BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 54c0de474df022cef0c9827fd3b8d64e.SwissProt.fasta
7 sequences; 3,927 total letters
Query= ACIAD0604
Length=253
Score E
Sequences producing significant alignments: (Bits) Value
P71398 Lsg locus putative protein 4 [Haemophilus influenzae (stra... 47.8 5e-10
A5PMF6 Procollagen galactosyltransferase 1 [Danio rerio] 42.7 4e-08
Q8K297 Procollagen galactosyltransferase 1 [Mus musculus] 38.5 9e-07
Q7Q021 Glycosyltransferase 25 family member [Anopheles gambiae] 37.4 2e-06
Q8IPK4 Glycosyltransferase 25 family member [Drosophila melanogas... 37.0 3e-06
A5PK45 Procollagen galactosyltransferase 1 [Bos taurus] 37.0 3e-06
Q8NBJ5 Procollagen galactosyltransferase 1 [Homo sapiens] 35.4 9e-06
>P71398 Lsg locus putative protein 4 [Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=257
Score = 47.8 bits (112), Expect = 5e-10
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 22/124 (18%)
Query 4 YVISIEENDSIRLKQFFSQP------FFSSLNVRPKRMGVKGADLLAKEYFEQAVKGREI 57
Y+IS+++ D R + FFSQ FS++N K A +++ +
Sbjct 5 YLISLDK-DIQRRELFFSQKNTEDFQVFSAINTMQKDWDELAAIFNIEQFKAHYFRN--- 60
Query 58 PLTPGELGCTLSHLQALKDFLS----TEDSHALILEDDAIIPEYFDLN-------QLDQE 106
+T GE+GCTLSHL + + EDS+AL+ EDDA+ F N +L+ E
Sbjct 61 -VTKGEIGCTLSHLSVYQKIVEDNDIAEDSYALVCEDDALFHSDFQQNLTALLSEKLEAE 119
Query 107 IIKL 110
II L
Sbjct 120 IILL 123
>A5PMF6 Procollagen galactosyltransferase 1 [Danio rerio]
Length=604
Score = 42.7 bits (99), Expect = 4e-08
Identities = 39/126 (31%), Positives = 60/126 (48%), Gaps = 14/126 (11%)
Query 58 PLTPGELGCTLSHLQALKDFLSTEDSHALILEDDAIIPEYFD--LNQLDQEIIKLRLPPK 115
PLT GELGC LSH + + +L++EDD +F L L QE+ +L
Sbjct 386 PLTKGELGCFLSHYNIWNEIVDRGLQSSLVIEDDLRFEVFFKRRLQNLMQEVQSQQL-DW 444
Query 116 SLLSLGGIQMKESRKVRGKPYSAMLLKHKILEVIPDYYHRVNYAMAYVIDRDMAQLLLQY 175
L+ +G +M+ R + P H ++E DY + + + YVI AQ LL+
Sbjct 445 DLIYIGRKRMQVERPEKSVPRI-----HSLVEA--DYSY---WTLGYVISLRGAQKLLR- 493
Query 176 HHPLRR 181
PL++
Sbjct 494 AEPLKK 499
>Q8K297 Procollagen galactosyltransferase 1 [Mus musculus]
Length=617
Score = 38.5 bits (88), Expect = 9e-07
Identities = 35/118 (30%), Positives = 55/118 (47%), Gaps = 13/118 (11%)
Query 58 PLTPGELGCTLSHLQALKDFLSTEDSHALILEDDAIIPEYFD--LNQLDQEIIKLRLPPK 115
PLT GELGC LSH K+ + +L+ EDD +F L L +++ + L
Sbjct 399 PLTKGELGCFLSHYNIWKEVVDRGLQKSLVFEDDLRFEIFFKRRLMNLMRDVEREGL-DW 457
Query 116 SLLSLGGIQMKESRKVRGKPYSAMLLKHKILEVIPDYYHRVNYAMAYVIDRDMAQLLL 173
L+ +G +M+ + P+ L++ DY + + +AYVI AQ LL
Sbjct 458 DLIYVGRKRMQVEHPEKAVPHVRNLVE-------ADYSY---WTLAYVISLQGAQKLL 505
>Q7Q021 Glycosyltransferase 25 family member [Anopheles gambiae]
Length=592
Score = 37.4 bits (85), Expect = 2e-06
Identities = 27/105 (26%), Positives = 44/105 (42%), Gaps = 12/105 (11%)
Query 3 IYVISIEENDSIRLKQFFSQPFFSSLNVRPKRM-GVKGADLLAKEYFEQAVKG------- 54
