BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 1a0c182b37361c1609554f5b351383a5.SwissProt.fasta
13 sequences; 4,043 total letters
Query= ACIAD0601
Length=256
Score E
Sequences producing significant alignments: (Bits) Value
Q9R9M9 Lipopolysaccharide core biosynthesis glycosyltransferase L... 157 1e-50
Q1RJ60 Uncharacterized glycosyltransferase RBE_0523 [Rickettsia b... 122 8e-37
Q4UMM0 Uncharacterized glycosyltransferase RF_0337 [Rickettsia fe... 121 2e-36
Q92IX8 Uncharacterized glycosyltransferase RC0292 [Rickettsia con... 118 2e-35
Q68XF1 Uncharacterized glycosyltransferase RT0209 [Rickettsia typ... 117 6e-35
O05944 Uncharacterized glycosyltransferase RP128 [Rickettsia prow... 114 8e-34
P44029 Uncharacterized glycosyltransferase HI_0653 [Haemophilus i... 99.4 2e-28
Q9XC90 Lipopolysaccharide core biosynthesis glycosyltransferase W... 97.1 1e-27
Q54435 Lipopolysaccharide core biosynthesis glycosyltransferase K... 89.0 1e-24
O64036 Glycosyltransferase SunS [Bacillus phage SPbeta] 57.8 4e-13
O31986 SPbeta prophage-derived glycosyltransferase SunS [Bacillus... 57.8 4e-13
P42460 TPR repeat-containing protein Synpcc7942_0270 [Synechococc... 48.5 5e-10
P26403 O antigen biosynthesis rhamnosyltransferase RfbN [Salmonel... 35.4 8e-06
>Q9R9M9 Lipopolysaccharide core biosynthesis glycosyltransferase
LpsC [Rhizobium meliloti (strain 1021)]
Length=270
Score = 157 bits (397), Expect = 1e-50
Identities = 85/255 (33%), Positives = 144/255 (56%), Gaps = 7/255 (3%)
Query 1 MIPKIACSVYIVTLNCEAWLFKTLQSVQDFDEVIILDSGSIDATYAIAQQFDN----VHI 56
MIPK+ S +I+ LN EA+L K ++S++ E++I+DSGS D T A+ Q + + +
Sbjct 1 MIPKLPLSAFIICLNEEAYLGKCIESLERCAEIVIVDSGSTDGTAALVQSYIDAGWPIRF 60
Query 57 EHQDWQGYAGQKSLALAKCRNDWVLNLDGDEVLSEGLKQEIAEVIQ-HNQLDALITPIND 115
++ W+GYAGQK AL +C W N+D DE L + L++ + E++ +++
Sbjct 61 MYEPWRGYAGQKQFALEQCSQPWCFNIDADERLDKALRELLPELLAASDEIVGWRVARRP 120
Query 116 VFLGVPNS-KHTKKHAKVRFFRKAKGQYDLANKVHENVIVEGESRRA-VHDIYHFGESSI 173
+G + ++ ++ +R R+ KG+YDL+ KVHE ++ EG A + HF +
Sbjct 121 YLIGYGYTPENVRERRNLRLIRRGKGRYDLSQKVHEGIVPEGNVGNARTGSLLHFRPLVM 180
Query 174 FVKVEKNNQYSNLKAAEKFQKGKTPSLAKLVLVMPMTFIKSYFIRRSCFNGWRGFVNSMI 233
++ K N+YS LKA ++ + GK P KL+ P+ F++ YF G GF+ +M
Sbjct 181 DEQILKENKYSTLKADQQVESGKRPRFYKLIFTPPIYFLRLYFRNGLWRCGLSGFIEAMT 240
Query 234 NAFYAFLKEAKLFEQ 248
A YAFL AK++++
