BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: df8e8ffc9b493ed9647039bee19de5c4.SwissProt.fasta
14 sequences; 6,443 total letters
Query= ACIAD0395
Length=440
Score E
Sequences producing significant alignments: (Bits) Value
P07661 Citrate-proton symporter [Escherichia coli] 511 0.0
P0A2G4 Citrate-proton symporter [Salmonella typhi] 508 0.0
P0A2G3 Citrate-proton symporter [Salmonella typhimurium (strain L... 508 0.0
P16482 Citrate-proton symporter [Klebsiella pneumoniae] 488 5e-175
P0C0L8 Proline/betaine transporter [Escherichia coli O157:H7] 234 4e-75
P0C0L7 Proline/betaine transporter [Escherichia coli (strain K12)] 234 4e-75
P40862 Proline/betaine transporter [Salmonella typhimurium (strai... 231 9e-74
Q47421 Glycine betaine/proline/ectoine/pipecolic acid transporter... 226 5e-72
Q79VC4 Ectoine/proline transporter ProP [Corynebacterium glutamic... 218 1e-68
P0AEX4 Alpha-ketoglutarate permease [Shigella flexneri] 204 2e-64
P0AEX3 Alpha-ketoglutarate permease [Escherichia coli (strain K12)] 204 2e-64
P0DPR5 Fosfomycin resistance protein AbaF [Acinetobacter baumanni... 197 1e-61
Q5HRH0 Putative proline/betaine transporter [Staphylococcus epide... 192 1e-59
P76350 Shikimate transporter [Escherichia coli (strain K12)] 189 1e-58
>P07661 Citrate-proton symporter [Escherichia coli]
Length=431
Score = 511 bits (1315), Expect = 0.0
Identities = 249/417 (60%), Positives = 316/417 (76%), Gaps = 3/417 (1%)
Query 5 QQTSR---IRAIFNVTSGNFLEQYDFFLFGLYAKAIGETFFHSDSSYAALMKTFLVFAVS 61
QQ SR AI VTSGNFLEQ+DFFLFG YA I +TFF ++S +AALM TF VF
Sbjct 3 QQPSRAGTFGAILRVTSGNFLEQFDFFLFGFYATYIAKTFFPAESEFAALMLTFAVFGSG 62
Query 62 FLMRPIGALVLGPYVDRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFAGRL 121
FLMRPIGA+VLG Y+DRIGRRKGLM+TL+IM G+L+IAL PGY TIG A VL+ GRL
Sbjct 63 FLMRPIGAVVLGAYIDRIGRRKGLMITLAIMGCGTLLIALVPGYQTIGLLAPVLVLVGRL 122
Query 122 AQGFSAGVELGGVSVYLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTKAQV 181
QGFSAGVELGGVSVYLSEIA P N+GF TSWQSASQQVA++ AA +GY +++ ++
Sbjct 123 LQGFSAGVELGGVSVYLSEIATPGNKGFYTSWQSASQQVAIVVAALIGYGLNVTLGHDEI 182
Query 182 ADWAWRIPFFVGCAIIPFIFWLRKSLQETEAFASRKEHPTTQQIMSTLAANWKIVLTGMC 241
++W WRIPFF+GC IIP IF LR+SLQETEAF RK P T++I +T+A NW+I+ G
Sbjct 183 SEWGWRIPFFIGCMIIPLIFVLRRSLQETEAFLQRKHRPDTREIFTTIAKNWRIITAGTL 242
Query 242 MVATTTTMFYFITVYTPTYGKEVLHLTSAESLLATVMVGVSNFILLPIGGYLSDKFGRKP 301
+VA TTT FYFITVYTPTYG+ VL+L++ +SL+ T++VG+SNFI LPIGG +SD+ GR+P
Sbjct 243 LVAMTTTTFYFITVYTPTYGRTVLNLSARDSLVVTMLVGISNFIWLPIGGAISDRIGRRP 302
Query 302 LLITTTTLIFITAYPLLSWLTQNISLTHMLISLLWLSLLYSFYNGALVVSLTEMMPSSVR 361
+L+ T L +T P+++WLT T M + LLW S + YNGA+V +LTE+MP VR
Sbjct 303 VLMGITLLALVTTLPVMNWLTAAPDFTRMTLVLLWFSFFFGMYNGAMVAALTEVMPVYVR 362
Query 362 IAGFSVAYSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLIATLIVFRK 418
GFS+A+SLAT++FGGLTP I+T LV+ +G KS P +WLM AA+ L AT ++F +
Sbjct 363 TVGFSLAFSLATAIFGGLTPAISTALVQLTGDKSSPGWWLMCAALCGLAATTMLFAR 419
>P0A2G4 Citrate-proton symporter [Salmonella typhi]
Length=434
Score = 508 bits (1309), Expect = 0.0
Identities = 249/418 (60%), Positives = 313/418 (75%), Gaps = 3/418 (1%)
