Comparative Genomics

ACIAD0372 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: b936332520f29c5b9c1e08f013975f75.SwissProt.fasta
           19 sequences; 1,870 total letters



Query= ACIAD0372

Length=92
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q52983 Probable K(+)/H(+) antiporter subunit F [Rhizobium melilot...  69.7    4e-21
O68038 Probable K(+)/H(+) antiporter subunit F [Rhodobacter capsu...  68.6    1e-20
Q49W86 Na(+)/H(+) antiporter subunit F1 [Staphylococcus saprophyt...  62.0    5e-18
Q9RGZ0 Na(+)/H(+) antiporter subunit F [Alkalihalophilus pseudofi...  60.5    2e-17
Q4L4W2 Na(+)/H(+) antiporter subunit F1 [Staphylococcus haemolyti...  59.7    4e-17
A5IQI0 Putative antiporter subunit mnhF2 [Staphylococcus aureus (...  58.9    9e-17
P0C948 Putative antiporter subunit mnhF2 [Staphylococcus aureus (...  58.9    9e-17
Q2FJ10 Putative antiporter subunit mnhF2 [Staphylococcus aureus (...  58.9    9e-17
A6TZA4 Putative antiporter subunit mnhF2 [Staphylococcus aureus (...  58.9    9e-17
A7WZ82 Putative antiporter subunit mnhF2 [Staphylococcus aureus (...  58.9    9e-17
O05228 Na(+)/H(+) antiporter subunit F [Bacillus subtilis (strain...  57.0    4e-16
Q2YWT9 Na(+)/H(+) antiporter subunit F1 [Staphylococcus aureus (s...  56.6    7e-16
A5IRC5 Na(+)/H(+) antiporter subunit F1 [Staphylococcus aureus (s...  56.6    7e-16
Q2G2H6 Na(+)/H(+) antiporter subunit F1 [Staphylococcus aureus (s...  56.6    7e-16
Q2FIC8 Na(+)/H(+) antiporter subunit F1 [Staphylococcus aureus (s...  56.6    7e-16
P60694 Na(+)/H(+) antiporter subunit F1 [Staphylococcus aureus]       56.6    7e-16
Q49VH4 Putative antiporter subunit mnhF2 [Staphylococcus saprophy...  56.6    7e-16
Q6GJ42 Putative antiporter subunit mnhF2 [Staphylococcus aureus (...  56.6    7e-16
Q52965 PhaF2 protein [Rhizobium meliloti (strain 1021)]               52.0    7e-14


>Q52983 Probable K(+)/H(+) antiporter subunit F [Rhizobium meliloti 
(strain 1021)]
Length=92

 Score = 69.7 bits (169),  Expect = 4e-21
 Identities = 34/77 (44%), Positives = 50/77 (65%), Gaps = 0/77 (0%)

Query  15  ITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLIAMLGF  74
           + ++M   L R+  GP   DR+L LDTL++NA  ++I  GI  A T  FE AL+IA++GF
Sbjct  16  LALAMAFALYRMARGPRAQDRILGLDTLYINAMLMLITFGIRTANTVYFETALIIAVIGF  75

Query  75  VSTAALARYFTTGHVID  91
            S+ ALA++   G VI+
Sbjct  76  ASSIALAKFLMRGEVIE  92


>O68038 Probable K(+)/H(+) antiporter subunit F [Rhodobacter capsulatus 
(strain ATCC BAA-309 / NBRC 16581 / SB1003)]
Length=92

 Score = 68.6 bits (166),  Expect = 1e-20
 Identities = 35/89 (39%), Positives = 55/89 (62%), Gaps = 0/89 (0%)

Query  3   ILPYALGICLIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNL  62
           +L +AL     A+ ++  +  +R++LGP   DR+LAL+ L++    L IV G+   T  L
Sbjct  4   LLAFALTYAQFALALAACLAALRILLGPRAQDRVLALEALYVATMLLFIVTGMRMGTPFL  63

Query  63  FEGALLIAMLGFVSTAALARYFTTGHVID  91
           FE AL+IA+ GFVST + A++   G VI+
Sbjct  64  FEAALVIAVAGFVSTVSAAKFLLRGEVIE  92


>Q49W86 Na(+)/H(+) antiporter subunit F1 [Staphylococcus saprophyticus 
subsp. saprophyticus (strain ATCC 15305 / DSM 20229 
/ NCIMB 8711 / NCTC 7292 / S-41)]
Length=97

 Score = 62.0 bits (149),  Expect = 5e-18
 Identities = 30/84 (36%), Positives = 49/84 (58%), Gaps = 0/84 (0%)

