BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 4f224020bef5fdc8d2f4d370884b60bb.SwissProt.fasta
15 sequences; 5,341 total letters
Query= ACIAD0591
Length=345
Score E
Sequences producing significant alignments: (Bits) Value
Q6FEJ3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ac... 690 0.0
B2HYN4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ac... 592 0.0
A3M8S1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ac... 589 0.0
B0V628 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ac... 588 0.0
B7I973 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ac... 588 0.0
B7GWL7 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ac... 588 0.0
B0VRB1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ac... 583 0.0
A5WGS3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ps... 414 4e-148
Q4FRV6 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ps... 402 3e-143
Q1QAG2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ps... 393 9e-140
A1S7P3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sh... 383 1e-136
Q8ECM2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sh... 380 2e-135
P0A7F9 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Es... 371 1e-131
A8AYK5 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [St... 278 3e-95
Q9WZ44 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Th... 272 4e-93
>Q6FEJ3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=344
Score = 690 bits (1780), Expect = 0.0
Identities = 344/344 (100%), Positives = 344/344 (100%), Gaps = 0/344 (0%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHGHYHDHAFTDILDLINDGDLLVLNDT 60
MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHGHYHDHAFTDILDLINDGDLLVLNDT
Sbjct 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHGHYHDHAFTDILDLINDGDLLVLNDT 60
Query 61 KVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQGR 120
KVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQGR
Sbjct 61 KVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQGR 120
Query 121 HENLFVVEFSEPILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAAPTAS 180
HENLFVVEFSEPILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAAPTAS
Sbjct 121 HENLFVVEFSEPILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAAPTAS 180
Query 181 LHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAELIRQ 240
LHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAELIRQ
Sbjct 181 LHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAELIRQ 240
Query 241 TKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLITNFHLP 300
TKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLITNFHLP
Sbjct 241 TKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLITNFHLP 300
Query 301 ESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLIDQAV 344
ESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLIDQAV
Sbjct 301 ESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLIDQAV 344
>B2HYN4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii (strain ACICU)]
Length=345
Score = 592 bits (1525), Expect = 0.0
Identities = 288/342 (84%), Positives = 319/342 (93%), Gaps = 0/342 (0%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHGHYHDHAFTDILDLINDGDLLVLNDT 60
MQLSDF+F+LPDELIARYPL+TRSASRLLHLDA G YHDH FTDI+DL +GDLLVLNDT