Query 2 EHGQQTSR---IRAIFNVTSGNFLEQYDFFLFGLYAKAIGETFFHSDSSYAALMKTFLVF 58
+H TSR AI VTSGNFLEQ+DFFLFG YA I TFF ++S +A+LM TF VF
Sbjct 3 QHTPATSRAGTFGAILRVTSGNFLEQFDFFLFGFYATYIARTFFPAESEFASLMLTFAVF 62
Query 59 AVSFLMRPIGALVLGPYVDRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFA 118
FLMRP+GA+VLG Y+DRIGRRKGLMVTL+IM G+L+IAL PGY TIG AA L+
Sbjct 63 GSGFLMRPVGAIVLGAYIDRIGRRKGLMVTLAIMGCGTLLIALVPGYQTIGLAAPALVLL 122
Query 119 GRLAQGFSAGVELGGVSVYLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTK 178
GRL QGFSAGVELGGVSVYLSEIA P N+GF TSWQSASQQVA++ AA +GY +++
Sbjct 123 GRLLQGFSAGVELGGVSVYLSEIATPGNKGFYTSWQSASQQVAIVVAALIGYSLNITLGH 182
Query 179 AQVADWAWRIPFFVGCAIIPFIFWLRKSLQETEAFASRKEHPTTQQIMSTLAANWKIVLT 238
+++W WRIPFF+GC IIP IF LR+SLQETEAF RK P T++I +T+A NW+I+
Sbjct 183 DAISEWGWRIPFFIGCMIIPLIFVLRRSLQETEAFLQRKHRPDTREIFATIAKNWRIITA 242
Query 239 GMCMVATTTTMFYFITVYTPTYGKEVLHLTSAESLLATVMVGVSNFILLPIGGYLSDKFG 298
G +VA TTT FYFITVYTPTYG+ VL+L++ +SL+ T++VGVSNFI LPIGG +SD+ G
Sbjct 243 GTLLVAMTTTTFYFITVYTPTYGRTVLNLSARDSLIVTMLVGVSNFIWLPIGGAISDRIG 302
Query 299 RKPLLITTTTLIFITAYPLLSWLTQNISLTHMLISLLWLSLLYSFYNGALVVSLTEMMPS 358
R+ +L+ T L IT +P++ WLT T M + LLW S + YNGA+V +LTE+MP
Sbjct 303 RRAVLMGITLLALITTWPVMQWLTAAPDFTRMTLVLLWFSFFFGMYNGAMVAALTEVMPV 362
Query 359 SVRIAGFSVAYSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLIATLIVF 416
VR GFS+A+SLAT++FGGLTP I+T LV+ +G KS P +WLM AA+ L AT ++F
Sbjct 363 YVRTVGFSLAFSLATAIFGGLTPAISTALVKLTGDKSSPGWWLMCAALCGLAATAMLF 420
>P0A2G3 Citrate-proton symporter [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=434
Score = 508 bits (1309), Expect = 0.0
Identities = 249/418 (60%), Positives = 313/418 (75%), Gaps = 3/418 (1%)
Query 2 EHGQQTSR---IRAIFNVTSGNFLEQYDFFLFGLYAKAIGETFFHSDSSYAALMKTFLVF 58
+H TSR AI VTSGNFLEQ+DFFLFG YA I TFF ++S +A+LM TF VF
Sbjct 3 QHTPATSRAGTFGAILRVTSGNFLEQFDFFLFGFYATYIARTFFPAESEFASLMLTFAVF 62
Query 59 AVSFLMRPIGALVLGPYVDRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFA 118
FLMRP+GA+VLG Y+DRIGRRKGLMVTL+IM G+L+IAL PGY TIG AA L+
Sbjct 63 GSGFLMRPVGAIVLGAYIDRIGRRKGLMVTLAIMGCGTLLIALVPGYQTIGLAAPALVLL 122
Query 119 GRLAQGFSAGVELGGVSVYLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTK 178
GRL QGFSAGVELGGVSVYLSEIA P N+GF TSWQSASQQVA++ AA +GY +++
Sbjct 123 GRLLQGFSAGVELGGVSVYLSEIATPGNKGFYTSWQSASQQVAIVVAALIGYSLNITLGH 182
Query 179 AQVADWAWRIPFFVGCAIIPFIFWLRKSLQETEAFASRKEHPTTQQIMSTLAANWKIVLT 238
+++W WRIPFF+GC IIP IF LR+SLQETEAF RK P T++I +T+A NW+I+
Sbjct 183 DAISEWGWRIPFFIGCMIIPLIFVLRRSLQETEAFLQRKHRPDTREIFATIAKNWRIITA 242
Query 239 GMCMVATTTTMFYFITVYTPTYGKEVLHLTSAESLLATVMVGVSNFILLPIGGYLSDKFG 298
G +VA TTT FYFITVYTPTYG+ VL+L++ +SL+ T++VGVSNFI LPIGG +SD+ G
Sbjct 243 GTLLVAMTTTTFYFITVYTPTYGRTVLNLSARDSLIVTMLVGVSNFIWLPIGGAISDRIG 302
Query 299 RKPLLITTTTLIFITAYPLLSWLTQNISLTHMLISLLWLSLLYSFYNGALVVSLTEMMPS 358
R+ +L+ T L IT +P++ WLT T M + LLW S + YNGA+V +LTE+MP
Sbjct 303 RRAVLMGITLLALITTWPVMQWLTAAPDFTRMTLVLLWFSFFFGMYNGAMVAALTEVMPV 362
Query 359 SVRIAGFSVAYSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLIATLIVF 416
VR GFS+A+SLAT++FGGLTP I+T LV+ +G KS P +WLM AA+ L AT ++F
