BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 1be7a6c4419ac106b16feb95807908e9.SwissProt.fasta
23 sequences; 7,715 total letters
Query= ACIAD0406
Length=314
Score E
Sequences producing significant alignments: (Bits) Value
Q83CJ2 Curved DNA-binding protein [Coxiella burnetii (strain RSA ... 254 9e-87
A9NDK6 Curved DNA-binding protein [Coxiella burnetii (strain RSA ... 254 9e-87
A9KE65 Curved DNA-binding protein [Coxiella burnetii (strain Dugw... 254 9e-87
Q88DH7 Curved DNA-binding protein [Pseudomonas putida (strain ATC... 216 6e-72
A5W9N6 Curved DNA-binding protein [Pseudomonas putida (strain ATC... 216 6e-72
B0KK26 Curved DNA-binding protein [Pseudomonas putida (strain GB-1)] 216 8e-72
Q1I490 Curved DNA-binding protein [Pseudomonas entomophila (strai... 215 3e-71
B1J5W7 Curved DNA-binding protein [Pseudomonas putida (strain W619)] 214 6e-71
Q87VN8 Curved DNA-binding protein [Pseudomonas syringae pv. tomat... 203 9e-67
A8GIL6 Curved DNA-binding protein [Serratia proteamaculans (strai... 196 4e-64
B7LFA9 Curved DNA-binding protein [Escherichia coli (strain 55989... 195 1e-63
B7NLC5 Curved DNA-binding protein [Escherichia coli O7:K1 (strain... 194 2e-63
B7LP19 Curved DNA-binding protein [Escherichia fergusonii (strain... 194 2e-63
P36659 Curved DNA-binding protein [Escherichia coli (strain K12)] 193 4e-63
P63263 Curved DNA-binding protein [Salmonella typhimurium (strain... 190 9e-62
P35514 Chaperone protein DnaJ [Lactococcus lactis subsp. lactis (... 183 2e-58
G2K045 Chaperone protein DnaJ [Listeria monocytogenes serotype 1/... 181 1e-57
Q9KWS6 Chaperone protein DnaJ [Parageobacillus thermoglucosidasius] 179 1e-56
P45555 Chaperone protein DnaJ [Staphylococcus aureus] 175 3e-55
P17631 Chaperone protein DnaJ [Bacillus subtilis (strain 168)] 169 8e-53
O87778 Chaperone protein DnaJ [Latilactobacillus sakei] 139 1e-41
Q05646 Chaperone protein DnaJ [Erysipelothrix rhusiopathiae] 137 7e-41
Q93R26 Chaperone protein DnaJ [Tetragenococcus halophilus] 135 7e-40
>Q83CJ2 Curved DNA-binding protein [Coxiella burnetii (strain
RSA 493 / Nine Mile phase I)]
Length=313
Score = 254 bits (649), Expect = 9e-87
Identities = 144/318 (45%), Positives = 196/318 (62%), Gaps = 21/318 (7%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
Q+YY+ LGV+RDAT DEIKKSYRKLARKYHPDVS E +AE K + + AY+ L + EK+
Sbjct 4 QDYYKILGVSRDATADEIKKSYRKLARKYHPDVSSEPNAEEKFKQVKEAYEVLKDVEKRK 63
Query 63 EYDQMLDHPQGFSGFGQGT-----PGGAGFDGGQFYQQGHASDFSGF-EDLFGRFGAGFG 116
YD + SG+ QG PG GG+ + FS F E LFG G
Sbjct 64 AYDAI------GSGWKQGQGFTPPPGWESRPGGEGVRPEFREGFSDFFESLFGGLG---- 113
Query 117 GSNQQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQRKT--LQ 174
++ RQ RG+DQH+ + V LE A++G+T+ LTLQ P ++ Y +V KT L+
Sbjct 114 -QEARWTRQEFKQRGQDQHSRVTVSLEEAFNGSTRLLTLQEPIVD-YQTGQVTSKTRQLR 171
Query 175 VKIPKGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWE 234
+KIP G+ EGQQIRL GQG GI G NGDLY+EI VEG DVY + V PWE
Sbjct 172 IKIPAGVTEGQQIRLQGQGLPGIGGAPNGDLYLEIHLAPHSLFTVEGKDVYLNLPVTPWE 231
Query 235 AALGKNIEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKTPGNLYLVLNIVLPEAQTEQ 294
AALG + + T G +++ LP ++TGQ+LRLK +G+P TPG+ Y+++ I +PE + +Q
Sbjct 232 AALGAKVSIPTLGGSVDLTLPPGSQTGQKLRLKGRGLPGGTPGDQYVLIKIYIPEPKNDQ 291
Query 295 QQQAYETLAQAFASFKPR 312
Q++ Y+ +A+ F PR
Sbjct 292 QKELYQQMAEQM-PFDPR 308
>A9NDK6 Curved DNA-binding protein [Coxiella burnetii (strain
RSA 331 / Henzerling II)]
Length=313
Score = 254 bits (649), Expect = 9e-87
Identities = 144/318 (45%), Positives = 196/318 (62%), Gaps = 21/318 (7%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
Q+YY+ LGV+RDAT DEIKKSYRKLARKYHPDVS E +AE K + + AY+ L + EK+
Sbjct 4 QDYYKILGVSRDATADEIKKSYRKLARKYHPDVSSEPNAEEKFKQVKEAYEVLKDVEKRK 63
Query 63 EYDQMLDHPQGFSGFGQGT-----PGGAGFDGGQFYQQGHASDFSGF-EDLFGRFGAGFG 116
YD + SG+ QG PG GG+ + FS F E LFG G
Sbjct 64 AYDAI------GSGWKQGQGFTPPPGWESRPGGEGVRPEFREGFSDFFESLFGGLG---- 113
Query 117 GSNQQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQRKT--LQ 174
++ RQ RG+DQH+ + V LE A++G+T+ LTLQ P ++ Y +V KT L+
Sbjct 114 -QEARWTRQEFKQRGQDQHSRVTVSLEEAFNGSTRLLTLQEPIVD-YQTGQVTSKTRQLR 171
Query 175 VKIPKGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWE 234
