K +N N ++     G   ++  KTGY   AG C      
Sbjct  212  EVLKTASIPHKVFREGTKDEIKMDNWNWMLPGLVYGYEGVDGLKTGYTEFAGNCFTGTAK  271

Query  316  VNSRPAVVVLL------GASSTQARNNDATNLLNW  344
             N    + V++      G ++ +AR  +   L N+
Sbjct  272  RNGVRLISVVMNAKDASGKTTKEARFKETEKLFNY  306



Lambda      K        H        a         alpha
   0.313    0.124    0.341    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1478030


  Database: 87b117285105d7729765052702f91b96.SwissProt.fasta
    Posted date:  May 20, 2024  6:13 AM
  Number of letters in database: 5,566
  Number of sequences in database:  15



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40