Comparative Genomics

ACIAD0424 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 28876ca97f7aa1819bf5a325f312e5f9.TrEMBL.fasta
           14 sequences; 1,541 total letters



Query= ACIAD0424

Length=111
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2SJ82 HopJ type III effector protein [Acinetobacter sp]          222     4e-81
Q6FEZ2 Putative type III effector HopPmaJ [Acinetobacter baylyi (...  222     4e-81
A0A009ZTL8 HopJ type III effector family protein [Acinetobacter s...  195     2e-70
A0A7T9UJ76 HopJ type III effector protein [Acinetobacter ursingii]    195     2e-70
N9C6N6 HopJ type III effector protein [Acinetobacter ursingii ANC...  192     5e-69
A0A3D2SMA7 HopJ type III effector protein [Acinetobacter ursingii]    191     7e-69
A0A3R9DDN1 HopJ type III effector protein [Acinetobacter sp. FDAA...  191     1e-68
A0A3A8EHQ7 HopJ type III effector protein [Acinetobacter guerrae]     191     1e-68
A0A3F3L8Y8 HopJ type III effector protein [Acinetobacter ursingii]    190     2e-68
A0A0M1I3K4 HopJ type III effector protein [Acinetobacter sp. C15]     188     2e-67
A0A3R9BBF5 HopJ type III effector protein [Acinetobacter soli]        188     2e-67
A0A1P8EM13 HopJ type III effector protein [Acinetobacter soli]        187     2e-67
N9AJU1 HopJ type III effector protein [Acinetobacter soli NIPH 2899]  186     7e-67
D5HKL5 Putative HopPmaJ type III effector [Capnocytophaga sputigena]  94.4    2e-30


>A0A7G2SJ82 HopJ type III effector protein [Acinetobacter sp]
Length=110

 Score = 222 bits (566),  Expect = 4e-81
 Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG
Sbjct  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK
Sbjct  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110


>Q6FEZ2 Putative type III effector HopPmaJ [Acinetobacter baylyi 
(strain ATCC 33305 / BD413 / ADP1)]
Length=110

 Score = 222 bits (566),  Expect = 4e-81
 Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG
Sbjct  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK
Sbjct  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110


>A0A009ZTL8 HopJ type III effector family protein [Acinetobacter 
sp. 479375]
Length=110

 Score = 195 bits (496),  Expect = 2e-70
 Identities = 95/110 (86%), Positives = 102/110 (93%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            MV ELL+QLQNGEAKFADVLA+IE+RFEH PTAFKNGQQ NAATENQGSAKVFS AQIEG
Sbjct  1    MVHELLQQLQNGEAKFADVLAHIEARFEHHPTAFKNGQQHNAATENQGSAKVFSFAQIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            L+Q +TLSLFAEHYA+VL TPE TDHQNIRQFMQHGWDGVTFEG+AL AK
Sbjct  61   LDQAQTLSLFAEHYASVLATPESTDHQNIRQFMQHGWDGVTFEGQALTAK  110


>A0A7T9UJ76 HopJ type III effector protein [Acinetobacter ursingii]
Length=110

 Score = 195 bits (496),  Expect = 2e-70
 Identities = 95/110 (86%), Positives = 102/110 (93%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            MV ELL+QLQNGEAKFADVLA+IE+RFEH PTAFKNGQQ NAATENQGSAKVFS AQIEG
Sbjct  1    MVHELLQQLQNGEAKFADVLAHIEARFEHHPTAFKNGQQHNAATENQGSAKVFSFAQIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            L+Q +TLSLFAEHYA+VL TPE TDHQNIRQFMQHGWDGVTFEG+AL AK
Sbjct  61   LDQAQTLSLFAEHYASVLATPESTDHQNIRQFMQHGWDGVTFEGQALTAK  110


>N9C6N6 HopJ type III effector protein [Acinetobacter ursingii 
ANC 3649]
Length=110