+KIP G+ EGQQIRL GQG GI G NGDLY+EI VEG DVY + V PWE
Sbjct 172 IKIPAGVTEGQQIRLQGQGLPGIGGAPNGDLYLEIHLAPHSLFTVEGKDVYLNLPVTPWE 231
Query 235 AALGKNIEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKTPGNLYLVLNIVLPEAQTEQ 294
AALG + + T G +++ LP ++TGQ+LRLK +G+P TPG+ Y+++ I +PE + +Q
Sbjct 232 AALGAKVSIPTLGGSVDLTLPPGSQTGQKLRLKGRGLPGGTPGDQYVLIKIYIPEPKNDQ 291
Query 295 QQQAYETLAQAFASFKPR 312
Q++ Y+ +A+ F PR
Sbjct 292 QKELYQQMAEQM-PFDPR 308
>A9KE65 Curved DNA-binding protein [Coxiella burnetii (strain
Dugway 5J108-111)]
Length=313
Score = 254 bits (649), Expect = 9e-87
Identities = 144/318 (45%), Positives = 196/318 (62%), Gaps = 21/318 (7%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
Q+YY+ LGV+RDAT DEIKKSYRKLARKYHPDVS E +AE K + + AY+ L + EK+
Sbjct 4 QDYYKILGVSRDATADEIKKSYRKLARKYHPDVSSEPNAEEKFKQVKEAYEVLKDVEKRK 63
Query 63 EYDQMLDHPQGFSGFGQGT-----PGGAGFDGGQFYQQGHASDFSGF-EDLFGRFGAGFG 116
YD + SG+ QG PG GG+ + FS F E LFG G
Sbjct 64 AYDAI------GSGWKQGQGFTPPPGWESRPGGEGVRPEFREGFSDFFESLFGGLG---- 113
Query 117 GSNQQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQRKT--LQ 174
++ RQ RG+DQH+ + V LE A++G+T+ LTLQ P ++ Y +V KT L+
Sbjct 114 -QEARWTRQEFKQRGQDQHSRVTVSLEEAFNGSTRLLTLQEPIVD-YQTGQVTSKTRQLR 171
Query 175 VKIPKGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWE 234
+KIP G+ EGQQIRL GQG GI G NGDLY+EI VEG DVY + V PWE
Sbjct 172 IKIPAGVTEGQQIRLQGQGLPGIGGAPNGDLYLEIHLAPHSLFTVEGKDVYLNLPVTPWE 231
Query 235 AALGKNIEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKTPGNLYLVLNIVLPEAQTEQ 294
AALG + + T G +++ LP ++TGQ+LRLK +G+P TPG+ Y+++ I +PE + +Q
Sbjct 232 AALGAKVSIPTLGGSVDLTLPPGSQTGQKLRLKGRGLPGGTPGDQYVLIKIYIPEPKNDQ 291
Query 295 QQQAYETLAQAFASFKPR 312
Q++ Y+ +A+ F PR
Sbjct 292 QKELYQQMAEQM-PFDPR 308
>Q88DH7 Curved DNA-binding protein [Pseudomonas putida (strain
ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)]
Length=319
Score = 216 bits (551), Expect = 6e-72
Identities = 126/316 (40%), Positives = 183/316 (58%), Gaps = 11/316 (3%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY+ LGV A IK +YRKLARKYHPDVSKE DAE K + N AY+ L + +K+
Sbjct 4 KDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSKERDAEEKFKEANEAYEVLGDAQKRA 63
Query 63 EYDQMLDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAG---FGGSN 119
E+D++ + Q PG GG ++ G SDF F +FG AG FGG+
Sbjct 64 EFDEIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDF--FSSIFGGRSAGGNPFGGAR 121
Query 120 QQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPE-VQRKTLQVKIP 178
QQ + R RG+D + V LE ++ ++ Q+P NA G+ KTL V+IP
Sbjct 122 QQQRSAGR--RGQDVELELAVFLEETLSKESKQISFQVPQTNAMGQRTGFTTKTLNVRIP 179
Query 179 KGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALG 238
G+ +G++IRL GQG G GG NGDL++ I+ VEG D+ T+ +APWEAALG
Sbjct 180 AGVTDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALG 239
Query 239 KNIEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNK--TPGNLYLVLNIVLPEAQTEQQQ 296
+ V T G++N+ + ++++GQ+LR+ KG+ NK GNLY L +V+P A E +
Sbjct 240 AKVAVPTLDGKINLTIRPDSQSGQRLRVPGKGLANKQGERGNLYAQLKVVMPPASDESAR 299
Query 297 QAYETLAQAFASFKPR 312
+ + L++ A+F PR
Sbjct 300 ELWTKLSEK-AAFNPR 314
>A5W9N6 Curved DNA-binding protein [Pseudomonas putida (strain
ATCC 700007 / DSM 6899 / BCRC 17059 / F1)]
Length=319
Score = 216 bits (551), Expect = 6e-72
Identities = 126/316 (40%), Positives = 183/316 (58%), Gaps = 11/316 (3%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY+ LGV A IK +YRKLARKYHPDVSKE DAE K + N AY+ L + +K+
Sbjct 4 KDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSKERDAEEKFKEANEAYEVLGDAQKRA 63
Query 63 EYDQMLDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAG---FGGSN 119
E+D++ + Q PG GG ++ G SDF F +FG AG FGG+
Sbjct 64 EFDEIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDF--FSSIFGGRSAGGNPFGGAR 121
Query 120 QQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPE-VQRKTLQVKIP 178
QQ + R RG+D + V LE ++ ++ Q+P NA G+ KTL V+IP
Sbjct 122 QQQRSAGR--RGQDVELELAVFLEETLSKESKQISFQVPQTNAMGQRTGFTTKTLNVRIP 179
Query 179 KGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALG 238
G+ +G++IRL GQG G GG NGDL++ I+ VEG D+ T+ +APWEAALG
