BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 4eb0731889a68678658b8d4190d32718.SwissProt.fasta
3 sequences; 6,118 total letters
Query= ACIAD0332
Length=255
Score E
Sequences producing significant alignments: (Bits) Value
A0A1L8GXY4 Cilia- and flagella-associated protein 43 [Xenopus lae... 36.6 7e-06
Q91VW5 Golgin subfamily A member 4 [Mus musculus] 34.7 3e-05
Q5U4E6 Golgin subfamily A member 4 [Rattus norvegicus] 34.7 3e-05
>A0A1L8GXY4 Cilia- and flagella-associated protein 43 [Xenopus
laevis]
Length=1621
Score = 36.6 bits (83), Expect = 7e-06
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query 161 EMRVLLEQKLGSNEKVGQDHAIFMIELKILDKAKQMFALLKQYPWEKKDGMILFHENAQV 220
EM+ L++++ +EK+ QD FM EL +L K F L + K G + +
Sbjct 1350 EMQAFLDKRIEEDEKMRQDIENFMQELNVLRNEKMKFQLDLTVQFLLKQGQVELENTDLI 1409
Query 221 RKFNG---LYQDVLK-LNAKIESIKKKNVAAL 248
F L++ V++ LN+ I+ + ++ +A++
Sbjct 1410 PSFEDAILLHRSVIEDLNSTIKGLGEQKIASM 1441
>Q91VW5 Golgin subfamily A member 4 [Mus musculus]
Length=2238
Score = 34.7 bits (78), Expect = 3e-05
Identities = 23/78 (29%), Positives = 38/78 (49%), Gaps = 7/78 (9%)
Query 91 ARNAYLRTLKAAKWDTFLNVDRLELDKKQKYAETENMLAAVSEASEQY-------QVQYE 143
+R+ YL+ + + L ++ LEL KK E+EN L + + +E Y + E
Sbjct 538 SRSEYLKLTQEKEQQESLALEELELQKKAILTESENKLQELGQEAEAYRTRILELETSLE 597
Query 144 KIHQAFLTQAQSLSVEPE 161
K Q TQ++ L+V E
Sbjct 598 KSLQESKTQSEHLAVHLE 615
Score = 28.1 bits (61), Expect = 0.003
Identities = 38/166 (23%), Positives = 74/166 (45%), Gaps = 31/166 (19%)
Query 97 RTLKAAKWDTFLNVDRLELDKKQKYAETENML----AAVSEASEQYQVQYEKIHQAFLTQ 152
RTLK++ ++ E K A+ E +L A E +Q Q EK ++ +TQ
Sbjct 1301 RTLKSSFQQVTNQLEEKEKQIKTMKADIEGLLTEKEALQQEGGQQRQAASEK--ESCITQ 1358
Query 153 -----AQSLSVEPEMRVLLEQKLGSNEKVGQDHAIFMIELKIL----DKAKQMFALLKQY 203
A++++ +R L +K + + + +L+ DKA+ + AL KQ
Sbjct 1359 LKKELAENINAVTLLREELSEKKSEIASLSKQLSDLGAQLESSISPSDKAEAISALSKQ- 1417
Query 204 PWEKKDGMILFHENAQVRKFNGLYQDVLKLNAKIESIKKKNVAALE 249
HE +++ L + +L+ K++++ K+ ++ALE
Sbjct 1418 -----------HEEQELQ----LQAQLQELSLKVDALSKEKMSALE 1448
Score = 27.3 bits (59), Expect = 0.006
Identities = 29/144 (20%), Positives = 54/144 (38%), Gaps = 10/144 (7%)
