BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e9862ed77c8dba38c701d00a300970d3.SwissProt.fasta
12 sequences; 3,588 total letters
Query= ACIAD0448
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
Q47141 Hca operon transcriptional activator HcaR [Escherichia col... 201 1e-66
Q04778 HTH-type transcriptional regulator AlsR [Bacillus subtilis... 180 1e-58
P77559 Uncharacterized HTH-type transcriptional regulator YnfL [E... 141 1e-43
P20667 HTH-type transcriptional regulator CatR [Pseudomonas putida] 141 1e-43
O68014 HTH-type transcriptional regulator BenM [Acinetobacter bay... 133 2e-40
O33945 Probable cat1 operon transcriptional activator [Acinetobac... 132 4e-40
P52669 HTH-type transcriptional regulator TtuA [Agrobacterium vitis] 118 7e-35
P07774 HTH-type transcriptional regulator CatM [Acinetobacter bay... 118 1e-34
P52666 HTH-type transcriptional regulator BudR [Raoultella terrig... 116 3e-34
P23841 HTH-type transcriptional regulator XapR [Escherichia coli ... 114 2e-33
P0ACQ4 Hydrogen peroxide-inducible genes activator [Escherichia c... 110 1e-31
P44418 Hydrogen peroxide-inducible genes activator [Haemophilus i... 109 2e-31
>Q47141 Hca operon transcriptional activator HcaR [Escherichia
coli (strain K12)]
Length=296
Score = 201 bits (510), Expect = 1e-66
Identities = 119/286 (42%), Positives = 166/286 (58%), Gaps = 2/286 (1%)
Query 1 VELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYRTKRKVELTEE 60
+ELRHLRYFV VA+ LNF++AA KL+T+QPSLS QI+DLE VGV LL R KRKV LT
Sbjct 1 MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60
Query 61 GAVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPVAEVQVFPHVLPNFRAHHPEL 120
G FL+ A L QA+ A + ARK+ Q +Q L IGFVP AEV + P VLP FR P+
Sbjct 61 GECFLQDALAILEQAENAKLRARKIVQEDRQ-LTIGFVPSAEVNLLPKVLPMFRLRQPDT 119
Query 121 RIELHSLNNDQQLKALKRGELDLCFIRDNIQHRDGIHSQLVLSEPLIFILPKQHPLAKLE 180
IEL SL QQ + ++RGELD+ +R + + + +L EPL+ +LP HPLA +
Sbjct 120 LIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLEL-FDEPLVVVLPVDHPLAHEK 178
Query 181 RIPLEALNNIDFIIPAADQARVLNQHILQFAKQHQIQFNIIQSADTVLSNITSVALNLGC 240
I L+ ++F+ + L + + Q Q NI+Q A +L + V + LG
Sbjct 179 EITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGV 238
Query 241 SILPNYVSTLLPENCVMRPLDIELPHFDLFMAYQSASKTPPVTTFI 286
+++P Y++ V RP+ +P L MA++ P + FI
Sbjct 239 TLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFI 284
>Q04778 HTH-type transcriptional regulator AlsR [Bacillus subtilis
(strain 168)]
Length=302
Score = 180 bits (457), Expect = 1e-58
Identities = 103/286 (36%), Positives = 158/286 (55%), Gaps = 1/286 (0%)
Query 1 VELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYRTKRKVELTEE 60
+ELRHL+YF+ VAEEL+F KAA +L QP LSQQIK LEE+VGV LL RTKR VELT
Sbjct 1 MELRHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKRTKRFVELTAA 60
Query 61 GAVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPVAEVQVFPHVLPNFRAHHPEL 120
G +FL R+ L Q + + +A++ ++ +Q L IGFV A + P ++ +R P +
Sbjct 61 GEIFLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGSATYEFLPPIVREYRKKFPSV 120
