BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e57a790f32cecaebc1799272f4b974f4.SwissProt.fasta
18 sequences; 9,286 total letters
Query= ACIAD0564
Length=385
Score E
Sequences producing significant alignments: (Bits) Value
Q9HXJ7 Outer membrane protein assembly factor BamB [Pseudomonas a... 188 2e-59
Q5X521 Outer membrane protein assembly factor BamB [Legionella pn... 165 2e-50
Q0A984 Outer membrane protein assembly factor BamB [Alkalilimnico... 160 1e-48
Q63UT0 Outer membrane protein assembly factor BamB [Burkholderia ... 158 9e-48
Q8P980 Outer membrane protein assembly factor BamB [Xanthomonas c... 155 2e-46
G4Q9J6 Outer membrane protein assembly factor BamB [Taylorella as... 152 1e-45
C6BGE7 Outer membrane protein assembly factor BamB [Ralstonia pic... 151 4e-45
E4PKG3 Outer membrane protein assembly factor BamB [Marinobacter ... 148 4e-44
Q0AE45 Outer membrane protein assembly factor BamB [Nitrosomonas ... 148 6e-44
F8GAQ8 Outer membrane protein assembly factor BamB [Francisella s... 149 3e-43
P77774 Outer membrane protein assembly factor BamB [Escherichia c... 139 2e-40
Q9RTJ3 Desiccation/radiation resistance protein DR_1769 [Deinococ... 56.6 9e-12
Q9RRH3 DNA damage-responsive serine/threonine-protein kinase RqkA... 54.3 5e-11
Q09499 Serine/threonine-protein kinase / Endoribonuclease [Caenor... 49.3 2e-09
Q4W6G0 Quinohemoprotein alcohol dehydrogenase ADH-IIG [Pseudomona... 42.4 3e-07
Q9AF95 1-butanol dehydrogenase (cytochrome c) [Thauera butanivora... 41.6 5e-07
Q9Z4J7 Quinoprotein ethanol dehydrogenase [Pseudomonas aeruginosa... 38.9 3e-06
A8R3S4 Quinoprotein ethanol dehydrogenase [Pseudomonas putida] 38.9 3e-06
>Q9HXJ7 Outer membrane protein assembly factor BamB [Pseudomonas
aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 /
JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=380
Score = 188 bits (478), Expect = 2e-59
Identities = 120/380 (32%), Positives = 202/380 (53%), Gaps = 12/380 (3%)
Query 10 ALIIASAALVGCTSNQVKKEEAKPNPLPKLAQTQTQALVPIFSQSVSSMPKADPLRLQLD 69
AL+ + A+VGC+SN K+E P L + L +S+SV + D L
Sbjct 8 ALLALALAVVGCSSNS--KKELPPAELTDFKEEVV--LSKQWSRSVGD-GQGDLYNLLEP 62
Query 70 TLNG-VIFVPDPKGKVSAYRGK--ERLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIAL 126
++G I+ +G+V A + + + LW + + ++ G G G+V+VG ++G++IAL
Sbjct 63 AVDGSTIYAASAEGRVMAIQRETGDVLWKKDLERP-VSGGVGVGYGLVLVGTLRGDVIAL 121
Query 127 DQQTGQQKWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYKMPTIQFSL 186
D+ TG++KW ++ VLS V D + DA +G Q W Y+ +L
Sbjct 122 DEATGKKKWTKRVNSEVLSAPATNGDVVVVQTQDDKLIGLDAASGDQRWIYESTVPVLTL 181
Query 187 RGQPSPVMLDDRTVVVASANGYVYGIDVISGVPRFQRRVAVSEGRSDIQRLIDIDGDPVV 246
RG +P++ + + A+G V +DV G+P +++RVA+ +GRS++ R++DIDG ++
Sbjct 182 RGTGAPLIAGNMALA-GLASGKVVAVDVQRGLPIWEQRVAIPQGRSELDRVVDIDGGLLL 240
Query 247 SGQYLVTVSYQGQVTVTDLTNLSVVWNQDASSNKRPAVYDNKVFVAQADGKLTAYDLGTG 306
SG L VSYQG+ D+ + ++W ++ASS A ++V+QA G + D
Sbjct 241 SGDTLYVVSYQGRAAALDVNSGRLLWQREASSYVGVAEGFGNIYVSQASGSVEGLDSRGA 300
Query 307 SKLWESDVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAKTRGEVSSLR--V 364
S LW +D L RQLS P + ++VVGDL+G +HL++ G+ +GR + + +R V
Sbjct 301 SSLWNNDALARRQLSAPAVFSSNVVVGDLEGYVHLLSQVDGRFVGRERVDSDGVRVRPLV 360
Query 365 VDGHLYTSTRKGALTIWEVR 384
V +Y G L + +R
Sbjct 361 VGSWMYVFGNGGKLVAYTIR 380
>Q5X521 Outer membrane protein assembly factor BamB [Legionella
pneumophila (strain Paris)]
Length=384
Score = 165 bits (418), Expect = 2e-50
Identities = 110/386 (28%), Positives = 189/386 (49%), Gaps = 22/386 (6%)
Query 6 KFPFALIIASAALVGCT----------SNQVKKEEAKPNPLPKLAQTQTQALVPIFSQSV 55
K ++I A GCT + KE + P K+AQ+ T P+
Sbjct 2 KIRILVLILCALTQGCTYVDDYMLGKDNTPQPKELKEIQPKVKMAQSWT---TPVGKAHK 58
Query 56 SSMPKADPLRLQLDTLNGVIFVPDPKGKVSAYRGKERL--WTTRVTKHRLTAGTVAGEGI 113
++ + L ++ VI+ D G V A K+ W+T + K+ + +G G
Sbjct 59 TN----EYLNIKPAIRGDVIYTADASGLVQAVNRKDGQIKWSTAL-KNNIVSGPTVAAGY 113
Query 114 VVVGNIKGELIALDQQTGQQKWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQ 173
V VG L+ L+Q G++ W+ +++ VL+P I +V DG V+A DA G+Q
Sbjct 114 VAVGTNASTLVLLNQSDGKEIWQNKVSAEVLAPPAISHQKVIAKTIDGKVYAIDAVNGKQ 173
Query 174 VWTYKMPTIQFSLRGQPSPVMLDDRTVVVASANGYVYGIDVISGVPRFQRRVAVSEGRSD 233
+W L+ SP+++DD V+V ++G + +++ +G +QR +A G SD
Sbjct 174 LWVADHGAPSLVLKASSSPIIVDD-LVLVGFSDGKLDALELQTGRLIWQRSIAYGTGASD 232
Query 234 IQRLIDIDGDPVVSGQYLVTVSYQGQVTVTDLTNLSVVWNQDASSNKRPAVYDNKVFVAQ 293
++RL+DID DP++S +YQG V L+N +W + AS K + N ++
Sbjct 233 VERLVDIDSDPIISNNVAYLATYQGYVGALSLSNGQFIWRKPASVYKNMLLSHNNLYFTD 292
Query 294 ADGKLTAYDLGTGSKLWESDVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRA 353
++ L + + TG W+ L R L+ P ++G +L VGD G +H+++ +G+L+GR+
Sbjct 293 SNDVLWSLNSSTGQVNWKQTSLKARGLTAPALVGGNLAVGDKTGYLHILSTQTGELLGRS 352
Query 354 KTRGEVSSLRVVDG-HLYTSTRKGAL 378
+ G V+ V G ++Y T G L
Sbjct 353 QLSGGVTVSPSVSGKNMYVLTNNGML 378
Score = 37.4 bits (85), Expect = 9e-06
Identities = 27/113 (24%), Positives = 46/113 (41%), Gaps = 11/113 (10%)
Query 279 NKRPAVYDNKVFVAQADGKLTAYDLGTGSKLWESDVLLNRQLSNPVMLGKDLVVGDLDGV 338
N +PA+ + ++ A A G + A + G W S L N +S P + + VG
Sbjct 64 NIKPAIRGDVIYTADASGLVQAVNRKDGQIKW-STALKNNIVSGPTVAAGYVAVGTNAST 122
Query 339 IHLINPDSGQLIGRAKTRGEVSS----------LRVVDGHLYTSTRKGALTIW 381
+ L+N G+ I + K EV + + +DG +Y +W
Sbjct 123 LVLLNQSDGKEIWQNKVSAEVLAPPAISHQKVIAKTIDGKVYAIDAVNGKQLW 175
>Q0A984 Outer membrane protein assembly factor BamB [Alkalilimnicola
ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)]
Length=383
Score = 160 bits (405), Expect = 1e-48
Identities = 97/310 (31%), Positives = 166/310 (54%), Gaps = 6/310 (2%)
Query 73 GVIFVPDPKGKVSAYRGK--ERLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIALDQQT 130
G ++ D G+V+A+ + ERLW T L AG AG G+V+VG G L+ALD +
Sbjct 68 GRVYAADSNGRVTAWDAESGERLWRVD-TGRELAAGPGAGGGLVLVGARDGRLLALDAEN 126
Query 131 GQQKWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYKMPTIQFSLRGQP 190
G+++W + L+ +L+ I + V + DG V+ D TG+++W + +LRG
