BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 5b95da4dd6faa4c653e4ec2b8c6d1eb0.SwissProt.fasta
13 sequences; 2,129 total letters
Query= ACIAD0405
Length=108
Score E
Sequences producing significant alignments: (Bits) Value
Q1I491 Chaperone modulatory protein CbpM [Pseudomonas entomophila... 43.5 2e-10
Q83CJ1 Chaperone modulatory protein CbpM [Coxiella burnetii (stra... 42.7 4e-10
A9NDK7 Chaperone modulatory protein CbpM [Coxiella burnetii (stra... 42.7 4e-10
A9KE66 Chaperone modulatory protein CbpM [Coxiella burnetii (stra... 42.7 4e-10
B6IZY6 Chaperone modulatory protein CbpM [Coxiella burnetii (stra... 42.7 4e-10
B6J7F6 Chaperone modulatory protein CbpM [Coxiella burnetii (stra... 42.7 4e-10
B1J5W6 Chaperone modulatory protein CbpM [Pseudomonas putida (str... 40.8 2e-09
B0KK25 Chaperone modulatory protein CbpM [Pseudomonas putida (str... 37.7 3e-08
Q88DH8 Chaperone modulatory protein CbpM [Pseudomonas putida (str... 35.4 2e-07
A5W9N5 Chaperone modulatory protein CbpM [Pseudomonas putida (str... 35.4 2e-07
Q76IQ3 Tyrosine 3-monooxygenase [Canis lupus familiaris] 32.3 6e-06
P24529 Tyrosine 3-monooxygenase [Mus musculus] 32.3 6e-06
>Q1I491 Chaperone modulatory protein CbpM [Pseudomonas entomophila
(strain L48)]
Length=101
Score = 43.5 bits (101), Expect = 2e-10
Identities = 25/77 (32%), Positives = 40/77 (52%), Gaps = 2/77 (3%)
Query 26 LSLTHFAQVCGQSPDWVLQLIEYDIL--SATHPHQHQFLSEDVSRARRAYRLQRDFDASL 83
L + Q S DWV++++E+ I+ S P + F +RA +L ++ +
Sbjct 9 LDMRTLCQEADVSADWVIEIVEHGIVEPSGRTPEEWVFDDRAPVTLKRAVKLHQELELEW 68
Query 84 PAVALMLDLLDEVHQLR 100
VAL L+LL+EV QLR
Sbjct 69 EGVALALELLEEVQQLR 85
>Q83CJ1 Chaperone modulatory protein CbpM [Coxiella burnetii (strain
RSA 493 / Nine Mile phase I)]
Length=106
Score = 42.7 bits (99), Expect = 4e-10
Identities = 21/90 (23%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query 19 ILDEQRGLSLTHFAQVCGQSPDWVLQLIEYDILS--ATHPHQHQFLSEDVSRARRAYRLQ 76
I++ L + +Q + +++++E+ ++ + P +F + + RA+ A
Sbjct 10 IIERSSPLKIDELSQAVHLRREIIIEMVEHRLIEPEGSSPTSWKFDNVCLKRAKIAASFY 69
Query 77 RDFDASLPAVALMLDLLDEVHQLRRKVRHL 106
RD + ++P +A+ LDLLD++ L +++R L
Sbjct 70 RDLEINMPGIAIALDLLDKIEHLEQRLRTL 99
>A9NDK7 Chaperone modulatory protein CbpM [Coxiella burnetii (strain
RSA 331 / Henzerling II)]
Length=106
Score = 42.7 bits (99), Expect = 4e-10
Identities = 21/90 (23%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query 19 ILDEQRGLSLTHFAQVCGQSPDWVLQLIEYDILS--ATHPHQHQFLSEDVSRARRAYRLQ 76
I++ L + +Q + +++++E+ ++ + P +F + + RA+ A
Sbjct 10 IIERSSPLKIDELSQAVHLRREIIIEMVEHRLIEPEGSSPTSWKFDNVCLKRAKIAASFY 69
Query 77 RDFDASLPAVALMLDLLDEVHQLRRKVRHL 106
RD + ++P +A+ LDLLD++ L +++R L
Sbjct 70 RDLEINMPGIAIALDLLDKIEHLEQRLRTL 99
>A9KE66 Chaperone modulatory protein CbpM [Coxiella burnetii (strain
Dugway 5J108-111)]
Length=106