Query 121 RIELHSLNNDQQLKALKRGELDLCFIRDNIQHRDGIHSQLVLSEPLIFILPKQHPLAKLE 180
+IEL +++ +Q + L +G +D+ + +QH +H + S P + LPKQHPL E
Sbjct 121 KIELREISSSRQQEELLKGNIDIGILHPPLQH-TALHIETAQSSPCVLALPKQHPLTSKE 179
Query 181 RIPLEALNNIDFIIPAADQARVLNQHILQFAKQHQIQFNIIQSADTVLSNITSVALNLGC 240
I +E L + I A + L +QF +Q + NI+Q A I V+ +G
Sbjct 180 SITIEDLRDEPIITVAKEAWPTLYMDFIQFCEQAGFRPNIVQEATEYQMVIGLVSAGIGM 239
Query 241 SILPNYVSTLLPENCVMRPLDIELPHFDLFMAYQSASKTPPVTTFI 286
+ +P+ L + R +D + + +AY+ + P + FI
Sbjct 240 TFVPSSAKKLFNLDVTYRKMDQIQLNAEWVIAYRKDNHNPLIKHFI 285
>P77559 Uncharacterized HTH-type transcriptional regulator YnfL
[Escherichia coli (strain K12)]
Length=297
Score = 141 bits (356), Expect = 1e-43
Identities = 87/245 (36%), Positives = 130/245 (53%), Gaps = 2/245 (1%)
Query 1 VELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYRTKRKVELTEE 60
+ELRHLRYFV VAEEL+F +AA +L +QP LSQQI+ LE+ +G +LL RT R V LT
Sbjct 3 IELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLTAA 62
Query 61 GAVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPVAE-VQVFPHVLPNFRAHHPE 119
G FL +R L+ D A A ++ Q + LRIGF A ++ L FR +P+
Sbjct 63 GKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDYPD 122
Query 120 LRIELHSLNNDQQLKALKRGELDLCFIRDNIQHRDGIHSQLVLSEPLIFILPKQHPLAKL 179
+ ++ +N +Q+ L G LD+ +R N + + +++ EPL+ ++P HPLA
Sbjct 123 VHLQTREMNTREQIAPLIEGTLDMGLLR-NTALPESLEHAVIVHEPLMAMIPHDHPLANN 181
Query 180 ERIPLEALNNIDFIIPAADQARVLNQHILQFAKQHQIQFNIIQSADTVLSNITSVALNLG 239
+ L L F+ L IL +++ + I Q ++ I V+ LG
Sbjct 182 PNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGLG 241
Query 240 CSILP 244
SILP
Sbjct 242 VSILP 246
Score = 16.9 bits (32), Expect = 6.8
Identities = 12/43 (28%), Positives = 24/43 (56%), Gaps = 11/43 (26%)
Query 260 LDIELPHFDLFMAY-------QSASK----TPPVTTFIKALDK 291
++IEL H F+A ++A++ PP++ I+AL++
Sbjct 1 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQ 43
>P20667 HTH-type transcriptional regulator CatR [Pseudomonas putida]
Length=289
Score = 141 bits (355), Expect = 1e-43
Identities = 89/244 (36%), Positives = 136/244 (56%), Gaps = 5/244 (2%)
Query 1 VELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYRTKRKVELTEE 60
+ELRHLRYF +AE LNF++AA L+ AQP LS+QI LE+ +G L+ R +R + LTE
Sbjct 1 MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVR-ERPLRLTEA 59
Query 61 GAVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPVAEVQVFPHVLPNFRAHHPEL 120
G F EQ+ T+ Q R++ Q ++Q L IGF P +V P ++ R EL
Sbjct 60 GRFFYEQS-CTVLQLQNISDNTRRIGQGQRQWLGIGFAPSTLYKVLPELIRELR-QDSEL 117
Query 121 RIELHSLNNDQQLKALKRGELDLCFIRDNIQHRDGIHSQLVLSEPLIFILPKQHPLAKLE 180
+ L+ + QQ++ALK G +D+ F R I IH Q++ +PL+ +LPK HPLA
Sbjct 118 ELGLNEMTTLQQVEALKSGRIDIAFGRIRIDD-PAIHQQVLCEDPLVAVLPKDHPLAS-S 175
Query 181 RIPLEALNNIDFIIPAADQARVLNQHILQFAKQHQIQFNIIQSADTVLSNITSVALNLGC 240
+ L L FI+ A+ H+L H + ++ Q A+ + + I VA+ +G
Sbjct 176 PLTLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIHVSQWANELQTAIGLVAVGVGV 235
Query 241 SILP 244
+++P
Sbjct 236 TLVP 239
