BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: d46424a24419d6fc62f836c75c042ba6.SwissProt.fasta
7 sequences; 2,828 total letters
Query= ACIAD0313
Length=474
Score E
Sequences producing significant alignments: (Bits) Value
Q5E6C7 Glutamine transporter 1 [Aliivibrio fischeri (strain ATCC ... 506 0.0
P46231 Uncharacterized membrane protein VP2115 [Vibrio parahaemol... 495 1e-177
P44640 Uncharacterized membrane protein HI_0325 [Haemophilus infl... 481 7e-172
O32105 Putative amino acid transporter YuiF [Bacillus subtilis (s... 450 7e-160
Q57493 Uncharacterized transporter HI_0092 [Haemophilus influenza... 61.2 1e-13
P40118 Protein CbxX, chromosomal [Cupriavidus necator (strain ATC... 35.8 1e-05
Q04540 Protein CbxX, plasmid [Cupriavidus necator (strain ATCC 17... 35.8 1e-05
>Q5E6C7 Glutamine transporter 1 [Aliivibrio fischeri (strain ATCC
700601 / ES114)]
Length=442
Score = 506 bits (1303), Expect = 0.0
Identities = 258/475 (54%), Positives = 341/475 (72%), Gaps = 35/475 (7%)
Query 1 MNAVVIAIAVMFILSLARVSVVLTLVISAVVGGLVAGLSLSDTVQAFNAGLGDGAEVALA 60
MN ++++++VM IL+L RV+VV+ L SA++GGLV GLSLS+T+ AF GLG GA +AL+
Sbjct 1 MNPIILSVSVMLILALLRVNVVVALTFSALIGGLVGGLSLSETISAFEGGLGGGATIALS 60
Query 61 YAVLGAFALALSKSGLPDLLAHKLIGLLGMEASKSREKKVKFLLLVILLIAAIFSQNLIP 120
YA+LGAFA+A+SKSG+ DLLAH +I + + + VK+LLL ++L+ I SQN++P
Sbjct 61 YAMLGAFAVAISKSGVTDLLAHSVIKRINGKENIHAATGVKYLLLCLILLVTISSQNVVP 120
Query 121 VHIAFIPVLVPPLLKVMNHLKLDRRAAACVLTLGLVGTYIFLPVGFGAIFLEQILMGNIN 180
VHIAFIP+L+PPLL+V N LKLDRR ACVLT GLV Y+ LPVGFG IFL IL+ N++
Sbjct 121 VHIAFIPILIPPLLQVFNKLKLDRRLVACVLTFGLVTPYMILPVGFGGIFLNNILLKNLH 180
Query 181 KIGTQYGLHVDRWMMPMGMAIPVVGMVVGTLVAVFISYRKPRHYQ--DRAVARVTSIDLD 238
L V +P+ MA+P +GMVVG L+AVFISYRKPR Y D + TS++
Sbjct 181 ----DNHLDVLASQVPLAMALPALGMVVGLLIAVFISYRKPRTYAEVDNSELAPTSVE-- 234
Query 239 KPLRSDEHVTHNLREDAEELKHEAEQVPYISKKTMLMAVIAIALTLVAQLYSGSMILGGL 298
P +K+ + ++++AI L QLY+GSMI+G L
Sbjct 235 ---------------------------PTFNKRHIQISILAIIAALSVQLYAGSMIIGAL 267
Query 299 VGFAVLSTAGIFKWQDADDVFVQGMRMMALVGFIMISAAGFASVMTHTGDIGHLVNGVVH 358