Score = 42.7 bits (99), Expect = 4e-10
Identities = 21/90 (23%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query 19 ILDEQRGLSLTHFAQVCGQSPDWVLQLIEYDILS--ATHPHQHQFLSEDVSRARRAYRLQ 76
I++ L + +Q + +++++E+ ++ + P +F + + RA+ A
Sbjct 10 IIERSSPLKIDELSQAVHLRREIIIEMVEHRLIEPEGSSPTSWKFDNVCLKRAKIAASFY 69
Query 77 RDFDASLPAVALMLDLLDEVHQLRRKVRHL 106
RD + ++P +A+ LDLLD++ L +++R L
Sbjct 70 RDLEINMPGIAIALDLLDKIEHLEQRLRTL 99
>B6IZY6 Chaperone modulatory protein CbpM [Coxiella burnetii (strain
CbuG_Q212)]
Length=106
Score = 42.7 bits (99), Expect = 4e-10
Identities = 21/90 (23%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query 19 ILDEQRGLSLTHFAQVCGQSPDWVLQLIEYDILS--ATHPHQHQFLSEDVSRARRAYRLQ 76
I++ L + +Q + +++++E+ ++ + P +F + + RA+ A
Sbjct 10 IIERSSPLKIDELSQAVHLRREIIIEMVEHRLIEPEGSSPTSWKFDNVCLKRAKIAASFY 69
Query 77 RDFDASLPAVALMLDLLDEVHQLRRKVRHL 106
RD + ++P +A+ LDLLD++ L +++R L
Sbjct 70 RDLEINMPGIAIALDLLDKIEHLEQRLRTL 99
>B6J7F6 Chaperone modulatory protein CbpM [Coxiella burnetii (strain
CbuK_Q154)]
Length=106
Score = 42.7 bits (99), Expect = 4e-10
Identities = 21/90 (23%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query 19 ILDEQRGLSLTHFAQVCGQSPDWVLQLIEYDILS--ATHPHQHQFLSEDVSRARRAYRLQ 76
I++ L + +Q + +++++E+ ++ + P +F + + RA+ A
Sbjct 10 IIERSSPLKIDELSQAVHLRREIIIEMVEHRLIEPEGSSPTSWKFDNVCLKRAKIAASFY 69
Query 77 RDFDASLPAVALMLDLLDEVHQLRRKVRHL 106
RD + ++P +A+ LDLLD++ L +++R L
Sbjct 70 RDLEINMPGIAIALDLLDKIEHLEQRLRTL 99
>B1J5W6 Chaperone modulatory protein CbpM [Pseudomonas putida
(strain W619)]
Length=101
Score = 40.8 bits (94), Expect = 2e-09
Identities = 24/77 (31%), Positives = 43/77 (56%), Gaps = 2/77 (3%)
Query 26 LSLTHFAQVCGQSPDWVLQLIEYDILSATHPHQHQFLSEDVSR--ARRAYRLQRDFDASL 83
L + Q + D+V++++E+ I+ + ++L +D + ARRA +L ++ +
Sbjct 9 LDMRTLCQEADITADYVVEIVEHGIVEPSGRTPEEWLFDDQAPLLARRAAKLHQELELEW 68
Query 84 PAVALMLDLLDEVHQLR 100
VAL L+LL EV QLR
Sbjct 69 EGVALALELLQEVQQLR 85
>B0KK25 Chaperone modulatory protein CbpM [Pseudomonas putida
(strain GB-1)]
Length=101
Score = 37.7 bits (86), Expect = 3e-08
Identities = 23/77 (30%), Positives = 40/77 (52%), Gaps = 2/77 (3%)
Query 26 LSLTHFAQVCGQSPDWVLQLIEYDILSATHPHQHQFLSEDVSR--ARRAYRLQRDFDASL 83
L + Q + D V++++E+ I+ + +L +D + RRA +L ++ +
Sbjct 9 LDMRTLCQEADVTADCVIEIVEHGIVEPSGRTPEDWLFDDQAPLLTRRAAKLHQELELEW 68
Query 84 PAVALMLDLLDEVHQLR 100
VAL L+LL EV QLR
Sbjct 69 EGVALALELLQEVQQLR 85
>Q88DH8 Chaperone modulatory protein CbpM [Pseudomonas putida
(strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)]
Length=101
Score = 35.4 bits (80), Expect = 2e-07
Identities = 21/77 (27%), Positives = 40/77 (52%), Gaps = 2/77 (3%)
Query 26 LSLTHFAQVCGQSPDWVLQLIEYDILSATHPHQHQFLSEDVSR--ARRAYRLQRDFDASL 83
L + Q + + V++++E+ I+ + +L +D + +RA +L ++ +
Sbjct 9 LDMRTLCQEADVTAECVIEIVEHGIVEPSGRTPEDWLFDDQAPLVTKRAVKLHQELELEW 68