Sbjct 1 MQLSDFSFELPDELIARYPLETRSASRLLHLDAKGQYHDHMFTDIIDLFEEGDLLVLNDT 60
Query 61 KVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQGR 120
KVMKARLKGKRA+GGAIEILVERML++ A+CHIKASN+PKAGAELFVGE+ I V V+GR
Sbjct 61 KVMKARLKGKRATGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFVGEDNIPVIVRGR 120
Query 121 HENLFVVEFSEPILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAAPTAS 180
HENLFVVEFS+PIL VL++YGQLPIPPYFNREAEEIDTERYQTVFH+P+KIASVAAPTAS
Sbjct 121 HENLFVVEFSQPILPVLEQYGQLPIPPYFNREAEEIDTERYQTVFHNPEKIASVAAPTAS 180
Query 181 LHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAELIRQ 240
LHFD++LL KL K ++KTFVTLHVGAGTFMPVRTDDI NH+MHSEWCDVP+ T +LI
Sbjct 181 LHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNHVMHSEWCDVPQETIDLILA 240
Query 241 TKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLITNFHLP 300
TKARGNKVIAVGTTATRALESAAQA+GGKI AWTGDTQIFIYPGY+FC+VDRLITNFHLP
Sbjct 241 TKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFIYPGYEFCIVDRLITNFHLP 300
Query 301 ESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLIDQ 342
ESTLLMLVSALSNR NIL+AYEHAV+ +YRFFSYGDAMLID+
Sbjct 301 ESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLIDK 342
Score = 17.3 bits (33), Expect = 9.1
Identities = 12/61 (20%), Positives = 27/61 (44%), Gaps = 4/61 (7%)
Query 6 FNFDLPDELIARYPLDTRSASRLLHLDAHGHY----HDHAFTDILDLINDGDLLVLNDTK 61
+ F + D LI + L + L+ ++ ++HA D + GD ++++ +
Sbjct 285 YEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLIDKLE 344
Query 62 V 62
V
Sbjct 345 V 345
>A3M8S1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG
1025 / NCDC KC755 / 5377)]
Length=345
Score = 589 bits (1519), Expect = 0.0
Identities = 287/342 (84%), Positives = 318/342 (93%), Gaps = 0/342 (0%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHGHYHDHAFTDILDLINDGDLLVLNDT 60
MQLSDF+F+LPDELIARYPL+TRSASRLLHLDA G YHDH FTDI+DL +GDLLVLNDT
Sbjct 1 MQLSDFSFELPDELIARYPLETRSASRLLHLDAKGQYHDHMFTDIIDLFEEGDLLVLNDT 60
Query 61 KVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQGR 120
KVMKARLKGKRA+GGAIEILVERML++ A+CHIKASN+PKAGAELFVG + I V V+GR
Sbjct 61 KVMKARLKGKRATGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFVGADNIPVIVRGR 120
Query 121 HENLFVVEFSEPILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAAPTAS 180
HENLFVVEFS+PIL VL++YGQLPIPPYFNREAEEIDTERYQTVFH+P+KIASVAAPTAS
Sbjct 121 HENLFVVEFSQPILPVLEQYGQLPIPPYFNREAEEIDTERYQTVFHNPEKIASVAAPTAS 180
Query 181 LHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAELIRQ 240
LHFD++LL KL K ++KTFVTLHVGAGTFMPVRTDDI NH+MHSEWCDVP+ T +LI
Sbjct 181 LHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNHVMHSEWCDVPQETIDLILA 240
Query 241 TKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLITNFHLP 300
TKARGNKVIAVGTTATRALESAAQA+GGKI AWTGDTQIFIYPGY+FC+VDRLITNFHLP
Sbjct 241 TKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFIYPGYEFCIVDRLITNFHLP 300
Query 301 ESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLIDQ 342
ESTLLMLVSALSNR NIL+AYEHAV+ +YRFFSYGDAMLID+
Sbjct 301 ESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLIDK 342
Score = 17.3 bits (33), Expect = 9.1
Identities = 12/61 (20%), Positives = 27/61 (44%), Gaps = 4/61 (7%)
Query 6 FNFDLPDELIARYPLDTRSASRLLHLDAHGHY----HDHAFTDILDLINDGDLLVLNDTK 61
+ F + D LI + L + L+ ++ ++HA D + GD ++++ +
