BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 4a7ebfc0bf316067cdc84ec618a69090.SwissProt.fasta
21 sequences; 10,349 total letters
Query= ACIAD0626
Length=566
Score E
Sequences producing significant alignments: (Bits) Value
P30847 Signal transduction histidine-protein kinase BaeS [Escheri... 212 2e-65
Q7A2R7 Signal transduction histidine-protein kinase ArlS [Staphyl... 132 2e-36
Q5HG05 Signal transduction histidine-protein kinase ArlS [Staphyl... 132 2e-36
Q2YY04 Signal transduction histidine-protein kinase ArlS [Staphyl... 132 2e-36
Q2FH24 Signal transduction histidine-protein kinase ArlS [Staphyl... 132 2e-36
Q9KJN3 Signal transduction histidine-protein kinase ArlS [Staphyl... 132 2e-36
Q4L6C5 Signal transduction histidine-protein kinase ArlS [Staphyl... 128 4e-35
O34638 Sensor histidine kinase YkoH [Bacillus subtilis (strain 168)] 127 8e-35
P94414 Sensor histidine kinase YclK [Bacillus subtilis (strain 168)] 122 7e-33
P23545 Alkaline phosphatase synthesis sensor protein PhoR [Bacill... 118 3e-31
Q8CSL7 Signal transduction histidine-protein kinase ArlS [Staphyl... 115 2e-30
Q5HPC4 Signal transduction histidine-protein kinase ArlS [Staphyl... 113 6e-30
Q49XM6 Signal transduction histidine-protein kinase ArlS [Staphyl... 112 1e-29
Q07737 Sensor protein ChvG [Agrobacterium fabrum (strain C58 / AT... 113 2e-29
Q45614 Sensor histidine kinase WalK [Bacillus subtilis (strain 168)] 113 2e-29
Q04943 Signal transduction histidine-protein kinase AfsQ2 [Strept... 111 5e-29
Q9L523 Sensor protein SrrB [Staphylococcus aureus] 110 1e-28
Q5HFT1 Sensor protein SrrB [Staphylococcus aureus (strain COL)] 110 1e-28
Q9ZHD4 Probable sensor kinase SilS [Salmonella typhimurium] 108 5e-28
P23621 Phosphate regulon sensor protein PhoR [Pseudomonas aerugin... 106 1e-27
P0AE82 Sensor histidine kinase CpxA [Escherichia coli (strain K12)] 106 2e-27
>P30847 Signal transduction histidine-protein kinase BaeS [Escherichia
coli (strain K12)]
Length=467
Score = 212 bits (539), Expect = 2e-65
Identities = 144/446 (32%), Positives = 231/446 (52%), Gaps = 39/446 (9%)
Query 134 DEQERRFLQDNLPSEYQPFEGLKFPLNSNQNFFRP----DGDNKKKEPPRGPEMANLMHH 189
+EQ + L D L +Y +F N+++ F+ + DN + +P G
Sbjct 47 NEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPG--------- 97
Query 190 DGKKRFIAMPDRLGLSSRLSLYDAKHQFIVGEYSN--EQISYRPIMVNDRVVGYLGLKPV 247
MP G ++ + D ++ +VG + + RPI+VN VG + PV
Sbjct 98 --------MPPH-GWRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPV 148
Query 248 LDEDDALSINFFSNQKRFLLLIYLFSVLASLVAALLLATYFKKPIQRLLNATRELTRGRY 307
INF Q++ LI + L + +A LLA P++RL++ T +L G +
Sbjct 149 ERLTRNTDINFDKQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDF 208
Query 308 QHQVEIKRNDELGDLATELNQLAKILYQHEESRRQWVADTSHELKTPLSVLQAQIEAMQD 367
+V DELG LA + NQLA L ++++ RR ++AD SHEL+TPL+VL+ ++EA+QD
Sbjct 209 TTRVTPTSEDELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQD 268
Query 368 GIRKATPEHLAAMMSQISSLKKLTQDLADLAQADAQQLKCYFAEVDPWDVILQEVENFKP 427