 Score = 192 bits (487),  Expect = 5e-69
 Identities = 93/110 (85%), Positives = 102/110 (93%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            MV +LL+QLQNGEAKFADVLA+IE+RFEHQPTAFKNGQQ NAATENQGSAKV S A+IEG
Sbjct  1    MVHKLLQQLQNGEAKFADVLAHIEARFEHQPTAFKNGQQHNAATENQGSAKVLSFAKIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            L+Q +TLSLFAEHYA+VL TPE TDHQNIRQFMQHGWDGVTFEG+AL AK
Sbjct  61   LDQVQTLSLFAEHYASVLATPESTDHQNIRQFMQHGWDGVTFEGQALTAK  110


>A0A3D2SMA7 HopJ type III effector protein [Acinetobacter ursingii]
Length=110

 Score = 191 bits (486),  Expect = 7e-69
 Identities = 93/110 (85%), Positives = 101/110 (92%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            MV ELL+QLQNGEAKFADVLA+IE+RFEH PTAFKNGQQ NAATENQGSAKV S A+IEG
Sbjct  1    MVHELLQQLQNGEAKFADVLAHIEARFEHHPTAFKNGQQYNAATENQGSAKVLSFAKIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            L+Q +TLSLFAEHYA+VL TPEG DHQNIRQFMQHGWDGVTFEG+AL AK
Sbjct  61   LDQAQTLSLFAEHYASVLATPEGADHQNIRQFMQHGWDGVTFEGQALTAK  110


>A0A3R9DDN1 HopJ type III effector protein [Acinetobacter sp. 
FDAARGOS_515]
Length=110

 Score = 191 bits (485),  Expect = 1e-68
 Identities = 92/110 (84%), Positives = 101/110 (92%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            MV ELL+QLQNGEAKFADVLA+IE+RFEHQPTAFKNGQQ NA TENQGSAKV S A+IEG
Sbjct  1    MVHELLQQLQNGEAKFADVLAHIEARFEHQPTAFKNGQQHNATTENQGSAKVLSFAKIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            L+Q +TL+LFAEHYA+VL TPEG DHQNIRQFMQHGWDGVTFEG+AL AK
Sbjct  61   LDQAQTLNLFAEHYASVLATPEGADHQNIRQFMQHGWDGVTFEGQALTAK  110


>A0A3A8EHQ7 HopJ type III effector protein [Acinetobacter guerrae]
Length=110

 Score = 191 bits (485),  Expect = 1e-68
 Identities = 94/110 (85%), Positives = 101/110 (92%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            MVQELL QLQ+GEAKFADVLAYIE+RFEH  TAFKNGQQ NAATENQGSAKVFS A+IEG
Sbjct  1    MVQELLNQLQHGEAKFADVLAYIEARFEHTATAFKNGQQHNAATENQGSAKVFSFAKIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            L+Q +TLSLFAEHYAAV+ TPEGTDHQNIRQFMQHGWDGVTFE +AL AK
Sbjct  61   LDQAQTLSLFAEHYAAVVATPEGTDHQNIRQFMQHGWDGVTFEHQALTAK  110


>A0A3F3L8Y8 HopJ type III effector protein [Acinetobacter ursingii]
Length=110

 Score = 190 bits (483),  Expect = 2e-68
 Identities = 92/110 (84%), Positives = 101/110 (92%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            MV ELL+QLQNGEAKFADVLA+IE+RFEH PTAFKNGQQ NAATENQGSAKV S A+IEG
Sbjct  1    MVHELLQQLQNGEAKFADVLAHIEARFEHHPTAFKNGQQHNAATENQGSAKVLSFAKIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            L+Q +TL+LFAEHYA+VL TPE TDHQNIRQFMQHGWDGVTFEG+AL AK
Sbjct  61   LDQAQTLNLFAEHYASVLATPESTDHQNIRQFMQHGWDGVTFEGQALTAK  110


>A0A0M1I3K4 HopJ type III effector protein [Acinetobacter sp. 
C15]
Length=110

 Score = 188 bits (477),  Expect = 2e-67
 Identities = 92/110 (84%), Positives = 99/110 (90%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            M Q LL+QLQNGEAKFADVLA+IE+ F H PTAF+NG Q NAATENQGSAKV S A+IEG
Sbjct  1    MSQALLQQLQNGEAKFADVLAHIEAHFVHTPTAFQNGAQSNAATENQGSAKVLSYAKIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            LNQ +TLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGV FEG+ALQAK
Sbjct  61   LNQADTLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVAFEGKALQAK  110