Sbjct 285 YEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLIDKLE 344
Query 62 V 62
V
Sbjct 345 V 345
>B0V628 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii (strain AYE)]
Length=345
Score = 588 bits (1515), Expect = 0.0
Identities = 286/342 (84%), Positives = 318/342 (93%), Gaps = 0/342 (0%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHGHYHDHAFTDILDLINDGDLLVLNDT 60
MQLSDF+F+LPDELIARYPL+TRSASRLLHLDA G YHDH FTDI+DL +GDLLVLNDT
Sbjct 1 MQLSDFSFELPDELIARYPLETRSASRLLHLDAKGQYHDHMFTDIIDLFEEGDLLVLNDT 60
Query 61 KVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQGR 120
KVMKARLKGKRA+GGAIEILVERML++ A+CHIKASN+PKAGAELFVG + I V V+GR
Sbjct 61 KVMKARLKGKRATGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFVGADNIPVIVRGR 120
Query 121 HENLFVVEFSEPILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAAPTAS 180
HENLFVVEFS+PIL VL++YGQLPIPPYFNREAEEIDTERYQTVFH+P+KIASVAAPTAS
Sbjct 121 HENLFVVEFSQPILPVLEQYGQLPIPPYFNREAEEIDTERYQTVFHNPEKIASVAAPTAS 180
Query 181 LHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAELIRQ 240
LHFD++LL +L K ++KTFVTLHVGAGTFMPVRTDDI NH+MHSEWCDVP+ T +LI
Sbjct 181 LHFDEELLAELDQKGVKKTFVTLHVGAGTFMPVRTDDITNHVMHSEWCDVPQETIDLILA 240
Query 241 TKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLITNFHLP 300
TKARGNKVIAVGTTATRALESAAQA+GGKI AWTGDTQIFIYPGY+FC+VDRLITNFHLP
Sbjct 241 TKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFIYPGYEFCIVDRLITNFHLP 300
Query 301 ESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLIDQ 342
ESTLLMLVSALSNR NIL+AYEHAV+ +YRFFSYGDAMLID+
Sbjct 301 ESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLIDK 342
Score = 17.3 bits (33), Expect = 9.1
Identities = 12/61 (20%), Positives = 27/61 (44%), Gaps = 4/61 (7%)
Query 6 FNFDLPDELIARYPLDTRSASRLLHLDAHGHY----HDHAFTDILDLINDGDLLVLNDTK 61
+ F + D LI + L + L+ ++ ++HA D + GD ++++ +
Sbjct 285 YEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLIDKLE 344
Query 62 V 62
V
Sbjct 345 V 345
>B7I973 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii (strain AB0057)]
Length=345
Score = 588 bits (1515), Expect = 0.0
Identities = 286/342 (84%), Positives = 318/342 (93%), Gaps = 0/342 (0%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHGHYHDHAFTDILDLINDGDLLVLNDT 60
MQLSDF+F+LPDELIARYPL+TRSASRLLHLDA G YHDH FTDI+DL +GDLLVLNDT
Sbjct 1 MQLSDFSFELPDELIARYPLETRSASRLLHLDAKGQYHDHMFTDIIDLFEEGDLLVLNDT 60
Query 61 KVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQGR 120
KVMKARLKGKRA+GGAIEILVERML++ A+CHIKASN+PKAGAELFVG + I V V+GR
Sbjct 61 KVMKARLKGKRATGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFVGADNIPVIVRGR 120
Query 121 HENLFVVEFSEPILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAAPTAS 180
HENLFVVEFS+PIL VL++YGQLPIPPYFNREAEEIDTERYQTVFH+P+KIASVAAPTAS
Sbjct 121 HENLFVVEFSQPILPVLEQYGQLPIPPYFNREAEEIDTERYQTVFHNPEKIASVAAPTAS 180
Query 181 LHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAELIRQ 240
LHFD++LL +L K ++KTFVTLHVGAGTFMPVRTDDI NH+MHSEWCDVP+ T +LI
Sbjct 181 LHFDEELLAELDQKGVKKTFVTLHVGAGTFMPVRTDDITNHVMHSEWCDVPQETIDLILA 240
Query 241 TKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLITNFHLP 300
TKARGNKVIAVGTTATRALESAAQA+GGKI AWTGDTQIFIYPGY+FC+VDRLITNFHLP
Sbjct 241 TKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFIYPGYEFCIVDRLITNFHLP 300
Query 301 ESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLIDQ 342