Sbjct 127 GEERWVSGLSSEILAVPQIARNIVVARSGDGRVYGLDGLTGRRLWIHDRSVPVLTLRGSS 186
Query 191 SPVMLDDRTVVVASANGYVYGIDVISGVPRFQRRVAVSEGRSDIQRLIDIDGDPVVSGQY 250
SPV++ +R VVV NG + +++ G ++ V++ GRSD++R++D+ DP+V
Sbjct 187 SPVVVGNR-VVVGQDNGRLVTLNLQDGEVIWEAPVSIPRGRSDLERMVDLHADPLVFRGV 245
Query 251 LVTVSYQGQVTVTDLTNLSVVWNQDASSNKRPAVYDNKVFVAQADGKLTAYDLGTGSKLW 310
+YQG++ + + W++D + A +++V +L A D G+ +W
Sbjct 246 AYAQAYQGELAAVGMGDGRERWSRDIPGHTGMAADSRQLYVVDDQSRLWALDRNNGATVW 305
Query 311 ESDVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAK-TRGEVSSLRVVDGH- 368
D L +L+ PV++G LV+ D +G ++ I PD+G L+GR + R + V DG
Sbjct 306 RQDRLQGLRLTAPVVIGGHLVLADEEGYLNWIAPDNGDLVGRDRHGRQPIQRPPVPDGDV 365
Query 369 LYTSTRKGAL 378
LY + G L
Sbjct 366 LYLLSADGRL 375
Score = 40.0 bits (92), Expect = 1e-06
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query 282 PAVYDNKVFVAQADGKLTAYDLGTGSKLWESDVLLNRQL-SNPVMLGKDLVVGDLDGVIH 340
PAV +V+ A ++G++TA+D +G +LW D R+L + P G ++VG DG +
Sbjct 63 PAVEGGRVYAADSNGRVTAWDAESGERLWRVDT--GRELAAGPGAGGGLVLVGARDGRLL 120
Query 341 LINPDSGQ 348
++ ++G+
Sbjct 121 ALDAENGE 128
Score = 37.4 bits (85), Expect = 9e-06
Identities = 41/174 (24%), Positives = 59/174 (34%), Gaps = 49/174 (28%)
Query 244 PVVSGQYLVTVSYQGQVTVTDLTNLSVVWNQDASSNKR---------------------- 281
P V G + G+VT D + +W D
Sbjct 63 PAVEGGRVYAADSNGRVTAWDAESGERLWRVDTGRELAAGPGAGGGLVLVGARDGRLLAL 122
Query 282 --------------------PAVYDNKVFVAQADGKLTAYDLGTGSKLWESD----VLLN 317
P + N V DG++ D TG +LW D VL
Sbjct 123 DAENGEERWVSGLSSEILAVPQIARNIVVARSGDGRVYGLDGLTGRRLWIHDRSVPVLTL 182
Query 318 RQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAKT---RGEVSSLRVVDGH 368
R S+PV++G +VVG +G + +N G++I A RG R+VD H
Sbjct 183 RGSSSPVVVGNRVVVGQDNGRLVTLNLQDGEVIWEAPVSIPRGRSDLERMVDLH 236
>Q63UT0 Outer membrane protein assembly factor BamB [Burkholderia
pseudomallei (strain K96243)]
Length=381
Score = 158 bits (399), Expect = 9e-48
Identities = 103/382 (27%), Positives = 182/382 (48%), Gaps = 11/382 (3%)
Query 1 MDIKYKFPFALIIASAALVGCTSNQVKKEEAKPNPLPKLAQTQTQALVPIFSQSVSSMPK 60
M++ ++ + A+A LV + K P PL T+ + ++ + +S+ K
Sbjct 1 MNLLKRYAAPVACAAAVLVFAACSSTKDARRVPTPL-----TEFKPVLDVQQVWTASVGK 55
Query 61 ADPLRLQLDTLNGVIFVPDPKGKVSAYRGK--ERLWTTRVTKHRLTAGTVAGEGIVVVGN 118
+ ++V G V K +++W T++ L+AG + + VG
Sbjct 56 GGRYSFSPVAVGDAVYVAGANGSVEKIDAKTGQQVWRTKIGSD-LSAGVGSDGNLTAVGA 114
Query 119 IKGELIALDQQTGQQKWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYK 178
+KG + L G+Q WKA + G + SP L+ G V DG V A A+TG+Q WTY+
Sbjct 115 LKGGVFVLGPD-GKQLWKATVQGEIFSPPLVGNGLVIVRTIDGQVIAFAAQTGEQKWTYR 173
Query 179 MPTIQFSLRGQPSPVMLDDRTVVVASANGYVYGIDVISGVPRFQRRVAVSEGRSDIQRLI 238
+ +LR D V+ G + +++ +G P +Q V+ +G ++++R+
Sbjct 174 NRAVPLNLRVSAGMTFAGDAAVLAGFPGGGLVALNLQTGEPFWQTPVSFPKGVTEVERIN 233
Query 239 DIDGDPVVSGQYLVTVSYQGQVTVTDLTNLSVVWNQDASSNKRPAVYDNKVFVAQADGKL 298
D+ G P + G V++QGQ+ D + +W + SS A D V +
Sbjct 234 DVTGAPTLVGAETCAVTFQGQLGCFDANSGRPLWEKPFSSRSGVAQDDTVVVGGDDWSVV 293
Query 299 TAYDLGTGSKLWESDVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAKTRGE 358
+AYD+ TG LW +D L +R + P +LG+ +V+GD G +H ++ D G + R KT G
Sbjct 294 SAYDVATGKALWRNDKLKSRDVGVPYLLGRAVVLGDYKGFVHFLSRDDGTFVARMKTDGS 353
Query 359 -VSSLRVVDGH-LYTSTRKGAL 378
+++ V+ G+ L T+ G +
Sbjct 354 AIAAAPVLAGNTLVVLTQDGGV 375
>Q8P980 Outer membrane protein assembly factor BamB [Xanthomonas
campestris pv. campestris (strain ATCC 33913 / DSM 3586 /
NCPPB 528 / LMG 568 / P 25)]
Length=406
Score = 155 bits (391), Expect = 2e-46
Identities = 91/303 (30%), Positives = 153/303 (50%), Gaps = 3/303 (1%)
Query 83 KVSAYRGKERLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIALDQQTGQQKWKAQLTGA 142
+V Y+ K+ R K RL+ G GEG+VV+G + G++IAL+Q G +KW+A++
Sbjct 103 RVWEYKPKKEERNDRKFKQRLSGGPGVGEGLVVIGTLSGDVIALNQADGTEKWRAKVPNE 162
Query 143 VLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYKMPTIQFSLRGQPSPVMLDDRTVVV 202
V++ I Q V +NDG V A DA TG++ W + S+RG +P++ V V
Sbjct 163 VIAAPAIAQSLVLVRSNDGRVSAFDAATGERRWFHAEEGPTLSVRGN-APIVTGPGVVFV 221
Query 203 ASANGYVYGIDVISGVPRFQRRVAVSEGRSDIQRLIDIDGDPVVSGQYLVTVSYQGQVTV 262
+ G + + + G P +++ + V EGR++++R+ D+DG PV+ G L S++ +
Sbjct 222 GNDVGTLSALALQDGRPLWEQAIGVPEGRTELERMSDVDGAPVLDGTTLYATSFKNETLA 281
Query 263 TDLTNLSVVWNQDASSNKRPAVYDNKVFVAQADGKLTAYDLGTGSKLWESDVLLNRQLSN 322
+ + +W +D P V + V VA G + D +G+ +W L R L+
Sbjct 282 LEGPSGRPLWTRDHGGAGGPGVSSSVVVVADNAGSVWGLDKSSGAAMWSQAALARRSLTG 341
Query 323 PVMLGKDLVVGDLDGVIHLINPDSGQLIGRAKTRGE--VSSLRVVDGHLYTSTRKGALTI 380
+ G VVGD G +H + G L RA+ + ++ VVDG L G +T
Sbjct 342 VAIQGDYAVVGDYKGYLHWLKLSDGALAARARAGRDTLLAQPLVVDGILLVQNTDGDITA 401
Query 381 WEV 383
+ +
Sbjct 402 FRL 404
Score = 47.0 bits (110), Expect = 8e-09
Identities = 33/89 (37%), Positives = 45/89 (51%), Gaps = 9/89 (10%)
Query 280 KRPAVYDNKVFVAQADGKLTAYDLGTGSKLWE--------SDVLLNRQLSNPVMLGKDLV 331
+RPAV D KV+ A G + A DL TG ++WE +D ++LS +G+ LV
Sbjct 75 QRPAVADGKVYAAAITGGVQALDLQTGKRVWEYKPKKEERNDRKFKQRLSGGPGVGEGLV 134
Query 332 V-GDLDGVIHLINPDSGQLIGRAKTRGEV 359
V G L G + +N G RAK EV
Sbjct 135 VIGTLSGDVIALNQADGTEKWRAKVPNEV 163
Score = 43.5 bits (101), Expect = 1e-07
Identities = 53/230 (23%), Positives = 88/230 (38%), Gaps = 58/230 (25%)
Query 149 IYQGRVTTIANDGTVFAHDAETGQQVWTYKMPTIQFSLRGQPSPVMLDDRTVVVASANGY 208
+ G+V A G V A D +TG++VW YK P +DR
Sbjct 79 VADGKVYAAAITGGVQALDLQTGKRVWEYK-----------PKKEERNDR---------- 117
Query 209 VYGIDVISGVPRFQRRVAVSEGRSDIQRLIDIDGDPVVSGQYLVTVSYQGQVTVTDLTNL 268
+F++R + G P V +V + G V + +
Sbjct 118 -----------KFKQR---------------LSGGPGVGEGLVVIGTLSGDVIALNQADG 151
Query 269 SVVWNQDASSN--KRPAVYDNKVFVAQADGKLTAYDLGTGSKLW---ESDVLLNRQLSNP 323
+ W + PA+ + V V DG+++A+D TG + W E L+ + + P
Sbjct 152 TEKWRAKVPNEVIAAPAIAQSLVLVRSNDGRVSAFDAATGERRWFHAEEGPTLSVRGNAP 211
Query 324 VMLGKDLV-VGDLDGVIHLINPDSG-----QLIGRAKTRGEVSSLRVVDG 367
++ G +V VG+ G + + G Q IG + R E+ + VDG
Sbjct 212 IVTGPGVVFVGNDVGTLSALALQDGRPLWEQAIGVPEGRTELERMSDVDG 261
Score = 20.0 bits (40), Expect = 2.6