Sbjct 241 GAVYAFLTAAKIYQR 255
>Q1RJ60 Uncharacterized glycosyltransferase RBE_0523 [Rickettsia
bellii (strain RML369-C)]
Length=294
Score = 122 bits (306), Expect = 8e-37
Identities = 90/260 (35%), Positives = 137/260 (53%), Gaps = 22/260 (8%)
Query 8 SVYIVTLNCEAWLFKTLQSVQDF-DEVIILDSGSIDATYAIAQQFDNVHIEHQDWQGYAG 66
S +I+T N A + + + SV++ DEVI++DS S D T IA+ + + W GY G
Sbjct 10 SAFIITKNEAARIERAINSVKNIADEVIVVDSESTDKTVIIAESL-GAKVVVKPWLGYVG 68
Query 67 QKSLALAKCRNDWVLNLDGDEVLSEGLKQEIAEVIQHN--------QLDALITPINDVF- 117
QKS A C+NDW+LN+D DE LS+ L+ EI + Q+ LI ND
Sbjct 69 QKSFAETICKNDWILNIDADEELSKELQDEIEYIFASQNQDRYLAYQIKLLIMHRNDTRP 128
Query 118 -LGVPNSKHTKKHAKVRFFRKAKGQYDLANKVHENVIVEGESRRA--VHDI----YHFGE 170
+ P +K T+ + K + A + + H++V+ + A ++ + YH+
Sbjct 129 RIFAPYNKCTRLYNK----KFASFANTINSTTHDSVVFNKDVDFANKIYTLNEAAYHYSG 184
Query 171 SSIFVKVEKNNQYSNLKAAEKFQKGKTPSLAKLVLVMPMTFIKSYFIRRSCFNGWRGFVN 230
+SI V K N YS +A + ++GK PS ++ M F K++FIRR G+ GFV+
Sbjct 185 TSIEQLVAKANFYSGEQAKDLIKQGKKPSNIRIATEMIWWFFKAFFIRRYFVFGFDGFVD 244
Query 231 SMINAFYAFLKEAKLFEQSM 250
SMI AF FL+ AKL E S+
Sbjct 245 SMIFAFARFLRLAKLRELSL 264
>Q4UMM0 Uncharacterized glycosyltransferase RF_0337 [Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2)]
Length=283
Score = 121 bits (303), Expect = 2e-36
Identities = 95/264 (36%), Positives = 140/264 (53%), Gaps = 23/264 (9%)
Query 8 SVYIVTLNCEAWLFKTLQSVQDF-DEVIILDSGSIDATYAIAQQFDNVHIEHQDWQGYAG 66
S +I+T N A + + + SV++ DEVI++DS S D T AIA+Q + + W GY G
Sbjct 5 SAFIITKNEAARIARAINSVKNIVDEVIVVDSESTDDTVAIAEQL-GAKVIVKPWLGYVG 63
Query 67 QKSLALAKCRNDWVLNLDGDEVLSEGLKQEIAEVI-QHNQ-------LDALITPINDVF- 117
QKS A + C NDW+LN+D DE LS+ L+ EI + HNQ + LI ND
Sbjct 64 QKSFAESLCVNDWILNIDADEELSKELQDEIEYIFASHNQDRYLAYQIKLLIMHRNDQKP 123
Query 118 -LGVPNSKHTKKHAKVRFFRKAKGQYDLANKVHENVIVE------GESRRAVHDIYHFGE 170
+ P +K T+ + K + A + + H++V+ G+ YH+
Sbjct 124 RMFAPFNKCTRLYNK----KFASFANTVNSTTHDSVVFNKDVDFAGKIYLLNEAAYHYSG 179
Query 171 SSIFVKVEKNNQYSNLKAAEKFQKGKTPSLAKLVLVMPMTFIKSYFIRRSCFNGWRGFVN 230
+SI V K N YS+ +A + ++GK S +L M F K++FIRR G+ GFV+
Sbjct 180 TSIEQLVTKANFYSSEQAKDLVKQGKKLSNFRLTTEMIWWFFKAFFIRRYFVFGFDGFVD 239
Query 231 SMINAFYAFLKEAKLFEQSMNKDK 254
SMI AF FL+ AKL +S+ K K
Sbjct 240 SMIFAFARFLRLAKL-RESLLKSK 262
>Q92IX8 Uncharacterized glycosyltransferase RC0292 [Rickettsia
conorii (strain ATCC VR-613 / Malish 7)]
