Comparative Genomics

ACIAD0511 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: a78e69af8429bf0c1997b78358ed7f2a.TrEMBL.fasta
           12 sequences; 1,873 total letters



Query= ACIAD0511

Length=116
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FES1 DUF306 domain-containing protein [Acinetobacter baylyi (st...  229     1e-83
A0A7G2SGF6 DUF306 domain-containing protein [Acinetobacter sp]        230     4e-83
A0A0M1I4G8 DUF306 domain-containing protein [Acinetobacter sp. C15]   132     2e-44
N9BYR6 DUF306 domain-containing protein [Acinetobacter soli NIPH ...  132     2e-44
A0A1P8EM90 META domain-containing protein [Acinetobacter soli]        132     2e-44
N9C5W3 DUF306 domain-containing protein [Acinetobacter ursingii A...  124     3e-41
A0A3R9CTW3 META domain-containing protein [Acinetobacter sp. FDAA...  124     3e-41
A0A009ZHD3 META domain protein [Acinetobacter sp. 479375]             124     3e-41
A0A7T9UJ24 META domain-containing protein [Acinetobacter ursingii]    122     1e-40
A0A3A8EWG7 META domain-containing protein [Acinetobacter guerrae]     119     1e-39
N8YEH8 DUF306 domain-containing protein [Acinetobacter gerneri DS...  108     4e-35
N8PZM6 DUF306 domain-containing protein [Acinetobacter sp. CIP-A165]  99.0    2e-31


>Q6FES1 DUF306 domain-containing protein [Acinetobacter baylyi 
(strain ATCC 33305 / BD413 / ADP1)]
Length=115

 Score = 229 bits (584),  Expect = 1e-83
 Identities = 114/115 (99%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  1    LFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV  60
            +FKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV
Sbjct  1    MFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV  60

Query  61   ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQSVN  115
            ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQSVN
Sbjct  61   ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQSVN  115


>A0A7G2SGF6 DUF306 domain-containing protein [Acinetobacter sp]
Length=165

 Score = 230 bits (586),  Expect = 4e-83
 Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  1    LFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV  60
            LFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV
Sbjct  51   LFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV  110

Query  61   ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQSVN  115
            ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQSVN
Sbjct  111  ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQSVN  165


>A0A0M1I4G8 DUF306 domain-containing protein [Acinetobacter sp. 
C15]
Length=162

 Score = 132 bits (331),  Expect = 2e-44
 Identities = 55/112 (49%), Positives = 84/112 (75%), Gaps = 0/112 (0%)

Query  1    LFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV  60
            L  ++W A+EINGFQ+  +  NKPSL+ D  T+RFSG+DGCNR+MGS++  ++ L  GA 
Sbjct  51   LLDRNWTATEINGFQISTQVANKPSLKFDSKTQRFSGTDGCNRMMGSFKADAESLQLGAA  110

Query  61   ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQ  112
            A+TKM+C + DQN+++QY+Q+L   ++YR SPEHLIL+D +G  ++  D ++
Sbjct  111  ASTKMMCPNTDQNISVQYQQALTNVSRYRASPEHLILMDQSGRIVMALDASK  162


>N9BYR6 DUF306 domain-containing protein [Acinetobacter soli NIPH 
2899]
Length=162

 Score = 132 bits (331),  Expect = 2e-44
 Identities = 55/112 (49%), Positives = 84/112 (75%), Gaps = 0/112 (0%)

Query  1    LFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV  60
            L  ++W A+EINGFQ+  +  NKPSL+ D  T+RFSG+DGCNR+MGS++  ++ L  GA 
Sbjct  51   LLDRNWTATEINGFQISTQVANKPSLKFDSKTQRFSGTDGCNRMMGSFKADAESLQLGAA  110

Query  61   ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQ  112
            A+TKM+C + DQN+++QY+Q+L   ++YR SPEHLIL+D +G  ++  D ++
Sbjct  111  ASTKMMCPNTDQNISVQYQQALTNVSRYRASPEHLILMDQSGRIVMALDASK  162