Sbjct 363 YVRTVGFSLAFSLATAIFGGLTPAISTALVKLTGDKSSPGWWLMCAALCGLAATAMLF 420
>P16482 Citrate-proton symporter [Klebsiella pneumoniae]
Length=444
Score = 488 bits (1257), Expect = 5e-175
Identities = 234/411 (57%), Positives = 306/411 (74%), Gaps = 0/411 (0%)
Query 8 SRIRAIFNVTSGNFLEQYDFFLFGLYAKAIGETFFHSDSSYAALMKTFLVFAVSFLMRPI 67
+RI AI VTSGNFLEQ+DFFLFG YA I TFF + S +A+LM TF VF FLMRPI
Sbjct 25 ARIGAILRVTSGNFLEQFDFFLFGFYATYIAHTFFPASSEFASLMMTFAVFGAGFLMRPI 84
Query 68 GALVLGPYVDRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFAGRLAQGFSA 127
GA+VLG Y+D++GRRKGL+VTLSIMA G+ +I L P Y TIG A +L+ GRL QGFSA
Sbjct 85 GAIVLGAYIDKVGRRKGLIVTLSIMATGTFLIVLIPSYQTIGLWAPLLVLIGRLLQGFSA 144
Query 128 GVELGGVSVYLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTKAQVADWAWR 187
G ELGGVSVYL+EIA P +GF TSWQS SQQVA++ AA +G+ ++ V + ++DW WR
Sbjct 145 GAELGGVSVYLAEIATPGRKGFYTSWQSGSQQVAIMVAAAMGFALNAVLEPSAISDWGWR 204
Query 188 IPFFVGCAIIPFIFWLRKSLQETEAFASRKEHPTTQQIMSTLAANWKIVLTGMCMVATTT 247
IPF G I+PFIF LR+ L+ET+ F +R+ H +Q+ +TL ANW++V+ GM MVA TT
Sbjct 205 IPFLFGVLIVPFIFILRRKLEETQEFTARRHHLAMRQVFATLLANWQVVIAGMMMVAMTT 264
Query 248 TMFYFITVYTPTYGKEVLHLTSAESLLATVMVGVSNFILLPIGGYLSDKFGRKPLLITTT 307
T FY ITVY PT+GK+VL L++++SLL T++V +SNF LP+GG LSD+FGR+ +LI T
Sbjct 265 TAFYLITVYAPTFGKKVLMLSASDSLLVTLLVAISNFFWLPVGGALSDRFGRRSVLIAMT 324
Query 308 TLIFITAYPLLSWLTQNISLTHMLISLLWLSLLYSFYNGALVVSLTEMMPSSVRIAGFSV 367
L TA+P L+ L S ML LLWLS +Y YNGA++ +LTE+MP+ VR+AGFS+
Sbjct 325 LLALATAWPALTMLANAPSFLMMLSVLLWLSFIYGMYNGAMIPALTEIMPAEVRVAGFSL 384
Query 368 AYSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLIATLIVFRK 418
AYSLAT+VFGG TP+I+T L+E +G K+ P +W+ AAI L+AT ++R+
Sbjct 385 AYSLATAVFGGFTPVISTALIEYTGDKASPGYWMSFAAICGLLATCYLYRR 435
>P0C0L8 Proline/betaine transporter [Escherichia coli O157:H7]
Length=500
Score = 234 bits (597), Expect = 4e-75
Identities = 126/412 (31%), Positives = 216/412 (52%), Gaps = 15/412 (4%)
Query 11 RAIFNVTSGNFLEQYDFFLFGLYAKAIGETFFHSDSSYAALMKTFLVFAVSFLMRPIGAL 70
+AI + GN +E +DF ++G A A+G+ FF ++ F+V FL+RP+G L
Sbjct 25 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLGGL 84
Query 71 VLGPYVDRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFAGRLAQGFSAGVE 130
G D+ GR+K L +T+ IM++ + I L P Y TIG A +L+ ++AQGFS G E
Sbjct 85 FFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQGFSVGGE 144
Query 131 LGGVSVYLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTKAQVADWAWRIPF 190
G S++++E + RGF+ SW + A + +IS + +A DW WRIPF
Sbjct 145 YTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPF 204
Query 191 FVGCAIIPFIFWLRKSLQETEAFASR------------KEHPTTQQIMSTLAANWKIVLT 238
F+ + +LR +L+ET AF ++ P W+ +LT
Sbjct 205 FIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKV-SFKEIATKYWRSLLT 263
Query 239 GMCMVATTTTMFYFITVYTPTYGKEVLHLTSAESLLATVMVGVSNFILLPIGGYLSDKFG 298
+ +V T +Y + Y P+Y LH + +L + + + + P+ G LSD+FG
Sbjct 264 CIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFG 323
Query 299 RKPLLITTTTLIFITAYPLLSWLTQNISLTHMLISLLWLSLLYSFYNGALVVSLTEMMPS 358
R+P ++ + +F+ A P + N+ + + LL L+++ + + G + +L M P+
Sbjct 324 RRPFVLLGSVALFVLAIPAFILINSNV-IGLIFAGLLMLAVILNCFTGVMASTLPAMFPT 382