G+RK TPE +A++ +++ +L KL DL L+ +D L A VD ++ F+
Sbjct 269 GVRKFTPETVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLEVAGGAFRE 328
Query 428 KIEQAQL--------SIVVEGAGTKLQLDIDRFKQIMVNLLSNSVRYTEAGGQIKLHTLQ 479
+ L SI V G D DR Q+ NLL NS+RYT++GG +++ Q
Sbjct 329 RFASRGLKLQFSLPDSITVFG-------DRDRLMQLFNNLLENSLRYTDSGGSLQISAGQ 381
Query 480 DEEQWSVIVDDSPLGLNDEQLSRLGERFYRVDDSRTRSTGGTGLGLALSYKLAQALGGQL 539
++ + DS G++D+QL +L ERFYR + SR R++GG+GLGLA+ + +A G++
Sbjct 382 RDKTVRLTFADSAPGVSDDQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRI 441
Query 540 RFDHSPLGGLRCILTFPKTHSNIKEI 565
HSP GG+ + P +E+
Sbjct 442 IAAHSPFGGVSITVELPLERDLQREV 467
Score = 30.4 bits (67), Expect = 0.003
Identities = 20/72 (28%), Positives = 33/72 (46%), Gaps = 8/72 (11%)
Query 1 LKIRRVPIALRLFLTVLLTTLVITTLSLGVLHW----TMQKNFAKYVADVEMQKLDHLIT 56
+K R I +LFL + T +V+ L +HW + ++ F Y+ Q+L L
Sbjct 1 MKFWRPGITGKLFLAIFATCIVL----LISMHWAVRISFERGFIDYIKHGNEQRLQLLSD 56
Query 57 NLANVYNIYGDW 68
L Y +G+W
Sbjct 57 ALGEQYAQHGNW 68
>Q7A2R7 Signal transduction histidine-protein kinase ArlS [Staphylococcus
aureus (strain Mu50 / ATCC 700699)]
Length=451
Score = 132 bits (331), Expect = 2e-36
Identities = 98/387 (25%), Positives = 186/387 (48%), Gaps = 29/387 (7%)
Query 182 EMANLMHHDGKKRFIAMP--DRLGLSSRLSLYDAKHQFIVGEYSNEQI---------SYR 230
++ NL H K A+ LG + +YD +H + E SN+ Y
Sbjct 51 DINNLFHSKPVKDISALDLNASLGNFQEIIIYD-EHNNKLFETSNDNTVRVEPGYEHRYF 109
Query 231 PIMVNDRVVG--YLGLKPVLDEDD----ALSINFFSNQKRFLLLIYL----FSVLASLVA 280
++ R G YL +K + D +L I+ N + +Y+ F V+A+++
Sbjct 110 DRVIKKRYKGIEYLIIKEPITTQDFKGYSLLIHSLENYDNIVKSLYIIALAFGVIATIIT 169
Query 281 ALL---LATYFKKPIQRLLNATRELTRGRYQHQVEIKRN-DELGDLATELNQLAKILYQH 336
A + +T KP+ L N E+ R +Q+++++ N +E+ +LA N++ + +
Sbjct 170 ATISYVFSTQITKPLVSLSNKMIEIRRDGFQNKLQLNTNYEEIDNLANTFNEMMSQIEES 229
Query 337 EESRRQWVADTSHELKTPLSVLQAQIEAMQDGIRK---ATPEHLAAMMSQISSLKKLTQD 393
+RQ+V D SHEL+TPL ++Q + +Q +K E L + +++ + KL ++
Sbjct 230 FNQQRQFVEDASHELRTPLQIIQGHLNLIQRWGKKDPAVLEESLNISIEEMNRIIKLVEE 289
Query 394 LADLAQADAQQLKCYFAEVDPWDVILQEVENFKPKIEQAQLSIVVEGAGTKLQLDIDRFK 453
L +L + D + V D I + + K Q + ++++ +F+
Sbjct 290 LLELTKGDVNDISSEAQTVHINDEIRSRIHSLKQLHPDYQFDTDLTSKNLEIKMKPHQFE 349
Query 454 QIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDDSPLGLNDEQLSRLGERFYRVDDS 513
Q+ + + N+++Y +IK+ T +Q + + D +G+ +E + +RFYRVD S
Sbjct 350 QLFLIFIDNAIKYDVKNKKIKVKTRLKNKQKIIEITDHGIGIPEEDQDFIFDRFYRVDKS 409
Query 514 RTRSTGGTGLGLALSYKLAQALGGQLR 540
R+RS GG GLGL+++ K+ Q GG ++
Sbjct 410 RSRSQGGNGLGLSIAQKIIQLNGGSIK 436
>Q5HG05 Signal transduction histidine-protein kinase ArlS [Staphylococcus
aureus (strain COL)]
Length=451
Score = 132 bits (331), Expect = 2e-36
Identities = 98/387 (25%), Positives = 186/387 (48%), Gaps = 29/387 (7%)
Query 182 EMANLMHHDGKKRFIAMP--DRLGLSSRLSLYDAKHQFIVGEYSNEQI---------SYR 230
++ NL H K A+ LG + +YD +H + E SN+ Y
Sbjct 51 DINNLFHSKPVKDISALDLNASLGNFQEIIIYD-EHNNKLFETSNDNTVRVEPGYEHRYF 109
Query 231 PIMVNDRVVG--YLGLKPVLDEDD----ALSINFFSNQKRFLLLIYL----FSVLASLVA 280