Identities = 8/27 (30%), Positives = 16/27 (59%), Gaps = 0/27 (0%)
Query 62 DPLRLQLDTLNGVIFVPDPKGKVSAYR 88
D L Q ++G++ V + G ++A+R
Sbjct 377 DTLLAQPLVVDGILLVQNTDGDITAFR 403
>G4Q9J6 Outer membrane protein assembly factor BamB [Taylorella
asinigenitalis (strain MCE3)]
Length=384
Score = 152 bits (384), Expect = 1e-45
Identities = 117/389 (30%), Positives = 191/389 (49%), Gaps = 18/389 (5%)
Query 1 MDIKYKFPFALIIASAALVGCTSNQVKKEEAKPNPLPKLAQTQTQALV-PIFSQSVSSMP 59
M + K F ++A +L+G S + K E + P KLA + +V ++ S+ S
Sbjct 1 MKLTLKRKFIAVLALTSLLGACS--LFKNERRFEPA-KLADIKQSIVVNTVWQTSIGSGG 57
Query 60 KADPLRLQLDTLNGVIFVPDPKG---KVSAYRGKERLWTTRVTKHRLTAGTVAGEGIVVV 116
A + D IF P G +V+A G W+T++ +LT+G G+G+V+V
Sbjct 58 SAGFAPVYADNS---IFAATPDGTVVRVNAENGNIA-WSTKLDT-KLTSGVGVGDGLVIV 112
Query 117 GNIKGELIALDQQTGQQKWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWT 176
+ K + AL+ QTG++ W +L+ P + G+V A+D V A D++ G+ W+
Sbjct 113 TDRKAKAYALNAQTGEKVWDTELSTISTMPPIAGFGKVIVRADDFRVQAFDSKDGKLHWS 172
Query 177 YKMPTIQFSLRGQPSPVMLDDRTVVVASANGYVYGIDVISGVPRFQRRVAVSEGRSDIQR 236
+ SL+ S + L + V+VA G + +++ G ++ A ++G SDI
Sbjct 173 FVRTNPILSLKTN-SRMALINNAVIVAVPTGKLVSLNLNDGTVNWEIHSASAKGPSDIDS 231
Query 237 LIDIDGDPVVSGQYLVTVSYQGQVTVTDLTN--LSVVWNQDASSNKRPAVYDNKVFVAQA 294
+ D+ G P+V + T SYQG +T + N L+ VW + SS +N ++ A
Sbjct 232 VTDVVGQPLVFNDGVCTSSYQGNITCYSIKNSRLTPVWFEPFSSAVGLGYDNNIIYGASI 291
Query 295 DGKLTAYDLGTGSKLWESDVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGR-- 352
DG + A+ L G W L+NR L+NPV+ L VGDLDG+IH+ + SG L+GR
Sbjct 292 DGTVAAFSLANGQIAWSDQTLINRGLTNPVVYQNYLYVGDLDGLIHVYDTKSGSLVGRFS 351
Query 353 -AKTRGEVSSLRVVDGHLYTSTRKGALTI 380
++ VS L D + G L +
Sbjct 352 VGSSKDIVSPLLPTDKGVVVQNGSGTLML 380
>C6BGE7 Outer membrane protein assembly factor BamB [Ralstonia
pickettii (strain 12D)]
Length=392
Score = 151 bits (381), Expect = 4e-45
Identities = 107/371 (29%), Positives = 175/371 (47%), Gaps = 13/371 (4%)
Query 12 IIASAALVGCTSNQVKKEEAKPNPLPKLAQTQTQALVPIFSQSVSSMPKADPLRLQLDTL 71
+ A+A L GC+ K K P + Q A+ ++S SV K+ +Q
Sbjct 25 LAATAVLGGCSLFSSKN---KHEPAKLMEVQQVLAVRQVWSVSVG---KSGRYVMQPAVA 78
Query 72 NGVIFVPDPKGKVSAYRGK--ERLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIALDQQ 129
++V G V+A G +W + LT G + + V KG +IA D++
Sbjct 79 GNNVYVSAAGGTVTALDGATGRTVWQGKADVD-LTTGPGSDGTLTAVAGEKGAVIAFDEK 137
Query 130 TGQQKWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYKMPTIQFSLRGQ 189
G QKWK + G VL+ L+ QG V DG V D G++ W Y+ +LR
Sbjct 138 -GAQKWKVAVNGEVLTAPLVGQGLVIVRTTDGRVLGLDPSNGERKWIYQRSPSALNLRSS 196
Query 190 PSPVMLDDRTVVVASANGYVYGIDVISGVPRFQRRVAVSEGRSDIQRLIDIDGDPVVSGQ 249
P++ +++ A G + + +G R++ V+ G S+I+RL D+ G P V+G
Sbjct 197 -LPMIFAGDNIILGFAGGKLGALSASNGALRWEAAVSYPRGVSEIERLNDVTGAPSVNGS 255
Query 250 YLVTVSYQGQVTVTDLTNLSVVWNQDASSNKRPAVYDNKVFVAQADGKLTAYDLGTGSKL 309
+ S+QG+V D++ + W +D SS D +F A + ++ G+ L
Sbjct 256 QVCAASFQGRVACFDMSTGAPRWGRDFSSPTGVTQDDGGLFAADEKSVVYGFNAQNGADL 315
Query 310 WESDVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAKTRGE-VSSLRVVDGH 368
W++D LL R L P+ G+ ++VGD +G +H ++ D G+ + R KT G + + VV G
Sbjct 316 WKNDALLWRDLGTPLAFGRAVIVGDSEGWLHFLSRDDGKFVARVKTDGSAIGAAPVVVGQ 375
Query 369 -LYTSTRKGAL 378
L TR G +
Sbjct 376 TLVVQTRGGGV 386
>E4PKG3 Outer membrane protein assembly factor BamB [Marinobacter
adhaerens (strain DSM 23420 / HP15)]
Length=390
Score = 148 bits (374), Expect = 4e-44
Identities = 101/375 (27%), Positives = 185/375 (49%), Gaps = 14/375 (4%)
Query 16 AALVGCTSNQVKKEEAKPNPLPKLAQTQTQALVPIFSQSVSSMPKADPLRLQLDTLNGVI 75
AAL GC+S ++ P P+P++ + ++S SV D L L +I
Sbjct 21 AALSGCSSTDTFEQ---PVPVPEIEASVE--FERVWSMSVGDGHDGDFLYLAPLVTGDLI 75
Query 76 FVPDPKGKVSAYRGK--ERLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIALDQQTGQQ 133
+ G++ A + E W + + R+ +G + + +L+AL ++ G +
Sbjct 76 YAASADGELYAVATETGEVAWESEF-EDRIFSGLGGDGQNLYLTTENADLVALSREDGSE 134
Query 134 KWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYKMPTIQFSLRGQPSPV 193
W+ L VLS V DG V A G+++W Y S+R +P+
Sbjct 135 VWRTSLPTEVLSSPQSNGSLVVAQTTDGKVLGFSATDGEKLWQYDGSVPVLSMRAAAAPL 194
Query 194 MLDDRTVVVAS-ANGYVYGIDVISGVPRFQRRVAVSEGRSDIQRLIDIDGDPVVSGQYLV 252
+ D VV+AS A+G + + SG P +Q V +GR++++RL+D+ G P+V ++
Sbjct 195 VGGD--VVIASFASGKLIALTAASGQPMWQYEVGQPQGRTELERLVDVTGQPLVIETAVM 252
Query 253 TVSYQGQVTVTDLTNLSVVWNQDASSNKRPAVYDNKVFVAQADGKLTAYDLGTGSKLWES 312
V YQG++ + D+ +W++ ASS P + ++++A ADG++ A ++W
Sbjct 253 VVGYQGKLALVDIRTGQEIWSRKASSLYSPMIGGGQIYLAAADGEIIALRGSDRREVWTQ 312
Query 313 DVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAKTRGE---VSSLRVVDGHL 369
D L RQL+ P++ LVVGD +G +H ++ + G L+G+ + E V + R+ +G+L
Sbjct 313 DRLAWRQLTQPMVYEDYLVVGDFEGYLHALDREDGSLVGQREFDDEGIRVPAQRLANGNL 372
Query 370 YTSTRKGALTIWEVR 384
G + +++V+
Sbjct 373 LVFGNSGKMAVFQVK 387
>Q0AE45 Outer membrane protein assembly factor BamB [Nitrosomonas
eutropha (strain DSM 101675 / C91 / Nm57)]
Length=409
Score = 148 bits (374), Expect = 6e-44
Identities = 93/332 (28%), Positives = 173/332 (52%), Gaps = 29/332 (9%)
Query 34 NPL--PKLAQTQTQALVPIFSQSVSSMPKADPLRLQLDTLNGVIFVPDPKG---KVSAYR 88
NPL KLA+++T +P++ NG ++V D G K+
Sbjct 74 NPLWQVKLAESKTAVFLPVYD-------------------NGALYVADEDGRLVKLDPVT 114
Query 89 GKERLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIALDQQTGQQKWKAQLTGAVLSPSL 148
G+E +W TK +L+ G AG G++++G KGE++A D+ G W++++ G VLSP
Sbjct 115 GRE-IWRVE-TKSQLSGGVGAGGGMILLGTYKGEVLAFDE-AGNALWQSRVPGEVLSPPK 171
Query 149 IYQGRVTTIANDGTVFAHDAETGQQVWTYKMPTIQFSLRGQPSPVMLDDRTVVVASANGY 208
G V D +F +A G+++W+Y+ T ++R V + V G
Sbjct 172 TDSGIVVVRTGDSKLFGLNATDGKRIWSYQSVTPPLTVRSFVG-VSITRGAVFAGFPGGK 230
Query 209 VYGIDVISGVPRFQRRVAVSEGRSDIQRLIDIDGDPVVSGQYLVTVSYQGQVTVTDLTNL 268
+ +D+++G ++ V+ G ++++R+ DI P+V + V+Y+G+ ++++
Sbjct 231 LIALDLLTGNVGWEETVSQPHGVTELERMTDISSLPIVDENQVCAVAYRGRAACFEISSG 290
Query 269 SVVWNQDASSNKRPAVYDNKVFVAQADGKLTAYDLGTGSKLWESDVLLNRQLSN-PVMLG 327
+ +W +DASS+ + ++ V++++ G + AYD +G+ +W+ L +R+LS ++ G