Query  8   LGICLIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGAL  67
           L I L+ + +SM   L R+++GPS+ DR++ALD + +    +V +  I+  T  +    L
Sbjct  7   LVIALVIVALSMLGMLARVIIGPSLADRVVALDAMGIQLMAIVALFSIFLGTKYMMVAIL  66

Query  68  LIAMLGFVSTAALARYFTTGHVID  91
           LI +L F+ TA  A+Y   G VI+
Sbjct  67  LIGILAFLGTAVFAKYMDKGKVIE  90


>Q9RGZ0 Na(+)/H(+) antiporter subunit F [Alkalihalophilus pseudofirmus 
(strain ATCC BAA-2126 / JCM 17055 / OF4)]
Length=91

 Score = 60.5 bits (145),  Expect = 2e-17
 Identities = 30/84 (36%), Positives = 53/84 (63%), Gaps = 0/84 (0%)

Query  8   LGICLIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGAL  67
           L I L+ ++IS+F+C IR ++GP++ DR++ALDT  +N    + V+ +   T    E  L
Sbjct  6   LMIVLVVMSISLFVCFIRTLIGPTMSDRIVALDTFGINLIGFIGVIMMLQETLAYSEVVL  65

Query  68  LIAMLGFVSTAALARYFTTGHVID  91
           +I++L F+ + AL+++   G V D
Sbjct  66  VISILAFIGSIALSKFIERGVVFD  89


>Q4L4W2 Na(+)/H(+) antiporter subunit F1 [Staphylococcus haemolyticus 
(strain JCSC1435)]
Length=96

 Score = 59.7 bits (143),  Expect = 4e-17
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 0/82 (0%)

Query  10  ICLIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLI  69
           I LI + ISM    +R++ GP++ DR+LALD + L     + +  I+  +  L    LLI
Sbjct  8   IALIVVAISMLAMFVRIIKGPTLADRILALDAIGLQLMACIALYSIFIGSEYLLVAILLI  67

Query  70  AMLGFVSTAALARYFTTGHVID  91
            +L F+ TA  ++Y   G VI+
Sbjct  68  GILAFLGTAVFSKYMDKGKVIE  89


>A5IQI0 Putative antiporter subunit mnhF2 [Staphylococcus aureus 
(strain JH9)]
Length=100

 Score = 58.9 bits (141),  Expect = 9e-17
 Identities = 27/80 (34%), Positives = 47/80 (59%), Gaps = 0/80 (0%)

Query  12  LIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLIAM  71
           LI   I++ +CL RL+ GP+  DR++  DT       +V VL +   T +  +  +LIA+
Sbjct  14  LIIFGIALIICLFRLIKGPTTADRVVTFDTTSAVVMSIVGVLSVLMGTVSFLDSIMLIAI  73

Query  72  LGFVSTAALARYFTTGHVID  91
           + FVS+ +++R+   GHV +
Sbjct  74  ISFVSSVSISRFIGGGHVFN  93


>P0C948 Putative antiporter subunit mnhF2 [Staphylococcus aureus 
(strain NCTC 8325 / PS 47)]
Length=100

 Score = 58.9 bits (141),  Expect = 9e-17
 Identities = 27/80 (34%), Positives = 47/80 (59%), Gaps = 0/80 (0%)

Query  12  LIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLIAM  71
           LI   I++ +CL RL+ GP+  DR++  DT       +V VL +   T +  +  +LIA+
Sbjct  14  LIIFGIALIICLFRLIKGPTTADRVVTFDTTSAVVMSIVGVLSVLMGTVSFLDSIMLIAI  73

Query  72  LGFVSTAALARYFTTGHVID  91
           + FVS+ +++R+   GHV +
Sbjct  74  ISFVSSVSISRFIGGGHVFN  93


>Q2FJ10 Putative antiporter subunit mnhF2 [Staphylococcus aureus 
(strain USA300)]
Length=100

 Score = 58.9 bits (141),  Expect = 9e-17
 Identities = 27/80 (34%), Positives = 47/80 (59%), Gaps = 0/80 (0%)

Query  12  LIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLIAM  71
           LI   I++ +CL RL+ GP+  DR++  DT       +V VL +   T +  +  +LIA+
Sbjct  14  LIIFGIALIICLFRLIKGPTTADRVVTFDTTSAVVMSIVGVLSVLMGTVSFLDSIMLIAI  73