ESTLLMLVSALSNR NIL+AYEHAV+ +YRFFSYGDAMLID+
Sbjct 301 ESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLIDK 342
Score = 17.3 bits (33), Expect = 9.1
Identities = 12/61 (20%), Positives = 27/61 (44%), Gaps = 4/61 (7%)
Query 6 FNFDLPDELIARYPLDTRSASRLLHLDAHGHY----HDHAFTDILDLINDGDLLVLNDTK 61
+ F + D LI + L + L+ ++ ++HA D + GD ++++ +
Sbjct 285 YEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLIDKLE 344
Query 62 V 62
V
Sbjct 345 V 345
>B7GWL7 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii (strain AB307-0294)]
Length=345
Score = 588 bits (1515), Expect = 0.0
Identities = 286/342 (84%), Positives = 318/342 (93%), Gaps = 0/342 (0%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHGHYHDHAFTDILDLINDGDLLVLNDT 60
MQLSDF+F+LPDELIARYPL+TRSASRLLHLDA G YHDH FTDI+DL +GDLLVLNDT
Sbjct 1 MQLSDFSFELPDELIARYPLETRSASRLLHLDAKGQYHDHMFTDIIDLFEEGDLLVLNDT 60
Query 61 KVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQGR 120
KVMKARLKGKRA+GGAIEILVERML++ A+CHIKASN+PKAGAELFVG + I V V+GR
Sbjct 61 KVMKARLKGKRATGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFVGADNIPVIVRGR 120
Query 121 HENLFVVEFSEPILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAAPTAS 180
HENLFVVEFS+PIL VL++YGQLPIPPYFNREAEEIDTERYQTVFH+P+KIASVAAPTAS
Sbjct 121 HENLFVVEFSQPILPVLEQYGQLPIPPYFNREAEEIDTERYQTVFHNPEKIASVAAPTAS 180
Query 181 LHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAELIRQ 240
LHFD++LL +L K ++KTFVTLHVGAGTFMPVRTDDI NH+MHSEWCDVP+ T +LI
Sbjct 181 LHFDEELLAELDQKGVKKTFVTLHVGAGTFMPVRTDDITNHVMHSEWCDVPQETIDLILA 240
Query 241 TKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLITNFHLP 300
TKARGNKVIAVGTTATRALESAAQA+GGKI AWTGDTQIFIYPGY+FC+VDRLITNFHLP
Sbjct 241 TKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFIYPGYEFCIVDRLITNFHLP 300
Query 301 ESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLIDQ 342
ESTLLMLVSALSNR NIL+AYEHAV+ +YRFFSYGDAMLID+
Sbjct 301 ESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLIDK 342
Score = 17.3 bits (33), Expect = 9.1
Identities = 12/61 (20%), Positives = 27/61 (44%), Gaps = 4/61 (7%)
Query 6 FNFDLPDELIARYPLDTRSASRLLHLDAHGHY----HDHAFTDILDLINDGDLLVLNDTK 61
+ F + D LI + L + L+ ++ ++HA D + GD ++++ +
Sbjct 285 YEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLIDKLE 344
Query 62 V 62
V
Sbjct 345 V 345
>B0VRB1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii (strain SDF)]
Length=351
Score = 583 bits (1503), Expect = 0.0
Identities = 284/342 (83%), Positives = 315/342 (92%), Gaps = 0/342 (0%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHGHYHDHAFTDILDLINDGDLLVLNDT 60
MQLSDF+F+LPDELIARYPL+TRSASRLLHLDA G YHDH FTDI+DL +GDLLVLNDT
Sbjct 1 MQLSDFSFELPDELIARYPLETRSASRLLHLDAKGQYHDHMFTDIIDLFEEGDLLVLNDT 60
Query 61 KVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQGR 120
KVMKARLKGKR +GGAIEILVERM ++ A+CHIKASN+PKAGAELFVG + I V V+GR
Sbjct 61 KVMKARLKGKRTTGGAIEILVERMPNHTTAYCHIKASNSPKAGAELFVGADNIPVIVRGR 120
Query 121 HENLFVVEFSEPILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAAPTAS 180
HENLFVVEFS+PIL VL++YGQLPIPPYFNREAEEIDTERYQTVFH+P+KIASVAAPTAS
Sbjct 121 HENLFVVEFSQPILPVLEQYGQLPIPPYFNREAEEIDTERYQTVFHNPEKIASVAAPTAS 180
Query 181 LHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAELIRQ 240
LHFD++LL KL K ++KTFVTLHVGAGTFMPVRTDDI NH+MHSEWCDVP+ T +LI