GF V + G+ W++ DVF +G+ MMA++GFIMISAAGFA+VM TG + LV +
Sbjct 268 AGFMVFTFGGVIAWKETQDVFTRGVHMMAMIGFIMISAAGFAAVMKATGGVETLVQALST 327
Query 359 IIGDNRALAAFLMLFIGLFVTIGIGSSFSSVPVLAVIYVPLCVQFGFSPLATIALIGTAA 418
IGDN+ LAA LML +GL VT+GIGSSFS++P++A IYVPL + FGFSP+ATIAL+GTAA
Sbjct 328 SIGDNKPLAALLMLIVGLLVTMGIGSSFSTIPIIATIYVPLAIAFGFSPMATIALVGTAA 387
Query 419 ALGDAGSPASDSTLGPTAGLGVDGQHDHIWDTVIPTFVHFNIPLLIFGWIAAMVL 473
ALGDAGSPASDSTLGPT+GL DGQH+H+W+TV+PTF+H+N+PL+IFGWIAAMVL
Sbjct 388 ALGDAGSPASDSTLGPTSGLNSDGQHEHVWETVVPTFLHYNLPLIIFGWIAAMVL 442
>P46231 Uncharacterized membrane protein VP2115 [Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633)]
Length=441
Score = 495 bits (1275), Expect = 1e-177
Identities = 256/473 (54%), Positives = 335/473 (71%), Gaps = 32/473 (7%)
Query 1 MNAVVIAIAVMFILSLARVSVVLTLVISAVVGGLVAGLSLSDTVQAFNAGLGDGAEVALA 60
MN VVI++ VM +L+L RV+VV+ L SA+VGGLVAG+SL DTV AF +GLG GA +AL+
Sbjct 1 MNPVVISVCVMLVLALMRVNVVVALTFSAIVGGLVAGMSLGDTVAAFESGLGGGATIALS 60
Query 61 YAVLGAFALALSKSGLPDLLAHKLIGLLGMEASKSREKKVKFLLLVILLIAAIFSQNLIP 120
YA+LG FA+A+SKSG+ DLLA +I L + S + +K+ +LV L++ + SQN+IP
Sbjct 61 YAMLGTFAVAISKSGITDLLAKSVIKRLNGKESAASTTGLKYAVLVALVLVTMSSQNVIP 120
Query 121 VHIAFIPVLVPPLLKVMNHLKLDRRAAACVLTLGLVGTYIFLPVGFGAIFLEQILMGNIN 180
VHIAFIP+L+PPLL V LKLDRR ACVLT GL+ Y+ LPVGFG IFL IL+ N++
Sbjct 121 VHIAFIPILIPPLLGVFAKLKLDRRLIACVLTFGLITPYMVLPVGFGGIFLNNILLKNLH 180
Query 181 KIGTQYGLHVDRWMMPMGMAIPVVGMVVGTLVAVFISYRKPRHYQDRAVARVTSIDLDKP 240
G + +V +P M +P GM+ G L+A+F+SYRKPR Y++ + V
Sbjct 181 DNGLE---NVVASQVPTAMLLPGAGMIFGLLLAIFVSYRKPREYKETELTVV-------- 229
Query 241 LRSDEHVTHNLREDAEELKHEAEQVPYISKKTMLMAVIAIALTLVAQLYSGSMILGGLVG 300
HE + I+K+ +L+A + I L QLY+GSMI+G L G
Sbjct 230 -------------------HETDHS--INKQHILVAALGIIAALGVQLYTGSMIIGALAG 268
Query 301 FAVLSTAGIFKWQDADDVFVQGMRMMALVGFIMISAAGFASVMTHTGDIGHLVNGVVHII 360
F V + G+ W++ DVF +G+ MMA++GFIMI+AAGFA+VM TG + LV + I
Sbjct 269 FMVFTFGGVIAWKETHDVFTKGVHMMAMIGFIMIAAAGFAAVMKQTGGVETLVQSLSTSI 328
Query 361 GDNRALAAFLMLFIGLFVTIGIGSSFSSVPVLAVIYVPLCVQFGFSPLATIALIGTAAAL 420
GDN+ LAA LML +GL VT+GIGSSFS++P+LA IYVPL + FGFSP+ATIAL+GTAAAL
