BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 77f8355fe1b403bacced7288a7e1ae14.SwissProt.fasta
           1 sequences; 140 total letters



Query= ACIAD0511

Length=116
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P52644 Heat shock protein HslJ [Escherichia coli (strain K12)]        37.0    7e-09


>P52644 Heat shock protein HslJ [Escherichia coli (strain K12)]
Length=140

 Score = 37.0 bits (84),  Expect = 7e-09
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 6/111 (5%)

Query  6    WIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAVATTKM  65
            ++   +NG    P  ++K   ++    K       CNR  G  +LS+ +L    +A T+M
Sbjct  35   FVLESVNG---KPVTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRM  91

Query  66   LCASADQN-LTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQSVN  115
            +CA+   N L     + L++  Q  ++   L L  +T    L + +A  +N
Sbjct  92   MCANPQLNELDNTISEMLKEGAQVDLTANQLTL--ATAKQTLTYKLADLMN  140



Lambda      K        H        a         alpha
   0.320    0.131    0.378    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 12852


  Database: 77f8355fe1b403bacced7288a7e1ae14.SwissProt.fasta
    Posted date:  May 9, 2024  4:50 PM
  Number of letters in database: 140
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40