Sbjct 180 AGVTDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALG 239
Query 239 KNIEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNK--TPGNLYLVLNIVLPEAQTEQQQ 296
+ V T G++N+ + ++++GQ+LR+ KG+ NK GNLY L +V+P A E +
Sbjct 240 AKVAVPTLDGKINLTIRPDSQSGQRLRVPGKGLVNKQGARGNLYAQLKVVMPPASDESAR 299
Query 297 QAYETLAQAFASFKPR 312
+ + L++ A+F PR
Sbjct 300 ELWTKLSEK-AAFNPR 314
>B0KK26 Curved DNA-binding protein [Pseudomonas putida (strain
GB-1)]
Length=318
Score = 216 bits (550), Expect = 8e-72
Identities = 125/315 (40%), Positives = 182/315 (58%), Gaps = 10/315 (3%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY+ LGV A IK +YRKLARKYHPDVSKE DAE K + N AY+ L + +K+
Sbjct 4 KDYYKILGVEPTADDKAIKAAYRKLARKYHPDVSKERDAEDKFKEANEAYEVLGDAQKRA 63
Query 63 EYDQMLDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAG--FGGSNQ 120
E+D++ + Q PG GG ++ G SDF F +FG G G FGG+ Q
Sbjct 64 EFDEIRKYGGQHGRPFQAPPGWENRGGGGGFEGGDFSDF--FSSIFGGRGGGNPFGGARQ 121
Query 121 QYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPE-VQRKTLQVKIPK 179
Q + R RG+D + V LE ++ ++ Q+P NA G+ KTL VKIP
Sbjct 122 QQRSAGR--RGQDVELELAVFLEETLSKESKQISFQVPQTNAMGQRTGFTTKTLNVKIPA 179
Query 180 GMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGK 239
G+ +G++IRL GQG G GG NGDL++ ++ VEG D+ T+ +APWEAALG
Sbjct 180 GVTDGERIRLKGQGAPGSGGGANGDLFLTLRMAPHPLFDVEGHDLIITVPLAPWEAALGA 239
Query 240 NIEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNK--TPGNLYLVLNIVLPEAQTEQQQQ 297
+ V T G++N+ + ++++GQ+LR+ KG+ NK GNLY L +V+P E ++
Sbjct 240 KVAVPTLEGKINLTIRPDSQSGQRLRVPGKGLANKQGERGNLYAQLKVVMPTTSDESTRE 299
Query 298 AYETLAQAFASFKPR 312
+ L++ A+F PR
Sbjct 300 LWAKLSEK-AAFNPR 313
>Q1I490 Curved DNA-binding protein [Pseudomonas entomophila (strain
L48)]
Length=321
Score = 215 bits (547), Expect = 3e-71
Identities = 130/324 (40%), Positives = 186/324 (57%), Gaps = 25/324 (8%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY+ LGV A IK +YRKLARKYHPDVSKE DAE K + N AY+ L + +K+
Sbjct 4 KDYYKILGVEASADEKAIKAAYRKLARKYHPDVSKERDAEDKFKEANEAYEVLGDKDKRA 63
Query 63 EYDQMLDH----------PQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGFEDLFG-RF 111
EYD++ + P G+ G G GG GF+GG F SDF F +FG R
Sbjct 64 EYDEIRKYGGQHGRPFQAPPGWQSRG-GNGGGGGFEGGDF------SDF--FSSIFGARG 114
Query 112 GAGFGGSNQQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPE-VQR 170
G FGG + QR RG+D + V LE + ++ ++ Q+P N G+
Sbjct 115 GNPFGGGGGRQQRSA-GRRGQDVELELAVFLEETLNKESKQISFQVPQTNGAGQRTGFTT 173
Query 171 KTLQVKIPKGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDV 230
KTL VKIP G+ +G++IRL GQG G+ GG NGDL++ I+ VEG D+ T+ +
Sbjct 174 KTLNVKIPAGVTDGERIRLKGQGAPGVGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPL 233
Query 231 APWEAALGKNIEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNK--TPGNLYLVLNIVLP 288
APWEAALG + V T +G++N+ + ++++GQ+LR+K G+ NK G+LY L +V+P
Sbjct 234 APWEAALGAKVAVPTLTGKINLTIRPDSQSGQRLRVKGMGLLNKQGERGDLYAQLKVVMP 293
Query 289 EAQTEQQQQAYETLAQAFASFKPR 312
AQ++ + T A+F PR
Sbjct 294 -AQSDAAARELWTQLSEKAAFNPR 316
>B1J5W7 Curved DNA-binding protein [Pseudomonas putida (strain
W619)]
Length=317
Score = 214 bits (544), Expect = 6e-71
Identities = 128/321 (40%), Positives = 184/321 (57%), Gaps = 23/321 (7%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY+ LGV A IK +YRKLARKYHPDVSKE DAE K + N AY+ L + +K+
Sbjct 4 KDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSKERDAEEKFKEANEAYEVLGDAQKRA 63
Query 63 EYDQMLDHPQGFSGFGQGTPG-------GAGFDGGQFYQQGHASDFSGFEDLFG-RFGAG 114
E+D++ + Q PG G GF+GG F SDF F +FG R G
Sbjct 64 EFDEIRKYGGQHGRPFQAPPGWENRGGAGGGFEGGDF------SDF--FSSIFGARGGNP 115
Query 115 FGGSNQQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPE-VQRKTL 173
FGG+ QQ ++ RG+D + + LE ++ ++ Q+P NA G+ KTL
Sbjct 116 FGGARQQ---RSAGRRGQDVELELAIFLEETLSKESKQISFQVPQTNAAGQRTGFTTKTL 172
Query 174 QVKIPKGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPW 233
VKIP G+ +G++IRL GQG G GG NGDL++ I+ VEG D+ T+ +APW
Sbjct 173 NVKIPAGVSDGERIRLKGQGAPGSAGGANGDLFLTIRMAPHPLFDVEGQDLIITVPLAPW 232
Query 234 EAALGKNIEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNK--TPGNLYLVLNIVLPEAQ 291
EAALG + V T G++N+ + ++++GQ+LR+ KG+ NK GNLY L +V+P A
Sbjct 233 EAALGTKVAVPTLDGKINLTIRPDSQSGQRLRVPGKGLANKQGERGNLYAQLKVVMPPAS 292