Sbjct 329 GDNKPLAALLMLVVGLLVTMGIGSSFSTIPILATIYVPLSLAFGFSPMATIALVGTAAAL 388
Query 421 GDAGSPASDSTLGPTAGLGVDGQHDHIWDTVIPTFVHFNIPLLIFGWIAAMVL 473
GDAGSPASDSTLGPT+GL DGQH+HIW+TV+PTF+H+NIPL+IFGWIAAMVL
Sbjct 389 GDAGSPASDSTLGPTSGLNADGQHEHIWETVVPTFIHYNIPLIIFGWIAAMVL 441
>P44640 Uncharacterized membrane protein HI_0325 [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=450
Score = 481 bits (1238), Expect = 7e-172
Identities = 235/472 (50%), Positives = 327/472 (69%), Gaps = 25/472 (5%)
Query 2 NAVVIAIAVMFILSLARVSVVLTLVISAVVGGLVAGLSLSDTVQAFNAGLGDGAEVALAY 61
N VVI+I V+ LSL R++V++ LVI+A+ G + L L+ T++ F GLG GAEVA+ Y
Sbjct 4 NPVVISIIVLLALSLLRINVIIALVIAALTAGFIGDLGLTKTIETFTGGLGGGAEVAMNY 63
Query 62 AVLGAFALALSKSGLPDLLAHKLIGLLGMEASKSREKKVKFLLLVILLIAAIFSQNLIPV 121
A+LGAFA+A+SKSG+ DL+A+K+I + + K+ + +L + AI SQNL+PV
Sbjct 64 AILGAFAIAISKSGITDLIAYKIITKMNKTPTAGNLTWFKYFIFAVLALFAISSQNLLPV 123
Query 122 HIAFIPVLVPPLLKVMNHLKLDRRAAACVLTLGLVGTYIFLPVGFGAIFLEQILMGNINK 181
HIAFIP++VPPLL + N LK+DRRA ACVLT GL TYI LPVGFG IF+E IL+ NIN+
Sbjct 124 HIAFIPIVVPPLLSIFNRLKIDRRAVACVLTFGLTATYILLPVGFGKIFIESILVKNINQ 183
Query 182 IGTQYGLHVDRWMMPMGMAIPVVGMVVGTLVAVFISYRKPRHYQDRAVARVTSIDLDKPL 241
G GL + + + M +PV+GM++G L A+FI+YRKPR Y
Sbjct 184 AGATLGLQTNVAQVSLAMLLPVIGMILGLLTAIFITYRKPREY----------------- 226
Query 242 RSDEHVTHNLREDAEELKHEAEQVPYISKKTMLMAVIAIALTLVAQLYSGSMILGGLVGF 301
N+ + K + I K ++ ++IAI T QL + S I+GGL+G
Sbjct 227 --------NINVEEATTKDIEAHIANIKPKQIVASLIAIVATFATQLVTSSTIIGGLIGL 278
Query 302 AVLSTAGIFKWQDADDVFVQGMRMMALVGFIMISAAGFASVMTHTGDIGHLVNGVVHIIG 361
+ GIFK ++++D+F QG+R+MA++GF+MI+A+GFA+V+ T + LV + +
Sbjct 279 IIFVLCGIFKLKESNDIFQQGLRLMAMIGFVMIAASGFANVINATTGVTDLVQSLSSGVV 338
Query 362 DNRALAAFLMLFIGLFVTIGIGSSFSSVPVLAVIYVPLCVQFGFSPLATIALIGTAAALG 421
++ +AA LML +GL +T+GIGSSFS+VP++ IYVPLC+ FGFSPLATI+++G AAALG
Sbjct 339 QSKGIAALLMLVVGLLITMGIGSSFSTVPIITSIYVPLCLSFGFSPLATISIVGVAAALG 398
Query 422 DAGSPASDSTLGPTAGLGVDGQHDHIWDTVIPTFVHFNIPLLIFGWIAAMVL 473
DAGSPASDSTLGPT+GL +DG+HDHIWD+V+PTF+H+NIPLL+FGWIAAM L
Sbjct 399 DAGSPASDSTLGPTSGLNMDGKHDHIWDSVVPTFIHYNIPLLVFGWIAAMYL 450