Length=282
Score = 118 bits (296), Expect = 2e-35
Identities = 93/260 (36%), Positives = 135/260 (52%), Gaps = 22/260 (8%)
Query 8 SVYIVTLNCEAWLFKTLQSVQDF-DEVIILDSGSIDATYAIAQQFDNVHIEHQDWQGYAG 66
S +I+T N + + + SV++ DEVI++DS S D T AIA++ + + W GY G
Sbjct 10 SAFIITKNESTRVARAINSVKNITDEVIVVDSESTDDTVAIAEKL-GAKVVIKPWLGYVG 68
Query 67 QKSLALAKCRNDWVLNLDGDEVLSEGLKQEIAEVI-QHNQ-------LDALITPINDVF- 117
QKS A + C NDWVLN+D DE LS+ L+ EI + HNQ + LI ND
Sbjct 69 QKSFAESLCVNDWVLNIDADEELSKELQDEIEYIFASHNQDRYLAYQIKLLIMHRNDQKP 128
Query 118 -LGVPNSKHTKKHAKVRFFRKAKGQYDLANKVHENVIVE------GESRRAVHDIYHFGE 170
+ P +K T+ + K + A + + H++VI G+ YH+
Sbjct 129 RMFAPFNKCTRLYNK----KFASFANTVNSTTHDSVIFNKDVDFAGKIYLLNEAAYHYSG 184
Query 171 SSIFVKVEKNNQYSNLKAAEKFQKGKTPSLAKLVLVMPMTFIKSYFIRRSCFNGWRGFVN 230
+SI V K N YSN +A + ++GK S +L M F K++FIRR G GFV+
Sbjct 185 TSIEQLVTKANFYSNEQAKDLVKQGKKLSNFRLTTEMIWWFFKAFFIRRYFVFGVDGFVD 244
Query 231 SMINAFYAFLKEAKLFEQSM 250
S+I AF FL+ KL E S+
Sbjct 245 SIIFAFARFLRLTKLRESSL 264
>Q68XF1 Uncharacterized glycosyltransferase RT0209 [Rickettsia
typhi (strain ATCC VR-144 / Wilmington)]
Length=292
Score = 117 bits (293), Expect = 6e-35
Identities = 84/256 (33%), Positives = 134/256 (52%), Gaps = 14/256 (5%)
Query 8 SVYIVTLNCEAWLFKTLQSVQDF-DEVIILDSGSIDATYAIAQQFDNVHIEHQDWQGYAG 66
S +I+T N EA + + + SV++ DEVI++D+ S D T IA+ + + W GY G
Sbjct 5 STFIITKNEEARIARAINSVKNITDEVIVVDNESTDDTVHIAKTL-GAKVIVKPWLGYVG 63
Query 67 QKSLALAKCRNDWVLNLDGDEVLSEGLKQEIAEVIQHNQLDALITPINDVFLGVPNSKHT 126
QKS A + C NDWVLN+D DE LS+ L+ EI + + D + + + + +
Sbjct 64 QKSFAESMCVNDWVLNIDADEELSQELQDEIEYIFASHNQDRYLAYQIKLLIMYRGDQKS 123
Query 127 KKHAK----VRFFRKAKGQY--DLANKVHENVIVE------GESRRAVHDIYHFGESSIF 174
+ A +R + K + + + H++V+ G+ YH+ +SI
Sbjct 124 RMFAPLNKCIRLYNKKFASFANTINSTTHDSVVFNKDVDFIGKIYLLNGIAYHYSGTSIE 183
Query 175 VKVEKNNQYSNLKAAEKFQKGKTPSLAKLVLVMPMTFIKSYFIRRSCFNGWRGFVNSMIN 234
V K N YS+ +A + ++GK S +L M F+K++FIRR G+ GFV+S+I
Sbjct 184 QLVNKANFYSSEQAKDLVKQGKKFSNFRLATEMIWWFLKAFFIRRYFVFGFDGFVDSIIF 243
Query 235 AFYAFLKEAKLFEQSM 250
AF FL+ AKL E S+
Sbjct 244 AFARFLRLAKLRELSL 259
>O05944 Uncharacterized glycosyltransferase RP128 [Rickettsia
prowazekii (strain Madrid E)]
Length=292
Score = 114 bits (285), Expect = 8e-34
Identities = 86/256 (34%), Positives = 133/256 (52%), Gaps = 14/256 (5%)