Sbjct 181 LHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNHVMHSEWCDVPQETIDLILA 240
Query 241 TKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLITNFHLP 300
TKARGNKVIAVGTTATRALESAAQA+GGKI AWTGDTQIFIYPGY+FC+VDRLITNFHLP
Sbjct 241 TKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFIYPGYEFCIVDRLITNFHLP 300
Query 301 ESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLIDQ 342
ESTLLMLVSALSNR NIL+AYEHAV+ +Y FFSYGDAMLID+
Sbjct 301 ESTLLMLVSALSNRENILAAYEHAVKDRYHFFSYGDAMLIDK 342
Score = 22.3 bits (46), Expect = 0.24
Identities = 14/66 (21%), Positives = 31/66 (47%), Gaps = 4/66 (6%)
Query 6 FNFDLPDELIARYPLDTRSASRLLHLDAHGHY----HDHAFTDILDLINDGDLLVLNDTK 61
+ F + D LI + L + L+ ++ ++HA D + GD ++++ +
Sbjct 285 YEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYHFFSYGDAMLIDKLE 344
Query 62 VMKARL 67
V+K +L
Sbjct 345 VLKLKL 350
>A5WGS3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychrobacter sp. (strain PRwf-1)]
Length=390
Score = 414 bits (1064), Expect = 4e-148
Identities = 204/362 (56%), Positives = 265/362 (73%), Gaps = 20/362 (6%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHGH----YHDHAFTDILDLINDGDLLV 56
+ ++D+++DLPDE IARYPL RSASRL++L A D F+D+ +L+ GDL+V
Sbjct 27 LSVADYDYDLPDEYIARYPLAERSASRLMYLPAQKENTAVIQDRQFSDLPELLQAGDLIV 86
Query 57 LNDTKVMKARLKGKRASGGAIEILVERMLDN-------------QIAHCHIKASNTPKAG 103
NDTKVMKARL G++ +GG +E+LVER+ D+ +A CH++AS PK G
Sbjct 87 FNDTKVMKARLFGQKDTGGKVEVLVERLTDDTEFTTDESGQSFDNVALCHVRASKAPKLG 146
Query 104 AELFVGENGIKVTVQGRHENLFVVEFSEPILSVLDRYGQLPIPPYFNREAEEIDTERYQT 163
L +G+ I+ + GRHENLF++ F PIL L++YG+LPIPPYF R A+E D RYQT
Sbjct 147 QRLVLGDGNIECVMIGRHENLFILSFKNPILPDLEQYGELPIPPYFERHADETDNVRYQT 206
Query 164 VFHDPQKIASVAAPTASLHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIM 223
VFHDP K+ASVAAPTASLHFD +L++LA K I +VTLHVGAGTF PV+TD++ NH M
Sbjct 207 VFHDPTKLASVAAPTASLHFDDKVLKQLADKGINTAYVTLHVGAGTFAPVKTDNLLNHTM 266
Query 224 HSEWCDVPESTAELIRQTKARGNKVIAVGTTATRALESAAQANG---GKIDAWTGDTQIF 280
HSE+ ++P++TA+LI QT GNKVIA+GTT TR LE+A Q G I W+GDT IF
Sbjct 267 HSEYANLPQATADLINQTHQNGNKVIAIGTTVTRVLETAYQKTADEHGHISTWSGDTDIF 326
Query 281 IYPGYQFCVVDRLITNFHLPESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLI 340
IYPG++F V+D+L+TNFHLP+STLLMLVSA + + NI AYEHAV KYRFFSYGDAML+
Sbjct 327 IYPGFKFGVIDKLLTNFHLPKSTLLMLVSAFAGKANIEQAYEHAVAQKYRFFSYGDAMLL 386
Query 341 DQ 342
++
Sbjct 387 ER 388
>Q4FRV6 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychrobacter arcticus (strain DSM 17307 / VKM B-2377 / 273-4)]
Length=403
Score = 402 bits (1033), Expect = 3e-143
Identities = 204/376 (54%), Positives = 268/376 (71%), Gaps = 32/376 (9%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHL---DAHGHYHDHAFTDILDLINDGDLLVL 57
+ + D++++LPD+LIARYPL RSAS+LL+L +A+ D F+++ D++N GDL+V
Sbjct 27 LSVDDYDYELPDQLIARYPLAQRSASKLLYLPTNNANSQVEDKLFSELPDILNAGDLIVF 86
Query 58 NDTKVMKARLKGKRASGGAIEILVERML--------------------------DNQIAH 91
NDTKVMKARL G++ +GG IE+L+ER++ + IA
Sbjct 87 NDTKVMKARLFGQKDTGGKIEVLIERLVSLSDVNSAYLDEIIANSKTIDTTIIAEKHIAL 146
Query 92 CHIKASNTPKAGAELFVGENGIKVTVQGRHENLFVVEFSEPILSVLDRYGQLPIPPYFNR 151
CHIKAS K G L + + + + GR ENLF++ F PIL L++YG+LPIPPYF R
Sbjct 147 CHIKASKALKLGQGLVLADGHMTGIMIGRQENLFILAFDTPILPDLEQYGELPIPPYFER 206