Query 359 SVRIAGFSVAYSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLI 410
+R + + A++++ V GLTP +A +LVE S + MPA++LM+ A++ LI
Sbjct 383 HIRYSALAAAFNISVLV-AGLTPTLAAWLVESSQNLMMPAYYLMVVAVVGLI 433
>P0C0L7 Proline/betaine transporter [Escherichia coli (strain
K12)]
Length=500
Score = 234 bits (597), Expect = 4e-75
Identities = 126/412 (31%), Positives = 216/412 (52%), Gaps = 15/412 (4%)
Query 11 RAIFNVTSGNFLEQYDFFLFGLYAKAIGETFFHSDSSYAALMKTFLVFAVSFLMRPIGAL 70
+AI + GN +E +DF ++G A A+G+ FF ++ F+V FL+RP+G L
Sbjct 25 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLGGL 84
Query 71 VLGPYVDRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFAGRLAQGFSAGVE 130
G D+ GR+K L +T+ IM++ + I L P Y TIG A +L+ ++AQGFS G E
Sbjct 85 FFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQGFSVGGE 144
Query 131 LGGVSVYLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTKAQVADWAWRIPF 190
G S++++E + RGF+ SW + A + +IS + +A DW WRIPF
Sbjct 145 YTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPF 204
Query 191 FVGCAIIPFIFWLRKSLQETEAFASR------------KEHPTTQQIMSTLAANWKIVLT 238
F+ + +LR +L+ET AF ++ P W+ +LT
Sbjct 205 FIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKV-SFKEIATKYWRSLLT 263
Query 239 GMCMVATTTTMFYFITVYTPTYGKEVLHLTSAESLLATVMVGVSNFILLPIGGYLSDKFG 298
+ +V T +Y + Y P+Y LH + +L + + + + P+ G LSD+FG
Sbjct 264 CIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFG 323
Query 299 RKPLLITTTTLIFITAYPLLSWLTQNISLTHMLISLLWLSLLYSFYNGALVVSLTEMMPS 358
R+P ++ + +F+ A P + N+ + + LL L+++ + + G + +L M P+
Sbjct 324 RRPFVLLGSVALFVLAIPAFILINSNV-IGLIFAGLLMLAVILNCFTGVMASTLPAMFPT 382
Query 359 SVRIAGFSVAYSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLI 410
+R + + A++++ V GLTP +A +LVE S + MPA++LM+ A++ LI
Sbjct 383 HIRYSALAAAFNISVLV-AGLTPTLAAWLVESSQNLMMPAYYLMVVAVVGLI 433
>P40862 Proline/betaine transporter [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=500
Score = 231 bits (588), Expect = 9e-74
Identities = 125/412 (30%), Positives = 215/412 (52%), Gaps = 15/412 (4%)
Query 11 RAIFNVTSGNFLEQYDFFLFGLYAKAIGETFFHSDSSYAALMKTFLVFAVSFLMRPIGAL 70
+AI + GN +E +DF ++G A A+G+ FF ++ F+V FL+RP+G L
Sbjct 25 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGL 84
Query 71 VLGPYVDRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFAGRLAQGFSAGVE 130
G D+ GR+K L +T+ IM++ + I L P YATIG A +L+ ++AQGFS G E
Sbjct 85 FFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGE 144
Query 131 LGGVSVYLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTKAQVADWAWRIPF 190
G S++++E + RGF+ SW + A + +IS + + +W WRIPF
Sbjct 145 YTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEENFLEWGWRIPF 204
Query 191 FVGCAIIPFIFWLRKSLQETEAFASR------------KEHPTTQQIMSTLAANWKIVLT 238
F+ + +LR +L+ET AF ++ P +W+ +L+
Sbjct 205 FIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKV-SFKEIATKHWRSLLS 263
Query 239 GMCMVATTTTMFYFITVYTPTYGKEVLHLTSAESLLATVMVGVSNFILLPIGGYLSDKFG 298
+ +V T +Y + Y P+Y LH + +L + + + + P+ G LSD+FG
Sbjct 264 CIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFG 323