Query 8 SVYIVTLNCEAWLFKTLQSVQDF-DEVIILDSGSIDATYAIAQQFDNVHIEHQDWQGYAG 66
S +I+T N A + + + SV++ DEVI++D+ S D T IA+ + + W GY G
Sbjct 5 STFIITKNESARIARAINSVKNITDEVIVVDNESTDDTVHIAKTL-GAQVIVKPWLGYVG 63
Query 67 QKSLALAKCRNDWVLNLDGDEVLSEGLKQEIAEVI-QHNQLDALITPINDVFLGVPNSK- 124
QKS A + C NDWVLN+D DE LS+ L+ EI + HNQ L I + + + K
Sbjct 64 QKSFAESMCVNDWVLNIDADEELSQELQDEIEYIFTSHNQDRYLAYQIKLLIMYRGDQKP 123
Query 125 --HTKKHAKVRFFRKAKGQY--DLANKVHENVIVE------GESRRAVHDIYHFGESSIF 174
+ R + K + + + H++V+ G+ YH+ +SI
Sbjct 124 RMFAPLNKCTRLYNKKFASFANTINSTTHDSVVFNKDVDFTGKIYLLNGIAYHYSGTSIE 183
Query 175 VKVEKNNQYSNLKAAEKFQKGKTPSLAKLVLVMPMTFIKSYFIRRSCFNGWRGFVNSMIN 234
V K N YS+ +A + ++GK S +L M F+K++FIRR G+ GFV+S+I
Sbjct 184 QLVNKANFYSSEQAKDLVKQGKKLSNFRLATEMIWCFLKAFFIRRYFVFGFDGFVDSIIF 243
Query 235 AFYAFLKEAKLFEQSM 250
AF FL+ AKL + S+
Sbjct 244 AFARFLRLAKLRDLSL 259
>P44029 Uncharacterized glycosyltransferase HI_0653 [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=254
Score = 99.4 bits (246), Expect = 2e-28
Identities = 75/250 (30%), Positives = 129/250 (52%), Gaps = 6/250 (2%)
Query 8 SVYIVTLNCEAWLFKTLQSVQDF-DEVIILDSGSIDATYAIAQQFDNVHIEHQDWQGYAG 66
SV ++ N L L +V+D+ DE+IILDSGS D T IA + E+ DWQG+
Sbjct 5 SVAMIIKNEAQDLANCLDTVKDWVDEIIILDSGSTDNTKEIALSYGAKFYENSDWQGFGK 64
Query 67 QKSLALAKCRNDWVLNLDGDEVLSEGLKQEIAEVIQHNQLDAL--ITPINDVFLGVPNSK 124
Q+ LA +D+VL LD DE ++ L+Q I +++++ + + I +++VF
Sbjct 65 QRQLAQQYVTSDYVLWLDADERVTPKLQQAILSAVKNDRENTVYEIPRVSEVFGREIRHS 124
Query 125 HTKKHAKVRFFRKAKGQYDLANKVHENVIVEGESR--RAVHDIYHFGESSIFVKVEKNNQ 182
VR +R QY+ + VHE V ++ + D+ HF SI + K+
Sbjct 125 GWYPDYVVRLYRTNYAQYN-DSLVHEKVEFPAGTKVEKLTGDLEHFTYKSIHHYLVKSAG 183
Query 183 YSNLKAAEKFQKGKTPSLAKLVLVMPMTFIKSYFIRRSCFNGWRGFVNSMINAFYAFLKE 242
Y+ A ++ KGK +L + + F+K Y ++ +G +GF+ ++++A F+K
Sbjct 184 YAKAWADQRQAKGKKATLWQGISHALGCFVKMYLLKAGFLDGKQGFLLAVLSAHSTFVKY 243
Query 243 AKLFEQSMNK 252
A L+E+ +K
Sbjct 244 ADLWERDQHK 253
>Q9XC90 Lipopolysaccharide core biosynthesis glycosyltransferase
WaaE [Klebsiella pneumoniae]
Length=258
Score = 97.1 bits (240), Expect = 1e-27
Identities = 77/252 (31%), Positives = 124/252 (49%), Gaps = 6/252 (2%)
Query 8 SVYIVTLNCEAWLFKTLQSVQDFDEVIILDSGSIDATYAIAQQFDNVHIEHQDWQGYAGQ 67
SV ++ N L L SV DE+I+LDSGS D T +A++ H DW+GY Q
Sbjct 6 SVVMIAKNAADLLPDCLGSVSWADEIIVLDSGSTDNTVELARRLGAQVYTHTDWRGYGIQ 65