>A0A1P8EM90 META domain-containing protein [Acinetobacter soli]
Length=162

 Score = 132 bits (331),  Expect = 2e-44
 Identities = 55/112 (49%), Positives = 84/112 (75%), Gaps = 0/112 (0%)

Query  1    LFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV  60
            L  ++W A+EINGFQ+  +  NKPSL+ D  T+RFSG+DGCNR+MGS++  ++ L  GA 
Sbjct  51   LLDRNWTATEINGFQISTQVANKPSLKFDSKTQRFSGTDGCNRMMGSFKADAESLQLGAA  110

Query  61   ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQ  112
            A+TKM+C + DQN+++QY+Q+L   ++YR SPEHLIL+D +G  ++  D ++
Sbjct  111  ASTKMMCPNTDQNISVQYQQALTNVSRYRASPEHLILMDQSGRIVMALDASK  162


>N9C5W3 DUF306 domain-containing protein [Acinetobacter ursingii 
ANC 3649]
Length=159

 Score = 124 bits (310),  Expect = 3e-41
 Identities = 56/113 (50%), Positives = 79/113 (70%), Gaps = 1/113 (1%)

Query  1    LFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV  60
            L++QHW+A+EINGFQV+  +   P +Q D ++KRFSGSDGCN+IMGS+  + D L+FG +
Sbjct  48   LYQQHWVATEINGFQVE-SSEKTPQIQFDSSSKRFSGSDGCNQIMGSFNTTDDHLSFGQI  106

Query  61   ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQS  113
            A+TKM+C  A+     QY+Q+L K T YR S + L+L D  G TL+ F  A +
Sbjct  107  ASTKMMCPDANSLTATQYQQALAKVTSYRASSQLLVLFDQNGQTLIAFKKADT  159


>A0A3R9CTW3 META domain-containing protein [Acinetobacter sp. 
FDAARGOS_515]
Length=159

 Score = 124 bits (310),  Expect = 3e-41
 Identities = 56/113 (50%), Positives = 79/113 (70%), Gaps = 1/113 (1%)

Query  1    LFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV  60
            L++QHW+A+EINGFQV+  +   P +Q D ++KRFSGSDGCN+IMGS+  + D L+FG +
Sbjct  48   LYQQHWVATEINGFQVE-SSEKTPQIQFDSSSKRFSGSDGCNQIMGSFNTTDDHLSFGQI  106

Query  61   ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQS  113
            A+TKM+C  A+     QY+Q+L K T YR S + L+L D  G TL+ F  A +
Sbjct  107  ASTKMMCPDANSLTATQYQQALAKVTSYRASSQLLVLFDQNGQTLIAFKKADT  159


>A0A009ZHD3 META domain protein [Acinetobacter sp. 479375]
Length=159

 Score = 124 bits (310),  Expect = 3e-41
 Identities = 56/113 (50%), Positives = 79/113 (70%), Gaps = 1/113 (1%)

Query  1    LFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV  60
            L++QHW+A+EINGFQV+  +   P +Q D ++KRFSGSDGCN+IMGS+  + D L+FG +
Sbjct  48   LYQQHWVATEINGFQVE-SSEKTPQIQFDSSSKRFSGSDGCNQIMGSFNTADDHLSFGEI  106

Query  61   ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQS  113
            A+TKM+C  A+     QY+Q+L K T YR S + L+L D  G TL+ F  A +
Sbjct  107  ASTKMMCPDANSLTATQYQQALAKVTSYRASSQLLVLFDQNGQTLIAFKKADT  159


>A0A7T9UJ24 META domain-containing protein [Acinetobacter ursingii]
Length=159

 Score = 122 bits (306),  Expect = 1e-40
 Identities = 56/113 (50%), Positives = 78/113 (69%), Gaps = 1/113 (1%)

Query  1    LFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV  60
            L++QHW A+EINGFQV+  +   P +Q D ++KRFSGSDGCN+IMGS+  + D L+FG +
Sbjct  48   LYQQHWAATEINGFQVE-SSEKTPQIQFDSSSKRFSGSDGCNQIMGSFNTADDHLSFGEI  106