>O32105 Putative amino acid transporter YuiF [Bacillus subtilis
(strain 168)]
Length=442
Score = 450 bits (1158), Expect = 7e-160
Identities = 235/479 (49%), Positives = 322/479 (67%), Gaps = 43/479 (9%)
Query 1 MNAVVIAIAVMFILSLARVSVVLTLVISAVVGGLVAGLSLSDTVQAFNAGLGDGAEVALA 60
MNAVVIA+ +M +LSL RV++V+ L+I A+ GGL GL L +TV+AF GLG A VA++
Sbjct 1 MNAVVIAVLLMLVLSLLRVNIVIALIIGALAGGLTGGLGLGETVKAFTDGLGGNATVAVS 60
Query 61 YAVLGAFALALSKSGLPDLLAHKLIGLLGMEASKSREKKVKFLLLVILLIAAIFSQNLIP 120
YA+LGAFA AL+K+GLPD + + L+G + ++ K L+++I+LI + FSQN++P
Sbjct 61 YAMLGAFAAALTKTGLPDAMVEASVKLIGNKEDSRKKALSKVLIVLIILIVSCFSQNVVP 120
Query 121 VHIAFIPVLVPPLLKVMNHLKLDRRAAACVLTLGLVGTYIFLPVGFGAIFLEQILMGNIN 180
VHIAFIPVL+PPLLK+ N L++DRR ACV+T GL YI LPVGFG IF G +
Sbjct 121 VHIAFIPVLIPPLLKIFNELEMDRRLIACVITFGLTAPYILLPVGFGQIF-----QGMLK 175
Query 181 KIGTQYGLHVDRWMMPMGMAIPVVGMVVGTLVAVFISYRKPRHYQDRAVARVTSIDLDKP 240
GL+V +P + IPV GMVVG +++V + YRKP+ Y+ + ++
Sbjct 176 DNMADAGLNVPLADIPYALIIPVAGMVVGLILSVIV-YRKPKQYETKDISG--------- 225
Query 241 LRSDEHVTHNLREDAEELKHEAEQVPYISKKTMLMAVIAIALTLVAQLYSGS------MI 294
AE PY ++K++ +AV+AI ++L QLY MI
Sbjct 226 ---------------------AEASPY-TRKSIGIAVLAIVVSLGVQLYLSQTLGVEGMI 263
Query 295 LGGLVGFAVLSTAGIFKWQDADDVFVQGMRMMALVGFIMISAAGFASVMTHTGDIGHLVN 354
+G L G VL +G+ K +AD + GM +MA +GF+M+ AAGF++V+T TGD+ LV
Sbjct 264 MGALAGLIVLFVSGVMKRDEADSLITDGMVLMAFIGFVMLVAAGFSNVLTKTGDVESLVK 323
Query 355 GVVHIIGDNRALAAFLMLFIGLFVTIGIGSSFSSVPVLAVIYVPLCVQFGFSPLATIALI 414
IG +++L A LML +GL +T+GIGSSF+++PV+ I+VPLC+Q GFSP+ATIA+I
Sbjct 324 TSAGFIGHSQSLGALLMLIVGLLITMGIGSSFATIPVITTIFVPLCMQLGFSPMATIAII 383
Query 415 GTAAALGDAGSPASDSTLGPTAGLGVDGQHDHIWDTVIPTFVHFNIPLLIFGWIAAMVL 473
G AAALGDAGSPASDSTLGPT+GL DGQH HIWDT +PTF+ +NIPL+IFGWIAA+VL
Sbjct 384 GAAAALGDAGSPASDSTLGPTSGLSADGQHHHIWDTCVPTFIFYNIPLVIFGWIAALVL 442
>Q57493 Uncharacterized transporter HI_0092 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=419
Score = 61.2 bits (147), Expect = 1e-13
Identities = 89/424 (21%), Positives = 168/424 (40%), Gaps = 69/424 (16%)
