Comparative Genomics

ACIAD0413 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: fd8f5ef72a768cbbe75336d43651d741.TrEMBL.fasta
           15 sequences; 1,674 total letters



Query= ACIAD0413

Length=113
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FF02 Yip1 domain-containing protein [Acinetobacter baylyi (stra...  212     5e-77
A0A7G2SIP8 Yip1 domain-containing protein [Acinetobacter sp]          212     5e-77
A0A3R9DDP3 ABC transporter permease [Acinetobacter sp. FDAARGOS_515]  175     3e-62
A0A009YSI8 Putative membrane protein [Acinetobacter sp. 479375]       175     3e-62
A0A7T9UJ27 ABC transporter permease [Acinetobacter ursingii]          175     3e-62
A0A3D2SQZ2 ABC transporter permease [Acinetobacter ursingii]          174     9e-62
A0A3F3L9B8 ABC transporter permease [Acinetobacter ursingii]          173     1e-61
N9DES9 ABC transmembrane type-1 domain-containing protein [Acinet...  173     1e-61
A0A3A8ENR5 ABC transporter permease [Acinetobacter guerrae]           164     4e-58
A0A7S8XKT9 Transporter [Acinetobacter sp. TTH0-4]                     144     5e-50
A0A6L6GCT8 Uncharacterized protein [Acinetobacter faecalis]           144     7e-50
A0A241VD69 Uncharacterized protein [Acinetobacter sp. ANC 4218]       144     7e-50
A0A7T7R7D2 Uncharacterized protein [Acinetobacter sp. CS-2]           144     7e-50
A0A4V2LSD8 Uncharacterized protein [Acinetobacter sp. ANC 3781]       144     7e-50
A0A1A7RCG6 Uncharacterized protein [Acinetobacter gandensis]          144     7e-50


>Q6FF02 Yip1 domain-containing protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=112

 Score = 212 bits (540),  Expect = 5e-77
 Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV
Sbjct  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSATW  112
            LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSATW
Sbjct  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSATW  112


>A0A7G2SIP8 Yip1 domain-containing protein [Acinetobacter sp]
Length=112

 Score = 212 bits (540),  Expect = 5e-77
 Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV
Sbjct  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSATW  112
            LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSATW
Sbjct  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSATW  112


>A0A3R9DDP3 ABC transporter permease [Acinetobacter sp. FDAARGOS_515]
Length=112

 Score = 175 bits (443),  Expect = 3e-62
 Identities = 88/111 (79%), Positives = 105/111 (95%), Gaps = 0/111 (0%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+ALF SD+++QFHWS+LKSVLLILSLLP+SQGIL+LWQMSDA+SQI+VGFIALSIFSA+
Sbjct  1    MKALFFSDEIHQFHWSMLKSVLLILSLLPLSQGILTLWQMSDATSQIMVGFIALSIFSAI  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSAT  111
            LILSFYSALKATV+K+  +Q+IS +EQVI SIY Y+PMLSLAAMLSYL+AT
Sbjct  61   LILSFYSALKATVLKIVLEQQISNVEQVIVSIYRYVPMLSLAAMLSYLTAT  111


>A0A009YSI8 Putative membrane protein [Acinetobacter sp. 479375]
Length=112

 Score = 175 bits (443),  Expect = 3e-62
 Identities = 88/111 (79%), Positives = 105/111 (95%), Gaps = 0/111 (0%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+ALF SD+++QFHWS+LKSVLLILSLLP+SQGIL+LWQMSDA+SQI+VGFIALSIFSA+
Sbjct  1    MKALFFSDEIHQFHWSMLKSVLLILSLLPLSQGILTLWQMSDATSQIMVGFIALSIFSAI  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSAT  111
            LILSFYSALKATV+K+  +Q+IS +EQVI SIY Y+PMLSLAAMLSYL+AT
Sbjct  61   LILSFYSALKATVLKIVLEQQISNVEQVIVSIYRYVPMLSLAAMLSYLTAT  111


>A0A7T9UJ27 ABC transporter permease [Acinetobacter ursingii]
Length=112

 Score = 175 bits (443),  Expect = 3e-62
 Identities = 88/111 (79%), Positives = 105/111 (95%), Gaps = 0/111 (0%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+ALF SD+++QFHWS+LKSVLLILSLLP+SQGIL+LWQMSDA+SQI+VGFIALSIFSA+
Sbjct  1    MKALFFSDEIHQFHWSMLKSVLLILSLLPLSQGILTLWQMSDATSQIMVGFIALSIFSAI  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSAT  111
            LILSFYSALKATV+K+  +Q+IS +EQVI SIY Y+PMLSLAAMLSYL+AT
Sbjct  61   LILSFYSALKATVLKIVLEQQISNVEQVIVSIYRYVPMLSLAAMLSYLTAT  111