>O68014 HTH-type transcriptional regulator BenM [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=304
Score = 133 bits (335), Expect = 2e-40
Identities = 89/263 (34%), Positives = 140/263 (53%), Gaps = 6/263 (2%)
Query 1 VELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYRTKRKVELTEE 60
+ELRHLRYFV V EE +F+KAA KL AQP LS+QI++LEE++G+QLL R R V+ T E
Sbjct 1 MELRHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLERGSRPVKTTPE 60
Query 61 GAVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPVAEVQVFPHVLPNFRAHHPEL 120
G F + A L+ D+ V M ++++ ++ +RIGFV + P ++ +R HP L
Sbjct 61 GHFFYQYAIKLLSNVDQMVSMTKRIASV-EKTIRIGFVGSLLFGLLPRIIHLYRQAHPNL 119
Query 121 RIELHSLNNDQQLKALKRGELDLCFIRDNIQHRDGIHSQLVLSEPLIFILPKQHPLAKLE 180
RIEL+ + Q +ALK G +D F R I I L+ +E L+ + HPL +++
Sbjct 120 RIELYEMGTKAQTEALKEGRIDAGFGRLKISD-PAIKRTLLRNERLMVAVHASHPLNQMK 178
Query 181 RIPLEALNNID---FIIPAADQARVLNQHILQFAKQHQIQFNIIQSADTVLSNITSVALN 237
+ + ID + P++ + + H++ H ++ I V + VA
Sbjct 179 DKGVHLNDLIDEKILLYPSSPKPN-FSTHVMNIFSDHGLEPTKINEVREVQLALGLVAAG 237
Query 238 LGCSILPNYVSTLLPENCVMRPL 260
G S++P ++ N PL
Sbjct 238 EGISLVPASTQSIQLFNLSYVPL 260
Score = 18.9 bits (37), Expect = 1.7
Identities = 6/20 (30%), Positives = 13/20 (65%), Gaps = 0/20 (0%)
Query 36 IKDLEEDVGVQLLYRTKRKV 55
++++EE + LY T R++
Sbjct 273 VRNMEESTYIYSLYETIRQI 292
>O33945 Probable cat1 operon transcriptional activator [Acinetobacter
lwoffii]
Length=303
Score = 132 bits (332), Expect = 4e-40
Identities = 84/246 (34%), Positives = 129/246 (52%), Gaps = 4/246 (2%)
Query 1 VELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYRTKRKVELTEE 60
++LR RYFV VA E NF++AA +L AQP LS+QI+ LEE+VGV LL R R V+LT+
Sbjct 1 MDLRQFRYFVAVARERNFTRAARQLNIAQPPLSRQIQLLEEEVGVPLLIRNSRPVQLTDA 60
Query 61 GAVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPVAEVQVFPHVLPNFRAHHPEL 120
G +F EQA L + ++ R+V ++ L IGFV V P ++ R H PEL
Sbjct 61 GRLFFEQAIQVLGRVEQMQAATRRVGLHQRSVLSIGFVASTLYGVLPTLMRKLRQHAPEL 120
Query 121 RIELHSLNNDQQLKALKRGELDLCFIRDNIQHRDGIHSQLVL-SEPLIFILPKQHPLAKL 179
I++ L + QQ++A+ G +D+ F R + H D S +VL E L LP + P+A+
Sbjct 121 DIQMVELMSVQQIQAINEGRIDIGFGR--VHHSDPNVSSIVLHEERLAVALPMESPMARE 178
Query 180 ER-IPLEALNNIDFIIPAADQARVLNQHILQFAKQHQIQFNIIQSADTVLSNITSVALNL 238
+P+ L I+ + +L +H +Q + + + + VA
Sbjct 179 STPLPVHQLAGEKLIVYPKEPRPGFADQVLNILDRHDVQPGQVMEVREIQTALGLVAAEF 238
Query 239 GCSILP 244
G ++P
Sbjct 239 GVCVIP 244
>P52669 HTH-type transcriptional regulator TtuA [Agrobacterium
vitis]
Length=304
Score = 118 bits (296), Expect = 7e-35
Identities = 90/298 (30%), Positives = 137/298 (46%), Gaps = 12/298 (4%)
Query 1 VELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYRTKRKVELTEE 60
+EL L+ FV AEEL+F +AA K+ SL + ++ LEE +G +L+ RT R V LTE+
Sbjct 1 MELEQLKCFVAAAEELHFGRAAQKMGILPASLGRHLRLLEESLGTRLMSRTTRSVALTED 60
Query 61 GAVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPVAEVQVFPHVLPNFRAHHPEL 120
G LE+ R L + R + LRIG + A + P +L +FR P +
Sbjct 61 GVALLEEVRPLLHRLQTLAEEFRSRKTQQATVLRIGAIDSAAAGLIPPLLHDFRERFPGI 120
Query 121 RIELHSLNNDQQLKALKRGELDLCFIRDNIQHRDGIHSQLVL----SEPLIFILPKQHPL 176
