BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 6f9800519821a57f4374fe7136317114.SwissProt.fasta
           20 sequences; 11,162 total letters



Query= ACIAD0284

Length=384
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q8EQQ2 Sensor protein LytS [Oceanobacillus iheyensis (strain DSM ...  102     1e-26
Q4L8V3 Sensor protein LytS [Staphylococcus haemolyticus (strain J...  100     5e-26
Q4A009 Sensor protein LytS [Staphylococcus saprophyticus subsp. s...  99.8    9e-26
Q5HLG3 Sensor protein LytS [Staphylococcus epidermidis (strain AT...  98.2    3e-25
Q8CR79 Sensor protein LytS [Staphylococcus epidermidis (strain AT...  97.4    5e-25
P0AA94 Sensor histidine kinase YpdA [Escherichia coli O157:H7]        95.9    2e-24
P0AA93 Sensor histidine kinase YpdA [Escherichia coli (strain K12)]   95.9    2e-24
Q6GK52 Sensor histidine kinase/phosphatase LytS [Staphylococcus a...  91.3    6e-23
P0AD16 Sensor histidine kinase BtsS [Shigella flexneri]               90.9    7e-23
P0AD15 Sensor histidine kinase BtsS [Escherichia coli O6:H1 (stra...  90.9    7e-23
P0AD14 Sensor histidine kinase BtsS [Escherichia coli (strain K12)]   90.9    7e-23
Q5HJB6 Sensor histidine kinase/phosphatase LytS [Staphylococcus a...  90.9    8e-23
Q2YV68 Sensor histidine kinase/phosphatase LytS [Staphylococcus a...  90.9    8e-23
Q2FK10 Sensor histidine kinase/phosphatase LytS [Staphylococcus a...  90.9    8e-23
P60612 Sensor histidine kinase/phosphatase LytS [Staphylococcus a...  90.9    8e-23
Q53705 Sensor histidine kinase/phosphatase LytS [Staphylococcus a...  90.9    8e-23
Q82Z75 Sensor protein LytS [Enterococcus faecalis (strain ATCC 70...  89.7    2e-22
P94586 Putative uncharacterized protein YwpD [Bacillus subtilis (...  73.2    1e-17
Q5HJF6 Sensor protein kinase HptS [Staphylococcus aureus (strain ...  74.3    2e-17
Q2G1E0 Sensor protein kinase HptS [Staphylococcus aureus (strain ...  74.3    2e-17


>Q8EQQ2 Sensor protein LytS [Oceanobacillus iheyensis (strain 
DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)]
Length=585

 Score = 102 bits (253),  Expect = 1e-26
 Identities = 66/191 (35%), Positives = 105/191 (55%), Gaps = 18/191 (9%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQ--ELKLVSLA  247
            EA+++ +QA+I+PHFLFN+ + + SL+ +D +KA  +L+ LS+  RA+ +     LV L 
Sbjct  376  EAKMRNLQAQINPHFLFNTFHLIHSLLRVDAEKARHILVQLSQFMRANLKIASESLVPLH  435

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E+E  Q YL I   R  ++++      H D  L    IP  TLQPL+ENSI HG+  S+
Sbjct  436  KELEHLQAYLEIVQARFPDQISTS---IHVDDYLLDIEIPPATLQPLVENSIQHGLSLST  492

Query  308  QPSNISILVEILQNQVSIVITNPYSPDKIKL-------------REGHGIAVENVKKRLI  354
                ++I +    N VSIV+ +     + KL              +G+GIA+ N+ +RLI
Sbjct  493  SKGILTINITKTDNNVSIVLLDNGQGFEEKLLPILGKKPLHQNENKGNGIALYNINQRLI  552

Query  355  AYYGSSVKFQI  365
            +  G   +  I
Sbjct  553  SLLGEDSQLHI  563


>Q4L8V3 Sensor protein LytS [Staphylococcus haemolyticus (strain 
JCSC1435)]
Length=584