Query 68 KSLALAKCRNDWVLNLDGDEVLSEGLKQEIAEVIQHNQLDALIT-PINDVFLGVPNSKHT 126
+ A DWVL +D DE ++ L+Q I +V+ Q A+ + + FLG +H+
Sbjct 66 RQRAQDYATGDWVLMIDTDERVTPELRQAILKVLDAPQRGAIYSIARRNYFLG-RFMRHS 124
Query 127 KKHAK--VRFFRKAKGQYDLANKVHENVIVEG-ESRRAVHDIYHFGESSIFVKVEKNNQY 183
+ +R + +A+ +Y+ N VHE++ G E D+ H +K Y
Sbjct 125 GWYPDRVLRLYERARYRYN-DNLVHESLDSLGAEVIPLTGDLLHLTCRDFAGFQQKQLAY 183
Query 184 SNLKAAEKFQKGKTPSLAKLVLVMPMTFIKSYFIRRSCFNGWRGFVNSMINAFYAFLKEA 243
+ A E+ QKGK S+A + F+K+ +R +G +G++ +M+NA Y F K
Sbjct 184 AAAWALERHQKGKKTSMAGIFSHTLGAFLKTLLLRGGVLDGKQGWLLAMVNAQYTFTKYT 243
Query 244 KLFEQSMNKDKK 255
+L+ S +K
Sbjct 244 ELWALSHGYSEK 255
>Q54435 Lipopolysaccharide core biosynthesis glycosyltransferase
KdtX [Serratia marcescens]
Length=257
Score = 89.0 bits (219), Expect = 1e-24
Identities = 70/271 (26%), Positives = 124/271 (46%), Gaps = 30/271 (11%)
Query 1 MIPKIACSVYIVTLNCEAWLFKTLQSVQDFDEVIILDSGSIDATYAIAQQFDNVHIEHQD 60
M + + SV ++ N L L+SV DE+I+LDSGS D + A+A+ H D
Sbjct 1 MSSRKSLSVVMIAKNEAGLLPDCLRSVAWADEIIVLDSGSEDDSVAVAESLGAKVFTHTD 60
Query 61 WQGYAGQKSLALAKCRNDWVLNLDGDEVLSEGLKQEIAEVIQHNQLDALIT-PINDVFLG 119
WQG+ Q+ LA + +D+VL +D DE ++ L+Q I V+ A+ + ++FLG
Sbjct 61 WQGFGKQRQLAQSYASHDYVLMIDADERVTPELRQSIERVLNAPDDGAVYSCARRNLFLG 120
Query 120 VPNSKHTKKHAKVRFFRKAKGQYDLANKVHENVIVEGESRRAVHDIYHFGESSI------ 173
RF R + D N+++ N + VH++ + G++ +
Sbjct 121 -------------RFMRHSGWYPDRVNRLYANSRYR-YNDDLVHELLNIGDAKVIPLSGD 166
Query 174 ---------FVKVEKNNQYSNLKAAEKFQKGKTPSLAKLVLVMPMTFIKSYFIRRSCFNG 224
F K +Y+ A ++ + GK ++ F+K++ +R +G
Sbjct 167 MLHLTCRDFFAFQRKQLRYAEEWATQRHRAGKRCGYLSILTHTLGAFVKTWLLRAGFLDG 226
Query 225 WRGFVNSMINAFYAFLKEAKLFEQSMNKDKK 255
+G + +++NA Y F K A L+ N +K
Sbjct 227 KQGLLLAVVNAQYTFNKYAALWALGRNYSEK 257
>O64036 Glycosyltransferase SunS [Bacillus phage SPbeta]
Length=422
Score = 57.8 bits (138), Expect = 4e-13
Identities = 51/194 (26%), Positives = 91/194 (47%), Gaps = 27/194 (14%)
Query 3 PKIACSVYIVTLNCEAWLFKTLQSVQD-FDEVIILDSGSIDATYAIAQ-QFDNVHIEHQD 60
P I C I+ N + K L SV+D F+E+I+LDS S D T I + F +V I+++
Sbjct 54 PTITCG--IIVYNESKRIKKCLNSVKDDFNEIIVLDSYSTDDTVDIIKCDFPDVEIKYEK 111
Query 61 WQ---GYAGQKSLALAKCRNDWVLNLDGDEVLS---EGLKQEIAEVIQHNQLDALITPIN 114
W+ YA K + A ++W+ +D D + S +G ++A V++ +D +++P
Sbjct 112 WKNDFSYARNKIIEYA--TSEWIYFIDADNLYSKENKGKIAKVARVLEFFSIDCVVSPYI 169
Query 115 DVFLGVPNSKHTKKHAKVRFFRKAKGQYDLANKVHENVIVEGES--------RRAVHDIY 166
