Comparative Genomics

ACIAD0516 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 81fbfae70f8d21fe7c8405328529bdfc.TrEMBL.fasta
           11 sequences; 1,313 total letters



Query= ACIAD0516

Length=99
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FER6 Uncharacterized protein [Acinetobacter baylyi (strain ATCC...  197     1e-71
A0A7G2SGG4 Uncharacterized protein [Acinetobacter sp]                 198     1e-71
A0A3R9AX01 Uncharacterized protein [Acinetobacter soli]               153     7e-54
A0A0M1I4P1 Uncharacterized protein [Acinetobacter sp. C15]            153     9e-54
N9BS96 Uncharacterized protein [Acinetobacter soli NIPH 2899]         152     1e-53
A0A1P8EMM2 Uncharacterized protein [Acinetobacter soli]               149     4e-52
A0A009ZTT8 Putative membrane protein [Acinetobacter sp. 479375]       90.5    6e-29
A0A3R9C5D7 DUF308 domain-containing protein [Acinetobacter sp. FD...  88.2    4e-28
N9C6V2 EamA domain-containing protein [Acinetobacter ursingii ANC...  88.2    4e-28
A0A3A8EUL4 EamA domain-containing protein [Acinetobacter guerrae]     87.8    6e-28
A0A3D2SP84 Uncharacterized protein [Acinetobacter ursingii]           87.4    9e-28


>Q6FER6 Uncharacterized protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=98

 Score = 197 bits (501),  Expect = 1e-71
 Identities = 97/98 (99%), Positives = 98/98 (100%), Gaps = 0/98 (0%)

Query  1   LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  60
           +IYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV
Sbjct  1   MIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  60

Query  61  TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPRK  98
           TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPRK
Sbjct  61  TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPRK  98


>A0A7G2SGG4 Uncharacterized protein [Acinetobacter sp]
Length=122

 Score = 198 bits (503),  Expect = 1e-71
 Identities = 98/98 (100%), Positives = 98/98 (100%), Gaps = 0/98 (0%)

Query  1    LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  60
            LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV
Sbjct  25   LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  84

Query  61   TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPRK  98
            TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPRK
Sbjct  85   TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPRK  122


>A0A3R9AX01 Uncharacterized protein [Acinetobacter soli]
Length=122

 Score = 153 bits (387),  Expect = 7e-54
 Identities = 72/98 (73%), Positives = 85/98 (87%), Gaps = 0/98 (0%)

Query  1    LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  60
            +IYWLS IQ L+P YV+ SV+IGIV H+IRHK QQIH  NPYREGF ILA V PI+ALI+
Sbjct  25   VIYWLSHIQPLSPKYVVVSVLIGIVTHIIRHKRQQIHHDNPYREGFNILANVFPIIALII  84

Query  61   TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPRK  98
            TI +LP+++KWI GLQVLGF+VLG+CLASTAHYREPRK
Sbjct  85   TISLLPDSSKWIPGLQVLGFSVLGLCLASTAHYREPRK  122


>A0A0M1I4P1 Uncharacterized protein [Acinetobacter sp. C15]
Length=122

 Score = 153 bits (386),  Expect = 9e-54
 Identities = 72/98 (73%), Positives = 85/98 (87%), Gaps = 0/98 (0%)

Query  1    LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  60
            +IYWLS IQ L+P YV+ SV+IGIV H+IRHK QQIH  NPYREGF ILA V PI+ALI+
Sbjct  25   VIYWLSHIQPLSPKYVVISVLIGIVTHIIRHKRQQIHHDNPYREGFNILANVFPIIALII  84

Query  61   TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPRK  98
            TI +LP+++KWI GLQVLGF+VLG+CLASTAHYREPRK
Sbjct  85   TISLLPDSSKWIPGLQVLGFSVLGLCLASTAHYREPRK  122


>N9BS96 Uncharacterized protein [Acinetobacter soli NIPH 2899]
Length=122

 Score = 152 bits (385),  Expect = 1e-53
 Identities = 71/98 (72%), Positives = 85/98 (87%), Gaps = 0/98 (0%)

Query  1    LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  60
            +IYWLS IQ L+P YV+ SV+IGI+ H+IRHK QQIH  NPYREGF ILA V PI+ALI+
Sbjct  25   VIYWLSHIQPLSPKYVMVSVLIGIMTHIIRHKRQQIHHDNPYREGFNILANVFPIIALII  84

Query  61   TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPRK  98
            TI +LP+++KWI GLQVLGF+VLG+CLASTAHYREPRK
Sbjct  85   TISLLPDSSKWIPGLQVLGFSVLGLCLASTAHYREPRK  122


>A0A1P8EMM2 Uncharacterized protein [Acinetobacter soli]
Length=122

 Score = 149 bits (375),  Expect = 4e-52
 Identities = 69/98 (70%), Positives = 83/98 (85%), Gaps = 0/98 (0%)

Query  1    LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  60
            +IYWLS IQ L+P YV+ SV+IGI+ H+IRHK QQIH  NPY EGF ILA V PI+ALI+
Sbjct  25   VIYWLSHIQPLSPKYVMVSVLIGIMTHIIRHKRQQIHHDNPYSEGFNILANVFPIVALII  84

Query  61   TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPRK  98
            TI +LP+++KWI GLQV GF+VLG+CLASTAHYREPRK
Sbjct  85   TISLLPDSSKWIPGLQVFGFSVLGLCLASTAHYREPRK  122