+L + + + L G LD+ FIR RDG++ LV+ E + LP HPL
Sbjct 121 ITQLVEDKSIRLIPKLIAGRLDIVFIRP----RDGLNRNLVVRTLTQETPVIALPVTHPL 176
Query 177 AKLERIPLEALNNIDFIIPAADQARVLNQHILQFAKQHQIQFNIIQSADTVLSNITSVAL 236
A ERI ++ L I+P ++ + + I Q+AD + I VA
Sbjct 177 ANRERISVDELREEPLIVPERRSRPHSYDLTMKLFEDAGLHPRIAQTADEKQTIINLVAA 236
Query 237 NLGCSILPNYVSTLLPENCVMRPL----DIELPHFDLFMAYQSASKTPPVTTFIKALD 290
+G +I+P + + L PL I L L A+ A + P ++ LD
Sbjct 237 GIGSAIVPRWTAKLAVFGVTFVPLMTVGGISLRKLPLAAAWAKAVRDPGRDQLLELLD 294
>P07774 HTH-type transcriptional regulator CatM [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=303
Score = 118 bits (295), Expect = 1e-34
Identities = 74/202 (37%), Positives = 107/202 (53%), Gaps = 28/202 (14%)
Query 1 VELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYRTKRKVELTEE 60
+ELRHLRYFVTV EE + SKAA KL AQP LS+QI+ LEE++G+QL R R ++TE
Sbjct 1 MELRHLRYFVTVVEEQSISKAAEKLCIAQPPLSRQIQKLEEELGIQLFERGFRPAKVTEA 60
Query 61 GAVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPVAEVQVFPHVLPNFRAHHPEL 120
G F + A L +A MA++++ Q LRIG+V + P ++ FR +PE+
Sbjct 61 GMFFYQHAVQILTHTAQASSMAKRIATV-SQTLRIGYVSSLLYGLLPEIIYLFRQQNPEI 119
Query 121 RIELHSLNNDQQLKALKRGELDLCF---------IRDNIQHRD----------------- 154
IEL Q+ ALK+G++DL F IR + H++
Sbjct 120 HIELIECGTKDQINALKQGKIDLGFGRLKITDPAIRRIVLHKEQLKLAIHKHHHLNQFAA 179
Query 155 -GIHSQLVLSEPLIFILPKQHP 175
G+H ++ EP++ Q P
Sbjct 180 TGVHLSQIIDEPMLLYPVSQKP 201
>P52666 HTH-type transcriptional regulator BudR [Raoultella terrigena]
Length=290
Score = 116 bits (291), Expect = 3e-34
Identities = 80/289 (28%), Positives = 143/289 (49%), Gaps = 3/289 (1%)
Query 1 VELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYRTKRKVELTEE 60
+ELR+LRYFV VAE NF++AA L +QP LSQQI+ LE ++G LL R R VELTE
Sbjct 1 MELRYLRYFVAVAEARNFTRAAHDLGISQPPLSQQIQRLEREIGTPLLRRLTRGVELTEA 60
Query 61 GAVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPVA--EVQVFPHVLPNFRAHHP 118
G F A LA +D A+ + +++ L G A Q+F +L F+ +P
Sbjct 61 GESFYVDACQILALSDAALEKTKGIARGMNGSLVPGITSSAAFHSQIF-SLLYQFQQRYP 119
Query 119 ELRIELHSLNNDQQLKALKRGELDLCFIRDNIQHRDGIHSQLVLSEPLIFILPKQHPLAK 178
+ + N + AL ELD+ F+R + + +++ EP++ L + HPL+
Sbjct 120 AVALRQVEGNMATLMHALGEAELDIAFVRLPCESSKAFNLRIIAEEPMVIALHRSHPLSG 179
Query 179 LERIPLEALNNIDFIIPAADQARVLNQHILQFAKQHQIQFNIIQSADTVLSNITSVALNL 238
+ L L++ +I + A L + + ++ + + + + + S+I+ V
Sbjct 180 ESALSLAQLSDAVPVIFPPEVAPGLYEQVYDGCRRAGVDMSRARQSSQISSSISMVDAGF 239
Query 239 GCSILPNYVSTLLPENCVMRPLDIELPHFDLFMAYQSASKTPPVTTFIK 287
G +++P ++ + N PL ++ +A++ ++ V F++
Sbjct 240 GFALVPQSMTCICLPNVTWHPLQDASLKTEIAIAWRRFERSRTVKRFLE 288
>P23841 HTH-type transcriptional regulator XapR [Escherichia coli
(strain K12)]
Length=294
Score = 114 bits (285), Expect = 2e-33
Identities = 78/289 (27%), Positives = 137/289 (47%), Gaps = 5/289 (2%)
Query 2 ELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYRTKRKVELTEEG 61
+L+ LRYF+ VAEEL+F +AA +L +QP LS IK+LE +G QL R R V LT G
Sbjct 8 DLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKELENQLGTQLFIRHSRSVVLTHAG 67
