BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 2ce22000b33d186f2714e4c01fc93494.SwissProt.fasta
14 sequences; 5,191 total letters
Query= ACIAD0600
Length=252
Score E
Sequences producing significant alignments: (Bits) Value
P94361 Putative polysaccharide deacetylase YxkH [Bacillus subtili... 82.4 6e-22
Q5HKP8 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphy... 64.3 2e-15
Q6TYB1 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphy... 64.3 2e-15
Q6G606 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphy... 62.0 1e-14
Q6GDD6 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphy... 62.0 1e-14
Q7A349 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphy... 62.0 1e-14
Q99QX2 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphy... 62.0 1e-14
Q9RQP7 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphy... 62.0 1e-14
Q5HCM9 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphy... 62.0 1e-14
P31666 Uncharacterized protein YadE [Escherichia coli (strain K12)] 54.7 5e-12
Q5AQQ0 Chitin deacetylase [Emericella nidulans (strain FGSC A4 / ... 47.4 8e-10
P83513 Endo-1,4-beta-xylanase 11A / Acetylated xylan deacetylase ... 40.4 3e-07
P75906 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Escher... 36.2 7e-06
Q8XAR3 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Escher... 35.8 9e-06
>P94361 Putative polysaccharide deacetylase YxkH [Bacillus subtilis
(strain 168)]
Length=279
Score = 82.4 bits (202), Expect = 6e-22
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 17/195 (9%)
Query 27 WLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKFEQLL--------QLLVKKNAVFCFVS 78
W+ A I+M H ++ + + +P +FE + Q L K A
Sbjct 56 WIKTEKPAKLPILMYHSIS---SGNSLRVPKKEFEAHMKWLHDNGYQTLTPKEASLMLTQ 112
Query 79 ELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLATQIEGIE-ALTVDQVQE 137
+ + + V ++FDDG+ DNY A+P+LKKY KATI++ + G + LT +Q++E
Sbjct 113 DK---KPSEKCVLITFDDGYTDNYQDAYPVLKKYGMKATIFMIGKSIGHKHHLTEEQMKE 169
Query 138 MARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVGACPS-FAYPFGRFNEKH 196
MA+ G I +HT H+ L L + EM SK+ + + + +YP GR+NE+
Sbjct 170 MAQHG-ISIESHTIDHLELNGLTPQQQQSEMADSKKLFDNMFHQQTTIISYPVGRYNEET 228
Query 197 QQMARKIGFKNAVST 211
+ A K G++ V+T
Sbjct 229 LKAAEKTGYQMGVTT 243
>Q5HKP8 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphylococcus
epidermidis (strain ATCC 35984 / RP62A)]
Length=289
Score = 64.3 bits (155), Expect = 2e-15
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 26/203 (13%)
Query 49 EASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQYREQ----KNVVALSFDDGFMDNYVY 104
E ++ +F+ +Q L +A F + E +Y+E+ K V ++FDD MD +Y
Sbjct 70 EIKNYSVTDQEFKSQIQWLKAHDAKFLTLKEFIKYKEKGKFPKRSVWINFDD--MDQTIY 127
Query 105 --AFPLLKKYQAKATIYL------ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNL 156
AFP+LKKY AT +L +T + L+ Q+ EM +G +F +HT H ++
Sbjct 128 DNAFPVLKKYHIPATGFLITNHIGSTNFHNLNLLSKKQLDEMYETGLWDFESHT-HDLHA 186