Query  72  LGFVSTAALARYFTTGHVID  91
           + FVS+ +++R+   GHV +
Sbjct  74  ISFVSSVSISRFIGGGHVFN  93


>A6TZA4 Putative antiporter subunit mnhF2 [Staphylococcus aureus 
(strain JH1)]
Length=100

 Score = 58.9 bits (141),  Expect = 9e-17
 Identities = 27/80 (34%), Positives = 47/80 (59%), Gaps = 0/80 (0%)

Query  12  LIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLIAM  71
           LI   I++ +CL RL+ GP+  DR++  DT       +V VL +   T +  +  +LIA+
Sbjct  14  LIIFGIALIICLFRLIKGPTTADRVVTFDTTSAVVMSIVGVLSVLMGTVSFLDSIMLIAI  73

Query  72  LGFVSTAALARYFTTGHVID  91
           + FVS+ +++R+   GHV +
Sbjct  74  ISFVSSVSISRFIGGGHVFN  93


>A7WZ82 Putative antiporter subunit mnhF2 [Staphylococcus aureus 
(strain Mu3 / ATCC 700698)]
Length=100

 Score = 58.9 bits (141),  Expect = 9e-17
 Identities = 27/80 (34%), Positives = 47/80 (59%), Gaps = 0/80 (0%)

Query  12  LIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLIAM  71
           LI   I++ +CL RL+ GP+  DR++  DT       +V VL +   T +  +  +LIA+
Sbjct  14  LIIFGIALIICLFRLIKGPTTADRVVTFDTTSAVVMSIVGVLSVLMGTVSFLDSIMLIAI  73

Query  72  LGFVSTAALARYFTTGHVID  91
           + FVS+ +++R+   GHV +
Sbjct  74  ISFVSSVSISRFIGGGHVFN  93


>O05228 Na(+)/H(+) antiporter subunit F [Bacillus subtilis (strain 
168)]
Length=94

 Score = 57.0 bits (136),  Expect = 4e-16
 Identities = 29/89 (33%), Positives = 53/89 (60%), Gaps = 4/89 (4%)

Query  3   ILPYALGICLIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNL  62
           IL  ALGI    + +S F+ +IR++ GP+V DR++ALD + +N   +  ++ I   T+  
Sbjct  5   ILQIALGI----MAVSTFLYVIRVIKGPTVPDRVVALDAIGINLIAITALVSILLKTSAF  60

Query  63  FEGALLIAMLGFVSTAALARYFTTGHVID  91
            +  LL+ +L F+ T A +++   G +I+
Sbjct  61  LDIILLLGILSFIGTIAFSKFLEKGEIIE  89


>Q2YWT9 Na(+)/H(+) antiporter subunit F1 [Staphylococcus aureus 
(strain bovine RF122 / ET3-1)]
Length=97

 Score = 56.6 bits (135),  Expect = 7e-16
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 0/82 (0%)

Query  10  ICLIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLI  69
           I LI + ISM   LIR+VLGPS+ DR++ALD + L    ++ +  I      +    ++I
Sbjct  9   IALIIVVISMLAMLIRVVLGPSLADRVVALDAIGLQLMAVIALFSILLNIKYMIVVIMMI  68

Query  70  AMLGFVSTAALARYFTTGHVID  91
            +L F+ TA  +++   G VI+
Sbjct  69  GILAFLGTAVFSKFMDKGKVIE  90


>A5IRC5 Na(+)/H(+) antiporter subunit F1 [Staphylococcus aureus 
(strain JH9)]
Length=97

 Score = 56.6 bits (135),  Expect = 7e-16
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 0/82 (0%)

Query  10  ICLIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLI  69
           I LI + ISM   LIR+VLGPS+ DR++ALD + L    ++ +  I      +    ++I
Sbjct  9   IALIIVVISMLAMLIRVVLGPSLADRVVALDAIGLQLMAVIALFSILLNIKYMIVVIMMI  68

Query  70  AMLGFVSTAALARYFTTGHVID  91
            +L F+ TA  +++   G VI+
Sbjct  69  GILAFLGTAVFSKFMDKGKVIE  90


>Q2G2H6 Na(+)/H(+) antiporter subunit F1 [Staphylococcus aureus 
(strain NCTC 8325 / PS 47)]
Length=97

 Score = 56.6 bits (135),  Expect = 7e-16
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 0/82 (0%)

Query  10  ICLIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLI  69
           I LI + ISM   LIR+VLGPS+ DR++ALD + L    ++ +  I      +    ++I
Sbjct  9   IALIIVVISMLAMLIRVVLGPSLADRVVALDAIGLQLMAVIALFSILLNIKYMIVVIMMI  68