++ R G YL +K + D +L I+ N + +Y+ F V+A+++
Sbjct 110 DRVIKKRYKGIEYLIIKEPITTQDFKGYSLLIHSLENYDNIVKSLYIIALAFGVIATIIT 169
Query 281 ALL---LATYFKKPIQRLLNATRELTRGRYQHQVEIKRN-DELGDLATELNQLAKILYQH 336
A + +T KP+ L N E+ R +Q+++++ N +E+ +LA N++ + +
Sbjct 170 ATISYVFSTQITKPLVSLSNKMIEIRRDGFQNKLQLNTNYEEIDNLANTFNEMMSQIEES 229
Query 337 EESRRQWVADTSHELKTPLSVLQAQIEAMQDGIRK---ATPEHLAAMMSQISSLKKLTQD 393
+RQ+V D SHEL+TPL ++Q + +Q +K E L + +++ + KL ++
Sbjct 230 FNQQRQFVEDASHELRTPLQIIQGHLNLIQRWGKKDPAVLEESLNISIEEMNRIIKLVEE 289
Query 394 LADLAQADAQQLKCYFAEVDPWDVILQEVENFKPKIEQAQLSIVVEGAGTKLQLDIDRFK 453
L +L + D + V D I + + K Q + ++++ +F+
Sbjct 290 LLELTKGDVNDISSEAQTVHINDEIRSRIHSLKQLHPDYQFDTDLTSKNLEIKMKPHQFE 349
Query 454 QIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDDSPLGLNDEQLSRLGERFYRVDDS 513
Q+ + + N+++Y +IK+ T +Q + + D +G+ +E + +RFYRVD S
Sbjct 350 QLFLIFIDNAIKYDVKNKKIKVKTRLKNKQKIIEITDHGIGIPEEDQDFIFDRFYRVDKS 409
Query 514 RTRSTGGTGLGLALSYKLAQALGGQLR 540
R+RS GG GLGL+++ K+ Q GG ++
Sbjct 410 RSRSQGGNGLGLSIAQKIIQLNGGSIK 436
>Q2YY04 Signal transduction histidine-protein kinase ArlS [Staphylococcus
aureus (strain bovine RF122 / ET3-1)]
Length=451
Score = 132 bits (331), Expect = 2e-36
Identities = 95/386 (25%), Positives = 185/386 (48%), Gaps = 27/386 (7%)
Query 182 EMANLMHHDGKKRFIAMP--DRLGLSSRLSLYDAKHQFIVGEYSNEQISYRPIMVN---D 236
++ NL H K A+ LG + +YD + + ++ + P + D
Sbjct 51 DINNLFHSKPVKDISALDLNASLGNFQEIIIYDEHNNKLFETSNDNTVRVEPGYEHRYFD 110
Query 237 RVV-------GYLGLKPVLDEDD----ALSINFFSNQKRFLLLIYL----FSVLASLVAA 281
RV+ YL +K + D +L I+ N + +Y+ F V+A+++ A
Sbjct 111 RVIKKRYKGIDYLIIKEPITTQDFKGYSLLIHSLENYDNIVKSLYIIALAFGVIATIITA 170
Query 282 LL---LATYFKKPIQRLLNATRELTRGRYQHQVEIKRN-DELGDLATELNQLAKILYQHE 337
+ +T KP+ L N E+ R +Q+++++ N +E+ +LA N++ + +
Sbjct 171 TISYVFSTQITKPLVSLSNKMIEIRRDGFQNKLQLNTNYEEIDNLANTFNEMMSQIEESF 230
Query 338 ESRRQWVADTSHELKTPLSVLQAQIEAMQDGIRK---ATPEHLAAMMSQISSLKKLTQDL 394
+RQ+V D SHEL+TPL ++Q + +Q +K E L + +++ + KL ++L
Sbjct 231 NQQRQFVEDASHELRTPLQIIQGHLNLIQRWGKKDPAVLEESLNISIEEMNRIIKLVEEL 290
Query 395 ADLAQADAQQLKCYFAEVDPWDVILQEVENFKPKIEQAQLSIVVEGAGTKLQLDIDRFKQ 454
+L + D + V D I + + K Q + ++++ +F+Q
Sbjct 291 LELTKGDVNDISSEAQTVHINDEIRSRIHSLKQLHPDYQFDTDLTSKNLEIKMKPHQFEQ 350
Query 455 IMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDDSPLGLNDEQLSRLGERFYRVDDSR 514
+ + + N+++Y +IK+ T +Q + + D +G+ +E + +RFYRVD SR
Sbjct 351 LFLIFIDNAIKYDVKNKKIKVKTRLKNKQKIIEITDHGIGIPEEDQDFIFDRFYRVDKSR 410
Query 515 TRSTGGTGLGLALSYKLAQALGGQLR 540
+RS GG GLGL+++ K+ Q GG ++
Sbjct 411 SRSQGGNGLGLSIAQKIIQLNGGSIK 436
>Q2FH24 Signal transduction histidine-protein kinase ArlS [Staphylococcus
aureus (strain USA300)]
Length=451
Score = 132 bits (331), Expect = 2e-36
Identities = 98/387 (25%), Positives = 186/387 (48%), Gaps = 29/387 (7%)
Query 182 EMANLMHHDGKKRFIAMP--DRLGLSSRLSLYDAKHQFIVGEYSNEQI---------SYR 230
++ NL H K A+ LG + +YD +H + E SN+ Y
Sbjct 51 DINNLFHSKPVKDISALDLNASLGNFQEIIIYD-EHNNKLFETSNDNTVRVEPGYEHRYF 109