Query 157 LKLDDETAYQEMLHS------KQDVETLVGACP----SFAYPFGRFNEKHQQMARKIGFK 206
LK +++ + + S K+ L P + AYP+G N+ + +K G +
Sbjct 187 LKKGNKSKFLDSSQSVASKDIKKSEHYLNKNYPKNERALAYPYGLINDDKIKAMKKNGIQ 246
Query 207 NAVSTRKKIEPYDPEHPFNIPRV 229
+ ++K D ++ + IPR+
Sbjct 247 YGFTLQEKAVTPDADN-YRIPRI 268
>Q6TYB1 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphylococcus
epidermidis]
Length=289
Score = 64.3 bits (155), Expect = 2e-15
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 26/203 (13%)
Query 49 EASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQYREQ----KNVVALSFDDGFMDNYVY 104
E ++ +F+ +Q L +A F + E +Y+E+ K V ++FDD MD +Y
Sbjct 70 EIKNYSVTDQEFKSQIQWLKAHDAKFLTLKEFIKYKEKGKFPKRSVWINFDD--MDQTIY 127
Query 105 --AFPLLKKYQAKATIYL------ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNL 156
AFP+LKKY AT +L +T + L+ Q+ EM +G +F +HT H ++
Sbjct 128 DNAFPVLKKYHIPATGFLITNHIGSTNFHNLNLLSKKQLDEMYETGLWDFESHT-HDLHA 186
Query 157 LKLDDETAYQEMLHS------KQDVETLVGACP----SFAYPFGRFNEKHQQMARKIGFK 206
LK +++ + + S K+ L P + AYP+G N+ + +K G +
Sbjct 187 LKKGNKSKFLDSSQSVASKDIKKSEHYLNKNYPKNERALAYPYGLINDDKIKAMKKNGIQ 246
Query 207 NAVSTRKKIEPYDPEHPFNIPRV 229
+ ++K D ++ + IPR+
Sbjct 247 YGFTLQEKAVTPDADN-YRIPRI 268
>Q6G606 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphylococcus
aureus (strain MSSA476)]
Length=290
Score = 62.0 bits (149), Expect = 1e-14
Identities = 52/203 (26%), Positives = 99/203 (49%), Gaps = 26/203 (13%)
Query 49 EASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQYREQ----KNVVALSFDDGFMDNYVY 104
E ++ +FE ++ L +A F + E Y+++ K V ++FDD MD +Y
Sbjct 71 EIKNYSVSQSQFESQIKWLKSHDAKFLTLKEFLYYKKKGKFPKRSVWINFDD--MDETIY 128
Query 105 --AFPLLKKYQAKATIYLAT------QIEGIEALTVDQVQEMARSGFIEFGAHTQ--HHV 154
A+P+LKKY+ AT ++ T ++ ++ +++EM ++G EF HT H++
Sbjct 129 ENAYPILKKYKIPATGFIITGHVGEENFHNLDMISKKELKEMYKTGLWEFETHTHDLHNL 188
Query 155 N------LLKLDDETAYQEMLHS-KQDVETLVGACPSFAYPFGRFNEKHQQMARKIGFKN 207
+ L+K + T +++ S K + + + AYP+G N+ + +K G K
Sbjct 189 SKNNKSKLMKASEATIIKDLNKSEKYLTKNFKKSQKTIAYPYGLMNDDKLPVIKKAGLKY 248
Query 208 AVSTRKK-IEPYDPEHPFNIPRV 229
S +K + P + + IPR+
Sbjct 249 GFSLEEKAVTP--NSNDYYIPRI 269
Score = 17.3 bits (33), Expect = 6.1
Identities = 5/14 (36%), Positives = 10/14 (71%), Gaps = 0/14 (0%)
Query 98 FMDNYVYAFPLLKK 111
F++N++Y F K+
Sbjct 58 FLNNFIYFFSSSKE 71
>Q6GDD6 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphylococcus
aureus (strain MRSA252)]
Length=290
Score = 62.0 bits (149), Expect = 1e-14
Identities = 52/203 (26%), Positives = 96/203 (47%), Gaps = 26/203 (13%)
Query 49 EASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQYREQ----KNVVALSFDDGFMDNYVY 104
E ++ +FE ++ L +A F + E Y+++ K V ++FDD MD +Y
Sbjct 71 EIKNYSVSQSQFESQIKWLKSHDAKFLTLKEFLYYKKKGKFPKRSVWINFDD--MDETIY 128
Query 105 --AFPLLKKYQAKATIYLAT------QIEGIEALTVDQVQEMARSGFIEFGAHTQHHVN- 155
A+P+LKKY+ AT ++ T ++ ++ +++EM ++G EF HT N