Query 152 EAEEIDTERYQTVFHDPQKIASVAAPTASLHFDQDLLEKLAAKNIQKTFVTLHVGAGTFM 211
A+ D RYQTVFHDP K+ASVAAPTASLHFD +LEKLAAK IQ FVTLHVGAGTF
Sbjct 207 HADATDNTRYQTVFHDPAKLASVAAPTASLHFDDIVLEKLAAKGIQTAFVTLHVGAGTFA 266
Query 212 PVRTDDIKNHIMHSEWCDVPESTAELIRQTKARGNKVIAVGTTATRALESAAQ---ANGG 268
PV+TD++ NH MHSE+ +P++TAELI QT A G +VIA+GTT TR LE+A Q +G
Sbjct 267 PVKTDNLLNHTMHSEYAHLPQATAELINQTHANGKQVIAIGTTVTRVLETAYQQTAVDGQ 326
Query 269 KIDAWTGDTQIFIYPGYQFCVVDRLITNFHLPESTLLMLVSALSNRNNILSAYEHAVQSK 328
+ W+GDT IFIYPG++F VVD+L+TNFHLP+STLLMLVSA + + +I AY+HA++S+
Sbjct 327 SLSGWSGDTDIFIYPGFKFGVVDKLLTNFHLPKSTLLMLVSAFATKKSIEQAYQHAIKSQ 386
Query 329 YRFFSYGDAMLIDQAV 344
YRFFSYGDAML+D+ V
Sbjct 387 YRFFSYGDAMLLDKQV 402
>Q1QAG2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychrobacter cryohalolentis (strain ATCC BAA-1226 / DSM 17306
/ VKM B-2378 / K5)]
Length=405
Score = 393 bits (1010), Expect = 9e-140
Identities = 200/378 (53%), Positives = 265/378 (70%), Gaps = 34/378 (9%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHG-----HYHDHAFTDILDLINDGDLL 55
+ + D++++LPD+LIARYPL RSAS+LL+L A+ D F+++ +L+N GDL+
Sbjct 27 LSVDDYDYELPDQLIARYPLAQRSASKLLYLRANNANSQVEVEDKLFSELPELLNAGDLI 86
Query 56 VLNDTKVMKARLKGKRASGGAIEILVERML--------------------------DNQI 89
V NDTKVMKARL G++ +GG IE+L+ER++ + I
Sbjct 87 VFNDTKVMKARLFGQKDTGGKIEVLIERLVALSDLNSADLDTITSNSDIIDMTVIAEKHI 146
Query 90 AHCHIKASNTPKAGAELFVGENGIKVTVQGRHENLFVVEFSEPILSVLDRYGQLPIPPYF 149
A CH+KAS K G L + + + + GR ENLF++ F PIL L+ YG+LPIPPYF
Sbjct 147 ALCHVKASKALKLGQGLVLADGHMTGVMIGRQENLFILAFDTPILPDLELYGELPIPPYF 206
Query 150 NREAEEIDTERYQTVFHDPQKIASVAAPTASLHFDQDLLEKLAAKNIQKTFVTLHVGAGT 209
R A+ D RYQTVFHDP K+ASVAAPTASLHFD +LEKLAAK IQ FVTLHVGAGT
Sbjct 207 ERHADATDNTRYQTVFHDPAKLASVAAPTASLHFDDIVLEKLAAKGIQTAFVTLHVGAGT 266
Query 210 FMPVRTDDIKNHIMHSEWCDVPESTAELIRQTKARGNKVIAVGTTATRALESAAQ---AN 266
F PV+T+++ NH MHSE+ +P++TA+LI QT A G +VIA+GTT TR LE+A Q +
Sbjct 267 FAPVKTENLLNHTMHSEYAHLPQATADLINQTHANGKQVIAIGTTVTRVLETAYQQTAVD 326
Query 267 GGKIDAWTGDTQIFIYPGYQFCVVDRLITNFHLPESTLLMLVSALSNRNNILSAYEHAVQ 326
+ W GDT+IFIYPG++F VVD+L+TNFHLP+STLLMLVSA + + +I AY+HA++
Sbjct 327 RQPLSGWAGDTEIFIYPGFEFGVVDKLLTNFHLPKSTLLMLVSAFATKKSIEEAYQHAIE 386
Query 327 SKYRFFSYGDAMLIDQAV 344
S+YRFFSYGDAML+D+ V
Sbjct 387 SEYRFFSYGDAMLLDKKV 404
>A1S7P3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)]
Length=345
Score = 383 bits (983), Expect = 1e-136
Identities = 190/343 (55%), Positives = 254/343 (74%), Gaps = 6/343 (2%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAH-GHYHDHAFTDILDLINDGDLLVLND 59
M+++DF FDLPDELIARYP+ R+ASRLLHLD G D FTDIL LI GDL++ N+
Sbjct 1 MRVADFTFDLPDELIARYPMAERTASRLLHLDGSTGALADRQFTDILALIEPGDLMIFNN 60
Query 60 TKVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQG 119
T+V+ ARL G++ASGG +EILVERMLD++ H+++S +PK GAE+ + + G K+T+
Sbjct 61 TRVIPARLFGQKASGGKLEILVERMLDDKRILAHVRSSKSPKPGAEIIL-DGGFKMTMDA 119
Query 120 RHENLFVVEFSEP--ILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAAP 177
RH+ LF + + IL VL+ G +P+PPY +R E+ D ERYQTV+++ + +VAAP
Sbjct 120 RHDALFELSLKDDKTILEVLEAVGHMPLPPYIDRPDEDTDKERYQTVYNE--RPGAVAAP 177
Query 178 TASLHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAEL 237
TA LHFD+ +L L AK + FVTLHVGAGTF PVR D++ H MHSEW +VP E
Sbjct 178 TAGLHFDESILAALKAKGVDMAFVTLHVGAGTFQPVRVDNVLEHKMHSEWAEVPADVVEK 237