Query 292 TEQQQQAYETLAQAFASFKPR 312
+Q + L++ A+F PR
Sbjct 293 DASTRQLWTQLSEK-AAFNPR 312
>Q87VN8 Curved DNA-binding protein [Pseudomonas syringae pv. tomato
(strain ATCC BAA-871 / DC3000)]
Length=314
Score = 203 bits (516), Expect = 9e-67
Identities = 130/318 (41%), Positives = 183/318 (58%), Gaps = 20/318 (6%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY+ L V A IK +YRKLARKYHPDVSKEA AE K + + AY+ LS+PEK+
Sbjct 4 KDYYKILDVEPAADDKAIKTAYRKLARKYHPDVSKEAGAEDKFKEASEAYEVLSSPEKRA 63
Query 63 EYDQMLDHPQGFSGFGQGTPGG----AGFDGGQFYQQGHASDFSGFEDLFGRFGAGFGGS 118
EYD++ + G G TP G AG G F + +DFS F F + FGG
Sbjct 64 EYDELRKY--GRQGRPFQTPPGWQSRAGAGAGGFEE---TADFSEF------FSSIFGGR 112
Query 119 NQQYQRQTRSYR-GEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQ-RKTLQVK 176
QQ R R G+D + V LE G ++ ++ ++P + G+ KTL VK
Sbjct 113 PQQGGRTRNPGRKGQDVEMELAVFLEETLSGESKQVSFKVPQHSPNGQRMGDITKTLNVK 172
Query 177 IPKGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAA 236
IP G+ +G++IRL GQG GI GG NGDLY+ I+ VEG D+ T+ +APWEAA
Sbjct 173 IPAGVVDGERIRLKGQGAPGIGGGANGDLYLIIRLAPHPMFEVEGHDLVITVPLAPWEAA 232
Query 237 LGKNIEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKT--PGNLYLVLNIVLPEAQTEQ 294
LG + V T + RLN+ + +++ GQ+LR+K G+ NK+ G+LY L IV+P+ E
Sbjct 233 LGTKVAVPTLTSRLNLTIRPDSQNGQRLRIKGNGLMNKSGERGDLYAQLKIVMPKQTDEA 292
Query 295 QQQAYETLAQAFASFKPR 312
+ ++ LA + A+F PR
Sbjct 293 ARALWQKLADS-AAFDPR 309
>A8GIL6 Curved DNA-binding protein [Serratia proteamaculans (strain
568)]
Length=309
Score = 196 bits (498), Expect = 4e-64
Identities = 114/313 (36%), Positives = 177/313 (57%), Gaps = 18/313 (6%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY LGV IK +YR+LARKYHPDVS E++AE + + + AY+ L + E++
Sbjct 4 KDYYAILGVKPADDLKAIKTAYRRLARKYHPDVSTESNAEEQFKLVAEAYEVLKDDERRA 63
Query 63 EYDQMLDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSG-FEDLFGRFGAGFGGSNQQ 121
EYDQ+ +H + FG+ T G+ + A DFS F +FG G QQ
Sbjct 64 EYDQLREH-RNDPNFGRQTQHGSAHN---------AEDFSDIFSSMFGEHARG-----QQ 108
Query 122 YQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQ-RKTLQVKIPKG 180
++++ + RG+D + + LE T+ + +P NA+G E + KTL VKIP G
Sbjct 109 HRQRRQGMRGQDVEMEVAIFLEETQAEQTRTIRYSLPVYNAFGMVEQEIPKTLNVKIPAG 168
Query 181 MKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGKN 240
+ +G++IRL GQG G +GG +GDLY+ I+ + G ++ + VAPWEAALG
Sbjct 169 VGDGERIRLKGQGGPGTDGGASGDLYLIIRIAPHPLFDIVGHNLEIVLPVAPWEAALGAK 228
Query 241 IEVMTPSGRLNVNLPKNARTGQQLRLKDKG-IPNKTPGNLYLVLNIVLPEAQTEQQQQAY 299
+ V T + + +P ++TGQ+LR+K KG + K G+LY V+ +++P E+ +
Sbjct 229 VPVPTLKDSILLTIPAGSQTGQRLRIKGKGLVGKKETGDLYAVIKVMMPPKPDEKSAALW 288
Query 300 ETLAQAFASFKPR 312
+ LA+A SF PR
Sbjct 289 QQLAEAQQSFDPR 301
>B7LFA9 Curved DNA-binding protein [Escherichia coli (strain 55989
/ EAEC)]
Length=306
Score = 195 bits (495), Expect = 1e-63
Identities = 121/314 (39%), Positives = 169/314 (54%), Gaps = 21/314 (7%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY +GV IK +YR+LARKYHPDVSKE DAEA+ + + A++ LS+ +++
Sbjct 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRA 63
Query 63 EYDQMLDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGF--EDLFGRFGAGFGGSNQ 120
EYDQM H + QF +Q H SD F ED F + FG +
Sbjct 64 EYDQMWQHR----------------NDPQFNRQFHHSDGQSFNAEDFDDIFSSIFGQHAR 107
Query 121 QYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQ-RKTLQVKIPK 179
Q RQ + RG D + V LE + ++ +P NA+G E + KTL VKIP
Sbjct 108 Q-SRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPA 166
Query 180 GMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGK 239
G+ GQ+IRL GQG G NGG NGDL++ I + G D+ + V+PWEAALG
Sbjct 167 GVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGA 226
Query 240 NIEVMTPSGRLNVNLPKNARTGQQLRLKDKG-IPNKTPGNLYLVLNIVLPEAQTEQQQQA 298
+ V T + + +P ++ GQ+LR+K KG + K G+LY VL IV+P E
Sbjct 227 KVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAAL 286
Query 299 YETLAQAFASFKPR 312
++ LA A +SF PR
Sbjct 287 WQQLADAQSSFDPR 300
>B7NLC5 Curved DNA-binding protein [Escherichia coli O7:K1 (strain
IAI39 / ExPEC)]
Length=306
Score = 194 bits (493), Expect = 2e-63
Identities = 121/315 (38%), Positives = 172/315 (55%), Gaps = 23/315 (7%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY +GV IK +YR+LARKYHPDVSKE DAEA+ + + A++ LS+ +++