Sbjct 291 NQIWARDASSSMGMVIDNHHVYISEEHGIVAAYDKSSGTAVWKRGKLGSRKLSGLMIVRG 350
Query 328 KDLVVGDLDGVIHLINPDSGQLIGRAKTRGEV 359
LVVGD G + LIN G L+ R+ T G +
Sbjct 351 NRLVVGDDQGFVTLINRQDGSLLARSPTDGGI 382
>F8GAQ8 Outer membrane protein assembly factor BamB [Francisella
salina]
Length=521
Score = 149 bits (375), Expect = 3e-43
Identities = 91/292 (31%), Positives = 146/292 (50%), Gaps = 18/292 (6%)
Query 72 NGVIFVPDPKGK---VSAYRGKERLWTTRVTKHRLTAGTVAGE------GIVVVGNIKGE 122
N +FVP+ G +S GK V KH GT+ V+ G++KG
Sbjct 67 NNTVFVPNQNGVAYGLSITDGKI------VWKH--DTGTILSSQPNTIANAVIFGSVKGV 118
Query 123 LIALDQQTGQQKWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYKMPTI 182
L A+DQ+ G+ W+ ++ S IY + T +DG+V + DA G +VW
Sbjct 119 LTAVDQKDGKILWRTDAPSSIFSQPTIYSNHLYTHTHDGSVTSFDATNGSKVWNVTNNIP 178
Query 183 QFSLRGQPSPVMLDDRTVVVASANGYVYGIDVISGVPRFQRRVAVSEGRSDIQRLIDIDG 242
+ +L SP++L+D TV+V SA G V G + SG VA++ G S +++DI
Sbjct 179 EITLPSDSSPIILND-TVMVGSAFGTVLGFTLESGDRTINLPVAIAHGSSPADKMVDITA 237
Query 243 DPVVSGQYLVTVSYQGQVTVTDLTNLSVVWNQDASSNKRPAVYDNKVFVAQADGKLTAYD 302
+P++ G YL+ ++QG + D ++W + AS A+ + +F AQA+ +L AYD
Sbjct 238 NPMLYGNYLIFAAFQGAIVALDKDTGKMLWAKKASIINNMAINNGVIFTAQANSELKAYD 297
Query 303 LGTGSKLWESDVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAK 354
+ TG +W L R+++ P+ +VV D G +H N +G +GR K
Sbjct 298 IQTGDTVWTQSTLEWRKITAPIYYKGLIVVADYQGFLHFFNSLNGDYLGRYK 349
Score = 42.4 bits (98), Expect = 3e-07
Identities = 26/107 (24%), Positives = 49/107 (46%), Gaps = 6/107 (6%)
Query 279 NKRPAVYDNKVFVAQADGKLTAYDLGTGSKLWESD--VLLNRQLSNPVMLGKDLVVGDLD 336
N P +N VFV +G + G +W+ D +L+ S P + ++ G +
Sbjct 60 NVSPTYANNTVFVPNQNGVAYGLSITDGKIVWKHDTGTILS---SQPNTIANAVIFGSVK 116
Query 337 GVIHLINPDSGQLIGRAKTRGEV-SSLRVVDGHLYTSTRKGALTIWE 382
GV+ ++ G+++ R + S + HLYT T G++T ++
Sbjct 117 GVLTAVDQKDGKILWRTDAPSSIFSQPTIYSNHLYTHTHDGSVTSFD 163
Score = 33.9 bits (76), Expect = 1e-04
Identities = 23/107 (21%), Positives = 47/107 (44%), Gaps = 2/107 (2%)
Query 112 GIVVVGNIKGELIALDQQTGQQKW-KAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAET 170
G++ EL A D QTG W ++ L ++ + Y+G + G + ++
Sbjct 282 GVIFTAQANSELKAYDIQTGDTVWTQSTLEWRKITAPIYYKGLIVVADYQGFLHFFNSLN 341
Query 171 GQQVWTYKM-PTIQFSLRGQPSPVMLDDRTVVVASANGYVYGIDVIS 216
G + YK+ P F G ++ ++ +++ + +G Y +D S
Sbjct 342 GDYLGRYKLTPKSDFFDYGISGQLVPTEKGILIEADSGTTYLVDAHS 388
Score = 30.8 bits (68), Expect = 0.001
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 9/113 (8%)
Query 72 NGVIFVPDPKGKVSAY--RGKERLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIALDQQ 129
NGVIF ++ AY + + +WT + R + +G++VV + +G L +
Sbjct 281 NGVIFTAQANSELKAYDIQTGDTVWTQSTLEWRKITAPIYYKGLIVVADYQGFLHFFNSL 340
Query 130 TGQQKWKAQLTGAV------LSPSLIYQGRVTTI-ANDGTVFAHDAETGQQVW 175
G + +LT +S L+ + I A+ GT + DA + + ++
Sbjct 341 NGDYLGRYKLTPKSDFFDYGISGQLVPTEKGILIEADSGTTYLVDAHSDRVIY 393
>P77774 Outer membrane protein assembly factor BamB [Escherichia
coli (strain K12)]
Length=392
Score = 139 bits (349), Expect = 2e-40
Identities = 99/381 (26%), Positives = 176/381 (46%), Gaps = 18/381 (5%)
Query 12 IIASAALVGCTSNQVKKEEAKPNPLPKLAQTQTQALVPIFSQSVSSMPKADPLRLQLDTL 71
+++ L GC+ +++ K +PLP + T +S SV S L
Sbjct 11 LLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTA--WSTSVGSGIGNFYSNLHPALA 68
Query 72 NGVIFVPDPKGKVSAYR---GKERLWTTRVTKHR---------LTAGTVAGEGIVVVGNI 119
+ V++ D G V A GKE +W+ + + L+ G G V +G+
Sbjct 69 DNVVYAADRAGLVKALNADDGKE-IWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE 127
Query 120 KGELIALDQQTGQQKWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYKM 179
K ++ AL+ G W+ ++ G LS ++ G V ++G + A + G WT +
Sbjct 128 KAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNL 187
Query 180 PTIQFSLRGQPSPVMLDDRTVVVASANGYVYGIDVISGVPRFQRRVAVSEGRSDIQRLID 239
SLRG+ +P VV NG V + + G +Q+R++ + G ++I RL D
Sbjct 188 DMPSLSLRGESAPTTAFG-AAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSD 246
Query 240 IDGDPVVSGQYLVTVSYQGQVTVTDLTNLSVVWNQDASSNKRPAVYDNKVFVAQADGKLT 299
+D PVV + ++Y G +T DL + ++W ++ S V N++++ + ++
Sbjct 247 VDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVM 306
Query 300 AYDLGTGSKLWESDVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAK--TRG 357
A + G LW LL+R L++PV+ +LVVGD +G +H IN + G+ + + K + G
Sbjct 307 ALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSG 366
Query 358 EVSSLRVVDGHLYTSTRKGAL 378
+ DG L + G +
Sbjct 367 FQTEPVAADGKLLIQAKDGTV 387
>Q9RTJ3 Desiccation/radiation resistance protein DR_1769 [Deinococcus
radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871
/ CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422
/ R1)]
Length=574
Score = 56.6 bits (135), Expect = 9e-12
Identities = 95/385 (25%), Positives = 150/385 (39%), Gaps = 37/385 (10%)
Query 7 FPFALIIASAALVGCTSNQVKKEEAKPNPLPKLAQTQTQALVPIFSQSVSSMPKADPLRL 66
FP A + S AL+G ++ + A P P P AQT A + + P +
Sbjct 14 FPLAALALSVALLGAPASLA--QTAAPAPAP--AQTPAAASRAAAPRVSWTKPLKVSSPV 69
Query 67 QLDTLNGVIFVP-DPKGKVSAYRGKERLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIA 125
+ + +V D + + GKE LW+ + + +G V+ + A
Sbjct 70 SIGPRGELTYVGNDSRVHRTDASGKE-LWSFALGDIGRAQPVLTPDGGVITAAYDDTVYA 128
Query 126 LDQQTGQQKWKAQLTGAVL-SPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYKMPTIQF 184
L GQ WKA+L G V SP+L G V GTV+A + +GQ +W+YK+ F
Sbjct 129 LSP-AGQLTWKAKLDGDVFASPALRPDGSVVVATAGGTVYAL-SSSGQTLWSYKVGAPVF 186
Query 185 SLRGQPSPVMLDDRTVVVASANGYVYGIDVISGVPRFQRRVAVSEGRSDI--QRLIDIDG 242
S SP + D T+ + NG ++ + R RS + +D +G
Sbjct 187 S-----SPAVAADGTIYFGAQNGRLHALSPEG------RLTWTYAARSSVFSSPALDAEG 235
Query 243 DPVVSG--QYLVTVSYQGQVTVTDLTNLSVVWNQDASSNKRPAV-YDNKVFVAQADGKLT 299
+ + + ++S G + T L V N P V V V DG+L
Sbjct 236 NLYFGSGDRSIYSLSPAGTLRWVQPTGLFV--------NASPIVTRAGLVVVGSYDGQLY 287
Query 300 AYDLGTGSKLWESDVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAKTRGEV 359
A + G W + +VVGDL+G +H + P +GQ + ++
Sbjct 288 ALNT-NGQVAWTYAAGAAIAAPAAELSDGSVVVGDLNGTLHAVTP-TGQALWTLPGGAKI 345
Query 360 SSLRVV--DGHLYTSTRKGALTIWE 382