Sbjct 129 ENAYPILKKYKIPATGFIITGHVGEENFHNLDMISKKELKEMYKTGLWEFETHTHDMHNL 188
Query 156 -------LLKLDDETAYQEMLHS-KQDVETLVGACPSFAYPFGRFNEKHQQMARKIGFKN 207
L+K + T +++ S K + + + AYP+G N+ + +K G K
Sbjct 189 SKNNKSKLMKASEATIIKDLNKSEKYLTKNFKKSQKTIAYPYGLMNDDKLPVIKKAGLKY 248
Query 208 AVSTRKK-IEPYDPEHPFNIPRV 229
S +K + P + + IPR+
Sbjct 249 GFSLEEKAVTP--NSNDYYIPRI 269
Score = 17.3 bits (33), Expect = 6.1
Identities = 5/14 (36%), Positives = 10/14 (71%), Gaps = 0/14 (0%)
Query 98 FMDNYVYAFPLLKK 111
F++N++Y F K+
Sbjct 58 FLNNFIYFFSSSKE 71
>Q7A349 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphylococcus
aureus (strain N315)]
Length=290
Score = 62.0 bits (149), Expect = 1e-14
Identities = 52/203 (26%), Positives = 99/203 (49%), Gaps = 26/203 (13%)
Query 49 EASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQYREQ----KNVVALSFDDGFMDNYVY 104
E ++ +FE ++ L +A F + E Y+++ K V ++FDD MD +Y
Sbjct 71 EIKNYSVSQSQFESQIKWLKSHDAKFLTLKEFLYYKKKGKFPKRSVWINFDD--MDETIY 128
Query 105 --AFPLLKKYQAKATIYLAT------QIEGIEALTVDQVQEMARSGFIEFGAHTQ--HHV 154
A+P+LKKY+ AT ++ T ++ ++ +++EM ++G EF HT H++
Sbjct 129 ENAYPILKKYKIPATGFIITGHVGEENFHNLDMISKKELKEMYKTGLWEFETHTHDLHNL 188
Query 155 N------LLKLDDETAYQEMLHS-KQDVETLVGACPSFAYPFGRFNEKHQQMARKIGFKN 207
+ L+K + T +++ S K + + + AYP+G N+ + +K G K
Sbjct 189 SKNNKSKLMKASEATIIKDLNKSEKYLTKNFKKSQKTIAYPYGLMNDDKLPVIKKAGLKY 248
Query 208 AVSTRKK-IEPYDPEHPFNIPRV 229
S +K + P + + IPR+
Sbjct 249 GFSLEEKAVTP--NSNDYYIPRI 269
Score = 17.3 bits (33), Expect = 6.1
Identities = 5/14 (36%), Positives = 10/14 (71%), Gaps = 0/14 (0%)
Query 98 FMDNYVYAFPLLKK 111
F++N++Y F K+
Sbjct 58 FLNNFIYFFSSSKE 71
>Q99QX2 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphylococcus
aureus (strain Mu50 / ATCC 700699)]
Length=290
Score = 62.0 bits (149), Expect = 1e-14
Identities = 52/203 (26%), Positives = 99/203 (49%), Gaps = 26/203 (13%)
Query 49 EASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQYREQ----KNVVALSFDDGFMDNYVY 104
E ++ +FE ++ L +A F + E Y+++ K V ++FDD MD +Y
Sbjct 71 EIKNYSVSQSQFESQIKWLKSHDAKFLTLKEFLYYKKKGKFPKRSVWINFDD--MDETIY 128
Query 105 --AFPLLKKYQAKATIYLAT------QIEGIEALTVDQVQEMARSGFIEFGAHTQ--HHV 154
A+P+LKKY+ AT ++ T ++ ++ +++EM ++G EF HT H++
Sbjct 129 ENAYPILKKYKIPATGFIITGHVGEENFHNLDMISKKELKEMYKTGLWEFETHTHDLHNL 188
Query 155 N------LLKLDDETAYQEMLHS-KQDVETLVGACPSFAYPFGRFNEKHQQMARKIGFKN 207
+ L+K + T +++ S K + + + AYP+G N+ + +K G K
Sbjct 189 SKNNKSKLMKASEATIIKDLNKSEKYLTKNFKKSQKTIAYPYGLMNDDKLPVIKKAGLKY 248
Query 208 AVSTRKK-IEPYDPEHPFNIPRV 229
S +K + P + + IPR+
Sbjct 249 GFSLEEKAVTP--NSNDYYIPRI 269
Score = 17.3 bits (33), Expect = 6.1
Identities = 5/14 (36%), Positives = 10/14 (71%), Gaps = 0/14 (0%)
Query 98 FMDNYVYAFPLLKK 111
F++N++Y F K+
Sbjct 58 FLNNFIYFFSSSKE 71
>Q9RQP7 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphylococcus
aureus (strain NCTC 8325 / PS 47)]
Length=290
Score = 62.0 bits (149), Expect = 1e-14