Query 299 RKPLLITTTTLIFITAYPLLSWLTQNISLTHMLISLLWLSLLYSFYNGALVVSLTEMMPS 358
R+P +I + +F A P + N+ + + LL L+++ + + G + +L M P+
Sbjct 324 RRPFVIMGSIALFALAIPAFILINSNV-IGLIFAGLLMLAVILNCFTGVMASTLPAMFPT 382
Query 359 SVRIAGFSVAYSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLI 410
+R + + A++++ + GLTP +A +LVE S MPA++LM+ A+I LI
Sbjct 383 HIRYSALAAAFNISV-LIAGLTPTLAAWLVESSQDLMMPAYYLMVIAVIGLI 433
>Q47421 Glycine betaine/proline/ectoine/pipecolic acid transporter
OusA [Dickeya dadantii (strain 3937)]
Length=501
Score = 226 bits (576), Expect = 5e-72
Identities = 134/442 (30%), Positives = 226/442 (51%), Gaps = 23/442 (5%)
Query 11 RAIFNVTSGNFLEQYDFFLFGLYAKAIGETFFHSDSSYAALMKTFLVFAVSFLMRPIGAL 70
+AI GN +E +DF ++G A A+G+ FF ++ F+V FL+RP+G +
Sbjct 26 KAITAAALGNAMEWFDFGVYGFVAYALGQVFFPGADPGVQMIAALATFSVPFLIRPLGGV 85
Query 71 VLGPYVDRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFAGRLAQGFSAGVE 130
G D+ GR+K L +T+ IM++ + I L P Y IG A +L+ ++AQGFS G E
Sbjct 86 FFGALGDKYGRQKILAITIIIMSISTFCIGLIPSYERIGIWAPILLLLAKMAQGFSVGGE 145
Query 131 LGGVSVYLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTKAQVADWAWRIPF 190
G S++++E + RGF+ SW + A + +IS + + W WR+PF
Sbjct 146 YTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTLIGEQAFLAWGWRLPF 205
Query 191 FVGCAIIPFIFWLRKSLQETEAFASRKEHPTTQQIMSTLAA------------NWKIVLT 238
F+ + +LR +L+ET AF E Q L A +WK +L
Sbjct 206 FLALPLGLIGLYLRHALEETPAFRQHVE-KLEQNDRDGLKAGPGVSFREIATHHWKSLLV 264
Query 239 GMCMVATTTTMFYFITVYTPTYGKEVLHLTSAESLLATVMVGVSNFILLPIGGYLSDKFG 298
+ +V T +Y + Y P+Y LH + +L + + + + P+ G LSD+FG
Sbjct 265 CIGLVIATNVTYYMLLTYMPSYLSHSLHYSENHGVLIIIAIMIGMLFVQPVMGLLSDRFG 324
Query 299 RKPLLITTTTLIFITAYPLLSWLTQNISLTHMLISLLWLSLLYSFYNGALVVSLTEMMPS 358
RKP ++ + +F A P + +I + + + LL L+++ + + G + +L + P+
Sbjct 325 RKPFVVIGSVAMFFLAVPSFMLINSDI-IGLIFLGLLMLAVILNAFTGVMASTLPALFPT 383
Query 359 SVRIAGFSVAYSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLIATLIVFRK 418
+R + + A++++ + GLTP +A +LVE S + MPA++LM+ A+I L+ L F K
Sbjct 384 HIRYSALASAFNISV-LIAGLTPTVAAWLVESSQNLYMPAYYLMVIAVIGLLTGL--FMK 440
Query 419 RQHNTAQSKPLQ--TKLASSVS 438
N KPL+ T AS +S
Sbjct 441 ETAN----KPLKGATPAASDLS 458
>Q79VC4 Ectoine/proline transporter ProP [Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318
/ LMG 3730 / NCIMB 10025)]
Length=504
Score = 218 bits (554), Expect = 1e-68
Identities = 136/439 (31%), Positives = 225/439 (51%), Gaps = 20/439 (5%)
Query 12 AIFNVTSGNFLEQYDFFLFGLYAKAIGETFFHSDSSYAALMKTFLVFAVSFLMRPIGALV 71
AI GNF+E YDF ++G + F L+ FAVS+L+RP+G LV
Sbjct 32 AIKGTVVGNFMEWYDFGIYGYLTVTMTAVFTQGLPQEWQLLAVMFGFAVSYLVRPLGGLV 91
Query 72 LGPYVDRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFAGRLAQGFSAGVEL 131
LGP D++GR+K L VT+++MAV + +I L P A+IG A VL++ ++ QGFS G E
Sbjct 92 LGPLGDKVGRQKVLYVTMAMMAVSTALIGLLPTAASIGAWALVLLYLLKMVQGFSTGGEY 151
Query 132 GGVSVYLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFT----KAQVADWAWR 187
G + Y++E A RGF ++ + A++ + + V T + D+ WR
Sbjct 152 AGATTYVAEFAPDRRRGFFGAFLDMGSYLGFAAGASVVAITTWVTTHFYGATAMEDFGWR 211
Query 188 IPFFVGCAIIPFIFWLRKSLQETEAFASRKEHPTT------------QQIMSTLAANWKI 235
IPF + +LR + ET AF + ++ P + + +W+