Sbjct 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRA 63
Query 63 EYDQMLDH---PQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAGFGGSN 119
EYDQM H PQ F G DG F +A DF +D+F + G +
Sbjct 64 EYDQMWQHRNDPQFSRQFQHG-------DGQSF----NAEDF---DDIF----SSIFGQH 105
Query 120 QQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQ-RKTLQVKIP 178
+ RQ + RG D + V LE + ++ +P NA+G E + KTL VKIP
Sbjct 106 ARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIP 165
Query 179 KGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALG 238
G+ GQ+IRL GQG G NGG NGDL++ I + G D+ + V+PWEAALG
Sbjct 166 AGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALG 225
Query 239 KNIEVMTPSGRLNVNLPKNARTGQQLRLKDKG-IPNKTPGNLYLVLNIVLPEAQTEQQQQ 297
+ V T + + +P ++ GQ+LR+K KG + K G+LY VL IV+P E
Sbjct 226 AKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAA 285
Query 298 AYETLAQAFASFKPR 312
++ LA A +SF+PR
Sbjct 286 LWQQLADAQSSFEPR 300
>B7LP19 Curved DNA-binding protein [Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226
/ LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)]
Length=306
Score = 194 bits (493), Expect = 2e-63
Identities = 122/314 (39%), Positives = 168/314 (54%), Gaps = 21/314 (7%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY +GV IK +YR+LARKYHPDVSKE DAEA+ + + A++ LS+ +++
Sbjct 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRA 63
Query 63 EYDQMLDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGF--EDLFGRFGAGFGGSNQ 120
EYDQM H + QF +Q H D F ED F + FG +
Sbjct 64 EYDQMWQHR----------------NDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHAR 107
Query 121 QYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQ-RKTLQVKIPK 179
Q RQ + RG D + V LE + ++ +P NA+G E + KTL VKIP
Sbjct 108 Q-ARQRPATRGHDIEIEVPVFLEETLSEHKRTISYNLPVYNAFGMVEQEIPKTLNVKIPA 166
Query 180 GMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGK 239
G+ GQ+IRL GQG G NGG NGDL++ I V G D+ + VAPWEAALG
Sbjct 167 GVGNGQRIRLKGQGTPGENGGPNGDLWLIIHIAPHPLFDVVGQDLEIVVPVAPWEAALGG 226
Query 240 NIEVMTPSGRLNVNLPKNARTGQQLRLKDKG-IPNKTPGNLYLVLNIVLPEAQTEQQQQA 298
+ V T + + +P ++ GQ+LR+K KG + K G+LY VL IV+P E
Sbjct 227 KVTVPTLKESILLTIPAGSQAGQRLRVKGKGLVSKKHTGDLYAVLKIVMPPKPDENATAL 286
Query 299 YETLAQAFASFKPR 312
++ LA A +SF PR
Sbjct 287 WQQLADAQSSFDPR 300
>P36659 Curved DNA-binding protein [Escherichia coli (strain K12)]
Length=306
Score = 193 bits (491), Expect = 4e-63
Identities = 120/314 (38%), Positives = 168/314 (54%), Gaps = 21/314 (7%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY +GV IK +YR+LARKYHPDVSKE DAEA+ + + A++ LS+ +++
Sbjct 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRA 63
Query 63 EYDQMLDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGF--EDLFGRFGAGFGGSNQ 120
EYDQM H + QF +Q H D F ED F + FG +
Sbjct 64 EYDQMWQHR----------------NDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHAR 107
Query 121 QYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQ-RKTLQVKIPK 179
Q RQ + RG D + V LE + ++ +P NA+G E + KTL VKIP
Sbjct 108 Q-SRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPA 166
Query 180 GMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGK 239
G+ GQ+IRL GQG G NGG NGDL++ I + G D+ + V+PWEAALG
Sbjct 167 GVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGA 226
Query 240 NIEVMTPSGRLNVNLPKNARTGQQLRLKDKG-IPNKTPGNLYLVLNIVLPEAQTEQQQQA 298
+ V T + + +P ++ GQ+LR+K KG + K G+LY VL IV+P E
Sbjct 227 KVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAAL 286
Query 299 YETLAQAFASFKPR 312
++ LA A +SF PR
Sbjct 287 WQQLADAQSSFDPR 300
>P63263 Curved DNA-binding protein [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=306
Score = 190 bits (482), Expect = 9e-62
Identities = 117/316 (37%), Positives = 171/316 (54%), Gaps = 25/316 (8%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY +GV IK +YR+LARKYHPDVSKE DAEA+ + + A++ LS+ +++
Sbjct 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRA 63
Query 63 EYDQMLDH---PQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSG-FEDLFGRFGAGFGGS 118
EYDQ+ H PQ F Q GQ Y +A DF F +FG+ G
Sbjct 64 EYDQLWQHRNDPQFNRQFQQHE--------GQPY---NAEDFDDIFSSIFGQHG------ 106