>A0A009ZTT8 Putative membrane protein [Acinetobacter sp. 479375]
Length=121

 Score = 90.5 bits (223),  Expect = 6e-29
 Identities = 41/97 (42%), Positives = 66/97 (68%), Gaps = 0/97 (0%)

Query  1    LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  60
            +IY  S+I++L   +V+ S+++G++ H ++ K+ +I   NPY EGF I+  VLPI+ALI 
Sbjct  25   IIYLSSTIEKLPALFVVMSLLLGMIHHFLQQKISRIQADNPYAEGFSIIGFVLPIIALIT  84

Query  61   TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPR  97
             I  LP++ +WIL +QV+GF+ LG+ + S    R PR
Sbjct  85   LIAFLPQSHQWILAIQVIGFSALGLFIVSIYQNRAPR  121


 Score = 15.8 bits (29),  Expect = 1.3
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)

Query  83  LGVCLAS  89
           LG+C+A+
Sbjct  16  LGICIAT  22


>A0A3R9C5D7 DUF308 domain-containing protein [Acinetobacter sp. 
FDAARGOS_515]
Length=121

 Score = 88.2 bits (217),  Expect = 4e-28
 Identities = 40/97 (41%), Positives = 63/97 (65%), Gaps = 0/97 (0%)

Query  1    LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  60
            +IY  S+I++L   +V+ S+++G++ H ++ K+ +I   NPY EGF I+  V PIMALI 
Sbjct  25   IIYLSSTIEKLPALFVVMSLLLGMIHHFLQQKISRIQADNPYTEGFSIIGFVFPIMALIT  84

Query  61   TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPR  97
                LP+  +WIL +QV+GF+ LG+ + S    R PR
Sbjct  85   LFSFLPQPHQWILAIQVIGFSALGLFIVSIYQNRAPR  121


 Score = 15.8 bits (29),  Expect = 1.3
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)

Query  83  LGVCLAS  89
           LG+C+A+
Sbjct  16  LGICIAT  22


>N9C6V2 EamA domain-containing protein [Acinetobacter ursingii 
ANC 3649]
Length=121

 Score = 88.2 bits (217),  Expect = 4e-28
 Identities = 40/97 (41%), Positives = 63/97 (65%), Gaps = 0/97 (0%)

Query  1    LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  60
            +IY  S+I++L   +V+ S+++G++ H ++ K+ +I   NPY EGF I+  V PIMALI 
Sbjct  25   IIYLSSTIEKLPALFVVMSLLLGMIHHFLQQKISRIQADNPYTEGFSIIGFVFPIMALIT  84

Query  61   TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPR  97
                LP+  +WIL +QV+GF+ LG+ + S    R PR
Sbjct  85   LFSFLPQPHQWILAIQVIGFSALGLFIVSIYQNRAPR  121


 Score = 15.8 bits (29),  Expect = 1.3
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)

Query  83  LGVCLAS  89
           LG+C+A+
Sbjct  16  LGICIAT  22


>A0A3A8EUL4 EamA domain-containing protein [Acinetobacter guerrae]
Length=121

 Score = 87.8 bits (216),  Expect = 6e-28
 Identities = 40/97 (41%), Positives = 63/97 (65%), Gaps = 0/97 (0%)

Query  1    LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  60
            +IY  SSI++L   +V+ S+++G++ H ++ K+++I   NPY EGF I+  V PI+ALI 
Sbjct  25   IIYISSSIEKLPTLFVIMSLLLGMINHFLQQKIKRIQADNPYAEGFSIIGFVFPIIALIT  84

Query  61   TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPR  97
                LP+  KW L +QV+GF+ LG+ + S    R PR
Sbjct  85   LFSFLPQLHKWALAIQVIGFSALGLFMVSIYQNRAPR  121


>A0A3D2SP84 Uncharacterized protein [Acinetobacter ursingii]
Length=121

 Score = 87.4 bits (215),  Expect = 9e-28
 Identities = 40/97 (41%), Positives = 65/97 (67%), Gaps = 0/97 (0%)

Query  1    LIYWLSSIQQLTPYYVLASVMIGIVIHLIRHKLQQIHQGNPYREGFKILATVLPIMALIV  60
            +IY  S+I++L   +V+ S+++G++ H ++ K++ +   NPY EGF I+  VLPI+ALI 
Sbjct  25   IIYLSSNIEKLPTLFVVMSLLLGMIHHFLQQKIRCLPSDNPYAEGFSIIGFVLPIIALIT  84

Query  61   TIFMLPETAKWILGLQVLGFTVLGVCLASTAHYREPR  97
             I  LP+  +WIL +QV+GF+ LG+ + S    R PR
Sbjct  85   LIAFLPQPHQWILAIQVIGFSALGLFIVSIYQNRAPR  121


 Score = 15.8 bits (29),  Expect = 1.3
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)

Query  83  LGVCLAS  89
           LG+C+A+
Sbjct  16  LGICIAT  22



Lambda      K        H        a         alpha
   0.336    0.147    0.465    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 74971


  Database: 81fbfae70f8d21fe7c8405328529bdfc.TrEMBL.fasta
    Posted date:  May 30, 2024  8:51 PM
  Number of letters in database: 1,313
  Number of sequences in database:  11



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40