Query 62 AVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPVAEVQVFPHVLPNFRAHHPELR 121
+ +E++R L A+ + ++ + + + +G V A V+ F +P +
Sbjct 68 KILMEESRRLLVNANNVLARIEQIGRGEAGRIELGVVGTAMWGRMRPVMRRFLRENPNVD 127
Query 122 IELHSLNNDQQLKALKRGELDLCFIRDNIQHRDGIHSQLVLSEPLIFILPKQHPLAKLER 181
+ Q+ L+R ELD R + G S + + +P++H L+
Sbjct 128 VLFREKMPAMQMALLERRELDAGIWRMATEPPTGFTSLRLHESAFLVAMPEEHHLSSFST 187
Query 182 IPLEALNNIDFI-IPAADQARVLNQHILQFAKQHQIQFNIIQSADTVLSNITSVALNLGC 240
+PLEAL + F+ +P Q + Q + + TVL+ V++ +G
Sbjct 188 VPLEALRDEYFVTMPPVYTDWDFLQRVCQQVGFSPVVIREVNEPQTVLA---MVSMGIGI 244
Query 241 SILPNYVSTLLPENCVMRPLDIELPHFDLFMAYQSASKTPPVTTFIKAL 289
+++ + + + + RPL +P DL++ Y++ TP + + AL
Sbjct 245 TLIADSYAQMNWPGVIFRPLKQRIP-ADLYIVYETQQVTPAMVKLLAAL 292
>P0ACQ4 Hydrogen peroxide-inducible genes activator [Escherichia
coli (strain K12)]
Length=305
Score = 110 bits (274), Expect = 1e-31
Identities = 61/187 (33%), Positives = 97/187 (52%), Gaps = 1/187 (1%)
Query 1 VELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYRTKRKVELTEE 60
+ +R L Y V +AE +F +AA + +QP+LS QI+ LE+++GV LL RT RKV T+
Sbjct 1 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60
Query 61 GAVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPVAEVQVFPHVLPNFRAHHPEL 120
G + ++QAR L + MA + + L IG +P + PH++P P+L
Sbjct 61 GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL 120
Query 121 RIELHSLNNDQQLKALKRGELDLCFIRDNIQHRDGIHSQLVLSEPLIFILPKQHPLAKLE 180
+ LH Q L L G+LD C I ++ + + EP++ + + HP A E
Sbjct 121 EMYLHEAQTHQLLAQLDSGKLD-CVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANRE 179
Query 181 RIPLEAL 187
+P+ L
Sbjct 180 CVPMADL 186
>P44418 Hydrogen peroxide-inducible genes activator [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=301
Score = 109 bits (272), Expect = 2e-31
Identities = 67/244 (27%), Positives = 119/244 (49%), Gaps = 3/244 (1%)
Query 1 VELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYRTKRKVELTEE 60
+ +R L Y V ++E +F +AA +QP+LS QI+ LE+++G+ LL RT RKV T+
Sbjct 1 MNIRDLEYLVALSEYKHFRRAADSCNVSQPTLSGQIRKLEDELGIILLERTSRKVLFTQS 60
Query 61 GAVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPVAEVQVFPHVLPNFRAHHPEL 120
G + ++QAR L + MA + L IG +P + P+++P +A P+L
Sbjct 61 GMLLVDQARTVLREVKLLKEMASNQGKEMTGPLHIGLIPTVGPYLLPYIVPMLKAAFPDL 120
Query 121 RIELHSLNNDQQLKALKRGELDLCFIRDNIQHRDGIHSQLVLSEPLIFILPKQHPLAKLE 180
+ L+ Q L+ L+ G LD C I + + + +E ++ + + HP A+
Sbjct 121 EVFLYEAQTHQLLEQLETGRLD-CAIVATVPETEAFIEVPIFNEKMLLAVSEHHPWAQES 179
Query 181 RIPLEALNNIDFIIPAADQARVLNQHILQFAKQHQIQFNIIQSADTVLSNITSVALNLGC 240
++P+ LN + ++ D L L + + N A ++ + VA N G
Sbjct 180 KLPMNQLNGQEMLM--LDDGHCLRNQALDYCFTAGAKENSHFQATSLETLRNMVAANAGI 237
Query 241 SILP 244
+ +P
Sbjct 238 TFMP 241
Lambda K H a alpha
0.325 0.138 0.401 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 786432
Database: e9862ed77c8dba38c701d00a300970d3.SwissProt.fasta
Posted date: May 19, 2024 10:46 PM
Number of letters in database: 3,588
Number of sequences in database: 12
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