Identities = 52/203 (26%), Positives = 99/203 (49%), Gaps = 26/203 (13%)
Query 49 EASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQYREQ----KNVVALSFDDGFMDNYVY 104
E ++ +FE ++ L +A F + E Y+++ K V ++FDD MD +Y
Sbjct 71 EIKNYSVSQSQFESQIKWLKSHDAKFLTLKEFLYYKKKGKFPKRSVWINFDD--MDETIY 128
Query 105 --AFPLLKKYQAKATIYLAT------QIEGIEALTVDQVQEMARSGFIEFGAHTQ--HHV 154
A+P+LKKY+ AT ++ T ++ ++ +++EM ++G EF HT H++
Sbjct 129 ENAYPILKKYKIPATGFIITGHVGEENFHNLDMISKKELKEMYKTGLWEFETHTHDLHNL 188
Query 155 N------LLKLDDETAYQEMLHS-KQDVETLVGACPSFAYPFGRFNEKHQQMARKIGFKN 207
+ L+K + T +++ S K + + + AYP+G N+ + +K G K
Sbjct 189 SKNNKSKLMKASEATIIKDLNKSEKYLTKNFKKSQKTIAYPYGLMNDDKLPVIKKAGLKY 248
Query 208 AVSTRKK-IEPYDPEHPFNIPRV 229
S +K + P + + IPR+
Sbjct 249 GFSLEEKAVTP--NSNDYYIPRI 269
Score = 17.3 bits (33), Expect = 6.1
Identities = 5/14 (36%), Positives = 10/14 (71%), Gaps = 0/14 (0%)
Query 98 FMDNYVYAFPLLKK 111
F++N++Y F K+
Sbjct 58 FLNNFIYFFSSSKE 71
>Q5HCM9 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphylococcus
aureus (strain COL)]
Length=292
Score = 62.0 bits (149), Expect = 1e-14
Identities = 52/203 (26%), Positives = 99/203 (49%), Gaps = 26/203 (13%)
Query 49 EASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQYREQ----KNVVALSFDDGFMDNYVY 104
E ++ +FE ++ L +A F + E Y+++ K V ++FDD MD +Y
Sbjct 71 EIKNYSVSQSQFESQIKWLKSHDAKFLTLKEFLYYKKKGKFPKRSVWINFDD--MDETIY 128
Query 105 --AFPLLKKYQAKATIYLAT------QIEGIEALTVDQVQEMARSGFIEFGAHTQ--HHV 154
A+P+LKKY+ AT ++ T ++ ++ +++EM ++G EF HT H++
Sbjct 129 ENAYPILKKYKIPATGFIITGHVGEENFHNLDMISKKELKEMYKTGLWEFETHTHDLHNL 188
Query 155 N------LLKLDDETAYQEMLHS-KQDVETLVGACPSFAYPFGRFNEKHQQMARKIGFKN 207
+ L+K + T +++ S K + + + AYP+G N+ + +K G K
Sbjct 189 SKNNKSKLMKASEATIIKDLNKSEKYLTKNFKKSQKTIAYPYGLMNDDKLPVIKKAGLKY 248
Query 208 AVSTRKK-IEPYDPEHPFNIPRV 229
S +K + P + + IPR+
Sbjct 249 GFSLEEKAVTP--NSNDYYIPRI 269
Score = 17.3 bits (33), Expect = 6.1
Identities = 5/14 (36%), Positives = 10/14 (71%), Gaps = 0/14 (0%)
Query 98 FMDNYVYAFPLLKK 111
F++N++Y F K+
Sbjct 58 FLNNFIYFFSSSKE 71
>P31666 Uncharacterized protein YadE [Escherichia coli (strain
K12)]
Length=409
Score = 54.7 bits (130), Expect = 5e-12
Identities = 43/163 (26%), Positives = 73/163 (45%), Gaps = 22/163 (13%)
Query 79 ELEQYREQK-----NVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLAT----------Q 123
+LE Y + K V ++FDDG YA+P+LK+Y KAT ++ T
Sbjct 218 QLEGYVKNKINLPARAVVITFDDGLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKWN 277
Query 124 IEGIEALTVDQVQEMARSGFIEFGAHTQHHVN------LLKLDDETAYQEMLHSKQDVET 177
+ ++ ++V ++ E+ + H H V+ LL + + S++ +
Sbjct 278 PKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRSEHNILFDFARSRRALAQ 337
Query 178 LVGACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRK-KIEPYD 219
+YPFG FN+ + A GF AV+T K K++P D
Sbjct 338 FNPHVWYLSYPFGGFNDNAVKAANDAGFHLAVTTMKGKVKPGD 380
>Q5AQQ0 Chitin deacetylase [Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139)]