+ V G LY + G L E
Sbjct 346 DTGAAVSDQGTLYFAVDGGNLNAVE 370
Score = 22.3 bits (46), Expect = 0.51
Identities = 13/47 (28%), Positives = 19/47 (40%), Gaps = 6/47 (13%)
Query 32 KPNPLPKLAQTQTQALVPIFSQSVSSMPKADPLRLQLDTLNGVIFVP 78
+P P P T + P+ S P RL + GVI++P
Sbjct 439 RPQPTPAQPATPAAPVPPVAS------PAPATARLTPQVIGGVIYLP 479
>Q9RRH3 DNA damage-responsive serine/threonine-protein kinase
RqkA [Deinococcus radiodurans (strain ATCC 13939 / DSM 20539
/ JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279
/ VKM B-1422 / R1)]
Length=668
Score = 54.3 bits (129), Expect = 5e-11
Identities = 63/281 (22%), Positives = 107/281 (38%), Gaps = 34/281 (12%)
Query 83 KVSAYRGKERLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIALDQQTGQQKWKAQLTGA 142
+V G E +W + A TV G G ++ + G L AL +TG+ W + G+
Sbjct 382 RVELQSGSE-VWRHQARAEFTGAPTVWG-GRLLAPSRDGHLHALSLRTGELAWAYRAGGS 439
Query 143 VLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYKMPTIQFSLRGQPSPVMLDDRTVVV 202
+ + L++ G G + A DA +G +W ++ T+ + P P T+V+
Sbjct 440 LAASPLVWAGAALQCDETGWLHALDARSGTPLWKVEVGTVHATPALLPGPP--GTATLVI 497
Query 203 ASANGYVYGIDVISGVPRFQRRVAVSEGRSDIQRLIDIDGDPVVS--------------- 247
A+ G V+ I + Q A G I+ D++ + S
Sbjct 498 ATWEGEVHAIGL-----EVQNGRAALAGEDAIRWTYDVEDEVWASPALTALDLPPDSGAA 552
Query 248 -------GQYLVTVSYQGQVTVTDLTNLSVVWNQ--DASSNKRPAVYDNKVFVAQADGKL 298
G +V + G+V L + +W + D P + VF+A G+L
Sbjct 553 PDASAAPGGVVVVAGWGGKVRGLRLADGEDLWERTLDGRVTASPVISAGLVFLATEGGEL 612
Query 299 TAYDLGTGSKLWESDVLLNRQLSNPVMLGKDLVVGDLDGVI 339
A D+ G W Q + P+ L V +DG +
Sbjct 613 LALDVRNGEVRWTCRERSGVQ-ATPLAASGTLYVAFMDGTL 652
Score = 49.3 bits (116), Expect = 2e-09
Identities = 67/312 (21%), Positives = 119/312 (38%), Gaps = 33/312 (11%)
Query 92 RLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIALDQQTGQQKWKAQLTGAVLSPSLIYQ 151
R + T + +TA G V+ G G L ++ Q+G + W+ Q ++
Sbjct 349 RPFATYAARDEVTAPATLIGGHVLYGAWDGTLRRVELQSGSEVWRHQARAEFTGAPTVWG 408
Query 152 GRVTTIANDGTVFAHDAETGQQVWTYKMPTIQFSLRGQPSPVMLDDRTVVVASANGYVYG 211
GR+ + DG + A TG+ W Y+ SL P ++ + G+++
Sbjct 409 GRLLAPSRDGHLHALSLRTGELAWAYRAGG---SLAASP---LVWAGAALQCDETGWLHA 462
Query 212 IDVISGVPRFQRRV---------------------AVSEGRSDIQRLIDIDGDPVVSGQY 250
+D SG P ++ V A EG L +G ++G+
Sbjct 463 LDARSGTPLWKVEVGTVHATPALLPGPPGTATLVIATWEGEVHAIGLEVQNGRAALAGED 522
Query 251 LVTVSYQGQVTV---TDLTNLSVVWNQDASSNKRPAVYDNKVFVAQADGKLTAYDLGTGS 307
+ +Y + V LT L + + A+ + A V VA GK+ L G
Sbjct 523 AIRWTYDVEDEVWASPALTALDLPPDSGAAPD-ASAAPGGVVVVAGWGGKVRGLRLADGE 581
Query 308 KLWESDVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAKTRGEVSSLRV-VD 366
LWE L R ++PV+ + + G + ++ +G++ + R V + +
Sbjct 582 DLWER-TLDGRVTASPVISAGLVFLATEGGELLALDVRNGEVRWTCRERSGVQATPLAAS 640
Query 367 GHLYTSTRKGAL 378
G LY + G L
Sbjct 641 GTLYVAFMDGTL 652
Score = 45.4 bits (106), Expect = 3e-08
Identities = 32/96 (33%), Positives = 45/96 (47%), Gaps = 3/96 (3%)
Query 73 GVIFVPDPKGKVSAYR--GKERLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIALDQQT 130
GV+ V GKV R E LW R R+TA V G+V + GEL+ALD +
Sbjct 561 GVVVVAGWGGKVRGLRLADGEDLWE-RTLDGRVTASPVISAGLVFLATEGGELLALDVRN 619
Query 131 GQQKWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAH 166
G+ +W + V + L G + DGT+ A+
Sbjct 620 GEVRWTCRERSGVQATPLAASGTLYVAFMDGTLRAY 655
Score = 42.7 bits (99), Expect = 2e-07
Identities = 58/251 (23%), Positives = 99/251 (39%), Gaps = 26/251 (10%)
Query 73 GVIFVPDPKGKVSAY--RGKERLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIALDQQT 130
G + P G + A R E W R L A + G + + G L ALD ++
Sbjct 409 GRLLAPSRDGHLHALSLRTGELAWAYRAGGS-LAASPLVWAGAALQCDETGWLHALDARS 467
Query 131 GQQKWKAQLTGAVLSPSLIY--QGRVTTIAN--DGTVFAHDAET--------GQQV--WT 176
G WK ++ +P+L+ G T + +G V A E G+ WT
Sbjct 468 GTPLWKVEVGTVHATPALLPGPPGTATLVIATWEGEVHAIGLEVQNGRAALAGEDAIRWT 527
Query 177 YKMPTIQFSLRGQPSPVMLD--DRTVVVASANGYVYGIDVISGVPRFQRRVAVSEGRSDI 234
Y ++ + P+ LD + A+ G+ V++G R + +++G
Sbjct 528 YD---VEDEVWASPALTALDLPPDSGAAPDASAAPGGVVVVAGWGGKVRGLRLADGEDLW 584
Query 235 QRLID--IDGDPVVSGQYLVTVSYQGQVTVTDLTNLSVVWN--QDASSNKRPAVYDNKVF 290
+R +D + PV+S + + G++ D+ N V W + + P ++
Sbjct 585 ERTLDGRVTASPVISAGLVFLATEGGELLALDVRNGEVRWTCRERSGVQATPLAASGTLY 644
Query 291 VAQADGKLTAY 301
VA DG L AY
Sbjct 645 VAFMDGTLRAY 655
Score = 37.7 bits (86), Expect = 8e-06
Identities = 63/316 (20%), Positives = 120/316 (38%), Gaps = 34/316 (11%)
Query 78 PDPKGKVSAYRGKERLWTTRVTKHRLTAGTVAGEGIVVVGNIKGELIALDQQTGQQKWKA 137
PD +VS + LW+ + V GEG +V +G + L +G+
Sbjct 298 PDGPARVS---DMQELWSVALPGEVTWPAAVVGEGDLVAVGTRGGQLVLTHTSGRPFATY 354
Query 138 QLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYKMPTIQFSLRGQPSPVMLDD 197
V +P+ + G V A DGT+ + ++G +VW + Q +P +
Sbjct 355 AARDEVTAPATLIGGHVLYGAWDGTLRRVELQSGSEVWRH-----QARAEFTGAPTVWGG 409
Query 198 RTVVVASANGYVYGIDVISGVPRFQRRVAVSEGRSDIQRLIDIDGDPVVSGQYLVTVSYQ 257
R ++ S +G+++ + + +G + R S + P+V +
Sbjct 410 R-LLAPSRDGHLHALSLRTGELAWAYRAGGS-----------LAASPLVWAGAALQCDET 457
Query 258 GQVTVTDLTNLSVVWNQDASS-NKRPAVYDN-----KVFVAQADGKLTAYDL----GTGS 307
G + D + + +W + + + PA+ + +A +G++ A L G +
Sbjct 458 GWLHALDARSGTPLWKVEVGTVHATPALLPGPPGTATLVIATWEGEVHAIGLEVQNGRAA 517
Query 308 KLWESDVLLNRQLSNPVMLGKDLVVGDL---DGVIHLINPDSGQLIGRAKTRGEVSSLRV 364
E + + + V L DL G + G ++ A G+V LR+
Sbjct 518 LAGEDAIRWTYDVEDEVWASPALTALDLPPDSGAAPDASAAPGGVVVVAGWGGKVRGLRL 577
Query 365 VDGH-LYTSTRKGALT 379
DG L+ T G +T
Sbjct 578 ADGEDLWERTLDGRVT 593
>Q09499 Serine/threonine-protein kinase / Endoribonuclease [Caenorhabditis
elegans]
Length=967
Score = 49.3 bits (116), Expect = 2e-09
Identities = 51/211 (24%), Positives = 90/211 (43%), Gaps = 31/211 (15%)
Query 114 VVVGNIKGELIALDQQTGQQKWKAQLTGAVLSPSLIYQGRVTTIAN--DGTVFAHDAETG 171
++V I G L ALD +TG+ KW Q + SPS + QG T + N DG+++ +
Sbjct 45 ILVSTIDGRLRALDSETGEIKWTLQEEPVLRSPSAVKQG-FTFLPNPLDGSLYVLKNSSL 103
Query 172 QQVWTYKMPTIQFSLRGQPSPVMLDDRTVVVASANGYVYGIDVISGVPRFQRRVAVSEGR 231
+++ + +P + + SP +D + S +GID +G+