Query 119 NQQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQ-RKTLQVKI 177
++ + RG D + V LE + ++ +P NA+G E + KTL VKI
Sbjct 107 --RHSHHRHAARGHDIEIEVAVFLEETLEEHQRTISYSVPVYNAFGLVEREIPKTLNVKI 164
Query 178 PKGMKEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAAL 237
P G+ GQ+IRL GQG G NGG NGDL++ I + D+ + +APWEAAL
Sbjct 165 PAGVSNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVNQDLEVVLPLAPWEAAL 224
Query 238 GKNIEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKT-PGNLYLVLNIVLPEAQTEQQQ 296
G + V T R+ + +P ++ GQ+LR+K KG+ +K G+LY ++ IV+P E+
Sbjct 225 GAKVSVPTLKERILLTIPPGSQAGQRLRIKGKGLASKKHTGDLYAIIKIVMPPKPDEKTA 284
Query 297 QAYETLAQAFASFKPR 312
++ LA A +SF PR
Sbjct 285 ALWQQLADAQSSFDPR 300
>P35514 Chaperone protein DnaJ [Lactococcus lactis subsp. lactis
(strain IL1403)]
Length=379
Score = 183 bits (465), Expect = 2e-58
Identities = 121/366 (33%), Positives = 183/366 (50%), Gaps = 75/366 (20%)
Query 5 YYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKTEY 64
YYE LGV ++A+ DEIKK+YRK+++KYHPD++KE AE K + + AY+TLS+ +K+ Y
Sbjct 6 YYERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEEKYKEVQEAYETLSDEQKRAAY 65
Query 65 DQMLDHPQGFSGFGQGTPGGA----GFDGGQFYQQGHASDFSGFEDLFGRFGAGFG---- 116
DQ + GFG G GGA GF GG + F GFED+F F G G
Sbjct 66 DQYGEAGAN-GGFGGGGFGGASGFSGFGGG-------SGGFGGFEDIFSSFFGGGGAQVN 117
Query 117 ------GSNQQY-------------QRQTRSYRGEDQHA--------------------- 136
G + QY ++Q + R E H
Sbjct 118 PNAPRQGDDLQYRINLKFEEAIFGVEKQVKYNREELCHTCGGSGAKAGTHPETCHKCGGR 177
Query 137 --------------SIEVDLEVAYHGTTQNLTLQIPTLNAYGEPEVQRKTLQVKIPKGMK 182
+V +V +GT + + + T + G +V T++V +P G++
Sbjct 178 GQINVVRDTPLGRMQTQVTCDVC-NGTGKEIKEKCETCHGSGHEKVAH-TVKVTVPAGVE 235
Query 183 EGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGKNIE 242
GQ++RL GQG AG+NGG GDLY+ Q + +D+ +G ++YY + + +AALG IE
Sbjct 236 TGQKMRLQGQGDAGVNGGPYGDLYVVFQVEASDKFERDGAEIYYKMPMDFVQAALGDEIE 295
Query 243 VMTPSGRLNVNLPKNARTGQQLRLKDKGIP---NKTPGNLYLVLNIVLPEAQTEQQQQAY 299
V T G + + +P +TG RLK KG P G+ Y+++NIV P+ + Q++A
Sbjct 296 VPTVHGNVKLKIPAGTQTGANFRLKGKGAPKLRGSGNGDQYVIINIVTPKNLNQAQKEAL 355
Query 300 ETLAQA 305
+ A+A
Sbjct 356 QAFAKA 361
>G2K045 Chaperone protein DnaJ [Listeria monocytogenes serotype
1/2a (strain 10403S)]
Length=377
Score = 181 bits (460), Expect = 1e-57
Identities = 113/363 (31%), Positives = 186/363 (51%), Gaps = 76/363 (21%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YYE LG+++ A+ DEIKK+YRKL+++YHPD++KEA A+ K + I+ AY+ LS+P+K+
Sbjct 4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query 63 EYDQM--LDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAGFG---- 116
+YDQ +D QGF G G G GF GG FSGFED+F F G G
Sbjct 64 QYDQYGHVDPNQGFGGGG----AGGGFGGG---------GFSGFEDIFDTFFGGGGRQQD 110
Query 117 ------GSNQQYQRQTR---SYRGEDQH-------------------------------- 135
GS+ QY + + + G+D
Sbjct 111 PNAPRQGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTCHGSGAKPGTTPEKCSHCGGK 170
Query 136 ASIEVDLEVAY------------HGTTQNLTLQIPTLNAYGEPEVQRKTLQVKIPKGMKE 183
SI V+ + +GT + + + PT + G + K ++VK+P G+ +
Sbjct 171 GSINVEQNTPFGRVVNKRTCQYCNGTGKEIKEKCPTCHGKGR-VTKTKKIKVKVPAGVND 229
Query 184 GQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGKNIEV 243
GQQ+R++G+G+AGINGG NGDLY+ + E D+Y + + +A LG I+V
Sbjct 230 GQQMRVSGEGEAGINGGPNGDLYVVFVVIPDEFFEREADDIYVEVPITFVQATLGDEIDV 289
Query 244 MTPSGRLNVNLPKNARTGQQLRLKDKGIPN---KTPGNLYLVLNIVLPEAQTEQQQQAYE 300
T G++ + +P +TG RL+ KG+P+ G+ ++++ +++P+ ++Q++
Sbjct 290 PTVHGKVRLKIPSGTQTGTTFRLRGKGVPHLRGNGTGDQHVIVKVIVPKKLDDKQKEILR 349
Query 301 TLA 303
A
Sbjct 350 EFA 352
>Q9KWS6 Chaperone protein DnaJ [Parageobacillus thermoglucosidasius]
Length=380
Score = 179 bits (453), Expect = 1e-56
Identities = 127/375 (34%), Positives = 181/375 (48%), Gaps = 79/375 (21%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YYE LGV+++AT +EIKK+YRKL++KYHPD++KE DA K + I AY+ LS+ +K+
Sbjct 4 RDYYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRA 63
Query 63 EYDQM--LDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAGF----- 115
YDQ D QGF GF FD G F S FSGF+D+F F G
Sbjct 64 HYDQFGHADPNQGFGGFRSDD-----FDFGGF------SGFSGFDDIFSTFFGGGRRRDP 112