 Score = 100 bits (249),  Expect = 5e-26
 Identities = 59/206 (29%), Positives = 110/206 (53%), Gaps = 16/206 (8%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQELK--LVSLA  247
            +A I+++QA+++PHF FNS+N++ +L+ ID +KA  +L+ LS+ FR++ Q  +   ++L 
Sbjct  377  DAEIKSLQAQVNPHFFFNSINTISALVRIDSEKARKLLLQLSQFFRSNLQGARNNTITLG  436

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E++  + YLA+E  R  +R  +++   H D   K   IP   +Q L+EN+I H  +   
Sbjct  437  KELQQVEAYLALEQARFPDRFTIQY---HIDSSCKHVLIPPFVIQILVENAIKHAFKHRR  493

Query  308  QPSNISILVEILQNQVSIVITNPYS---PDKIKL--------REGHGIAVENVKKRLIAY  356
            + + I ++      ++++ + +  S    DK+ L          G G A+EN+ +RLI  
Sbjct  494  KDNIIDVVAHHDNEELTLTVRDNGSGIDDDKLPLIGQMSVDSETGTGSALENLNRRLIGL  553

Query  357  YGSSVKFQIYCARELYTIVVNYPYQT  382
            YG+             T+  + P  T
Sbjct  554  YGTKAALHFESTEIGTTVSCHIPSHT  579


>Q4A009 Sensor protein LytS [Staphylococcus saprophyticus subsp. 
saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 
/ NCTC 7292 / S-41)]
Length=591

 Score = 99.8 bits (247),  Expect = 9e-26
 Identities = 65/206 (32%), Positives = 113/206 (55%), Gaps = 20/206 (10%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQELK--LVSLA  247
            +A I+++QA+++PHF FN++N++ +LI ID +KA  +L+ LS+ FR++ Q  +   +SL 
Sbjct  377  DAEIKSLQAQVNPHFFFNAINTISALIRIDSEKARELLLQLSQFFRSNLQGARNNTISLE  436

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E++  + YL++E  R  +R NV + I   D+    A +P   +Q L+EN+I H  +  +
Sbjct  437  KELQQVESYLSLEQARYPDRFNVSFDI---DRTCYGALVPPFAIQILVENAIKHAFK--N  491

Query  308  QPSNISILVEILQNQVSIVIT-------NPYSP-DKI-----KLREGHGIAVENVKKRLI  354
            +  N  I+V+  + Q  +VI+        PY   DKI         G G A+EN+ +RL 
Sbjct  492  RKYNNEIIVKAHKAQTGLVISVSDNGHGIPYEKLDKIGKTSVHSESGTGSALENLNRRLD  551

Query  355  AYYGSSVKFQIYCARELYTIVVNYPY  380
              +G     QI+   +   +    PY
Sbjct  552  GLFGYEASLQIHSDHQGTQVSCTIPY  577


>Q5HLG3 Sensor protein LytS [Staphylococcus epidermidis (strain 
ATCC 35984 / RP62A)]
Length=591

 Score = 98.2 bits (243),  Expect = 3e-25
 Identities = 58/206 (28%), Positives = 111/206 (54%), Gaps = 16/206 (8%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQELK--LVSLA  247
            +A I+++QA+++PHF FN++N++ +L+ ID +KA  +LI LS+ FR++    +   ++L 
Sbjct  377  DAEIKSLQAQVNPHFFFNAINTISALVRIDSEKARRLLIQLSQFFRSNLNGARNNTITLQ  436

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E++    YL++E  R   R N+ ++I   D   + A IP   +Q L+ENSI H  +   
Sbjct  437  KELQQVAAYLSLEQARYPNRFNIHYRI---DDQCQDALIPPFIIQILVENSIKHAFKNRK  493