Sbjct 212 IPFLTAIPLGIIAVYLRTRIPETPAFENNQDEPNAVVEKDTEDPYARLGLAGVIRHHWRP 271
Query 236 VLTGMCMVATTTTMFYFITVYTPTYGKEVLHLTSAESLLATVMVGVSNFILLPIGGYLSD 295
+L G+ +VA T T Y +T Y P Y +E + L SA + TV + V +LLP G SD
Sbjct 272 LLIGIAIVAATNTAGYALTSYMPVYLEEQIGLHSASAAAVTVPILVVMSLLLPFVGMWSD 331
Query 296 KFGRKPLLITTTTLIFITAYPLLSWLTQNI-SLTHMLISLLWLSLLYSFYNGALVVSLTE 354
+ GRKP+ T I P ++L N ++ +LI+L +++ Y +L
Sbjct 332 RVGRKPVYATAVAATLILMVP--AFLIMNTGTIGAVLIALSMVAIPTGLYVALSASALPA 389
Query 355 MMPSSVRIAGFSVAYSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLIATLI 414
+ P++ R +G ++Y+++ S+FGG TP+I +L++++G +PA ++M + I+ +A L
Sbjct 390 LFPTASRFSGMGISYNISVSLFGGTTPLITQFLLQKTGLDIVPALYIMFFSAIAGVALLF 449
Query 415 VFRKRQHNTAQSKP-LQTK 432
+ Q S P ++TK
Sbjct 450 MTESSQKPLLGSFPTVETK 468
>P0AEX4 Alpha-ketoglutarate permease [Shigella flexneri]
Length=432
Score = 204 bits (520), Expect = 2e-64
Identities = 132/419 (32%), Positives = 213/419 (51%), Gaps = 21/419 (5%)
Query 9 RIRAIFNVTSGNFLEQYDFFLFGLYAKAIGETFFHSDSSYAALMKTFLVFAVSFLMRPIG 68
RI AI +SGN +E +DF+++ + FF S ++ L++T VFA FLMRPIG
Sbjct 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIG 79
Query 69 ALVLGPYVDRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFAGRLAQGFSAG 128
+ G D+ GR+K +++++ +M GSL+IA PGY TIG A L+ RL QG S G
Sbjct 80 GWLFGRIADKHGRKKSMLLSVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVG 139
Query 129 VELGGVSVYLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTKAQVADWAWRI 188
E G + Y+SE+A +GF S+Q + + A + ++ A + +W WRI
Sbjct 140 GEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRI 199
Query 189 PFFVGCAIIPFIFWLRKSLQETEAFASR--KEHPTTQQIMSTLAANWKIVLTGMCMVATT 246
PF +G + WLR+ L ET +R KE + + L N + + + A
Sbjct 200 PFALGAVLAVVALWLRRQLDETSQQETRALKEAGS----LKGLWRNRRAFIMVLGFTAAG 255
Query 247 TTMFYFITVYTPTYGKEVLHLTSAESLLATVMVGVSN------FILLPIGGYLSDKFGRK 300
+ FY T Y Y L + + A V G+ ++ P+ G LSDK GR+
Sbjct 256 SLCFYTFTTYMQKY------LVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR 309
Query 301 PLLITTTTLIFITAYPLLSWLTQNISLTHMLISLLWLSLL-YSFYNGALVVSLTEMMPSS 359
++ +L I P+LS L QN+S + L+ +LL SFY + EM P+
Sbjct 310 TSMLCFGSLAAIFTVPILSAL-QNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQ 368
Query 360 VRIAGFSVAYSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLIATLIVFRK 418
VR G ++Y++A ++FGG +A L + G ++ +++ L A+++ + +L++ RK
Sbjct 369 VRALGVGLSYAVANAIFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLMLHRK 426
>P0AEX3 Alpha-ketoglutarate permease [Escherichia coli (strain
K12)]
Length=432
Score = 204 bits (520), Expect = 2e-64
Identities = 132/419 (32%), Positives = 213/419 (51%), Gaps = 21/419 (5%)
Query 9 RIRAIFNVTSGNFLEQYDFFLFGLYAKAIGETFFHSDSSYAALMKTFLVFAVSFLMRPIG 68
RI AI +SGN +E +DF+++ + FF S ++ L++T VFA FLMRPIG
Sbjct 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIG 79
Query 69 ALVLGPYVDRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFAGRLAQGFSAG 128
+ G D+ GR+K +++++ +M GSL+IA PGY TIG A L+ RL QG S G
Sbjct 80 GWLFGRIADKHGRKKSMLLSVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVG 139
Query 129 VELGGVSVYLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTKAQVADWAWRI 188