+ + G ++ R + G+ KVHE + S + H+ Y
Sbjct 170 EEYTG-------HLYSDTRRMFRLNGKVKFHGKVHEEPMNYNHSLPFNFIVNLKVYHNGY 222
Query 167 HFGESSIFVKVEKN 180
+ E++I K +N
Sbjct 223 NPSENNIKSKTRRN 236
>O31986 SPbeta prophage-derived glycosyltransferase SunS [Bacillus
subtilis (strain 168)]
Length=422
Score = 57.8 bits (138), Expect = 4e-13
Identities = 51/194 (26%), Positives = 91/194 (47%), Gaps = 27/194 (14%)
Query 3 PKIACSVYIVTLNCEAWLFKTLQSVQD-FDEVIILDSGSIDATYAIAQ-QFDNVHIEHQD 60
P I C I+ N + K L SV+D F+E+I+LDS S D T I + F +V I+++
Sbjct 54 PTITCG--IIVYNESKRIKKCLNSVKDDFNEIIVLDSYSTDDTVDIIKCDFPDVEIKYEK 111
Query 61 WQ---GYAGQKSLALAKCRNDWVLNLDGDEVLS---EGLKQEIAEVIQHNQLDALITPIN 114
W+ YA K + A ++W+ +D D + S +G ++A V++ +D +++P
Sbjct 112 WKNDFSYARNKIIEYA--TSEWIYFIDADNLYSKENKGKIAKVARVLEFFSIDCVVSPYI 169
Query 115 DVFLGVPNSKHTKKHAKVRFFRKAKGQYDLANKVHENVIVEGES--------RRAVHDIY 166
+ + G ++ R + G+ KVHE + S + H+ Y
Sbjct 170 EEYTG-------HLYSDTRRMFRLNGKVKFHGKVHEEPMNYNHSLPFNFIVNLKVYHNGY 222
Query 167 HFGESSIFVKVEKN 180
+ E++I K +N
Sbjct 223 NPSENNIKSKTRRN 236
>P42460 TPR repeat-containing protein Synpcc7942_0270 [Synechococcus
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=403
Score = 48.5 bits (114), Expect = 5e-10
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query 22 KTLQSVQD-FDEVIILDSGSIDATYAIAQQFDNVHIEHQDW-QGYAGQKSLALAKCRNDW 79
+ L SV+D DE+I+LD+GS D T AIA + + H DW ++ ++ A+A DW
Sbjct 25 RCLASVKDQVDELIVLDTGSRDRTPAIATE-AGAKLLHTDWADDFSAARNQAIAAATGDW 83
Query 80 VLNLDGDEVL 89
+L LD DE L
Sbjct 84 ILVLDADEEL 93
>P26403 O antigen biosynthesis rhamnosyltransferase RfbN [Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=314
Score = 35.4 bits (80), Expect = 8e-06
Identities = 21/64 (33%), Positives = 39/64 (61%), Gaps = 3/64 (5%)
Query 31 DEVIILDSGSIDATYAIAQQFDNVHIEHQDWQ--GYAGQKSLALAKCRN-DWVLNLDGDE 87
D++I++DSGS D T +A N+ I + D + + G ++LA+AK + D ++ L D
Sbjct 31 DKLIVIDSGSKDETVPLASDLKNISIFNIDSKDFNHGGTRNLAVAKTLDADVIIFLTQDA 90
Query 88 VLSE 91
+L++
Sbjct 91 ILAD 94
Lambda K H a alpha
0.323 0.136 0.407 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 742092
Database: 1a0c182b37361c1609554f5b351383a5.SwissProt.fasta
Posted date: May 9, 2024 8:28 PM
Number of letters in database: 4,043
Number of sequences in database: 13
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