Sbjct 104 KKL-PFNIPQLVHA-----SPCKGNDGILYAGSKKDVWFGIDPKTGL------------- 144
Query 232 SDIQRLIDIDGD---PVVSGQYLVTVSYQGQVTVTDLTNLSVVWN---QDASSNKRPAV- 284
++ L D P Q + + +V++ D N WN D S++ P V
Sbjct 145 -KVETLSSASADRICPANQKQTIFLGRTEYRVSMFDEKNRGKTWNATFNDYSAHLLPEVN 203
Query 285 -YDNKVFVAQADGKLTAYDLGTGSKLWESDV 314
+ K + + + G + +D TG WE D+
Sbjct 204 TWPFKHYASSSHGYILTFDRETGEMRWEQDL 234
Score = 23.9 bits (50), Expect = 0.18
Identities = 8/29 (28%), Positives = 18/29 (62%), Gaps = 0/29 (0%)
Query 121 GELIALDQQTGQQKWKAQLTGAVLSPSLI 149
G ++ D++TG+ +W+ L V++ L+
Sbjct 216 GYILTFDRETGEMRWEQDLKQPVVALYLL 244
>Q4W6G0 Quinohemoprotein alcohol dehydrogenase ADH-IIG [Pseudomonas
putida]
Length=718
Score = 42.4 bits (98), Expect = 3e-07
Identities = 41/163 (25%), Positives = 68/163 (42%), Gaps = 32/163 (20%)
Query 47 LVPIFSQSVSSMPKADPLRLQLD--------TLNGVIFVPDPKGKVSAYRGKER--LWT- 95
L I Q+V + A +L LD ++G ++ P V A ++ +W
Sbjct 66 LKQISDQNVGQLGLAWSYKLDLDRGVEATPIVVDGAMYTTGPFSVVYALDARDGRLIWKY 125
Query 96 -TRVTKHR--------LTAGTVAGEGIVVVGNIKGELIALDQQTGQQKWKAQ-------- 138
+ +HR + G +G V VG + G L A+D +TGQ+ W
Sbjct 126 DPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRS 185
Query 139 --LTGA--VLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTY 177
+TGA V++ ++ G V A+DAETG++ W +
Sbjct 186 YTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 228
Score = 37.7 bits (86), Expect = 8e-06
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 13/95 (14%)
Query 240 IDGDPVVSGQYLVTVSYQGQVTVTDLTNLSVVWNQDASS-------------NKRPAVYD 286
++ P+V + T V D + ++W D S N+ AV+
Sbjct 91 VEATPIVVDGAMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWK 150
Query 287 NKVFVAQADGKLTAYDLGTGSKLWESDVLLNRQLS 321
KV+V DG+L A D TG + W D + + S
Sbjct 151 GKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRS 185
Score = 32.7 bits (73), Expect = 3e-04
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
Query 287 NKVFVAQADGKLTAYDLGTGSKLWE 311
N VF ADG++ AY TG KLWE
Sbjct 516 NLVFEGSADGRVIAYAADTGEKLWE 540
Score = 31.2 bits (69), Expect = 0.001
Identities = 20/61 (33%), Positives = 32/61 (52%), Gaps = 11/61 (18%)
Query 121 GELIALDQQTGQQKWKAQ----LTGAVLSP--SLIYQGRVTTIANDGTVFAHDAETGQQV 174
G+LIA D Q W+ G LS +L+++G + DG V A+ A+TG+++
Sbjct 484 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-----SADGRVIAYAADTGEKL 538
Query 175 W 175
W
Sbjct 539 W 539
Score = 30.0 bits (66), Expect = 0.002
Identities = 48/194 (25%), Positives = 69/194 (36%), Gaps = 48/194 (25%)
Query 127 DQQTGQQ----KWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYKMPTI 182
DQ GQ +K L V + ++ G + T V+A DA G+ +W Y
Sbjct 71 DQNVGQLGLAWSYKLDLDRGVEATPIVVDGAMYTTGPFSVVYALDARDGRLIWKYDPQ-- 128
Query 183 QFSLRGQPSPVMLDDRTVVVASANGYVYGIDVISGV-----PRFQRRVAVSEGRSDIQRL 237
S R + D VA G VY + V+ G + +R + R+D +R
Sbjct 129 --SDRHRAGEACCDAVNRGVAVWKGKVY-VGVLDGRLEAIDAKTGQRAWSVDTRADHKRS 185
Query 238 IDIDGDP-VVSGQYLVTVSYQGQVTVTDLTNLSVVWNQDASSNKRPAVYDNKVFVAQADG 296
I G P VV+G+ V+ N A R G
Sbjct 186 YTITGAPRVVNGKV-------------------VIGNGGAEFGVR--------------G 212
Query 297 KLTAYDLGTGSKLW 310
+TAYD TG + W
Sbjct 213 YVTAYDAETGKEAW 226
Score = 28.5 bits (62), Expect = 0.006
Identities = 34/138 (25%), Positives = 55/138 (40%), Gaps = 26/138 (19%)
Query 106 GTVAGEG-IVVVGNIKGELIALDQQTGQQKWKAQLTGAVLSPSLIY----QGRVTTIAND 160
GT++ G +V G+ G +IA TG++ W+ V++ + Y + VT +A
Sbjct 509 GTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMAGW 568
Query 161 GTVFAHDA---------ETGQQVWTYKMPTIQFSLRGQP------SPVMLDDRTVVVASA 205
G F+ A + QV TYK+ P P + +D + A A
Sbjct 569 GGAFSTFAGALSLRAGVQPYAQVLTYKLGGTAKLQEPAPRPDTPKPPALSNDTASIEAGA 628
Query 206 NGY------VYGIDVISG 217
Y +GI +SG
Sbjct 629 KLYDGYCSQCHGIHAVSG 646
Score = 27.3 bits (59), Expect = 0.015
Identities = 26/115 (23%), Positives = 44/115 (38%), Gaps = 16/115 (14%)
Query 259 QVTVTDLTNLSVVWNQ----DASSNKRPAVYDNKVFVAQADGKLTAYDLGTGSKLWESDV 314
Q++ ++ L + W+ D P V D ++ + A D G +W+ D
Sbjct 68 QISDQNVGQLGLAWSYKLDLDRGVEATPIVVDGAMYTTGPFSVVYALDARDGRLIWKYDP 127
Query 315 LLNRQLSNP-----------VMLGKDLVVGDLDGVIHLINPDSGQLIGRAKTRGE 358
+R + V GK + VG LDG + I+ +GQ TR +
Sbjct 128 QSDRHRAGEACCDAVNRGVAVWKGK-VYVGVLDGRLEAIDAKTGQRAWSVDTRAD 181
Score = 26.6 bits (57), Expect = 0.025
Identities = 24/98 (24%), Positives = 39/98 (40%), Gaps = 34/98 (35%)
Query 134 KWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTYK--------------M 179
KW++Q G L S ++ A +A+TG+ VW Y+ M
Sbjct 291 KWRSQAKGDNLFLS--------------SIVAVNADTGEYVWHYQTTPGDAWDYTATQHM 336
Query 180 PTIQFSLRGQPSPVMLDDRTVVVASANGYVYGIDVISG 217
+ + G+P V++ A NG+ Y ID +G
Sbjct 337 ILAELPIDGKPRKVLMQ------APKNGFFYVIDRATG 368
Score = 20.8 bits (42), Expect = 1.6
Identities = 20/84 (24%), Positives = 29/84 (35%), Gaps = 3/84 (4%)
Query 296 GKLTAYDLGTGSKLWESDVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAKT 355
GKL A+D WE + G + G DG + D+G+ +
Sbjct 484 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA 543
Query 356 RGEVSSLRV---VDGHLYTSTRKG 376
V + V VDG Y + G
Sbjct 544 ASGVMAAPVTYSVDGEQYVTFMAG 567
Score = 18.5 bits (36), Expect = 8.3
Identities = 8/17 (47%), Positives = 12/17 (71%), Gaps = 0/17 (0%)
Query 356 RGEVSSLRVVDGHLYTS 372
RG ++ VVDG +YT+
Sbjct 89 RGVEATPIVVDGAMYTT 105
>Q9AF95 1-butanol dehydrogenase (cytochrome c) [Thauera butanivorans
(strain ATCC 43655 / DSM 2080 / JCM 20651 / NBRC 103042
/ IAM 12574 / Bu B1211)]
Length=691
Score = 41.6 bits (96), Expect = 5e-07
Identities = 31/115 (27%), Positives = 55/115 (48%), Gaps = 15/115 (13%)
Query 34 NPLPKLAQTQTQALVPIFSQSVSSMPKADPLRLQLDTLNGVIFVPDPKGKVSAY--RGKE 91
+PL ++ + L ++S + S + + +D GV++V P V A R +
Sbjct 56 SPLAQITPDNAKELGLVWSYDLESSRGVEATPIVVD---GVMYVTAPWSVVHALDVRSGK 112
Query 92 RLWT--TRVTKHR--------LTAGTVAGEGIVVVGNIKGELIALDQQTGQQKWK 136
RLWT V + + + G EG V VG++ G L+A+D +TG++ W+
Sbjct 113 RLWTYDPEVPREKGKNACCDVVNRGVAVHEGKVFVGSLDGRLVAIDARTGKRVWE 167
Score = 41.6 bits (96), Expect = 5e-07
Identities = 24/98 (24%), Positives = 43/98 (44%), Gaps = 13/98 (13%)