E G + Y+SE+A +GF S+Q + + A + ++ A + +W WRI
Sbjct 140 GEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRI 199
Query 189 PFFVGCAIIPFIFWLRKSLQETEAFASR--KEHPTTQQIMSTLAANWKIVLTGMCMVATT 246
PF +G + WLR+ L ET +R KE + + L N + + + A
Sbjct 200 PFALGAVLAVVALWLRRQLDETSQQETRALKEAGS----LKGLWRNRRAFIMVLGFTAAG 255
Query 247 TTMFYFITVYTPTYGKEVLHLTSAESLLATVMVGVSN------FILLPIGGYLSDKFGRK 300
+ FY T Y Y L + + A V G+ ++ P+ G LSDK GR+
Sbjct 256 SLCFYTFTTYMQKY------LVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR 309
Query 301 PLLITTTTLIFITAYPLLSWLTQNISLTHMLISLLWLSLL-YSFYNGALVVSLTEMMPSS 359
++ +L I P+LS L QN+S + L+ +LL SFY + EM P+
Sbjct 310 TSMLCFGSLAAIFTVPILSAL-QNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQ 368
Query 360 VRIAGFSVAYSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLIATLIVFRK 418
VR G ++Y++A ++FGG +A L + G ++ +++ L A+++ + +L++ RK
Sbjct 369 VRALGVGLSYAVANAIFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLMLHRK 426
>P0DPR5 Fosfomycin resistance protein AbaF [Acinetobacter baumannii
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755
/ 5377)]
Length=429
Score = 197 bits (501), Expect = 1e-61
Identities = 118/407 (29%), Positives = 212/407 (52%), Gaps = 14/407 (3%)
Query 19 GNFLEQYDFFLFGLYAKAI-GETFFH-SDSSYAALMKTFLVFAVSFLMRPIGALVLGPYV 76
G+ E Y+FFL+G + + GE FF + ++ ++ F ++AV FL RP+G LV G Y
Sbjct 15 GSVAEWYEFFLYGTASALVFGELFFQQTGNAIDGILAAFALYAVGFLARPLGGLVFGHYG 74
Query 77 DRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFAGRLAQGFSAGVELGGVSV 136
D+IGR+K L ++L I+ + + ++ P + IG+ A L+ RL QGF+ G E GG +
Sbjct 75 DKIGRKKLLQISLIIVGITTFLMGCIPTFHQIGYWAPTLLVILRLIQGFAFGGEWGGAVI 134
Query 137 YLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTKAQVADWAWRIPFFVGCAI 196
+SE + RG+ SW + + A + ++S + Q DW WR F+ +
Sbjct 135 LVSEHSPDDRRGYWASWPQTGVPLGNLVATLVLLLLSKNLSPEQFLDWGWRCAFWFSAVV 194
Query 197 IPFIFWLRKSLQETEAF--ASRKEHPTTQQ---IMSTLAANWKIVLTGMCMVATTTTMFY 251
+ W+RK++ + E F A K+ +Q I+ L + K V+ G+ ++Y
Sbjct 195 VLIGLWIRKNVDDAEVFKEAQAKQQLLEKQQLGIIEVLKYHKKSVIAGIGARFAENILYY 254
Query 252 FITVYTPTYGKEVLHLTSAESLLATVMVGVSNFILLPIGGYLSDKFGRKPLLI---TTTT 308
+ ++ +Y K V+H +++ LL + +F ++P G+LSD FGRKP+ + T
Sbjct 255 MVVTFSISYLKLVVHKDTSQILLLMFGAHLIHFFIIPFMGHLSDIFGRKPIYLIGAVLTA 314
Query 309 LIFITAYPLLSWLTQNISLTHMLISLLWLSLLYSFYNGALVVSLTEMMPSSVRIAGFSVA 368
+PL+ + + +++ L S+ YS Y+ +TE+ P+ +R S
Sbjct 315 FWGFVGFPLMDTGNDWLIMLAIVLGLFIESMTYSPYSAL----MTELFPTHIRYTALSFC 370
Query 369 YSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLIATLIV 415
Y +A + G L P+IA L+++ S + +L+ A++IS+++ L+V
Sbjct 371 YQVAPIMAGSLAPLIALTLLKEFNSSIPISLYLVAASLISIVSILLV 417
>Q5HRH0 Putative proline/betaine transporter [Staphylococcus epidermidis
(strain ATCC 35984 / RP62A)]
Length=464
Score = 192 bits (489), Expect = 1e-59
Identities = 124/422 (29%), Positives = 213/422 (50%), Gaps = 19/422 (5%)
Query 19 GNFLEQYDFFLFGLYAKAIGETFFHS-DSSYAALMKTFLVFAVSFLMRPIGALVLGPYVD 77
GN +E +DF L+ A I + FF D+ L+ TF FA++FL+RPIG +V G D
Sbjct 17 GNAMEWFDFGLYSYLAVIISKNFFSQVDNDQLKLVFTFATFAIAFLLRPIGGIVFGIIGD 76