Query 110 VDRLELDKKQKYAETENMLAAVSEASEQYQVQYEKIHQAFLTQAQSLSVEPEMRVLLEQK 169
V +E KK E + A V + Q EK+ Q L + Q
Sbjct 862 VVEMETHKKHVCEELDAQRAQVQQLERQRSELEEKVRSLAQLQDSQLKNSTVEKEQARQS 921
Query 170 LGSNEKVGQDHAIFMIELKILDKAKQMFALLKQYPWEKKDGMILFHENAQVRKFNGLYQD 229
L E I L++ ++ + +LKQ K++ + + HE + KF +
Sbjct 922 LMEKEN---------IILQMREEQAKEIEILKQTLSSKEESISILHEEYET-KFKNQEKR 971
Query 230 VLKLNAKIESIKKKNVAALEDDLK 253
+ K+ K + +++ L+ + K
Sbjct 972 MEKIKQKAKEMQETKKKLLDQEAK 995
Score = 21.9 bits (45), Expect = 0.29
Identities = 41/163 (25%), Positives = 73/163 (45%), Gaps = 29/163 (18%)
Query 26 YIQKRKSQDSSQMFDLVMSEKMGQLYDQA--QDWSTPVQLNIHDKRLA---GNYKKMSEF 80
Y Q+R ++ S + L E++G+ D + T ++L H L G KK E
Sbjct 1566 YNQQRDTEHSGLVQRLQHLEELGEEKDNKVREAEETVLRLREHVSSLEAELGTVKKELEH 1625
Query 81 LLNYWIENINARNAYLRTLKAAKWDTFLNVDRLELDKKQKY---AETENMLAAV-----S 132
+ + ++ +R+ L+ L+ D+LEL+ K + E +AA+ S
Sbjct 1626 VNS----SVKSRDGELKALE----------DKLELESAAKVELKRKAEQKIAAIRKQLLS 1671
Query 133 EASEQYQVQYEKIHQAFLTQAQSLSVEPEMRV-LLEQKLGSNE 174
+ E+ Q +Y K + L++ + E E +V LE KL + E
Sbjct 1672 QMEEKTQ-RYAKDTENRLSELSAQLKEREKQVHSLEDKLKNLE 1713
Score = 21.6 bits (44), Expect = 0.38
Identities = 30/138 (22%), Positives = 57/138 (41%), Gaps = 5/138 (4%)
Query 114 ELDKKQKYAET-ENMLAAVSEASEQYQVQYEKIHQAFLTQAQSLSVEPEMRVLLEQKLGS 172
+LDKKQ E+ + L+ A +Q + + Q+L E E + Q+
Sbjct 698 KLDKKQMELESVSSELSEALRARDQLAEELSVLRGDADKMKQALEAELEEQRRHHQREVG 757
Query 173 NEKVGQDHAIFMIELKILDKAKQMFALLKQYPWEKKDGMILFHE-NAQVRKFNGLYQDVL 231
+ Q+ + E + D+ ++ ALL + ++ + A ++K G Q L
Sbjct 758 SISEQQELTVRRAEKALKDELSRLGALLDERDEHLRERQARVQDLEAHLQKSAGELQQAL 817
Query 232 KLNAKIESIKKKNVAALE 249
AK++ + + AA E
Sbjct 818 ---AKLDLLHSEQSAARE 832
Score = 20.0 bits (40), Expect = 1.2
Identities = 34/144 (24%), Positives = 62/144 (43%), Gaps = 22/144 (15%)
Query 28 QKRKSQDSSQMFDLVMSEK---------MGQLYDQAQDWSTPV-QLNIHDKRLAGNYKKM 77
Q+++ Q+S + +L + +K + +L +A+ + T + +L ++ K
Sbjct 547 QEKEQQESLALEELELQKKAILTESENKLQELGQEAEAYRTRILELETSLEKSLQESKTQ 606
Query 78 SEFLLNYWIENINARNAYLRTLKAAKWDTFLNVDRLELDKKQKYAETENML-----AAVS 132
SE L + N N L L A + T V+ L+ + + E L AAV
Sbjct 607 SEHLAVHLEAEKNKHNKELTAL-AEQHRT--EVEGLQQQQDSLWTERLQSLSQQHQAAVE 663
Query 133 EASEQYQVQYEKIHQAFLTQAQSL 156