Query 233 DIQRLIDIDGDPVVSGQYLVTVSYQGQVTVTDLTNLSVVWNQDASS-------------N 279
D++ ++ P+V + + V D+ + +W D N
Sbjct 76 DLESSRGVEATPIVVDGVMYVTAPWSVVHALDVRSGKRLWTYDPEVPREKGKNACCDVVN 135
Query 280 KRPAVYDNKVFVAQADGKLTAYDLGTGSKLWESDVLLN 317
+ AV++ KVFV DG+L A D TG ++WE + L++
Sbjct 136 RGVAVHEGKVFVGSLDGRLVAIDARTGKRVWERNTLID 173
Score = 35.4 bits (80), Expect = 4e-05
Identities = 29/112 (26%), Positives = 49/112 (44%), Gaps = 16/112 (14%)
Query 259 QVTVTDLTNLSVVWNQDASSNK----RPAVYDNKVFVAQADGKLTAYDLGTGSKLWESDV 314
Q+T + L +VW+ D S++ P V D ++V + A D+ +G +LW D
Sbjct 60 QITPDNAKELGLVWSYDLESSRGVEATPIVVDGVMYVTAPWSVVHALDVRSGKRLWTYDP 119
Query 315 LLNRQLSN-----------PVMLGKDLVVGDLDGVIHLINPDSGQLIGRAKT 355
+ R+ V GK + VG LDG + I+ +G+ + T
Sbjct 120 EVPREKGKNACCDVVNRGVAVHEGK-VFVGSLDGRLVAIDARTGKRVWERNT 170
Score = 29.6 bits (65), Expect = 0.003
Identities = 25/93 (27%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query 121 GELIALDQQTGQQKWKAQLTGAVLSPSLIYQGRVTTIAN-DGTVFAHDAETGQQVWTYKM 179
G LIA D ++ W+ + +L+ G V D + A DA G+++W+ M
Sbjct 471 GRLIAWDPVQQKEVWRKEHVSPWNGGTLVTAGNVVFQGTADARLLAFDARDGKELWSAPM 530
Query 180 PTIQFSLRGQPSPVMLDDRTVV-VASANGYVYG 211
T + P +D + V +A G VYG
Sbjct 531 GT---GVIAAPVTYEVDGKQYVSIAVGWGGVYG 560
Score = 26.9 bits (58), Expect = 0.019
Identities = 11/26 (42%), Positives = 15/26 (58%), Gaps = 0/26 (0%)
Query 287 NKVFVAQADGKLTAYDLGTGSKLWES 312
N VF AD +L A+D G +LW +
Sbjct 503 NVVFQGTADARLLAFDARDGKELWSA 528
Score = 25.8 bits (55), Expect = 0.044
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 24/137 (18%)
Query 148 LIYQGRVTTIANDGTVFAHDAETGQQVWTY---------KMPTIQFSLRGQPSPVMLDDR 198
++ G + A V A D +G+++WTY K RG V + +
Sbjct 88 IVVDGVMYVTAPWSVVHALDVRSGKRLWTYDPEVPREKGKNACCDVVNRG----VAVHEG 143
Query 199 TVVVASANGYVYGIDVISGVPRFQRRVAVSEGRSDIQRLIDIDGDP-VVSGQYLV----- 252
V V S +G + ID +G ++R + D + I G P V+ G+ ++
Sbjct 144 KVFVGSLDGRLVAIDARTGKRVWERNTLI-----DDDKPYTITGAPRVIKGKVVIGNGGA 198
Query 253 TVSYQGQVTVTDLTNLS 269
+G +T D T S
Sbjct 199 EFGVRGYITAYDPTAAS 215
Score = 21.2 bits (43), Expect = 1.2
Identities = 14/64 (22%), Positives = 27/64 (42%), Gaps = 8/64 (13%)
Query 162 TVFAHDAETGQQVWTYKM-PTIQFSLRGQPSPVMLD-------DRTVVVASANGYVYGID 213
++ A +TG+ VW Y+ P + ++ D + ++ A NG+ + ID
Sbjct 298 SIVALRPDTGEYVWHYQQTPADNWDYTSTQDLILADIELGGKPRKVILHAPKNGFFFVID 357
Query 214 VISG 217
G
Sbjct 358 RTDG 361
Score = 21.2 bits (43), Expect = 1.2
Identities = 25/108 (23%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query 272 WNQDASSNKRPAVYDNKVFVAQADGKLTAYDLGTGSKLWESDVLLNRQLSNPVMLGKDLV 331
WN N RP +Q G+L A+D ++W + + V G +
Sbjct 454 WNLGMLVNPRPPA-------SQPFGRLIAWDPVQQKEVWRKEHVSPWNGGTLVTAGNVVF 506
Query 332 VGDLDGVIHLINPDSGQLIGRAKTRGEVSSLRV---VDGHLYTSTRKG 376
G D + + G+ + A V + V VDG Y S G
Sbjct 507 QGTADARLLAFDARDGKELWSAPMGTGVIAAPVTYEVDGKQYVSIAVG 554
Score = 19.2 bits (38), Expect = 4.8
Identities = 13/49 (27%), Positives = 23/49 (47%), Gaps = 6/49 (12%)
Query 342 INPDSGQLIGRA------KTRGEVSSLRVVDGHLYTSTRKGALTIWEVR 384
I PD+ + +G +RG ++ VVDG +Y + + +VR
Sbjct 61 ITPDNAKELGLVWSYDLESSRGVEATPIVVDGVMYVTAPWSVVHALDVR 109
Score = 19.2 bits (38), Expect = 4.8
Identities = 8/20 (40%), Positives = 11/20 (55%), Gaps = 0/20 (0%)
Query 123 LIALDQQTGQQKWKAQLTGA 142
++AL TG+ W Q T A
Sbjct 299 IVALRPDTGEYVWHYQQTPA 318
>Q9Z4J7 Quinoprotein ethanol dehydrogenase [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=623
Score = 38.9 bits (89), Expect = 3e-06
Identities = 43/175 (25%), Positives = 71/175 (41%), Gaps = 40/175 (23%)
Query 34 NPLPKLAQTQTQALVPIFSQSVSSMPKADPLRLQLDTLNGVIFVPDPKGKVSAYRGK--E 91
+PL ++ L P +S S K Q +GVI+V ++ A K +
Sbjct 65 SPLKQVNADNVFKLTPAWSYSFGD-EKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGK 123
Query 92 RLWTTRVTKHRL-----------TAGTVAGEGIVVVGNIKGELIALDQQTGQQKWKAQ-- 138
RLWT HRL G V G + ++AL++ TG+ WK +
Sbjct 124 RLWTYN---HRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFA 180
Query 139 -------LTGAVLSPSLIYQGRVTTI------AND-----GTVFAHDAETGQQVW 175
+TGA P+++ G+ + + D G +FA D +TG+++W
Sbjct 181 DHGAGYTMTGA---PTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW 232
Score = 37.7 bits (86), Expect = 8e-06
Identities = 44/174 (25%), Positives = 76/174 (44%), Gaps = 13/174 (7%)
Query 7 FPFALIIASAALVGCTSNQVKKEEAKPNPLPKLAQTQTQALVPIFSQSVSSMPKADPLRL 66
FPF I A+ + + + + E + PLP+ Q +A+ S +P+
Sbjct 396 FPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVE--VSPPFLGGKNWNPMAY 453
Query 67 QLDTLNGVIFVPDPKGKVSAYRGKERLWTTRVTKHRLTAGTVAGEGIV-VVGNIKGELIA 125
DT G+ +VP A KE WT V+ + +A G I + + G L A
Sbjct 454 SQDT--GLFYVP-------ANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRA 504
Query 126 LDQQTGQQKWKAQLTGAVLSPSLIYQGR-VTTIANDGTVFAHDAETGQQVWTYK 178
+D +G+ W+ + + + L G V T DG A DA++G+++W ++
Sbjct 505 MDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 558
Score = 34.3 bits (77), Expect = 1e-04
Identities = 17/47 (36%), Positives = 29/47 (62%), Gaps = 5/47 (11%)
Query 131 GQQKWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTY 177
G +K + Q + A++S +IY A+ +FA DA+TG+++WTY
Sbjct 87 GDEKQRGQESQAIVSDGVIY-----VTASYSRLFALDAKTGKRLWTY 128
Score = 34.3 bits (77), Expect = 1e-04
Identities = 24/94 (26%), Positives = 36/94 (38%), Gaps = 15/94 (16%)
Query 103 LTAGTVAGEG-IVVVGNIKGELIALDQQTGQQKWKAQLTGAVLSPSLI------------ 149
L AG +A G +V G G A D ++G++ WK Q ++SP +
Sbjct 522 LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 581
Query 150 --YQGRVTTIANDGTVFAHDAETGQQVWTYKMPT 181
Y G V D G W +K+P+
Sbjct 582 VGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLPS 615
Score = 32.0 bits (71), Expect = 5e-04
Identities = 23/110 (21%), Positives = 45/110 (41%), Gaps = 14/110 (13%)
Query 259 QVTVTDLTNLSVVWNQDASSNKRPA------VYDNKVFVAQADGKLTAYDLGTGSKLWES 312
QV ++ L+ W+ K+ V D ++V + +L A D TG +LW
Sbjct 69 QVNADNVFKLTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTY 128
Query 313 DVLLNRQL--------SNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAK 354