Query  308  QPSNISILVEILQNQVSIVI-----------TNPYSPDKIKLREGHGIAVENVKKRLIAY  356
            + ++I + V + Q+ +SI +            +      +    G G A+ N+ KRL   
Sbjct  494  KNNHIDVDVSMKQDYLSISVQDNGQGIPADQLDTIGYTTVTSTTGTGNALVNLNKRLTGL  553

Query  357  YGSSVKFQIYCARELYTIVVNYPYQT  382
            +G++    I  ++   T+    PY++
Sbjct  554  FGTTSALNIQSSQSGTTVSCLIPYKS  579


>Q8CR79 Sensor protein LytS [Staphylococcus epidermidis (strain 
ATCC 12228 / FDA PCI 1200)]
Length=591

 Score = 97.4 bits (241),  Expect = 5e-25
 Identities = 58/206 (28%), Positives = 111/206 (54%), Gaps = 16/206 (8%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQELK--LVSLA  247
            +A I+++QA+++PHF FN++N++ +L+ ID +KA  +LI LS+ FR++    +   ++L 
Sbjct  377  DAEIKSLQAQVNPHFFFNAINTISALVRIDSEKARRLLIQLSQFFRSNLNGARNNTITLQ  436

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E++    YL++E  R   R N+ ++I   D   + A IP   +Q L+ENSI H  +   
Sbjct  437  KELQQVAAYLSLEQARYPNRFNIHYRI---DDQCQDALIPPFIIQILVENSIKHAFKNRK  493

Query  308  QPSNISILVEILQNQVSIVI-----------TNPYSPDKIKLREGHGIAVENVKKRLIAY  356
            + ++I + V + Q+ +SI +            +      +    G G A+ N+ KRL   
Sbjct  494  KNNHIDVDVSMKQDCLSISVQDNGQGIPADQLDTIGYTTVTSTTGTGNALVNLNKRLTGL  553

Query  357  YGSSVKFQIYCARELYTIVVNYPYQT  382
            +G++    I  ++   T+    PY++
Sbjct  554  FGTTSALNIQSSQSGTTVSCLIPYKS  579


>P0AA94 Sensor histidine kinase YpdA [Escherichia coli O157:H7]
Length=565

 Score = 95.9 bits (237),  Expect = 2e-24
 Identities = 57/182 (31%), Positives = 103/182 (57%), Gaps = 14/182 (8%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQ--ELKLVSLA  247
            +A ++A+Q++I+PHFLFN+LN++ S I ++PD A  ++ NLSR  R + +  + + + + 
Sbjct  358  KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK  417

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E+   + Y+AIE  R G++L V + I+          IP L +QPL+EN+I HG++   
Sbjct  418  KELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC----IPSLLIQPLVENAIVHGIQPCK  473

Query  308  QPSNISILVEILQNQVSIVI------TNPYSPDKIKLRE--GHGIAVENVKKRLIAYYGS  359
                ++I V    N+V I +       +P   ++++  E  G+ I + NV  R+   YG 
Sbjct  474  GKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE  533

Query  360  SV  361
             +
Sbjct  534  GL  535


>P0AA93 Sensor histidine kinase YpdA [Escherichia coli (strain 
K12)]
Length=565

 Score = 95.9 bits (237),  Expect = 2e-24
 Identities = 57/182 (31%), Positives = 103/182 (57%), Gaps = 14/182 (8%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQ--ELKLVSLA  247
            +A ++A+Q++I+PHFLFN+LN++ S I ++PD A  ++ NLSR  R + +  + + + + 
Sbjct  358  KAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIK  417

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E+   + Y+AIE  R G++L V + I+          IP L +QPL+EN+I HG++   
Sbjct  418  KELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCC----IPSLLIQPLVENAIVHGIQPCK  473

Query  308  QPSNISILVEILQNQVSIVI------TNPYSPDKIKLRE--GHGIAVENVKKRLIAYYGS  359
                ++I V    N+V I +       +P   ++++  E  G+ I + NV  R+   YG 
Sbjct  474  GKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGE  533