E E+YQ + + A L + +SL
Sbjct 664 ELREKYQQEKD----ALLKEKESL 683
Score = 19.6 bits (39), Expect = 1.5
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 21/70 (30%)
Query 127 MLAAVSEASEQYQVQYEKIHQAFLTQAQSLSVEPEMRVLLEQKLGSNEKVGQDHAIFMIE 186
++ ++SE Q Q Q EK+ E ++ L +KL E+ + E
Sbjct 1136 VIVSLSERESQLQSQVEKL-------------EADLGCSLSEKLSLQEE--------LAE 1174
Query 187 LKILDKAKQM 196
LK+L Q+
Sbjct 1175 LKLLADKSQL 1184
>Q5U4E6 Golgin subfamily A member 4 [Rattus norvegicus]
Length=2259
Score = 34.7 bits (78), Expect = 3e-05
Identities = 45/188 (24%), Positives = 85/188 (45%), Gaps = 24/188 (13%)
Query 91 ARNAYLRTLKAAKWDTFLNVDRLELDKKQKYAETENMLAAVSEASE-------QYQVQYE 143
+R+ YL+ + + L ++ LEL KK E+EN L + + +E + + E
Sbjct 564 SRSEYLKLTQEKEQQESLALEELELQKKAILTESENKLQGLRQEAEVHRTRIRELETSLE 623
Query 144 KIHQAFLTQAQSLSV---------EPEMRVLLEQKLGSNEKV-GQDHAIFMIELKILDKA 193
K Q TQ++ L+V + E+ L E+ E + Q H+++ L+ L +
Sbjct 624 KSLQESRTQSERLAVHLEAEKSKHKTELTALAEKHRTELEGLQQQQHSLWTERLQNLSQQ 683
Query 194 KQ-MFALLKQYPWEKKDGMILFHEN---AQVRKFNGLYQDVL-KLNAKIESIKKKNVAAL 248
Q L++ ++KD ++ E+ A ++ N + L K ++ES+ + AL
Sbjct 684 HQAAVEELREKHQQEKDALLKEKESLFQAHIQDMNEKTLEKLDKKQMELESVSSELSEAL 743
Query 249 E--DDLKE 254
+ D L E
Sbjct 744 KARDQLAE 751
Score = 30.4 bits (67), Expect = 6e-04
Identities = 39/201 (19%), Positives = 77/201 (38%), Gaps = 29/201 (14%)
Query 53 QAQDWSTPVQLNIHDKRLAGNYKKMSEFLLNYWIENINARNAYLRTLKAAKWDTFLNVDR 112
QAQ +T Q ++++LA +K+S+ L+ K V
Sbjct 850 QAQQSTTHAQTGAYEEQLAQMQQKVSD-------------------LETEKNLLTKQVVE 890
Query 113 LELDKKQKYAETENMLAAVSEASEQYQVQYEKIHQAFLTQAQSLSVEPEMRVLLEQKLGS 172
+E KK+ E + A V + Q +K+ Q L + +Q L
Sbjct 891 VETQKKRVCVELDAQRAQVQQLERQRSELEDKVKSLAQLQESQLKNSHVEKEQAQQILTE 950
Query 173 NEKVGQDHAIFMIELKILDKAKQMFALLKQYPWEKKDGMILFHENAQVRKFNGLYQDVLK 232
E V L++ ++ + +LKQ + K++ + + HE + KF + + K
Sbjct 951 KENV---------ILQMREEQAKEIEILKQKLFSKEESISILHEEYET-KFKNQEKRMEK 1000
Query 233 LNAKIESIKKKNVAALEDDLK 253
+ K + +++ L+ + K
Sbjct 1001 IKQKAKEMQEMKKKLLDQEAK 1021
Score = 26.6 bits (57), Expect = 0.010
Identities = 35/149 (23%), Positives = 67/149 (45%), Gaps = 30/149 (20%)
Query 110 VDRLELDKKQKYAETENMLAAVSEASEQYQVQYEKIHQAFLTQAQS-LSVEPEMRVLLEQ 168