>A0A3D2SQZ2 ABC transporter permease [Acinetobacter ursingii]
Length=112

 Score = 174 bits (440),  Expect = 9e-62
 Identities = 87/111 (78%), Positives = 104/111 (94%), Gaps = 0/111 (0%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+ALF SD+++QFHWS+LKSVLLILSLLP+SQGIL+LWQMSDA+SQI+VGFIALSIFSA+
Sbjct  1    MKALFFSDEIHQFHWSMLKSVLLILSLLPLSQGILALWQMSDATSQIMVGFIALSIFSAI  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSAT  111
            LILSFYSALKATV+K+  +Q+IS +EQ I SIY Y+PMLSLAAMLSYL+AT
Sbjct  61   LILSFYSALKATVLKIVLEQQISNIEQAIVSIYRYVPMLSLAAMLSYLTAT  111


>A0A3F3L9B8 ABC transporter permease [Acinetobacter ursingii]
Length=112

 Score = 173 bits (439),  Expect = 1e-61
 Identities = 87/111 (78%), Positives = 104/111 (94%), Gaps = 0/111 (0%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+ALF SD+++QFHWS+LKSVLLILSLLP+SQGIL+LWQMSDA+SQI+VGFIALSIFSA+
Sbjct  1    MKALFFSDEIHQFHWSMLKSVLLILSLLPLSQGILTLWQMSDATSQIMVGFIALSIFSAI  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSAT  111
            LILSFYSALKATV+K+  +Q+IS +EQ I SIY Y+PMLSLAAMLSYL+AT
Sbjct  61   LILSFYSALKATVLKIVLEQQISNVEQAIVSIYRYVPMLSLAAMLSYLTAT  111


>N9DES9 ABC transmembrane type-1 domain-containing protein [Acinetobacter 
ursingii ANC 3649]
Length=112

 Score = 173 bits (439),  Expect = 1e-61
 Identities = 87/111 (78%), Positives = 104/111 (94%), Gaps = 0/111 (0%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+ALF SD+++QFHWS+LKSVLLILSLLP+SQGIL+LWQMSDA+SQI+VGFIALSIFSA+
Sbjct  1    MKALFFSDEIHQFHWSMLKSVLLILSLLPLSQGILTLWQMSDATSQIMVGFIALSIFSAI  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSAT  111
            LILSFYSALKATV+K+  +Q+IS +EQ I SIY Y+PMLSLAAMLSYL+AT
Sbjct  61   LILSFYSALKATVLKIVLEQQISNVEQAIVSIYRYVPMLSLAAMLSYLTAT  111


>A0A3A8ENR5 ABC transporter permease [Acinetobacter guerrae]
Length=112

 Score = 164 bits (416),  Expect = 4e-58
 Identities = 79/111 (71%), Positives = 101/111 (91%), Gaps = 0/111 (0%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+ALF  D+++QFHWS+LKS+LLILSLLP+SQGIL++WQMSDA+SQI+VGFIALS+FSA+
Sbjct  1    MKALFFLDEIHQFHWSMLKSILLILSLLPLSQGILAIWQMSDATSQIMVGFIALSLFSAI  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSAT  111
            LILSFYSALKATV+K+  +++IS  EQ + SIY Y+PMLSLA M+SYL+AT
Sbjct  61   LILSFYSALKATVLKVVVEEQISNFEQTVVSIYRYVPMLSLAVMVSYLTAT  111


>A0A7S8XKT9 Transporter [Acinetobacter sp. TTH0-4]
Length=111

 Score = 144 bits (363),  Expect = 5e-50
 Identities = 70/108 (65%), Positives = 93/108 (86%), Gaps = 1/108 (1%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+AL LSD++NQFHW++LKS+LLILSLLP++QGIL+LW  ++ SSQI+VGF ALS+FSA+
Sbjct  1    MKALILSDEINQFHWAMLKSILLILSLLPMAQGILTLWNATEGSSQIMVGFFALSVFSAM  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYL  108
             +L F+SAL+ATV+KL  Q +IS +E V+  IYGY+PML LA+MLSYL
Sbjct  61   SVLCFWSALQATVLKLK-QPQISAIEHVVVKIYGYIPMLFLASMLSYL  107