Query 5 VIAIAVMFILSLARVSVVLTLVISAVVGGLVAGLSLSDTVQAFNAGLGDGAEVALAYAVL 64
++A+ V L L +VS +++ A+VGGL+ G LS TV G +
Sbjct 10 LVALIVAIFLILKKVSPAYGMLVGALVGGLIGGADLSQTVSLMIGGAQGITTAVMRILAA 69
Query 65 GAFALALSKSGLPDLLAHKLIGLLGMEASKSREKKVKFLLLVILLIAAIFSQNLIPVHIA 124
G A L +SG + + + LG ++R L +IL +F V +A
Sbjct 70 GVLAGVLIESGAANSITETITNKLG----ETRALLALALATMILTAVGVF------VDVA 119
Query 125 FIPVLVPPLLKVMNHLKLDRRAAACVLTLGLVGTYIFLPVGFGAIFLEQILMGNINKIGT 184
I V P+ ++ + D AA +L + +G G I+ N N I
Sbjct 120 VI--TVSPIALALSR-RSDLSKAAILLAM----------IGGGK--AGNIMSPNPNAIAA 164
Query 185 QYGLHVDRWMMPMGMAIPVVGMVVGTLVAVFISYRKPRHYQDRAVARVTSIDLDKPLRSD 244
H+ + M IP + G ++ F++ R +
Sbjct 165 ADTFHLPLTSVMMAGIIPA---LFGLILTYFLAKRL--------------------INKG 201
Query 245 EHVTHNLREDAEELKHEAEQVPYISKKTM--LMAVIAIALTLVAQLYSGSMI---LGGLV 299
VT D E + E + +P + L+A++ +AL + + +I LGGL+
Sbjct 202 SKVT-----DKEVIVLETQNLPSFLTALVAPLVAILLLALRPLFDIKVDPLIALPLGGLI 256
Query 300 GFAVLSTAGIFKWQDADDVFVQGMRMMALVGFIMISAAGFASVMTHTGDIGHLVNGVVHI 359
G + K ++ + + G+ M V +++ A ++ ++G L+ G+ H
Sbjct 257 GAFCMG-----KLRNINSYAINGLSKMTPVAIMLLGTGALAGIIANSGLKEVLIQGLEH- 310
Query 360 IGDNRALAAFLMLFI-GLFVTIGIGSSFSSVPVLAVIYVPLCVQFGFSPLATIALIGTAA 418
L ++++ I G+ +++ S+ + V + ++ ++ G S LA A+I A
Sbjct 311 ----SGLPSYILAPISGVLMSLATASTTAGTAVASNVFSSTLLELGVSSLAGAAMIHAGA 366
Query 419 ALGD 422
+ D
Sbjct 367 TVFD 370
Score = 33.1 bits (74), Expect = 8e-05
Identities = 46/182 (25%), Positives = 74/182 (41%), Gaps = 18/182 (10%)
Query 265 VPYISKKTMLMAVIAIALTLVAQLYSGSM--ILGGLVGFAVLSTAGIFKWQDADDVFVQG 322
V I L+ I + L V+ Y + ++GGL+G A LS A +
Sbjct 4 VSAIGALVALIVAIFLILKKVSPAYGMLVGALVGGLIGGADLSQTVSLMIGGAQGITTAV 63
Query 323 MRMMALVGFIMISAAGFASVMTHTGDIGHLVNGVVHIIGDNRALAAFLMLFIGLFVTIGI 382
MR++A A A V+ +G + + + +G+ RAL A L L + +G+
Sbjct 64 MRILA--------AGVLAGVLIESGAANSITETITNKLGETRALLA-LALATMILTAVGV 114
Query 383 GSSFSSVPVLAVIYVPLCVQFGFSPLATIALIGTAAALGDAGSPASDSTLGPTAGLGVDG 442
F V V+ V + L + S L+ A++ G AG+ S + P A D
Sbjct 115 ---FVDVAVITVSPIALALS-RRSDLSKAAILLAMIGGGKAGNIMSPN---PNAIAAADT 167
Query 443 QH 444
H
Sbjct 168 FH 169
Score = 22.7 bits (47), Expect = 0.15