Query  360  SV  361
             +
Sbjct  534  GL  535


>Q6GK52 Sensor histidine kinase/phosphatase LytS [Staphylococcus 
aureus (strain MRSA252)]
Length=584

 Score = 91.3 bits (225),  Expect = 6e-23
 Identities = 63/206 (31%), Positives = 106/206 (51%), Gaps = 17/206 (8%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQELK--LVSLA  247
            +A I+++QA++ PHF FNS+N++ +L+ I+ +KA  +L+ LS  FRA+ Q  K   ++L 
Sbjct  377  DAEIKSLQAQVSPHFFFNSINTISALVRINSEKARELLLELSYFFRANLQGSKQHTITLD  436

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E+   + YL++E  R   R N+   IN  D+   V  +P   +Q L+EN+I H      
Sbjct  437  KELSQVRAYLSLEQARYPGRFNI--NINVEDKYRNVL-VPPFLIQILVENAIKHAFTNRK  493

Query  308  QPSNISI-LVEILQNQVSIVITN---PYSPDKIKL--------REGHGIAVENVKKRLIA  355
            Q ++I + +++     V I++ +     S DK+ L          G G A+EN+  RL  
Sbjct  494  QGNDIDVSVIKETATHVRIIVQDNGQGISKDKMHLLGETSVESESGTGSALENLNLRLKG  553

Query  356  YYGSSVKFQIYCARELYTIVVNYPYQ  381
             +G S   Q        T     PY+
Sbjct  554  LFGKSAALQFESTSSGTTFWCVLPYE  579


>P0AD16 Sensor histidine kinase BtsS [Shigella flexneri]
Length=561

 Score = 90.9 bits (224),  Expect = 7e-23
 Identities = 62/207 (30%), Positives = 104/207 (50%), Gaps = 12/207 (6%)

Query  180  QWVRQQHSELEARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQ  239
            Q+ RQ+    ++ I+ + A+++PHFLFN+LN++ ++I  D ++A  ++  LS  FR + +
Sbjct  359  QYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLK  418

Query  240  E-LKLVSLAEEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENS  298
               + V+LA+EIE    YL IE  R   RL V   I    Q L   ++P  TLQP++EN+
Sbjct  419  RPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAI---PQELSQQQLPAFTLQPIVENA  475

Query  299  IFHGVETSSQPSNISILVEILQNQVSIVITNP---YSPDKIKLREGHGIAVENVKKRLIA  355
            I HG         ++I        + + I +    Y P    +    G+ +  V KRL  
Sbjct  476  IKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQP----VTNASGLGMNLVDKRLRE  531

Query  356  YYGSSVKFQIYCARELYT-IVVNYPYQ  381
             +G      + C  + YT I +  P++
Sbjct  532  RFGDDYGISVACEPDSYTRITLRLPWR  558


>P0AD15 Sensor histidine kinase BtsS [Escherichia coli O6:H1 (strain 
CFT073 / ATCC 700928 / UPEC)]
Length=561

 Score = 90.9 bits (224),  Expect = 7e-23
 Identities = 62/207 (30%), Positives = 104/207 (50%), Gaps = 12/207 (6%)

Query  180  QWVRQQHSELEARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQ  239
            Q+ RQ+    ++ I+ + A+++PHFLFN+LN++ ++I  D ++A  ++  LS  FR + +
Sbjct  359  QYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLK  418

Query  240  E-LKLVSLAEEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENS  298
               + V+LA+EIE    YL IE  R   RL V   I    Q L   ++P  TLQP++EN+
Sbjct  419  RPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAI---PQELSQQQLPAFTLQPIVENA  475

Query  299  IFHGVETSSQPSNISILVEILQNQVSIVITNP---YSPDKIKLREGHGIAVENVKKRLIA  355
            I HG         ++I        + + I +    Y P    +    G+ +  V KRL  
Sbjct  476  IKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQP----VTNASGLGMNLVDKRLRE  531