Query 84 PAVALMLDLLDEVHQLR 100
VAL L+LL EV QLR
Sbjct 69 EGVALALELLQEVQQLR 85
>A5W9N5 Chaperone modulatory protein CbpM [Pseudomonas putida
(strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1)]
Length=101
Score = 35.4 bits (80), Expect = 2e-07
Identities = 21/77 (27%), Positives = 40/77 (52%), Gaps = 2/77 (3%)
Query 26 LSLTHFAQVCGQSPDWVLQLIEYDILSATHPHQHQFLSEDVSR--ARRAYRLQRDFDASL 83
L + Q + + V++++E+ I+ + +L +D + +RA +L ++ +
Sbjct 9 LDMRTLCQEADVTAECVIEIVEHGIVEPSGRTPEDWLFDDQAPLVTKRAVKLHQELELEW 68
Query 84 PAVALMLDLLDEVHQLR 100
VAL L+LL EV QLR
Sbjct 69 EGVALALELLQEVQQLR 85
>Q76IQ3 Tyrosine 3-monooxygenase [Canis lupus familiaris]
Length=495
Score = 32.3 bits (72), Expect = 6e-06
Identities = 21/63 (33%), Positives = 30/63 (48%), Gaps = 11/63 (17%)
Query 52 SATHPHQHQ------FLSEDVSRARR-----AYRLQRDFDASLPAVALMLDLLDEVHQLR 100
+A P+Q Q F+SE S A+ A R+QR F L +D+LD H +R
Sbjct 415 AAVQPYQDQTYQSVYFVSESFSDAKDKLRNYASRIQRPFSVKFDPYTLAIDVLDSPHAIR 474
Query 101 RKV 103
R +
Sbjct 475 RSL 477
Score = 16.2 bits (30), Expect = 2.1
Identities = 13/41 (32%), Positives = 19/41 (46%), Gaps = 8/41 (20%)
Query 66 VSRARRAYRLQRDFDASLPAVALMLD---LLDEVHQLRRKV 103
VS + + L FD L LD D+V++ RRK+
Sbjct 168 VSELDKCHHLVTKFDPDLD-----LDHPGFSDQVYRQRRKL 203
Score = 15.4 bits (28), Expect = 3.8
Identities = 13/31 (42%), Positives = 16/31 (52%), Gaps = 11/31 (35%)
Query 64 EDVSR---ARRAYRLQ--------RDFDASL 83
EDVSR R ++L+ RDF ASL
Sbjct 271 EDVSRFLKERTGFQLRPVAGLLSARDFLASL 301
>P24529 Tyrosine 3-monooxygenase [Mus musculus]
Length=498
Score = 32.3 bits (72), Expect = 6e-06
Identities = 21/63 (33%), Positives = 30/63 (48%), Gaps = 11/63 (17%)
Query 52 SATHPHQHQ------FLSEDVSRARR-----AYRLQRDFDASLPAVALMLDLLDEVHQLR 100
+A P+Q Q F+SE S A+ A R+QR F L +D+LD H +R
Sbjct 418 AAVQPYQDQTYQPVYFVSESFSDAKDKLRNYASRIQRPFSVKFDPYTLAIDVLDSPHTIR 477
Query 101 RKV 103
R +
Sbjct 478 RSL 480
Score = 14.2 bits (25), Expect = 9.3
Identities = 11/41 (27%), Positives = 17/41 (41%), Gaps = 9/41 (22%)
Query 62 LSEDVSRARRAYRLQRDFDASLPAVALMLDLLDEVHQLRRK 102
+S+DV AR + +P + LD+ H L K
Sbjct 152 VSDDVRSAR---------EDKVPWFPRKVSELDKCHHLVTK 183
Score = 14.2 bits (25), Expect = 9.3
Identities = 10/39 (26%), Positives = 14/39 (36%), Gaps = 11/39 (28%)
Query 18 EILDEQRGLSLTH-----------FAQVCGQSPDWVLQL 45
E+ +GL TH + CG D + QL
Sbjct 235 EVYATLKGLYATHACREHLEAFQLLERYCGYREDSIPQL 273
Score = 14.2 bits (25), Expect = 9.3
Identities = 6/7 (86%), Positives = 6/7 (86%), Gaps = 0/7 (0%)
Query 77 RDFDASL 83
RDF ASL
Sbjct 298 RDFLASL 304
Lambda K H a alpha
0.331 0.142 0.436 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 132902
Database: 5b95da4dd6faa4c653e4ec2b8c6d1eb0.SwissProt.fasta
Posted date: May 20, 2024 2:30 AM
Number of letters in database: 2,129
Number of sequences in database: 13
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