>A0A3R9BBF5 HopJ type III effector protein [Acinetobacter soli]
Length=110

 Score = 188 bits (477),  Expect = 2e-67
 Identities = 92/110 (84%), Positives = 99/110 (90%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            M Q LL+QLQNGEAKFADVLA+IE+ F H PTAF+NG Q NAATENQGSAKV S A+IEG
Sbjct  1    MSQALLQQLQNGEAKFADVLAHIEAHFVHTPTAFQNGAQSNAATENQGSAKVLSYAKIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            LNQ +TLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGV FEG+ALQAK
Sbjct  61   LNQADTLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVAFEGKALQAK  110


>A0A1P8EM13 HopJ type III effector protein [Acinetobacter soli]
Length=110

 Score = 187 bits (476),  Expect = 2e-67
 Identities = 92/110 (84%), Positives = 99/110 (90%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            M Q LL+QLQNGEAKFADVLA+IE+ F H PTAF+NG Q NAATENQGSAKV S A+IEG
Sbjct  1    MSQALLQQLQNGEAKFADVLAHIEAHFVHIPTAFQNGAQSNAATENQGSAKVLSYAKIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            LNQ +TLSLFAEHY+AVLNTPEGTDHQNIRQFMQHGWDGV FEGEALQAK
Sbjct  61   LNQADTLSLFAEHYSAVLNTPEGTDHQNIRQFMQHGWDGVAFEGEALQAK  110


>N9AJU1 HopJ type III effector protein [Acinetobacter soli NIPH 
2899]
Length=110

 Score = 186 bits (473),  Expect = 7e-67
 Identities = 91/110 (83%), Positives = 98/110 (89%), Gaps = 0/110 (0%)

Query  1    MVQELLKQLQNGEAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEG  60
            M Q LL+QLQNGEAKFADVLA+IE+ F H PTAF+NG Q NAATENQGSAKV S A+IEG
Sbjct  1    MSQALLQQLQNGEAKFADVLAHIEAHFVHTPTAFQNGAQSNAATENQGSAKVLSYAKIEG  60

Query  61   LNQTETLSLFAEHYAAVLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
            LNQ +TLSLFAEHY AVLNTPEGTDHQNIRQFMQHGWDGV FEG+ALQAK
Sbjct  61   LNQADTLSLFAEHYTAVLNTPEGTDHQNIRQFMQHGWDGVAFEGKALQAK  110


>D5HKL5 Putative HopPmaJ type III effector [Capnocytophaga sputigena]
Length=111

 Score = 94.4 bits (233),  Expect = 2e-30
 Identities = 46/99 (46%), Positives = 64/99 (65%), Gaps = 1/99 (1%)

Query  13   EAKFADVLAYIESRFEHQPTAFKNGQQQNAATENQGSAKVFSLAQIEGLNQTETLSLFAE  72
            E  F +V+AYI+  ++  PTAF+NG+  N   +N GS K+FS A+  GLN+  TL LF +
Sbjct  13   EISFDEVIAYIDEHYDFVPTAFQNGEVLNEENQNNGSCKIFSFAKKLGLNEKNTLFLFGD  72

Query  73   HYAA-VLNTPEGTDHQNIRQFMQHGWDGVTFEGEALQAK  110
             Y   VL   +GT+HQNIR FM+ GW+G+ F  E+L  K
Sbjct  73   FYRKDVLGDLQGTNHQNIRNFMKTGWEGIKFHRESLIEK  111



Lambda      K        H        a         alpha
   0.319    0.131    0.374    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 95367


  Database: 28876ca97f7aa1819bf5a325f312e5f9.TrEMBL.fasta
    Posted date:  May 30, 2024  7:07 AM
  Number of letters in database: 1,541
  Number of sequences in database:  14



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40