Query 116 ----GGSNQQYQRQTRSYRGEDQHASIEVDLEVAY------------------------H 147
G++ QY T + E+ E D+E+ H
Sbjct 113 NAPRAGADLQY---TMTLTFEEAVFGKETDIEIPREETCNTCHGTGAKPGTKKETCSYCH 169
Query 148 GTTQNLTLQ--------------------------IPTLNAYGEPEVQRKTLQVKIPKGM 181
GT Q T Q T G + +RK + VKIP G+
Sbjct 170 GTGQISTEQSTPFGRIVNRRTCPYCGGTGQYIKERCTTCGGTGRVK-RRKKIHVKIPAGI 228
Query 182 KEGQQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGKNI 241
+GQQ+R+ GQG+ GINGG GDLYI + + +G D+Y I + +AALG I
Sbjct 229 DDGQQLRVAGQGEPGINGGPPGDLYIVFHVEPHEFFERDGDDIYCEIPLTFAQAALGDEI 288
Query 242 EVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKTP---GNLYLVLNIVLPEAQTEQQQQA 298
EV T G++ + +P +TG + RLK KG+PN G+ ++++ +V P TE+Q+Q
Sbjct 289 EVPTLHGKVRLKIPAGTQTGTKFRLKGKGVPNVRGYGYGDQHVIVRVVTPTKLTEKQKQL 348
Query 299 YETLAQAFASFKPRG 313
Q S +G
Sbjct 349 LREFDQLGGSSMHQG 363
>P45555 Chaperone protein DnaJ [Staphylococcus aureus]
Length=379
Score = 175 bits (444), Expect = 3e-55
Identities = 119/368 (32%), Positives = 186/368 (51%), Gaps = 82/368 (22%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YYE LG+++DA+ DEIKK+YRKL++KYHPD++KE A+ K + I+ AY+ LS+ K+
Sbjct 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRA 63
Query 63 EYDQM-LDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDF--SGFEDLFGRFGAGFGGSN 119
DQ D PQGF GG GF+G F G S F GFED+F F FGG +
Sbjct 64 TIDQFGHDGPQGF--------GGQGFNGSDF---GGFSGFGGGGFEDIFSSF---FGGGS 109
Query 120 QQYQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQ---------------------IP 158
Q+ + +G+D ++ + E A GTT+ ++++
Sbjct 110 QRDPNAPQ--KGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCS 167
Query 159 TLNAYGEPEVQRKTL-----------------------------------QVKIPKGMKE 183
N G V++ T+ VK+ + E
Sbjct 168 YCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENKTVKLEVKVPE 227
Query 184 G----QQIRLNGQGQAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGK 239
G QQIRL G+G G+NGG GDLY+ + K ++ +G D+YY ++V+ +AALG
Sbjct 228 GVDNEQQIRLAGEGSPGVNGGPAGDLYVVFRVKPSETFKRDGDDIYYKLNVSFPQAALGD 287
Query 240 NIEVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKTP---GNLYLVLNIVLPEAQTEQQQ 296
I++ T + + + +P +TG+Q RLK+KGI N G+LY+ + +V P T++Q+
Sbjct 288 EIKIPTLNNEVMLTIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDIKVVTPTKLTDRQK 347
Query 297 QAYETLAQ 304
+ + AQ
Sbjct 348 ELMKEFAQ 355
>P17631 Chaperone protein DnaJ [Bacillus subtilis (strain 168)]
Length=375
Score = 169 bits (427), Expect = 8e-53
Identities = 114/354 (32%), Positives = 182/354 (51%), Gaps = 58/354 (16%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YYE LGV++ A+ DEIKK+YRKL++KYHPD++KEA ++ K + + AY+TLS+ +K+
Sbjct 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRA 63
Query 63 EYDQM--LDHPQGF--SGFGQGTPGGAGFD--------GGQFYQQGHA----SDFS---- 102
YDQ D QGF GFG G GG GFD GG + +A +D
Sbjct 64 HYDQFGHTDPNQGFGGGGFGGGDFGGFGFDDIFSSIFGGGTRRRDPNAPRQGADLQYTMT 123
Query 103 -GFEDLFGRFGAGFG-------------------GSNQQYQRQTRSYRGEDQHASIE--- 139
FED A FG G+ +T S+ G ++E
Sbjct 124 LSFED------AAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNT 177
Query 140 -----VDLEVAYHGTTQNLTLQIPTLNAYGEPEV-QRKTLQVKIPKGMKEGQQIRLNGQG 193
V+ V +H ++ + G+ ++ +RK + V IP G+ +GQQ+RL+GQG
Sbjct 178 PFGKVVNRRVCHHCEGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQG 237
Query 194 QAGINGGENGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGKNIEVMTPSGRLNVN 253
+ GINGG GDL++ + + +G D+Y + + +AALG +EV T G++ +
Sbjct 238 EPGINGGPAGDLFVVFHVRAHEFFERDGDDIYCEMPLTFAQAALGDEVEVPTLHGKVKLK 297
Query 254 LPKNARTGQQLRLKDKGIPNKT---PGNLYLVLNIVLPEAQTEQQQQAYETLAQ 304
+P +TG + RL+ KG+ N G+ ++V+ +V P T++Q+ A+
Sbjct 298 IPAGTQTGTKFRLRGKGVQNVRGYGQGDQHIVVRVVTPTNLTDKQKDIIREFAE 351
>O87778 Chaperone protein DnaJ [Latilactobacillus sakei]
Length=383
Score = 139 bits (351), Expect = 1e-41
Identities = 105/366 (29%), Positives = 167/366 (46%), Gaps = 73/366 (20%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YY+ LGV RDA+ DEIKK+YRKL++KYHPD++K DAEAK + + AY+ LS+P+K+
Sbjct 5 RDYYDVLGVGRDASDDEIKKAYRKLSKKYHPDINKAPDAEAKFKEVTEAYEALSDPQKRA 64
Query 63 EYDQMLDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAGFGGSNQQY 122
YDQ H GFG G G GF G G A F GF+D+F F FGG +Q