Query  356  YYGSSVKFQIYCARELYT-IVVNYPYQ  381
             +G      + C  + YT I +  P++
Sbjct  532  RFGDDYGISVACEPDSYTRITLRLPWR  558


>P0AD14 Sensor histidine kinase BtsS [Escherichia coli (strain 
K12)]
Length=561

 Score = 90.9 bits (224),  Expect = 7e-23
 Identities = 62/207 (30%), Positives = 104/207 (50%), Gaps = 12/207 (6%)

Query  180  QWVRQQHSELEARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQ  239
            Q+ RQ+    ++ I+ + A+++PHFLFN+LN++ ++I  D ++A  ++  LS  FR + +
Sbjct  359  QYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLK  418

Query  240  E-LKLVSLAEEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENS  298
               + V+LA+EIE    YL IE  R   RL V   I    Q L   ++P  TLQP++EN+
Sbjct  419  RPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAI---PQELSQQQLPAFTLQPIVENA  475

Query  299  IFHGVETSSQPSNISILVEILQNQVSIVITNP---YSPDKIKLREGHGIAVENVKKRLIA  355
            I HG         ++I        + + I +    Y P    +    G+ +  V KRL  
Sbjct  476  IKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQP----VTNASGLGMNLVDKRLRE  531

Query  356  YYGSSVKFQIYCARELYT-IVVNYPYQ  381
             +G      + C  + YT I +  P++
Sbjct  532  RFGDDYGISVACEPDSYTRITLRLPWR  558


>Q5HJB6 Sensor histidine kinase/phosphatase LytS [Staphylococcus 
aureus (strain COL)]
Length=584

 Score = 90.9 bits (224),  Expect = 8e-23
 Identities = 63/206 (31%), Positives = 106/206 (51%), Gaps = 17/206 (8%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQELK--LVSLA  247
            +A I+++QA++ PHF FNS+N++ +L+ I+ +KA  +L+ LS  FRA+ Q  K   ++L 
Sbjct  377  DAEIKSLQAQVSPHFFFNSINTISALVRINSEKARELLLELSYFFRANLQGSKQHTITLD  436

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E+   + YL++E  R   R N+   IN  D+   V  +P   +Q L+EN+I H      
Sbjct  437  KELSQVRAYLSLEQARYPGRFNI--NINVEDKYRDVL-VPPFLIQILVENAIKHAFTNRK  493

Query  308  QPSNISI-LVEILQNQVSIVITN---PYSPDKIKL--------REGHGIAVENVKKRLIA  355
            Q ++I + +++     V I++ +     S DK+ L          G G A+EN+  RL  
Sbjct  494  QGNDIDVSVIKETATHVRIIVQDNGQGISKDKMHLLGETSVESESGTGSALENLNLRLKG  553

Query  356  YYGSSVKFQIYCARELYTIVVNYPYQ  381
             +G S   Q        T     PY+
Sbjct  554  LFGKSAALQFESTSSGTTFWCVLPYE  579


>Q2YV68 Sensor histidine kinase/phosphatase LytS [Staphylococcus 
aureus (strain bovine RF122 / ET3-1)]
Length=584

 Score = 90.9 bits (224),  Expect = 8e-23
 Identities = 63/206 (31%), Positives = 106/206 (51%), Gaps = 17/206 (8%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQELK--LVSLA  247
            +A I+++QA++ PHF FNS+N++ +L+ I+ +KA  +L+ LS  FRA+ Q  K   ++L 
Sbjct  377  DAEIKSLQAQVSPHFFFNSINTISALVRINSEKARELLLELSYFFRANLQGSKQHTITLD  436