Query  61   ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVAQS  113
            A+TKM+C  A+     QY+Q+L K T YR S + L+L D  G TL+ F  A +
Sbjct  107  ASTKMMCPDANSLTATQYQQALAKVTSYRASSQLLVLFDQNGQTLIAFKKADT  159


>A0A3A8EWG7 META domain-containing protein [Acinetobacter guerrae]
Length=160

 Score = 119 bits (299),  Expect = 1e-39
 Identities = 55/111 (50%), Positives = 75/111 (68%), Gaps = 1/111 (1%)

Query  1    LFKQHWIASEINGFQVDPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGAV  60
            L+ Q W+A+EINGFQV P +   P +Q D  +KRFSGSDGCN+IMGS+  + D+LN G +
Sbjct  49   LYAQRWVATEINGFQVQP-SEKMPQIQFDSRSKRFSGSDGCNQIMGSFSTTDDRLNLGQI  107

Query  61   ATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFDVA  111
            A+TKM+C  A+     QY+Q+LEK  +YR S + L+L D  G TL+    A
Sbjct  108  ASTKMMCTDANSLTATQYQQALEKVARYRASSQLLVLFDQNGQTLIALKKA  158


>N8YEH8 DUF306 domain-containing protein [Acinetobacter gerneri 
DSM 14967 = CIP 107464 = MTCC 9824]
Length=153

 Score = 108 bits (269),  Expect = 4e-35
 Identities = 55/110 (50%), Positives = 75/110 (68%), Gaps = 2/110 (2%)

Query  1    LFKQHWIASEINGFQVDPKAT-NKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFGA  59
            L K+ W+ + +   +   KAT NKPSL  DQ+T RFSGSDGCNRIMG+Y+ +   L F A
Sbjct  39   LQKRTWVLTHLGSTRTQLKATDNKPSLSFDQSTNRFSGSDGCNRIMGTYKATEQSLLFSA  98

Query  60   VATTKMLCASADQNLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVFD  109
            VA T+M+C   +Q L+  YKQ+L K ++Y+ S  HL LLD+ G+TLL F+
Sbjct  99   VAGTQMMC-QENQQLSANYKQALSKVSRYKASGHHLTLLDAQGTTLLRFE  147


 Score = 17.7 bits (34),  Expect = 0.55
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 0/14 (0%)

Query  81  SLEKTTQYRVSPEH  94
           S E +T Y +S EH
Sbjct  21  SNEPSTHYPISREH  34


>N8PZM6 DUF306 domain-containing protein [Acinetobacter sp. CIP-A165]
Length=158

 Score = 99.0 bits (245),  Expect = 2e-31
 Identities = 48/111 (43%), Positives = 70/111 (63%), Gaps = 3/111 (3%)

Query  1    LFKQHWIASEINGFQV--DPKATNKPSLQLDQATKRFSGSDGCNRIMGSYQLSSDQLNFG  58
            L+   W+A++ING  +  D  +  KP++Q D  TKRFSG+DGCN+I GS++ S+ QL  G
Sbjct  40   LYNHTWVATQINGVDIKTDGPSHQKPAIQFDANTKRFSGADGCNKIFGSFESSAKQLQLG  99

Query  59   AVATTKMLCASADQ-NLTLQYKQSLEKTTQYRVSPEHLILLDSTGSTLLVF  108
             +A+T+M C   D   L+ QY  +L  TT Y++    L LLDS+G  L+ F
Sbjct  100  PIASTRMACIGNDNATLSRQYSDALTNTTSYKIKGHELQLLDSSGKALVSF  150



Lambda      K        H        a         alpha
   0.320    0.131    0.378    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 130118


  Database: a78e69af8429bf0c1997b78358ed7f2a.TrEMBL.fasta
    Posted date:  May 9, 2024  7:47 PM
  Number of letters in database: 1,873
  Number of sequences in database:  12



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40