+ L + + G + G LD + +N ++G+++ + K
Sbjct 129 NHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKK 178
Score = 32.0 bits (71), Expect = 5e-04
Identities = 27/119 (23%), Positives = 53/119 (45%), Gaps = 15/119 (13%)
Query 108 VAGEGIVVVGNIKGELIALDQQTGQQKWK---------AQLTGAVLSPSLIYQGRVTTIA 158
+ +G++ V L ALD +TG++ W V + IY +V
Sbjct 99 IVSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT 158
Query 159 NDGTVFAHDAETGQQVWTYKMPT--IQFSLRGQPSPVMLDDRT---VVVASANGYVYGI 212
D +V A + TG+ VW K +++ G P+ ++ D +T +++ ++G +G+
Sbjct 159 LDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPT-IVKDGKTGKVLLIHGSSGDEFGV 216
Score = 32.0 bits (71), Expect = 5e-04
Identities = 30/115 (26%), Positives = 49/115 (43%), Gaps = 11/115 (10%)
Query 279 NKRPAVYDNKVFVAQADGKLTAYDLGTGSKLWESDVLLNRQLSNPVMLGKDLVVGD-LDG 337
N+ A+Y +KVF D + A + TG +W+ + + M G +V D G
Sbjct 144 NRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHG--AGYTMTGAPTIVKDGKTG 201
Query 338 VIHLINPDS-------GQLIGRAKTRGEVSSLR-VVDGHLYTSTRKGALTIWEVR 384
+ LI+ S G+L R GE +R V+GH+ K + +V+
Sbjct 202 KVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVK 256
Score = 26.6 bits (57), Expect = 0.025
Identities = 11/29 (38%), Positives = 15/29 (52%), Gaps = 0/29 (0%)
Query 283 AVYDNKVFVAQADGKLTAYDLGTGSKLWE 311
A N VF DG A+D +G +LW+
Sbjct 528 ATAGNLVFTGTGDGYFKAFDAKSGKELWK 556
>A8R3S4 Quinoprotein ethanol dehydrogenase [Pseudomonas putida]
Length=623
Score = 38.9 bits (89), Expect = 3e-06
Identities = 48/180 (27%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query 3 IKYKFPFALIIASAALVGC-TSNQVKKEEAKP-NPLPKLAQTQTQALVPIFSQSVSSMPK 60
+K FPF I A+ + T V+ E +P PLP + + + P F +
Sbjct 392 LKNAFPFVDNITWASHIDLKTGRPVENEGQRPAKPLPGETKGKPVEVSPPFLGGKNW--- 448
Query 61 ADPLRLQLDTLNGVIFVPDPKGKVSAYRGKERLWTTRVTKHRLTAGTVAGEGIV-VVGNI 119
+P+ DT G+ +VP A KE WT V + +A G I + +
Sbjct 449 -NPMAYSQDT--GLFYVP-------ANHWKEEYWTEEVNYKKGSAYLGIGFRIKRMYEDH 498
Query 120 KGELIALDQQTGQQKWKAQLTGAVLSPSLIYQGR-VTTIANDGTVFAHDAETGQQVWTYK 178
G L A+D TG+ W+ + + L +G V T DG A +A+TG+++W ++
Sbjct 499 VGSLRAMDPTTGKVVWEHNERLPLWAGVLATKGNLVFTGTGDGYFKAFNAKTGEELWKFQ 558
Score = 37.4 bits (85), Expect = 1e-05
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 39/137 (28%)
Query 72 NGVIFVPDPKGKVSAYRGK--ERLWTTRVTKHRLTAGT-----VAGEGIVVVGN------ 118
+GVI+V +V A K RLWT HRL V G + G+
Sbjct 102 DGVIYVTGSYSRVFALDAKTGRRLWTYN---HRLPDNIRPCCDVVNRGAAIFGDKIYFGT 158
Query 119 IKGELIALDQQTGQQKWKAQ---------LTGAVLSPSLIYQ---GRVTTIAND------ 160
+ +IAL++ TG+ W + +TGA P+LI G+V I
Sbjct 159 LDARVIALNKDTGKVVWNKKFGDHSAGYTMTGA---PTLIKDQKSGKVLLIHGSSGDEFG 215
Query 161 --GTVFAHDAETGQQVW 175
G ++A D ETG++VW
Sbjct 216 VVGQLYARDPETGEEVW 232
Score = 34.3 bits (77), Expect = 1e-04
Identities = 24/93 (26%), Positives = 36/93 (39%), Gaps = 15/93 (16%)
Query 103 LTAGTVAGEG-IVVVGNIKGELIALDQQTGQQKWKAQLTGAVLSPSLI------------ 149
L AG +A +G +V G G A + +TG++ WK Q ++SP +
Sbjct 522 LWAGVLATKGNLVFTGTGDGYFKAFNAKTGEELWKFQTGSGIVSPPITWEQDGEQYIGVT 581
Query 150 --YQGRVTTIANDGTVFAHDAETGQQVWTYKMP 180
Y G V D G W +K+P
Sbjct 582 VGYGGAVPLWGGDMAELTKPVAQGGSFWVFKIP 614
Score = 32.0 bits (71), Expect = 5e-04
Identities = 15/47 (32%), Positives = 28/47 (60%), Gaps = 5/47 (11%)
Query 131 GQQKWKAQLTGAVLSPSLIYQGRVTTIANDGTVFAHDAETGQQVWTY 177
G ++ + Q + A+++ +IY + VFA DA+TG+++WTY
Sbjct 87 GDERQRGQESQAIINDGVIY-----VTGSYSRVFALDAKTGRRLWTY 128
Score = 30.8 bits (68), Expect = 0.001
Identities = 25/123 (20%), Positives = 49/123 (40%), Gaps = 23/123 (19%)
Query 108 VAGEGIVVVGNIKGELIALDQQTGQQKW--------------KAQLTGAVLSPSLIYQGR 153
+ +G++ V + ALD +TG++ W GA + IY G
Sbjct 99 IINDGVIYVTGSYSRVFALDAKTGRRLWTYNHRLPDNIRPCCDVVNRGAAIFGDKIYFGT 158
Query 154 VTTIANDGTVFAHDAETGQQVWTYKMPTIQFSLRGQPSPVMLDD----RTVVVASANGYV 209
+ D V A + +TG+ VW K +P ++ D + +++ ++G
Sbjct 159 L-----DARVIALNKDTGKVVWNKKFGDHSAGYTMTGAPTLIKDQKSGKVLLIHGSSGDE 213
Query 210 YGI 212
+G+
Sbjct 214 FGV 216
Score = 29.6 bits (65), Expect = 0.003
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query 279 NKRPAVYDNKVFVAQADGKLTAYDLGTGSKLWESDVLLNRQLSNPVMLGKDLVVGD-LDG 337
N+ A++ +K++ D ++ A + TG +W + M G ++ D G
Sbjct 144 NRGAAIFGDKIYFGTLDARVIALNKDTGKVVWNKK--FGDHSAGYTMTGAPTLIKDQKSG 201
Query 338 VIHLINPDS-------GQLIGRAKTRGEVSSLR-VVDGHL 369
+ LI+ S GQL R GE +R V+GH+
Sbjct 202 KVLLIHGSSGDEFGVVGQLYARDPETGEEVWMRPFVEGHM 241
Score = 28.1 bits (61), Expect = 0.008
Identities = 18/60 (30%), Positives = 25/60 (42%), Gaps = 9/60 (15%)
Query 258 GQVTVTDLTNLSVVWNQDASSNKRP------AVYDNKVFVAQADGKLTAYDLGTGSKLWE 311
G + D T VVW + + P A N VF DG A++ TG +LW+
Sbjct 500 GSLRAMDPTTGKVVWEHN---ERLPLWAGVLATKGNLVFTGTGDGYFKAFNAKTGEELWK 556
Score = 25.0 bits (53), Expect = 0.075
Identities = 57/262 (22%), Positives = 89/262 (34%), Gaps = 48/262 (18%)
Query 167 DAETGQQVWTYK-MPTIQFSLRGQPSPVMLD--------DRTVVVASANGYVYGIDVISG 217
D TG+ W Y+ P + G V+ D + A NG+ Y +D +G
Sbjct 331 DPTTGEVKWFYQHTPNDAWDFSGNNELVLFDYKDKDGKQYKATAHADRNGFFYVVDRTNG 390
Query 218 -----------------VPRFQRRVAVSEGRSDIQRLI-DIDGDPV-VSGQYLVTVSYQG 258
+ R +EG+ + L + G PV VS +L ++
Sbjct 391 KLKNAFPFVDNITWASHIDLKTGRPVENEGQRPAKPLPGETKGKPVEVSPPFLGGKNWNP 450
Query 259 QVTVTDLTNLSVV---------WNQDASSNKRPAV----YDNKVFVAQADGKLTAYDLGT 305
D T L V W ++ + K A + K G L A D T
Sbjct 451 MAYSQD-TGLFYVPANHWKEEYWTEEVNYKKGSAYLGIGFRIKRMYEDHVGSLRAMDPTT 509
Query 306 GSKLWESDVLLNRQLSNPVMLGKDLVVGDLDGVIHLINPDSGQLIGRAKTRGEVSSLRVV 365
G +WE + L G + G DG N +G+ + + +T + S +
Sbjct 510 GKVVWEHNERLPLWAGVLATKGNLVFTGTGDGYFKAFNAKTGEELWKFQTGSGIVSPPIT 569
Query 366 ---DGHLY---TSTRKGALTIW 381
DG Y T GA+ +W
Sbjct 570 WEQDGEQYIGVTVGYGGAVPLW 591
Lambda K H a alpha
0.318 0.135 0.391 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2780550
Database: e57a790f32cecaebc1799272f4b974f4.SwissProt.fasta
Posted date: May 19, 2024 8:03 PM
Number of letters in database: 9,286
Number of sequences in database: 18
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