Query 231 PIMVNDRVVG--YLGLKPVLDEDD----ALSINFFSNQKRFLLLIYL----FSVLASLVA 280
++ R G YL +K + D +L I+ N + +Y+ F V+A+++
Sbjct 110 DRVIKKRYKGIEYLIIKEPITTQDFKGYSLLIHSLENYDNIVKSLYIIALAFGVIATIIT 169
Query 281 ALL---LATYFKKPIQRLLNATRELTRGRYQHQVEIKRN-DELGDLATELNQLAKILYQH 336
A + +T KP+ L N E+ R +Q+++++ N +E+ +LA N++ + +
Sbjct 170 ATISYVFSTQITKPLVSLSNKMIEIRRDGFQNKLQLNTNYEEIDNLANTFNEMMSQIEES 229
Query 337 EESRRQWVADTSHELKTPLSVLQAQIEAMQDGIRK---ATPEHLAAMMSQISSLKKLTQD 393
+RQ+V D SHEL+TPL ++Q + +Q +K E L + +++ + KL ++
Sbjct 230 FNQQRQFVEDASHELRTPLQIIQGHLNLIQRWGKKDPAVLEESLNISIEEMNRIIKLVEE 289
Query 394 LADLAQADAQQLKCYFAEVDPWDVILQEVENFKPKIEQAQLSIVVEGAGTKLQLDIDRFK 453
L +L + D + V D I + + K Q + ++++ +F+
Sbjct 290 LLELTKGDVNDISSEAQTVHINDEIRSRIHSLKQLHPDYQFDTDLTSKNLEIKMKPHQFE 349
Query 454 QIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDDSPLGLNDEQLSRLGERFYRVDDS 513
Q+ + + N+++Y +IK+ T +Q + + D +G+ +E + +RFYRVD S
Sbjct 350 QLFLIFIDNAIKYDVKNKKIKVKTRLKNKQKIIEITDHGIGIPEEDQDFIFDRFYRVDKS 409
Query 514 RTRSTGGTGLGLALSYKLAQALGGQLR 540
R+RS GG GLGL+++ K+ Q GG ++
Sbjct 410 RSRSQGGNGLGLSIAQKIIQLNGGSIK 436
>Q9KJN3 Signal transduction histidine-protein kinase ArlS [Staphylococcus
aureus (strain NCTC 8325 / PS 47)]
Length=451
Score = 132 bits (331), Expect = 2e-36
Identities = 98/387 (25%), Positives = 186/387 (48%), Gaps = 29/387 (7%)
Query 182 EMANLMHHDGKKRFIAMP--DRLGLSSRLSLYDAKHQFIVGEYSNEQI---------SYR 230
++ NL H K A+ LG + +YD +H + E SN+ Y
Sbjct 51 DINNLFHSKPVKDISALDLNASLGNFQEIIIYD-EHNNKLFETSNDNTVRVEPGYEHRYF 109
Query 231 PIMVNDRVVG--YLGLKPVLDEDD----ALSINFFSNQKRFLLLIYL----FSVLASLVA 280
++ R G YL +K + D +L I+ N + +Y+ F V+A+++
Sbjct 110 DRVIKKRYKGIEYLIIKEPITTQDFKGYSLLIHSLENYDNIVKSLYIIALAFGVIATIIT 169
Query 281 ALL---LATYFKKPIQRLLNATRELTRGRYQHQVEIKRN-DELGDLATELNQLAKILYQH 336
A + +T KP+ L N E+ R +Q+++++ N +E+ +LA N++ + +
Sbjct 170 ATISYVFSTQITKPLVSLSNKMIEIRRDGFQNKLQLNTNYEEIDNLANTFNEMMSQIEES 229
Query 337 EESRRQWVADTSHELKTPLSVLQAQIEAMQDGIRK---ATPEHLAAMMSQISSLKKLTQD 393
+RQ+V D SHEL+TPL ++Q + +Q +K E L + +++ + KL ++
Sbjct 230 FNQQRQFVEDASHELRTPLQIIQGHLNLIQRWGKKDPAVLEESLNISIEEMNRIIKLVEE 289
Query 394 LADLAQADAQQLKCYFAEVDPWDVILQEVENFKPKIEQAQLSIVVEGAGTKLQLDIDRFK 453
L +L + D + V D I + + K Q + ++++ +F+
Sbjct 290 LLELTKGDVNDISSEAQTVHINDEIRSRIHSLKQLHPDYQFDTDLTSKNLEIKMKPHQFE 349
Query 454 QIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDDSPLGLNDEQLSRLGERFYRVDDS 513
Q+ + + N+++Y +IK+ T +Q + + D +G+ +E + +RFYRVD S
Sbjct 350 QLFLIFIDNAIKYDVKNKKIKVKTRLKNKQKIIEITDHGIGIPEEDQDFIFDRFYRVDKS 409
Query 514 RTRSTGGTGLGLALSYKLAQALGGQLR 540
R+RS GG GLGL+++ K+ Q GG ++
Sbjct 410 RSRSQGGNGLGLSIAQKIIQLNGGSIK 436
>Q4L6C5 Signal transduction histidine-protein kinase ArlS [Staphylococcus
haemolyticus (strain JCSC1435)]
Length=453
Score = 128 bits (322), Expect = 4e-35
Identities = 87/299 (29%), Positives = 157/299 (53%), Gaps = 14/299 (5%)
Query 255 SINFFSNQKRFLLLIYL-FSVLASLVAA---LLLATYFKKPIQRLLNATRELTRGRYQHQ 310
S+ ++N R L + + F +LA+ + A + +T KP+ + N ++ R +Q++