+ ++ D + AE E A E +Q QV EK ++ +TQ + LS LL +
Sbjct 1347 IKTMKADMEGLIAEKE---ALQQEGGQQQQVASEK--ESCITQLKKELSENINAVTLLRE 1401
Query 169 KLGS--------NEKVGQDHAIFMIELKILDKAKQMFALLKQYPWEKKDGMILFHENAQV 220
+L ++++ A + DKA+ + AL KQ HE ++
Sbjct 1402 ELSEKKSEIASLSKQLSDVSAQLENSISPSDKAEAISALSKQ------------HEEQEL 1449
Query 221 RKFNGLYQDVLKLNAKIESIKKKNVAALE 249
+ L + +L++K++++ K+ ++ALE
Sbjct 1450 Q----LQAQLRELSSKVDALSKEKMSALE 1474
Score = 21.9 bits (45), Expect = 0.29
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query 114 ELDKKQKYAETE--NMLAAVSEASE---QYQVQYEKIHQAFLTQAQSLSVEPEMRVLLEQ 168
E++KK+ ETE A V E + Q + + E +++A +Q E V Q
Sbjct 1542 EMEKKECDLETELKTRTARVVELEDCITQRKKEVESLNEALRNCSQQRDTEHSGLVQTLQ 1601
Query 169 KLGSNEKVGQ--DHAIFMIELKILDKAKQMFALLKQYPWEKKDGMILFHENAQVRKFNG- 225
+L E++GQ D+ + E +L +++ +L + +K+ L N+ V+ +G
Sbjct 1602 RL---EELGQEKDNKVREAEETVLGLRERVSSLEAELRVVRKE---LDDVNSSVKSRDGE 1655
Query 226 --LYQDVLKLN--AKIESIKK--KNVAALEDDL 252
+D L+L AK+E +K + +AA+ L
Sbjct 1656 LKALEDKLELESAAKVELKRKAEQKLAAIRKQL 1688
Score = 20.8 bits (42), Expect = 0.67
Identities = 26/122 (21%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query 118 KQKYAETENMLAAVSEASEQYQVQYEKIHQAFLTQAQSLSVEPEMRVLLEQKLGSNEKVG 177
+Q+ EN+L E ++ Q A LS + ++ LE++L EK+
Sbjct 332 QQRVKRQENLLQRCKETIGSHKEQC----------ALLLSEKEALQEQLEERLQELEKMK 381
Query 178 QDHAIFMIELKILDKAKQMFALLKQYPWEKKDGMILFHENAQVRKFNGLYQD-VLKLNAK 236
+ H + K++ + + L++Q E+ GM++ Q+ + L D + +L +
Sbjct 382 ELH--MAEKTKLITQLRDAKNLIEQL--EQDKGMVITEAKRQMLETLELKDDEIAQLRSH 437
Query 237 IE 238
I+
Sbjct 438 IQ 439
Score = 17.7 bits (34), Expect = 6.1
Identities = 12/49 (24%), Positives = 22/49 (45%), Gaps = 13/49 (27%)
Query 130 AVSEASEQYQVQYEKIHQAFLTQAQSLSVEPEMRVLLEQKLGSNEKVGQ 178
A+S++ Q Q Q EK+ E ++ L +KL E++ +
Sbjct 1165 ALSDSHAQLQSQVEKL-------------EVDLGCALNEKLSLQEELAE 1200
Lambda K H a alpha
0.320 0.133 0.371 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1243216
Database: 4eb0731889a68678658b8d4190d32718.SwissProt.fasta
Posted date: May 20, 2024 1:14 AM
Number of letters in database: 6,118
Number of sequences in database: 3
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