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E+   + YL++E  R   R N+   IN  D+   V  +P   +Q L+EN+I H      
Sbjct  437  KELSQVRAYLSLEQARYPGRFNI--NINVEDKYRDVL-VPPFLIQILVENAIKHAFTNRK  493

Query  308  QPSNISI-LVEILQNQVSIVITN---PYSPDKIKL--------REGHGIAVENVKKRLIA  355
            Q ++I + +++     V I++ +     S DK+ L          G G A+EN+  RL  
Sbjct  494  QGNDIDVSVIKETATHVRIIVQDNGQGISKDKMHLLGETSVESESGTGSALENLNLRLKG  553

Query  356  YYGSSVKFQIYCARELYTIVVNYPYQ  381
             +G S   Q        T     PY+
Sbjct  554  LFGKSAALQFESTSSGTTFWCVLPYE  579


>Q2FK10 Sensor histidine kinase/phosphatase LytS [Staphylococcus 
aureus (strain USA300)]
Length=584

 Score = 90.9 bits (224),  Expect = 8e-23
 Identities = 63/206 (31%), Positives = 106/206 (51%), Gaps = 17/206 (8%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQELK--LVSLA  247
            +A I+++QA++ PHF FNS+N++ +L+ I+ +KA  +L+ LS  FRA+ Q  K   ++L 
Sbjct  377  DAEIKSLQAQVSPHFFFNSINTISALVRINSEKARELLLELSYFFRANLQGSKQHTITLD  436

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E+   + YL++E  R   R N+   IN  D+   V  +P   +Q L+EN+I H      
Sbjct  437  KELSQVRAYLSLEQARYPGRFNI--NINVEDKYRDVL-VPPFLIQILVENAIKHAFTNRK  493

Query  308  QPSNISI-LVEILQNQVSIVITN---PYSPDKIKL--------REGHGIAVENVKKRLIA  355
            Q ++I + +++     V I++ +     S DK+ L          G G A+EN+  RL  
Sbjct  494  QGNDIDVSVIKETATHVRIIVQDNGQGISKDKMHLLGETSVESESGTGSALENLNLRLKG  553

Query  356  YYGSSVKFQIYCARELYTIVVNYPYQ  381
             +G S   Q        T     PY+
Sbjct  554  LFGKSAALQFESTSSGTTFWCVLPYE  579


>P60612 Sensor histidine kinase/phosphatase LytS [Staphylococcus 
aureus (strain Mu50 / ATCC 700699)]
Length=584

 Score = 90.9 bits (224),  Expect = 8e-23
 Identities = 63/206 (31%), Positives = 106/206 (51%), Gaps = 17/206 (8%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQELK--LVSLA  247
            +A I+++QA++ PHF FNS+N++ +L+ I+ +KA  +L+ LS  FRA+ Q  K   ++L 
Sbjct  377  DAEIKSLQAQVSPHFFFNSINTISALVRINSEKARELLLELSYFFRANLQGSKQHTITLD  436

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E+   + YL++E  R   R N+   IN  D+   V  +P   +Q L+EN+I H      
Sbjct  437  KELSQVRAYLSLEQARYPGRFNI--NINVEDKYRDVL-VPPFLIQILVENAIKHAFTNRK  493

Query  308  QPSNISI-LVEILQNQVSIVITN---PYSPDKIKL--------REGHGIAVENVKKRLIA  355
            Q ++I + +++     V I++ +     S DK+ L          G G A+EN+  RL  
Sbjct  494  QGNDIDVSVIKETATHVRIIVQDNGQGISKDKMHLLGETSVESESGTGSALENLNLRLKG  553

Query  356  YYGSSVKFQIYCARELYTIVVNYPYQ  381
             +G S   Q        T     PY+
Sbjct  554  LFGKSAALQFESTSSGTTFWCVLPYE  579


>Q53705 Sensor histidine kinase/phosphatase LytS [Staphylococcus 
aureus (strain NCTC 8325 / PS 47)]
Length=584