Query  70  AMLGFVSTAALARYFTTGHVID  91
            +L F+ TA  +++   G VI+
Sbjct  69  GILAFLGTAVFSKFMDKGKVIE  90


>Q2FIC8 Na(+)/H(+) antiporter subunit F1 [Staphylococcus aureus 
(strain USA300)]
Length=97

 Score = 56.6 bits (135),  Expect = 7e-16
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 0/82 (0%)

Query  10  ICLIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLI  69
           I LI + ISM   LIR+VLGPS+ DR++ALD + L    ++ +  I      +    ++I
Sbjct  9   IALIIVVISMLAMLIRVVLGPSLADRVVALDAIGLQLMAVIALFSILLNIKYMIVVIMMI  68

Query  70  AMLGFVSTAALARYFTTGHVID  91
            +L F+ TA  +++   G VI+
Sbjct  69  GILAFLGTAVFSKFMDKGKVIE  90


>P60694 Na(+)/H(+) antiporter subunit F1 [Staphylococcus aureus]
Length=97

 Score = 56.6 bits (135),  Expect = 7e-16
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 0/82 (0%)

Query  10  ICLIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLI  69
           I LI + ISM   LIR+VLGPS+ DR++ALD + L    ++ +  I      +    ++I
Sbjct  9   IALIIVVISMLAMLIRVVLGPSLADRVVALDAIGLQLMAVIALFSILLNIKYMIVVIMMI  68

Query  70  AMLGFVSTAALARYFTTGHVID  91
            +L F+ TA  +++   G VI+
Sbjct  69  GILAFLGTAVFSKFMDKGKVIE  90


>Q49VH4 Putative antiporter subunit mnhF2 [Staphylococcus saprophyticus 
subsp. saprophyticus (strain ATCC 15305 / DSM 20229 
/ NCIMB 8711 / NCTC 7292 / S-41)]
Length=100

 Score = 56.6 bits (135),  Expect = 7e-16
 Identities = 28/90 (31%), Positives = 50/90 (56%), Gaps = 0/90 (0%)

Query  2   TILPYALGICLIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTN  61
           T+  + +   LI   I++ + L RL+ GP+  DR++  D        +V +L I + T +
Sbjct  4   TLTDFFITSALILFGIALLLTLFRLIKGPTTADRVVTFDAASAILMSMVGLLSIVFGTFS  63

Query  62  LFEGALLIAMLGFVSTAALARYFTTGHVID  91
             +  LLIA++ FVST +++R+   GHV +
Sbjct  64  FLDSILLIAIISFVSTVSISRFIEGGHVFN  93


>Q6GJ42 Putative antiporter subunit mnhF2 [Staphylococcus aureus 
(strain MRSA252)]
Length=100

 Score = 56.6 bits (135),  Expect = 7e-16
 Identities = 26/80 (33%), Positives = 47/80 (59%), Gaps = 0/80 (0%)

Query  12  LIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNLFEGALLIAM  71
           LI   I++ +CL RL+ GP+  DR++  DT       +V VL +   T +  +  +LIA+
Sbjct  14  LIIFGIALIICLFRLIKGPTTADRVVTFDTTSAVVMSIVGVLSVLMGTVSFLDSIMLIAI  73

Query  72  LGFVSTAALARYFTTGHVID  91
           + FVS+ +++R+   G+V +
Sbjct  74  ISFVSSVSISRFIGGGYVFN  93


>Q52965 PhaF2 protein [Rhizobium meliloti (strain 1021)]
Length=123

 Score = 52.0 bits (123),  Expect = 7e-14
 Identities = 23/81 (28%), Positives = 50/81 (62%), Gaps = 0/81 (0%)

Query  3   ILPYALGICLIAITISMFMCLIRLVLGPSVIDRLLALDTLFLNATCLVIVLGIYWATTNL  62
           +L  A G+ L+ +++++ + ++R++ GP++ DR+L LD L   A  L+ V+ +       
Sbjct  6   VLSAASGVALVLLSLALLLTVLRIIRGPTLPDRVLGLDMLVAIAIGLIAVIAVRTGFYLY  65

Query  63  FEGALLIAMLGFVSTAALARY  83
            + A+ + ++GF++T A AR+
Sbjct  66  IDIAIALGLVGFLATVAFARF  86



Lambda      K        H        a         alpha
   0.342    0.151    0.472    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 85632


  Database: b936332520f29c5b9c1e08f013975f75.SwissProt.fasta
    Posted date:  May 9, 2024  9:51 PM
  Number of letters in database: 1,870
  Number of sequences in database:  19



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40