Identities = 26/113 (23%), Positives = 44/113 (39%), Gaps = 19/113 (17%)
Query 1 MNAVVIAIAVMFILSLA-----RVSVVLTLVISAVVGGLVAGLSLSDTVQAFNAGLGDGA 55
+ A+V + + +L+L +V ++ L + ++G G + A N GL
Sbjct 221 LTALVAPLVAILLLALRPLFDIKVDPLIALPLGGLIGAFCMGKLRNINSYAIN-GLSKMT 279
Query 56 EVALAYAVLGAFA-------------LALSKSGLPDLLAHKLIGLLGMEASKS 95
VA+ GA A L SGLP + + G+L A+ S
Sbjct 280 PVAIMLLGTGALAGIIANSGLKEVLIQGLEHSGLPSYILAPISGVLMSLATAS 332
>P40118 Protein CbxX, chromosomal [Cupriavidus necator (strain
ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier
337)]
Length=317
Score = 35.8 bits (81), Expect = 1e-05
Identities = 43/144 (30%), Positives = 69/144 (48%), Gaps = 16/144 (11%)
Query 58 ALAYAVLGAFALALSKSGLPDLLAHKLIGLLGMEASKSREKKVKFLLLVILLIAAI-FSQ 116
A A ++ G+ A +L+ SG+ +LLA L+G++ K+R + + LLLV L AA FS
Sbjct 15 APAASLPGSLAESLASSGITELLAQLDRELIGLKPVKARIRDIAALLLVDKLRAARGFSA 74
Query 117 NLIPVHIAFI-------PVLVPPLLKVMNHLKLDRRAAACVLTL-GLVGTYIFLPVGFGA 168
+H+ F + + ++++ L RR +T LVG YI G A
Sbjct 75 GAPSLHMCFTGNPGTGKTTVAMRMAQILHQLGYVRRGHLVAVTRDDLVGQYI----GHTA 130
Query 169 IFLEQIL---MGNINKIGTQYGLH 189
++IL MG + I Y L+
Sbjct 131 PKTKEILKKAMGGVLFIDEAYYLY 154
>Q04540 Protein CbxX, plasmid [Cupriavidus necator (strain ATCC
17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier
337)]
Length=317
Score = 35.8 bits (81), Expect = 1e-05
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query 58 ALAYAVLGAFALALSKSGLPDLLAHKLIGLLGMEASKSREKKVKFLLLVILLIAAI-FSQ 116
A A ++ G+ A +L+ SG+ +LLA L+G++ K+R + + LLLV L AA FS
Sbjct 15 AQAASLPGSLAESLASSGITELLAQLDRELIGLKPVKARIRDIAALLLVDKLRAARGFSA 74
Query 117 NLIPVHIAFI-------PVLVPPLLKVMNHLKLDRRAAACVLTL-GLVGTYI 160
+H+ F + + ++++ L RR +T LVG YI
Sbjct 75 GAPSLHMCFTGNPGTGKTTVAMRMAQILHQLGYVRRGHLVAVTRDDLVGQYI 126
Lambda K H a alpha
0.329 0.143 0.417 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1072568
Database: d46424a24419d6fc62f836c75c042ba6.SwissProt.fasta
Posted date: May 20, 2024 1:14 AM
Number of letters in database: 2,828
Number of sequences in database: 7
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