IY+I++E R K F L + + V G L K+ ++ ++
Sbjct 321 IYMINLERRTERRTKML---KHFDLLGLDVEHFPAVDGKQLSDKKVYDMGIRFLPGYADP 377
Query 55 -REIPLTPGELGCTLSHLQALKDFLSTEDSHALILEDDAIIPEYF 98
+ P+T GE+GC LSH + + L+LEDD +F
Sbjct 378 FHKRPMTMGEIGCFLSHYNIWERMVRLNQQEVLVLEDDIRFEPFF 422
>Q8IPK4 Glycosyltransferase 25 family member [Drosophila melanogaster]
Length=612
Score = 37.0 bits (84), Expect = 3e-06
Identities = 30/109 (28%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query 2 QIYVISIEENDSIRLKQFFSQPFFSSLNVRPKRM-GVKGADLLAKEYFEQAVK---GREI 57
+I++I+++ R K + F + + + V G +L + E V+ G E
Sbjct 334 RIFMINLKRRPERREKM---ERLFDEIGIEAEHFPAVDGKELSTERLLEMGVRFLPGYED 390
Query 58 P-----LTPGELGCTLSHLQALKDFLSTEDSHALILEDDAIIPEYFDLN 101
P +T GE+GC LSH + + LILEDD YF N
Sbjct 391 PYHHRAMTMGEIGCFLSHYNIWVMMVRKQLKEVLILEDDIRFEPYFRQN 439
Score = 16.9 bits (32), Expect = 6.5
Identities = 19/68 (28%), Positives = 29/68 (43%), Gaps = 12/68 (18%)
Query 59 LTPGELGCTLSHLQALKDFLSTEDSHALILEDDAIIPEYFDL-NQLDQEIIKLRLPPKSL 117
L P E G TL H D + ++++ + +P D L+++ P KS
Sbjct 281 LQPLEPGDTLDH-----DVQQLVNLKSIMVNELGAVPPLLDYYKHLEKK------PEKSK 329
Query 118 LSLGGIQM 125
LSL I M
Sbjct 330 LSLDRIFM 337
Score = 16.5 bits (31), Expect = 8.6
Identities = 5/8 (63%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
Query 151 DYYHRVNY 158
D YH V+Y
Sbjct 88 DLYHSVSY 95
Score = 16.5 bits (31), Expect = 8.6
Identities = 11/36 (31%), Positives = 15/36 (42%), Gaps = 3/36 (8%)
Query 122 GIQMKESRKVRGKPYSAMLLKHKILEVIPDY---YH 154
GI+ + V GK S L + +P Y YH
Sbjct 358 GIEAEHFPAVDGKELSTERLLEMGVRFLPGYEDPYH 393
>A5PK45 Procollagen galactosyltransferase 1 [Bos taurus]
Length=623
Score = 37.0 bits (84), Expect = 3e-06
Identities = 35/118 (30%), Positives = 54/118 (46%), Gaps = 13/118 (11%)
Query 58 PLTPGELGCTLSHLQALKDFLSTEDSHALILEDDAIIPEYFD--LNQLDQEIIKLRLPPK 115
PLT GELGC LSH K+ + +L+ EDD +F L L Q++ + L
Sbjct 405 PLTKGELGCFLSHYNIWKEVVDRGLQKSLVFEDDLRFEIFFKRRLMNLMQDVEREGL-DW 463
Query 116 SLLSLGGIQMKESRKVRGKPYSAMLLKHKILEVIPDYYHRVNYAMAYVIDRDMAQLLL 173
L+ +G +M+ + P L++ DY + + +AYVI A+ LL
Sbjct 464 DLIYVGRKRMQVEHPEKAVPRVRNLVE-------ADYSY---WTLAYVISLQGARKLL 511
>Q8NBJ5 Procollagen galactosyltransferase 1 [Homo sapiens]
Length=622
Score = 35.4 bits (80), Expect = 9e-06
Identities = 17/41 (41%), Positives = 22/41 (54%), Gaps = 0/41 (0%)
Query 58 PLTPGELGCTLSHLQALKDFLSTEDSHALILEDDAIIPEYF 98
PLT GELGC LSH K+ + +L+ EDD +F
Sbjct 404 PLTKGELGCFLSHYNIWKEVVDRGLQKSLVFEDDLRFEIFF 444
Lambda K H a alpha
0.324 0.140 0.409 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 761460
Database: 54c0de474df022cef0c9827fd3b8d64e.SwissProt.fasta
Posted date: May 31, 2024 2:53 PM
Number of letters in database: 3,927
Number of sequences in database: 7
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40