Sbjct 144 SLEGYNNVVRSLYFVAIAFGLLATFIMAGISYIFSTQLTKPLVTMSNKMIQIRRDGFQNK 203
Query 311 VEIKRN-DELGDLATELNQLAKILYQHEES---RRQWVADTSHELKTPLSVLQAQIEAMQ 366
+E+K N +E +L N + +YQ EES +RQ+V D SHEL+TPL ++Q + +Q
Sbjct 204 LELKTNYEETDNLIDTFNDM---MYQIEESFNQQRQFVEDASHELRTPLQIIQGHLNLIQ 260
Query 367 DGIRK---ATPEHLAAMMSQISSLKKLTQDLADLAQADAQQLKCYFAEVDPWDVILQEVE 423
+K E L + +++ + KL ++L L + F EV+ + I ++
Sbjct 261 RWGKKDPAVLEESLNISLEEMNRITKLVEELLLLTKDKVNIQALEFEEVNINEEIRSRIK 320
Query 424 NFKPKIEQAQLSIVVEGAGTKLQLDIDRFKQIMVNLLSNSVRYTEAGGQIKLHTLQDEEQ 483
+ K Q + LQ++ +F+Q+++ + N+++Y + QI++ T +Q
Sbjct 321 SLKQLHPDYQFKTHLSKKPLTLQINRHQFEQLLLIFIDNAMKYDKDNKQIEIATQLRNKQ 380
Query 484 WSVIVDDSPLGLNDEQLSRLGERFYRVDDSRTRSTGGTGLGLALSYKLAQALGGQLRFD 542
S+ + D LG+ E + +RFYRVD SR+RS GG GLGL ++ K+ Q GG + D
Sbjct 381 ISIEITDHGLGIPKEDQEFIFDRFYRVDKSRSRSQGGNGLGLFIAEKIVQQYGGYITVD 439
>O34638 Sensor histidine kinase YkoH [Bacillus subtilis (strain
168)]
Length=454
Score = 127 bits (320), Expect = 8e-35
Identities = 90/306 (29%), Positives = 158/306 (52%), Gaps = 14/306 (5%)
Query 260 SNQKRFLLLIYLFSV-----LASLVAALLLATYFKKPIQRLLNATRELTRGRYQHQVEIK 314
+ + FLL I L + +AS A LLA PI+RL+ +++ R + + ++
Sbjct 145 TEESLFLLKIILIAASAAVCIASFFAGSLLARRIINPIRRLMITMKDIQRDKEFKTISLE 204
Query 315 --RNDELGDLATELNQLAKILYQHEESRRQWVADTSHELKTPLSVLQAQIEAMQD-GIRK 371
NDEL + N++A +L +H + ++Q+V D SHELKTPL+++++ M+ G +K
Sbjct 205 GQSNDELYQMGLTFNEMAMMLKEHYDKQQQFVQDASHELKTPLTIIESYSSLMKRWGAKK 264
Query 372 --ATPEHLAAMMSQISSLKKLTQDLADLAQADAQQLKCYFAEVDPWDVILQEVENFKPKI 429
E + A+ S+ +KKLT L LA++ Q L+ +D ++ + +
Sbjct 265 PEVLEESIEAIHSEAVHMKKLTNQLLALAKSH-QGLEVDLKTIDLIKAARAVMQTLQ-SV 322
Query 430 EQAQLSIVVEGAGTKLQLDIDRFKQIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVD 489
Q + + + ++ D +R KQ++ LL N+++Y+E ++ T SV
Sbjct 323 YQRDILLETDKESLLVKADEERIKQLLTILLDNAIKYSEKPIEMSAGTRNGRPFLSV--R 380
Query 490 DSPLGLNDEQLSRLGERFYRVDDSRTRSTGGTGLGLALSYKLAQALGGQLRFDHSPLGGL 549
D +G+ +E + L ERFYR D++R R TGGTGLGL+++ ++A G +L P G
Sbjct 381 DEGIGIPEEHIPHLFERFYRADEARNRKTGGTGLGLSIAKQIADEHGIELSVKSKPGQGT 440
Query 550 RCILTF 555
+ F
Sbjct 441 AVTMQF 446
>P94414 Sensor histidine kinase YclK [Bacillus subtilis (strain
168)]
Length=473
Score = 122 bits (306), Expect = 7e-33
Identities = 88/309 (28%), Positives = 160/309 (52%), Gaps = 23/309 (7%)
Query 269 IYLF-SVLASLVAALL----LATYFKKPIQRLLNATRELTRGRYQHQVEIKRNDELGDLA 323
+Y+F +V+++LV +L L+ + K IQ+L AT ++ G Y +E DE+G LA
Sbjct 165 LYMFYAVISTLVITILVSWLLSKFHVKRIQKLREATDKVASGDYDIHLENSYGDEIGVLA 224
Query 324 TELNQLAKILYQH-------EESRRQWVADTSHELKTPLSVLQAQIEAMQDGIRKATPEH 376
++ N +AK L Q E+ RRQ++AD SHELKTPL+ + +E + PE
Sbjct 225 SDFNIMAKKLKQSRDEIERLEKRRRQFIADVSHELKTPLTTINGLVEGLNS---HTIPED 281
Query 377 -----LAAMMSQISSLKKLTQDLADLAQADAQQLKCYFAEVDPWDVILQEVENFKPKIEQ 431
+ + + + +L ++ D + +QQ+ +V +V E+ + + E+
Sbjct 282 KKDKCFSLISEETKRMLRLVKENLDYEKIRSQQITLNKLDVPLIEVFEIVKEHLQQQAEE 341
Query 432 AQLSIVVEGAG-TKLQLDIDRFKQIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDD 490