Sbjct 65 AYDQ-YGHAGMNGGFGGGAGAGQGFGG----FGGGAEGFGGFDDIFSSF---FGGGARQQ 116
Query 123 QRQTRSYRGEDQHASIEVDLEVAYHGTTQNLT----LQIPTLNAYG-EPEVQRKTL---- 173
R +G D +++ E A G ++ + T + G +P +T
Sbjct 117 PNGPR--QGSDLQYRMDLKFEEAVFGKETKISYSREAECHTCHGSGAKPGTSAETCHKCH 174
Query 174 ---QVKIPKGMKEGQQI--------------------RLNGQGQ------------AGIN 198
Q+++ + G+ + +G G+ AG+
Sbjct 175 GAGQIQVERQTPLGRMMSRETCDVCGGTGKEIKSKCDTCHGTGREEERHTVKVKVPAGVE 234
Query 199 GGEN----------------GDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGKNIE 242
G+ GDL+I + +D +G ++ + ++ +AALG IE
Sbjct 235 DGQQMRLQGQGEAGSNGGPYGDLFIVFRVAPSDEFERDGAQIFVEVPISFVQAALGDEIE 294
Query 243 VMTPSGRLNVNLPKNARTGQQLRLKDKGIP---NKTPGNLYLVLNIVLPEAQTEQQQQAY 299
V T G + + +P +T RL+ KG P G+ + +N+V P++ +Q+ A
Sbjct 295 VNTVHGPVKLKIPAGTQTNTVFRLRGKGAPKLHGTGNGDQKVTVNVVTPKSLNSKQRDAL 354
Query 300 ETLAQA 305
+ A A
Sbjct 355 KAFAVA 360
>Q05646 Chaperone protein DnaJ [Erysipelothrix rhusiopathiae]
Length=370
Score = 137 bits (345), Expect = 7e-41
Identities = 103/366 (28%), Positives = 167/366 (46%), Gaps = 81/366 (22%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
+++YE LGV++ AT EIKK+YR+LA+KYHPD++KE AEAK + + AY+ LS+ +K+
Sbjct 5 RDFYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAEAKFKEVQEAYEVLSDSQKRA 64
Query 63 EYDQMLDHPQGFSGFGQGTPG-GAGFDGGQFYQQGHASDFSGFEDLFGRFGAGFGGSNQQ 121
YDQ G + F QG G G GF GG F F D+F F G GG Q
Sbjct 65 NYDQF-----GHAAFDQGAGGFGGGFSGG----------FDDFGDIFSSFFGGGGGG--Q 107
Query 122 YQRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQIPT-------LNAYGEPEVQ----- 169
+ +G+D+ S+ +D A G +++TL + A+ + +++
Sbjct 108 RRNPNGPMKGQDRFMSMRIDFMEAVFGANKSVTLNVDEECTSCHGSGAHSKDDIKTCSRC 167
Query 170 ----RKTLQVKIPKGMKEGQQI----------------RLNGQG------------QAGI 197
+ Q + P G+ + Q +G+G AGI
Sbjct 168 GGTGQTVTQQRTPFGVFQSQATCPDCGGSGKTITKRCGECHGKGFNTKRVEVDIKIPAGI 227
Query 198 NGGE----------------NGDLYIEIQYKDTDRIHVEGVDVYYTIDVAPWEAALGKNI 241
G+ NGDL+IEI EG D++ I ++ +A LG I
Sbjct 228 VTGQQLRVSGKGERGANGGPNGDLFIEIVVGTHKHFRREGNDIHINIPLSVIDATLGTEI 287
Query 242 EVMTPSGRLNVNLPKNARTGQQLRLKDKGIPNKTPGNL---YLVLNIVLPEAQTEQQQQA 298
EV T G + + +P + + RL++KG+ + G + Y+ + + +P + QQ++
Sbjct 288 EVPTVHGDVKLTIPAGTQPNTKFRLREKGVQDLRSGRMGDQYVEVKLEVPTKLSRQQREH 347
Query 299 YETLAQ 304
E L +
Sbjct 348 LEALKE 353
Score = 19.2 bits (38), Expect = 2.9
Identities = 7/17 (41%), Positives = 13/17 (76%), Gaps = 0/17 (0%)
Query 289 EAQTEQQQQAYETLAQA 305
EA+ ++ Q+AYE L+ +
Sbjct 44 EAKFKEVQEAYEVLSDS 60
>Q93R26 Chaperone protein DnaJ [Tetragenococcus halophilus]
Length=386
Score = 135 bits (339), Expect = 7e-40
Identities = 103/367 (28%), Positives = 164/367 (45%), Gaps = 74/367 (20%)
Query 3 QNYYEELGVTRDATPDEIKKSYRKLARKYHPDVSKEADAEAKMQAINVAYDTLSNPEKKT 62
++YYE LGV + A+ DEIKK+YRKL++KYHPDV++EADAE K + +TLS+P+K+
Sbjct 5 RDYYEVLGVDKGASDDEIKKAYRKLSKKYHPDVNQEADAEEKFKKFQKPMNTLSDPQKRA 64
Query 63 EYDQMLDHPQGFSGFGQGTPGGAGFDGGQFYQQGHASDFSGFEDLFGRFGAGFGGSNQQY 122
YDQ H + FG G GG G GG F A F GFED+F F FGG
Sbjct 65 AYDQ-YGHAGADANFGGGGAGGFGGFGGGF---SDAGGFGGFEDIFESF---FGGGRSAD 117
Query 123 QRQTRSYRGEDQHASIEVDLEVAYHGTTQNLTLQ-------------------------- 156
R +G+D SI + E A G ++ +
Sbjct 118 PNAPR--QGDDLQYSINLTFEEAVFGKDTEVSYKRNEVCHTCGGNGAKPGTQPETCHKCK 175
Query 157 -IPTLNAYGEPEVQRKTLQVKIPKGMKEGQQIR-----------------LNGQGQAGIN 198
T+NA + + R + G++I+ +N AG+
Sbjct 176 GSGTINAERQTPLGRVMTRQTCDVCHGTGKEIKEVCETCHGTGHEKKTHSVNVSVPAGVE 235
Query 199 GGEN----------------GDLYIEI--QYKDTDRIHVEGVDVYYTIDVAPWEAALGKN 240
G+ GDLY+ + ++ + +G ++YY + + +AALG
Sbjct 236 DGQQMRLANQGEAGTNGGPYGDLYVVLYCSHETCNIFDRDGSEIYYELPINFVQAALGDE 295
Query 241 IEVMTPSGRLNVNLPKNARTGQQLRLKDKGIP---NKTPGNLYLVLNIVLPEAQTEQQQQ 297
++V T G + + +P +T + RL+ KG P + G+ + + I+ P+ E+Q++
Sbjct 296 VDVPTVHGNVKLKIPAGTQTSTKFRLRGKGAPRLRGNSTGDQQVTVKIITPKNLNEEQRE 355
Query 298 AYETLAQ 304
A A+
Sbjct 356 ALRNFAE 362
Lambda K H a alpha
0.315 0.135 0.392 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1745820
Database: 1be7a6c4419ac106b16feb95807908e9.SwissProt.fasta
Posted date: May 29, 2024 5:12 PM
Number of letters in database: 7,715
Number of sequences in database: 23
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