 Score = 90.9 bits (224),  Expect = 8e-23
 Identities = 63/206 (31%), Positives = 106/206 (51%), Gaps = 17/206 (8%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQELK--LVSLA  247
            +A I+++QA++ PHF FNS+N++ +L+ I+ +KA  +L+ LS  FRA+ Q  K   ++L 
Sbjct  377  DAEIKSLQAQVSPHFFFNSINTISALVRINSEKARELLLELSYFFRANLQGSKQHTITLD  436

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E+   + YL++E  R   R N+   IN  D+   V  +P   +Q L+EN+I H      
Sbjct  437  KELSQVRAYLSLEQARYPGRFNI--NINVEDKYRDVL-VPPFLIQILVENAIKHAFTNRK  493

Query  308  QPSNISI-LVEILQNQVSIVITN---PYSPDKIKL--------REGHGIAVENVKKRLIA  355
            Q ++I + +++     V I++ +     S DK+ L          G G A+EN+  RL  
Sbjct  494  QGNDIDVSVIKETATHVRIIVQDNGQGISKDKMHLLGETSVESESGTGSALENLNLRLKG  553

Query  356  YYGSSVKFQIYCARELYTIVVNYPYQ  381
             +G S   Q        T     PY+
Sbjct  554  LFGKSAALQFESTSSGTTFWCVLPYE  579


>Q82Z75 Sensor protein LytS [Enterococcus faecalis (strain ATCC 
700802 / V583)]
Length=589

 Score = 89.7 bits (221),  Expect = 2e-22
 Identities = 52/189 (28%), Positives = 105/189 (56%), Gaps = 16/189 (8%)

Query  190  EARIQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQEL--KLVSLA  247
            EA I+++QA+++PHF FN++N++ +L+  D +KA  +L+ LS+ FR + Q      + ++
Sbjct  377  EAEIKSLQAQVNPHFFFNAINTISALMRKDSEKARKLLLQLSKYFRGNLQGAVQTTIPVS  436

Query  248  EEIELCQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVETSS  307
            +E+E  + YL++E  R   R  V + +   ++ +   ++P   +Q L+EN+I H   +  
Sbjct  437  QELEQVKAYLSLEQARFPNRYQVTFDV---EEAVASEKVPPYAIQVLVENTIKHAFGSRK  493

Query  308  QPSNISILVEILQNQ--VSIVITNPYSPDKIKL---------REGHGIAVENVKKRLIAY  356
            + + + ++V+  Q++  V +       P++ +L          +G G A+EN+ +R+   
Sbjct  494  ENNQVRVVVKAKQHKLHVDVYDNGQGIPEERRLLLGKTTVTSEKGTGTALENLSRRMANL  553

Query  357  YGSSVKFQI  365
            YGS   F I
Sbjct  554  YGSEGCFLI  562


>P94586 Putative uncharacterized protein YwpD [Bacillus subtilis 
(strain 168)]
Length=278

 Score = 73.2 bits (178),  Expect = 1e-17
 Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 19/179 (11%)

Query  196  MQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASF---QELKLVSLAEEIEL  252
            +Q++I PHFL+N LN+++SL  +D +KA  +    +   R SF       + S   E+ +
Sbjct  72   LQSQIKPHFLYNVLNTIISLTHLDIEKAREVTEEFTNYLRMSFDFQNTSAISSFRHELSI  131

Query  253  CQHYLAIESIRLGERLNVEWKINHSDQMLKVARIPLLTLQPLIENSIFHGVE--------  304
               YL+IE  R   RL V + I+     +    +P L +QPL+EN++ HGV         
Sbjct  132  INSYLSIEKTRFSNRLEVLFDIDEDIDFI----LPPLMIQPLVENAVLHGVSKKRGGGWI  187