Q ++++ + D DRF QI+VN+ NS+++T+ G I L ++ ++ + ++D
Sbjct 342 KQNKLMIQVEDHVIVHADYDRFIQILVNITKNSIQFTQ-NGDIWLRGMEGYKETIIEIED 400
Query 491 SPLGLNDEQLSRLGERFYRVDDSRTRST-GGTGLGLALSYKLAQALGGQLRFDHSPLGGL 549
+ +G+ E + + ERFY+ D SRT + G GLGL++ +L + G + G
Sbjct 401 TGIGIPKEDIEHIWERFYKADISRTNTAYGEYGLGLSIVRQLVEMHQGTVEIKSEEGKGT 460
Query 550 RCILTFPKT 558
+ I+ P T
Sbjct 461 KFIIRLPLT 469
>P23545 Alkaline phosphatase synthesis sensor protein PhoR [Bacillus
subtilis (strain 168)]
Length=579
Score = 118 bits (296), Expect = 3e-31
Identities = 67/208 (32%), Positives = 119/208 (57%), Gaps = 5/208 (2%)
Query 337 EESRRQWVADTSHELKTPLSVLQAQIEAMQDGI---RKATPEHLAAMMSQISSLKKLTQD 393
E+ R+ +VA+ SHELKTP++ ++ E + DG ++A E L+ ++ + L+ L QD
Sbjct 348 EQMRKDFVANVSHELKTPITSIKGFTETLLDGAMEDKEALSEFLSIILKESERLQSLVQD 407
Query 394 LADLAQADAQQLKCYFAEVDPWDVILQEVENFKPKIEQAQLSIVVEGAGTKLQLDID--R 451
L DL++ + Q +P ++ + K K ++ +S+ + + D R
Sbjct 408 LLDLSKIEQQNFTLSIETFEPAKMLGEIETLLKHKADEKGISLHLNVPKDPQYVSGDPYR 467
Query 452 FKQIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDDSPLGLNDEQLSRLGERFYRVD 511
KQ+ +NL++N++ YT GG + ++ E+ + V DS +G+ E++ R+ ERFYRVD
Sbjct 468 LKQVFLNLVNNALTYTPEGGSVAINVKPREKDIQIEVADSGIGIQKEEIPRIFERFYRVD 527
Query 512 DSRTRSTGGTGLGLALSYKLAQALGGQL 539
R+R++GGTGLGLA+ L +A G++
Sbjct 528 KDRSRNSGGTGLGLAIVKHLIEAHEGKI 555
Score = 29.3 bits (64), Expect = 0.006
Identities = 21/71 (30%), Positives = 35/71 (49%), Gaps = 15/71 (21%)
Query 276 ASLVAALLLATYF--------KKPIQRLLNATRELTRGRYQHQV---EIKRNDELG---- 320
ASL A ++ YF K+ I+ N EL++G Y + I+R+D+LG
Sbjct 157 ASLCTAFIVIVYFYSSMTSRYKRSIESATNVATELSKGNYDARTYGGYIRRSDKLGHAMN 216
Query 321 DLATELNQLAK 331
LA +L ++ +
Sbjct 217 SLAIDLMEMTR 227
>Q8CSL7 Signal transduction histidine-protein kinase ArlS [Staphylococcus
epidermidis (strain ATCC 12228 / FDA PCI 1200)]
Length=456
Score = 115 bits (287), Expect = 2e-30
Identities = 98/397 (25%), Positives = 194/397 (49%), Gaps = 45/397 (11%)
Query 182 EMANLMHHDGKKRFIAMPDRLGLSS--RLSLYDAKHQFIVGEYSNEQISY---------- 229
++ANL H A+ L + + +YD K + ++ ++ ++Y
Sbjct 52 DIANLFHSKSLSDISALDLNASLENFQEILIYDDKGRKLIQTSNDNTLAYDNKIDFKHPE 111
Query 230 RPIMVNDRVVGYLGL-KPVLDEDDA------LSINFFSNQKRFLLLIYL-FSVLASLVAA 281
R + + YL + +P+ +D + S+ + N + L ++ L F ++A+++ A
Sbjct 112 RIHIQRSHGINYLVITEPIRSKDFSGYSVLVHSLQNYDNLVKSLYIVALAFGLIATIITA 171
Query 282 ---LLLATYFKKPIQRLLNATRELTRGRYQHQVEIKRN-DELGDLATELNQLAKILYQHE 337
+ ++ KPI + N ++ R +Q+++E+ N +E +L N++ +YQ E
Sbjct 172 GVSYIFSSQITKPIVTMSNKMNQIRRDGFQNKLELTTNYEETDNLIDTFNEM---MYQIE 228
Query 338 ES---RRQWVADTSHELKTPLSVLQAQIEAMQDGIRK---ATPEHLAAMMSQISSLKKLT 391
ES +RQ+V D SHEL+TPL ++Q + +Q +K E L + +++ + KL
Sbjct 229 ESFNQQRQFVEDASHELRTPLQIIQGHLNLIQRWGKKDPAVLEESLNISIEEVNRITKLV 288
Query 392 QDLADLAQ--ADAQQLKCYFAEVDPWDVILQEVENFKPKIEQAQLSIVVEG--AGTKLQL 447
++L L + + L+C +V+ E+++ ++ E A +QL
Sbjct 289 EELLLLTKDRVNHNVLECENVDVN------SEIQSRVKSLQHLHPDYTFETHLATKPIQL 342
Query 448 DIDR--FKQIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDDSPLGLNDEQLSRLGE 505
I+R F+Q+++ + N+++Y IK+ T + + + D +G+ L + +
Sbjct 343 KINRHQFEQLLLIFIDNAMKYDTEHKHIKIVTQLKNKMIMIDITDHGMGIPKADLEFIFD 402
Query 506 RFYRVDDSRTRSTGGTGLGLALSYKLAQALGGQLRFD 542
RFYRVD SR RS GG GLGL+++ K+ Q GG ++ +
Sbjct 403 RFYRVDKSRARSQGGNGLGLSIAEKIVQLNGGMIQVE 439
>Q5HPC4 Signal transduction histidine-protein kinase ArlS [Staphylococcus
epidermidis (strain ATCC 35984 / RP62A)]
Length=456
Score = 113 bits (283), Expect = 6e-30
Identities = 82/305 (27%), Positives = 159/305 (52%), Gaps = 26/305 (9%)
Query 255 SINFFSNQKRFLLLIYL-FSVLASLVAA---LLLATYFKKPIQRLLNATRELTRGRYQHQ 310
S+ + N + L ++ L F ++A+++ A + ++ KPI + N ++ R +Q++
Sbjct 144 SLQNYDNLVKSLYIVALAFGLIATIITAGVSYIFSSQITKPIVTMSNKMNQIRRDGFQNK 203
Query 311 VEIKRN-DELGDLATELNQLAKILYQHEES---RRQWVADTSHELKTPLSVLQAQIEAMQ 366
+E+ N +E +L N++ +YQ EES +RQ+V D SHEL+TPL ++Q + +Q
Sbjct 204 LELTTNYEETDNLIDTFNEM---MYQIEESFNQQRQFVEDASHELRTPLQIIQGHLNLIQ 260
Query 367 DGIRK---ATPEHLAAMMSQISSLKKLTQDLADLAQ--ADAQQLKCYFAEVDPWDVILQE 421
+K E L + +++ + KL ++L L + + L+C +++ E
Sbjct 261 RWGKKDPAVLEESLNISIEEVNRITKLVEELLLLTKDRVNHNVLECENVDIN------SE 314
Query 422 VENFKPKIEQAQLSIVVEG--AGTKLQLDIDR--FKQIMVNLLSNSVRYTEAGGQIKLHT 477
+++ ++ E A +QL I+R F+Q+++ + N+++Y IK+ T
Sbjct 315 IQSRVKSLQHLHPDYTFETHLATKPIQLKINRHQFEQLLLIFIDNAMKYDTEHKHIKIVT 374
Query 478 LQDEEQWSVIVDDSPLGLNDEQLSRLGERFYRVDDSRTRSTGGTGLGLALSYKLAQALGG 537
+ + + D +G+ L + +RFYRVD SR RS GG GLGL+++ K+ Q GG
Sbjct 375 QLKNKMIMIDITDHGMGIPKADLEFIFDRFYRVDKSRARSQGGNGLGLSIAEKIVQLNGG 434
Query 538 QLRFD 542
++ +
Sbjct 435 MIQVE 439
>Q49XM6 Signal transduction histidine-protein kinase ArlS [Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC
15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)]
Length=451
Score = 112 bits (280), Expect = 1e-29
Identities = 78/293 (27%), Positives = 147/293 (50%), Gaps = 17/293 (6%)
Query 261 NQKRFLLLIYLFSVLASLVAALL---LATYFKKPIQRLLNATRELTRGRYQHQVEIKRN- 316
N F+ LI F V+A+ + A++ ++ KP+ + N +++ R +Q +VE+ N
Sbjct 152 NSLYFIALI--FGVIATFITAIISYFFSSQITKPLILMSNKMQQIRRDGFQEKVELSTNY 209
Query 317 DELGDLATELNQLAKILYQHEESRRQWVADTSHELKTPLSVLQAQIEAMQDGIRKATP-- 374
+E +L N++ L + +RQ+V D SHEL+TPL ++Q + + +K
Sbjct 210 EETDNLIVTFNEMMLQLEESFNQQRQFVEDASHELRTPLQIIQGHLNLINRWGKKDAAIL 269
Query 375 -EHLAAMMSQISSLKKLTQDLADLAQADAQQLKCYFAEVDPWDVILQEVENFKPKIEQAQ 433
E L + +++ + KL ++L L + + V+ I QE+ + + Q
Sbjct 270 EESLDISLEEMTRITKLVEELLLLTKDNNNSRDGEIENVE----INQEIASRIKSLSQLH 325
Query 434 LSIVVE--GAGTKLQLDIDR--FKQIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVD 489
E L + IDR F+Q+++ + N+++Y + I++ T +Q S+ +
Sbjct 326 SDYTFEFDAFPKPLNIKIDRYQFEQMLIIFIDNAMKYDQINKYIQIQTKLRNKQISIEIT 385
Query 490 DSPLGLNDEQLSRLGERFYRVDDSRTRSTGGTGLGLALSYKLAQALGGQLRFD 542
D +G+ E + + +RFYRVD SR+R GG GLGL+++ K+ + G + D
Sbjct 386 DHGVGIPKEDIEFIFDRFYRVDKSRSRKLGGNGLGLSIAKKIIELNNGTIHVD 438
>Q07737 Sensor protein ChvG [Agrobacterium fabrum (strain C58
/ ATCC 33970)]
Length=596
Score = 113 bits (282), Expect = 2e-29
Identities = 82/315 (26%), Positives = 166/315 (53%), Gaps = 22/315 (7%)