Query 238 IRQTKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLITNF 297
IR TKA G +VIAVGTT+ R+LESAA+A+ G+++ + GDT IFI+PG++F VVD ++TNF
Sbjct 238 IRATKAAGKRVIAVGTTSVRSLESAAKASEGELEPFCGDTDIFIFPGFEFKVVDAMVTNF 297
Query 298 HLPESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLI 340
HLPESTL+MLVSA + + ++ AY HAV+ KYRFFSYGDAM +
Sbjct 298 HLPESTLIMLVSAFAGFDEVIGAYRHAVEQKYRFFSYGDAMFV 340
>Q8ECM2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shewanella oneidensis (strain MR-1)]
Length=345
Score = 380 bits (975), Expect = 2e-135
Identities = 188/343 (55%), Positives = 259/343 (76%), Gaps = 6/343 (2%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAH-GHYHDHAFTDILDLINDGDLLVLND 59
M+++DF+FDLPDELIARYP+ R+ASRLL LD + G D FTD+L +IN GDL+V N+
Sbjct 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGTLVDKQFTDLLGMINPGDLMVFNN 60
Query 60 TKVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQG 119
T+V+ ARL G++ASGG +EILVERMLD++ H+++S +PK + + + + G ++ +
Sbjct 61 TRVIPARLFGQKASGGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHL-DGGYEMKMMA 119
Query 120 RHENLFVVEFSEP--ILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAAP 177
RH+ LF ++ IL VL+ G +P+PPY +R E+ D ERYQTV++ Q +VAAP
Sbjct 120 RHDALFELQLLSELSILEVLEAVGHMPLPPYIDRPDEDADKERYQTVYN--QNPGAVAAP 177
Query 178 TASLHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAEL 237
TA LHFD +LE L AK + FVTLHVGAGTF PVR D++ H MHSEW +VP+ +L
Sbjct 178 TAGLHFDDAMLEALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKMHSEWANVPQDVVDL 237
Query 238 IRQTKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLITNF 297
I +TKA GN+V+AVGTT+ R+LESAA+A+ G+++A++GDT IFIYPGYQF VVD ++TNF
Sbjct 238 IARTKAAGNRVVAVGTTSVRSLESAARASAGQLNAFSGDTDIFIYPGYQFQVVDAMVTNF 297
Query 298 HLPESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLI 340
HLPESTL+MLVSA + ++++AY+HA++ KYRFFSYGDAM +
Sbjct 298 HLPESTLIMLVSAFAGYEHVMAAYQHAIKQKYRFFSYGDAMFV 340
>P0A7F9 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Escherichia coli (strain K12)]
Length=356
Score = 371 bits (952), Expect = 1e-131
Identities = 193/345 (56%), Positives = 253/345 (73%), Gaps = 7/345 (2%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHGHYHDHA-FTDILDLINDGDLLVLND 59
M+++DF+F+LP+ LIA YP+ RS+ RLL LD H FTD+LD +N GDLLV N+
Sbjct 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNN 60
Query 60 TKVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGEN-GIKVTVQ 118
T+V+ ARL G++ASGG IE+LVERMLD++ HI+AS PK GAEL +G++ I T+
Sbjct 61 TRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMT 120
Query 119 GRHENLFVVEFSEP--ILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAA 176
RH LF VEF++ +L +L+ G +P+PPY +R E+ D E YQTV+ + K +VAA
Sbjct 121 ARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSE--KPGAVAA 178
Query 177 PTASLHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAE 236
PTA LHFD+ LLEKL AK ++ FVTLHVGAGTF PVR D I++HIMHSE+ +VP+ +
Sbjct 179 PTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVD 238
Query 237 LIRQTKARGNKVIAVGTTATRALESAAQ-ANGGKIDAWTGDTQIFIYPGYQFCVVDRLIT 295
+ KARGN+VIAVGTT+ R+LESAAQ A I+ + DTQIFIYPG+Q+ VVD L+T
Sbjct 239 AVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVT 298
Query 296 NFHLPESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLI 340
NFHLPESTL+MLVSA + + ++AY+ AV+ KYRFFSYGDAM I