Query  305  --TSSQPSNISILVEILQNQVSIVITNPYSPDKIKLREGHGIAVENVKKRLIAYYGSSV  361
              T+ + S     +++  N     IT     D +       + ++N+ +RL  + GS +
Sbjct  188  KLTAKKQSKNEYHIKVEDNGPG--ITPEKQIDLLSTDFDRSVGLKNINQRLKHFCGSEL  244


>Q5HJF6 Sensor protein kinase HptS [Staphylococcus aureus (strain 
COL)]
Length=518

 Score = 74.3 bits (181),  Expect = 2e-17
 Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 23/208 (11%)

Query  185  QHSELEAR---IQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQ-E  240
            +H+E   R   ++ ++ +  PHFLFN++ ++  LI++ P  A+T++  LS++ R S +  
Sbjct  304  EHTERRLRDIQLKEIERQFQPHFLFNTMQTIQYLITLSPKLAQTVVQQLSQMLRYSLRTN  363

Query  241  LKLVSLAEEIELCQHYLAIESIRLGE--RLNVEWKINHSDQMLKVARIPLLTLQPLIENS  298
               V L EE+   + Y+AI++IR  +  +L++E     S +  +   I  + LQPLIEN+
Sbjct  364  SHTVELNEELNYIEQYVAIQNIRFDDMIKLHIE-----SSEEARHQTIGKMMLQPLIENA  418

Query  299  IFHGVETSSQPSNISILVEILQNQVSIVITNPYSPDKIKLR-----------EGHGIAVE  347
            I HG +T S    I + +   QN   +V  N       +L+           +   + + 
Sbjct  419  IKHGRDTESLDITIRLTL-ARQNLHVLVCDNGIGMSSSRLQYVRQSLNNDVFDTKHLGLN  477

Query  348  NVKKRLIAYYGSSVKFQIYCARELYTIV  375
            ++  + +  YGS  +  I+  R   T++
Sbjct  478  HLHNKAMIQYGSHARLHIFSKRNQGTLI  505


>Q2G1E0 Sensor protein kinase HptS [Staphylococcus aureus (strain 
NCTC 8325 / PS 47)]
Length=518

 Score = 74.3 bits (181),  Expect = 2e-17
 Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 23/208 (11%)

Query  185  QHSELEAR---IQAMQARIHPHFLFNSLNSVVSLISIDPDKAETMLINLSRLFRASFQ-E  240
            +H+E   R   ++ ++ +  PHFLFN++ ++  LI++ P  A+T++  LS++ R S +  
Sbjct  304  EHTERRLRDIQLKEIERQFQPHFLFNTMQTIQYLITLSPKLAQTVVQQLSQMLRYSLRTN  363

Query  241  LKLVSLAEEIELCQHYLAIESIRLGE--RLNVEWKINHSDQMLKVARIPLLTLQPLIENS  298
               V L EE+   + Y+AI++IR  +  +L++E     S +  +   I  + LQPLIEN+
Sbjct  364  SHTVELNEELNYIEQYVAIQNIRFDDMIKLHIE-----SSEEARHQTIGKMMLQPLIENA  418

Query  299  IFHGVETSSQPSNISILVEILQNQVSIVITNPYSPDKIKLR-----------EGHGIAVE  347
            I HG +T S    I + +   QN   +V  N       +L+           +   + + 
Sbjct  419  IKHGRDTESLDITIRLTL-ARQNLHVLVCDNGIGMSSSRLQYVRQSLNNDVFDTKHLGLN  477

Query  348  NVKKRLIAYYGSSVKFQIYCARELYTIV  375
            ++  + +  YGS  +  I+  R   T++
Sbjct  478  HLHNKAMIQYGSHARLHIFSKRNQGTLI  505



Lambda      K        H        a         alpha
   0.327    0.139    0.421    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3327060


  Database: 6f9800519821a57f4374fe7136317114.SwissProt.fasta
    Posted date:  May 9, 2024  6:31 AM
  Number of letters in database: 11,162
  Number of sequences in database:  20



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40