>A0A6L6GCT8 Uncharacterized protein [Acinetobacter faecalis]
Length=111

 Score = 144 bits (362),  Expect = 7e-50
 Identities = 72/110 (65%), Positives = 93/110 (85%), Gaps = 1/110 (1%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+AL LSD++N FHWSVLKSVLLILS+LP+SQGIL +WQ ++ SSQI+VGF ALS+ S++
Sbjct  1    MKALILSDEINLFHWSVLKSVLLILSILPLSQGILHVWQSTEGSSQIMVGFFALSLLSSL  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYLSA  110
             ILSF+SAL+ATV+KL  QQEI+  EQ +  +Y Y+PM+SLAAM+SYL A
Sbjct  61   FILSFWSALQATVLKLK-QQEITAFEQRMIGLYSYVPMISLAAMMSYLVA  109


>A0A241VD69 Uncharacterized protein [Acinetobacter sp. ANC 4218]
Length=111

 Score = 144 bits (362),  Expect = 7e-50
 Identities = 71/108 (66%), Positives = 91/108 (84%), Gaps = 1/108 (1%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+AL +SD++NQFHW++LKSVLLILSLLPISQGILSLW  ++ SSQI+VGF A+S+FS +
Sbjct  1    MKALIVSDEINQFHWAMLKSVLLILSLLPISQGILSLWNATEGSSQIMVGFFAISVFSTL  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYL  108
             +L F+SALKATV+ L  QQ+ STLEQ +  +Y Y+PML LAAM+SYL
Sbjct  61   FVLCFWSALKATVLNLK-QQQSSTLEQGVVKVYRYMPMLFLAAMMSYL  107


>A0A7T7R7D2 Uncharacterized protein [Acinetobacter sp. CS-2]
Length=111

 Score = 144 bits (362),  Expect = 7e-50
 Identities = 71/108 (66%), Positives = 91/108 (84%), Gaps = 1/108 (1%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+AL +SD++NQFHW++LKSVLLILSLLPISQGILSLW  ++ SSQI+VGF A+S+FS +
Sbjct  1    MKALIVSDEINQFHWAMLKSVLLILSLLPISQGILSLWNATEGSSQIMVGFFAISVFSTL  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYL  108
             +L F+SALKATV+ L  QQ+ STLEQ +  +Y Y+PML LAAM+SYL
Sbjct  61   FVLCFWSALKATVLNLK-QQQSSTLEQGVVKVYRYMPMLFLAAMMSYL  107


>A0A4V2LSD8 Uncharacterized protein [Acinetobacter sp. ANC 3781]
Length=111

 Score = 144 bits (362),  Expect = 7e-50
 Identities = 72/108 (67%), Positives = 91/108 (84%), Gaps = 1/108 (1%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+AL +SD++NQFHW++LKSVLLILSLLPISQGILSLW  ++ SSQI+VGF A+S+FSA+
Sbjct  1    MKALIISDEINQFHWAMLKSVLLILSLLPISQGILSLWHATEGSSQIMVGFFAISLFSAL  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYL  108
             IL F+SALK TV+KL  QQ+IS LEQ   ++Y Y+PML L AM+SYL
Sbjct  61   FILCFWSALKTTVLKLK-QQQISALEQGAVNVYRYIPMLFLTAMMSYL  107


>A0A1A7RCG6 Uncharacterized protein [Acinetobacter gandensis]
Length=111

 Score = 144 bits (362),  Expect = 7e-50
 Identities = 73/108 (68%), Positives = 92/108 (85%), Gaps = 1/108 (1%)

Query  1    MRALFLSDDVNQFHWSVLKSVLLILSLLPISQGILSLWQMSDASSQIIVGFIALSIFSAV  60
            M+AL L+D++NQFHWS+LKSVLLILS+LP+SQGI+ LWQ ++ SSQI+VGF A+S+ S++
Sbjct  1    MKALLLTDEINQFHWSMLKSVLLILSILPLSQGIVHLWQSTEGSSQIMVGFFAISLMSSL  60

Query  61   LILSFYSALKATVMKLNAQQEISTLEQVIFSIYGYLPMLSLAAMLSYL  108
            L LSF+SALKATV  LN +Q  S LEQVI  IY Y+PMLSLAAM+SYL
Sbjct  61   LALSFWSALKATVATLN-EQHHSALEQVIVRIYRYIPMLSLAAMMSYL  107



Lambda      K        H        a         alpha
   0.332    0.138    0.398    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 104076


  Database: fd8f5ef72a768cbbe75336d43651d741.TrEMBL.fasta
    Posted date:  May 30, 2024  5:23 PM
  Number of letters in database: 1,674
  Number of sequences in database:  15



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40