Sbjct 299 NFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 343
>A8AYK5 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC
15272 / CH1 / DL1 / V288)]
Length=342
Score = 278 bits (710), Expect = 3e-95
Identities = 152/345 (44%), Positives = 221/345 (64%), Gaps = 9/345 (3%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLD-AHGHYHDHAFTDILDLINDGDLLVLND 59
M +DF+F LP+ELIA+ PL+ R ASRLL +D + G + D F I+D + GD LV+N+
Sbjct 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVDRSSGEFSDQHFDSIIDQLQPGDALVMNN 60
Query 60 TKVMKARLKGKR-ASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQ 118
T+V+ ARL G++ +GG +E+L+ + + K + K GA++ G+ + TV
Sbjct 61 TRVLPARLYGEKPGTGGHVELLLLKNTEGDQWEVLAKPAKRLKVGAQVSFGDGRLTATVV 120
Query 119 GRHEN---LFVVEFSEPILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVA 175
E+ + ++ L VL+ G++P+PPY + + D ERYQTV+ ++ S A
Sbjct 121 DELEHGGRIVRFDYQGIFLEVLESLGEMPLPPYIHEKLA--DRERYQTVY--AKENGSAA 176
Query 176 APTASLHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTA 235
APTA LHF ++LL ++ AK ++ ++TLHVG GTF PV D++ +H MHSE+ + E A
Sbjct 177 APTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNLDDHEMHSEFYTLSEEAA 236
Query 236 ELIRQTKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLIT 295
+R+ KA G++VIAVGTT+ R LE+ G I A +G T IFI PGYQ+ +VD T
Sbjct 237 ATLREVKANGHRVIAVGTTSIRTLETIGNKFKGDIQADSGWTNIFIKPGYQWQIVDAFST 296
Query 296 NFHLPESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLI 340
NFHLP+STL+MLVSA + R+ L AYEHA+ +YRFFS+GDAM I
Sbjct 297 NFHLPKSTLVMLVSAFAGRDLTLKAYEHAIAERYRFFSFGDAMFI 341
>Q9WZ44 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099
/ NBRC 100826 / MSB8)]
Length=335
Score = 272 bits (695), Expect = 4e-93
Identities = 144/341 (42%), Positives = 218/341 (64%), Gaps = 8/341 (2%)
Query 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLDAHGHYHDHA-FTDILDLINDGDLLVLND 59
M++S+F+++LP ELIA+ P++ R ASRL+ L +H F +I++ + GDLLVLN
Sbjct 1 MKVSEFDYELPPELIAQEPVEPRDASRLMVLHRKTQRIEHRIFREIIEYLEPGDLLVLNV 60
Query 60 TKVMKARLKGKRASGGAIEILVERMLDNQIAHCHIKASNTPKAGAELFVGENGIKVTVQG 119
+KV+ ARL ++ +G +IEIL+ L+ I C ++ K G EL + E+ V +
Sbjct 61 SKVIPARLYARKKTGASIEILLIERLEEGIWKCLVRPGQKVKKGTELVIDEDLSAVCLGR 120
Query 120 RHENLFVVEFSEPILSVLDRYGQLPIPPYFNREAEEIDTERYQTVFHDPQKIASVAAPTA 179
+ +++F ++ G+ P+PPY E + ERYQTV+ + SVAAPTA
Sbjct 121 GEDGTRILKFQPQDDRLIFEKGRTPLPPYIKNE---VPLERYQTVYAKEE--GSVAAPTA 175
Query 180 SLHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNHIMHSEWCDVPESTAELIR 239
LHF +L+EKL K +Q V LHVG GTF PV+ ++++ H MH E+ VP+ T +R
Sbjct 176 GLHFTPELIEKLKKKGVQFAEVVLHVGIGTFRPVKVEEVEKHKMHEEFYQVPKETVRKLR 235
Query 240 QTKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFIYPGYQFCVVDRLITNFHL 299
+T+ RGN+++AVGTT R LE+ A+ + + + G T +FIYP ++F +VD L+TNFHL
Sbjct 236 ETRERGNRIVAVGTTTVRTLETIARL--PEQEEYVGKTDLFIYPPFEFKLVDALVTNFHL 293
Query 300 PESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLI 340
P STLLMLV+A + ++ ++ AY AV+ +YRFFS+GDAMLI
Sbjct 294 PRSTLLMLVAAFAGKDFVMEAYREAVKRRYRFFSFGDAMLI 334
Lambda K H a alpha
0.322 0.137 0.402 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1381528
Database: 4f224020bef5fdc8d2f4d370884b60bb.SwissProt.fasta
Posted date: Jun 1, 2024 2:16 AM
Number of letters in database: 5,341
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