Length=237
Score = 47.4 bits (111), Expect = 8e-10
Identities = 33/120 (28%), Positives = 57/120 (48%), Gaps = 5/120 (4%)
Query 88 NVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLATQIEGIEALTVDQVQEMARSGFIEFG 147
N +AL+FDDG + LL +Y A+AT ++ + A +Q M G + G
Sbjct 40 NTIALTFDDGPSEYTPQLLDLLSRYSARATFFV---LGDAAAQNPGLLQRMRDEGH-QVG 95
Query 148 AHTQHHVNLLKLDDETAYQEMLHSKQDVETLVGACPSFAY-PFGRFNEKHQQMARKIGFK 206
AHT HV+L L + +M ++ + +G P++ P+ NE Q+ R + ++
Sbjct 96 AHTYDHVSLPSLGYDGIASQMTRLEEVIRPALGVAPAYMRPPYLETNELVLQVMRDLDYR 155
>P83513 Endo-1,4-beta-xylanase 11A / Acetylated xylan deacetylase
[Pseudobutyrivibrio xylanivorans]
Length=602
Score = 40.4 bits (93), Expect = 3e-07
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 3/104 (3%)
Query 85 EQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLATQIEGIEALTVDQVQEMARSGFI 144
+ + ++AL+FDDG +L+KY KAT +L Q + + T VQ + G
Sbjct 399 QNQKLIALTFDDGPSSTTSQVLDMLEKYNVKATFFLIGQ--NVNSNTASIVQRQVKMG-C 455
Query 145 EFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVGACPSFAYP 188
E H+ H ++ K++ ++ + ++ G F P
Sbjct 456 ELACHSYTHEDMTKMNASQIRNQIDWTASAIKNTAGVDVKFFRP 499
>P75906 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Escherichia
coli (strain K12)]
Length=672
Score = 36.2 bits (82), Expect = 7e-06
Identities = 40/168 (24%), Positives = 65/168 (39%), Gaps = 54/168 (32%)
Query 87 KNVVALSFDDGFMDNYVYAFPLLKKYQ-----AKATIYLATQIE-----GIEAL------ 130
+ V L+FDDG+ Y FP+L+ +Q A ++ T + G E +
Sbjct 106 EKAVVLTFDDGYQSFYTRVFPILQAFQWPAVWAPVGSWVDTPADKQVKFGDELVDREYFA 165
Query 131 TVDQVQEMARSGFIEFGAHTQH----------------HVNLLKLDDETAYQ-------- 166
T QV+E+ARS +E +HT + +VN D Y+
Sbjct 166 TWQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRER 225
Query 167 ---------EMLHSKQDVETLVGACPSFAYPFGRFNEKHQQMARKIGF 205
E L +K +V V F +P+G N + +K+G+
Sbjct 226 IRLDAVKMTEYLRTKVEVNPHV-----FVWPYGEANGIAIEELKKLGY 268
>Q8XAR3 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Escherichia
coli O157:H7]
Length=672
Score = 35.8 bits (81), Expect = 9e-06
Identities = 36/163 (22%), Positives = 61/163 (37%), Gaps = 44/163 (27%)
Query 87 KNVVALSFDDGFMDNYVYAFPLLKKYQ---------------AKATIYLATQIEGIEAL- 130
+ V L+FDDG+ Y FP+L+ +Q A + ++ E
Sbjct 106 EKAVVLTFDDGYQSFYTRVFPILQAFQWPAVWAPVGSWVDTPADKQVKFGDELVDREYFA 165
Query 131 TVDQVQEMARSGFIEFGAHTQH----------------HVNLLKLDDETAYQEMLHSKQD 174
T QV+E+ARS +E +HT + +VN D Y+ ++
Sbjct 166 TWQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRER 225
Query 175 VE-----------TLVGACPS-FAYPFGRFNEKHQQMARKIGF 205
+ T V P F +P+G N + +K+G+
Sbjct 226 IRLDAVKMTEYLRTKVEVNPHVFIWPYGEANGIAIEELKKLGY 268
Lambda K H a alpha
0.326 0.139 0.417 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 944127
Database: 2ce22000b33d186f2714e4c01fc93494.SwissProt.fasta
Posted date: May 9, 2024 3:00 PM
Number of letters in database: 5,191
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