Query 78 RIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFAGRLAQGFSAGVELGGVSVY 137
+ GR+ L T+ +MA +L+I + P Y IG A +L+ R+ QGFS G E G VY
Sbjct 77 KYGRKIVLTTTIILMAFSTLLIGVLPTYNEIGVWAPILLLLARVLQGFSTGGEYAGAMVY 136
Query 138 LSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTKAQVADWAWRIPFFVGCAII 197
++E + R + I A+ L + +++ T+ Q+ W WRIPF +G +
Sbjct 137 VAESSPDRKRNSLGCGLEIGTLSGYIAASILVFALNISLTETQLNSWGWRIPFLLGMFLG 196
Query 198 PFIFWLRKSLQETEAFASR----KEHPTTQQI--MSTLAANWKIVLTGMCMVATTTTMFY 251
F +LR+ L+E+ + + ++HPT + I + + +K ++ VA Y
Sbjct 197 LFGLYLRRKLEESPIYENEQRELQKHPTREPIGVFTLIRFYYKDIIVCFVAVAFFNVTNY 256
Query 252 FITVYTPTYGKEVLHLTSAESLLATVMVGVSNFILLPIG---GYLSDKFGRKPLLITTTT 308
+T Y P+Y + V+ L + ++M+ I++P+ G ++D+ G K + +
Sbjct 257 MVTAYLPSYLEGVIKLNGTTT---SIMITCIMVIMIPLALMFGRIADRIGEKKVFLIGLG 313
Query 309 LIFITAYPLLSWLTQNISLTHMLISLLWLSLLYSFYNGALVVSLTEMMPSSVRIAGFSVA 368
+ + + S L Q SL + I +L L S Y + SL M + VR ++
Sbjct 314 GLILLSVVAFS-LMQLQSLFFVSIGVLILGFFLSTYEATMPGSLPTMFYTHVRYRALAIT 372
Query 369 YSLATSVFGGLTPMIATYLVEQSGSKSMPAFWLMLAAIISLIATLIVFRKRQHNTAQSKP 428
++++ S+ GG TP+IA+YLV + + PA++L + +II I ++ H + SK
Sbjct 373 FNVSVSLLGGTTPLIASYLVSTTNNPLTPAYYLTVISIIGFIVIALL-----HKSTASKS 427
Query 429 LQ 430
L+
Sbjct 428 LK 429
>P76350 Shikimate transporter [Escherichia coli (strain K12)]
Length=438
Score = 189 bits (481), Expect = 1e-58
Identities = 115/415 (28%), Positives = 204/415 (49%), Gaps = 14/415 (3%)
Query 11 RAIFNVTSGNFLEQYDFFLFGLYAKAI-GETFFHSDSSYAALMKTFLVFAVSFLMRPIGA 69
RA +G ++ YDF L+G+ A + FF S + F F V FL RP+G
Sbjct 22 RAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGG 81
Query 70 LVLGPYVDRIGRRKGLMVTLSIMAVGSLIIALTPGYATIGFAATVLIFAGRLAQGFSAGV 129
++ G + DR+GR++ LM+T+ +M + + +I + P ++TIG+ A +L+ R QGF+ G
Sbjct 82 VIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTIGWWAPILLVTLRAIQGFAVGG 141
Query 130 ELGGVSVYLSEIAEPHNRGFITSWQSASQQVAVIFAATLGYMISLVFTKAQVADWAWRIP 189
E GG ++ E A + + F +S V ++ + L +IS++ T Q W WRIP
Sbjct 142 EWGGAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIP 201
Query 190 FFVGCAIIPFIFWLRKSLQETEAF--------ASRKEHPTTQQIMSTLAANWKIVLTGMC 241
F ++ W+R ++E+ F A++K P + ++ A KI+ +C
Sbjct 202 FLFSIVLVLGALWVRNGMEESAEFEQQQHYQAAAKKRIPVIEALLRHPGAFLKIIALRLC 261
Query 242 MVATTTTMFYFITVYTPTYGKEVLHLTSAESLLATVMVGVSNFILLPIGGYLSDKFGRKP 301
+ T Y +T + Y + + L L ++VG + + +P +L+D+FGR+
Sbjct 262 ELLT----MYIVTAFALNYSTQNMGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRR 317
Query 302 LLITTTTLIFITAYPLLSWLTQNISLTHMLISLLWLSLLYSFYNGALVVSLTEMMPSSVR 361
+ IT T + ++A+P L + S++ ++ + TEM +S R
Sbjct 318 VYITGTLIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYR 377
Query 362 IAGFSVAYSLATSVFGGLTPMIATYLVEQ-SGSKSMPAFWLMLAAIISLIATLIV 415
+G V Y +A+ V GG TP IA L+ +G+ A +L+ +IS + L++
Sbjct 378 YSGAGVGYQVASVVGGGFTPFIAAALITYFAGNWHSVAIYLLAGCLISAMTALLM 432
Lambda K H a alpha
0.327 0.137 0.408 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2228581
Database: df8e8ffc9b493ed9647039bee19de5c4.SwissProt.fasta
Posted date: May 8, 2024 11:52 PM
Number of letters in database: 6,443
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