Query 266 LLLIYLFSVLASLVAALLLATYFKKPIQRLLNATRELTRG-RYQHQVE--IKRNDELGDL 322
++ ++ + L ++V +LLL++ P++RL A + RG R + ++ R DE+G+L
Sbjct 281 IMRVFGIATLVNIVLSLLLSSTIATPLRRLSAAAIRVRRGARTREEIPDFSARQDEIGNL 340
Query 323 ATELNQLAKILYQHEESRRQWVADTSHELKTPLSVLQAQIEAMQDGIRKATPEHLAAMM- 381
+ L ++ LY ++ + AD SHELK PL+ L++ +E + + + + L ++
Sbjct 341 SIALREMTTALYDRIDAIESFAADVSHELKNPLTSLRSAVETLPRAKTEESKQRLTEIIF 400
Query 382 SQISSLKKLTQDLADLAQADAQQLKCYFAEVDPWDVILQEVENFKPKIEQAQLSIVVE-- 439
+ L +L D++D ++ DA+ + + +D DV+++ + + +I + S+ ++
Sbjct 401 HDVRRLDRLISDISDASRLDAELARADASPLD-LDVLMKGLVDISRQISTKKKSVAIDYV 459
Query 440 ---GAGTKLQLDID----RFKQIMVNLLSNSVRY-TEAGGQIKLHTLQDEEQWSVIVDDS 491
AG K ++ R QI+ NL+ N+ + +E G+I + + +++ V V+D+
Sbjct 460 ADRKAGAKTSFVVNGHDLRIGQIVTNLIENARSFVSEESGRITVRLSRHKDRCIVQVEDN 519
Query 492 PLGLNDEQLSRLGERFYRVDDSRTRSTGGTGLGLALSYKLAQALGGQLRFD-----HSPL 546
G+ E + R+ ERFY + +GLGL++S ++A+A GG LR + + +
Sbjct 520 GPGIQAEDIDRIFERFYTDRPASEGFGQNSGLGLSISRQIAEAHGGSLRAENVVDKYGVI 579
Query 547 GGLRCILTFP--KTH 559
G R L+ P +TH
Sbjct 580 SGARFTLSLPAAETH 594
>Q45614 Sensor histidine kinase WalK [Bacillus subtilis (strain
168)]
Length=611
Score = 113 bits (282), Expect = 2e-29
Identities = 79/298 (27%), Positives = 149/298 (50%), Gaps = 27/298 (9%)
Query 286 TYFKKPIQRLLNATRELTRGRYQHQ-----VEIKRNDELGDLAT----------ELNQLA 330
T + PI LL T Q +EI+R+DEL L +++ L
Sbjct 302 TALEMPITSLLGLQENYTFEDLVEQQDSMLLEIERDDELTVLRVNFSVIQREHGKIDGLI 361
Query 331 KILY------QHEESRRQWVADTSHELKTPLSVLQAQIEAMQDGI---RKATPEHLAAMM 381
++Y + ++ RR++VA+ SHEL+TPL+ +++ +EA+ +G + P L
Sbjct 362 AVIYDVTEQEKMDQERREFVANVSHELRTPLTTMRSYLEALAEGAWENKDIAPRFLMVTQ 421
Query 382 SQISSLKKLTQDLADLAQADAQQLKCYFAEVDPWDVILQEVENFKPKIEQ-AQLSIVVEG 440
++ + +L DL L++ D++ + + + ++ F+ EQ + +
Sbjct 422 NETERMIRLVNDLLQLSKFDSKDYQFNREWIQIVRFMSLIIDRFEMTKEQHVEFIRNLPD 481
Query 441 AGTKLQLDIDRFKQIMVNLLSNSVRYTEAGGQI--KLHTLQDEEQWSVIVDDSPLGLNDE 498
+++D D+ Q++ N++SN+++Y+ GG + + ++EE + V D +G+ +
Sbjct 482 RDLYVEIDQDKITQVLDNIISNALKYSPEGGHVTFSIDVNEEEELLYISVKDEGIGIPKK 541
Query 499 QLSRLGERFYRVDDSRTRSTGGTGLGLALSYKLAQALGGQLRFDHSPLGGLRCILTFP 556
+ ++ +RFYRVD +RTR GGTGLGLA++ ++ QA GG + D G T P
Sbjct 542 DVEKVFDRFYRVDKARTRKLGGTGLGLAIAKEMVQAHGGDIWADSIEGKGTTITFTLP 599
Score = 39.7 bits (91), Expect = 4e-06
Identities = 31/111 (28%), Positives = 53/111 (48%), Gaps = 11/111 (10%)
Query 227 ISYRPIMV-NDRVVGYLGLKPVLDEDDALSINFFSNQKRFLLLIYLFSVLASLVAALL-- 283
IS +P+M N VVG + + +++ F+ K ++ + LA ++ ALL
Sbjct 148 ISAKPVMTENQEVVGAIYVVASMED-------VFNQMKTINTILASGTGLALVLTALLGI 200
Query 284 -LATYFKKPIQRLLNATRELTRGRYQHQVEIKRNDELGDLATELNQLAKIL 333
LA P+ + EL +G + +V+ +DE+G LAT N L + L
Sbjct 201 FLARTITHPLSDMRKQAMELAKGNFSRKVKKYGHDEIGQLATTFNHLTREL 251
>Q04943 Signal transduction histidine-protein kinase AfsQ2 [Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145)]
Length=535
Score = 111 bits (278), Expect = 5e-29
Identities = 86/310 (28%), Positives = 153/310 (49%), Gaps = 31/310 (10%)
Query 273 SVLASLVAALLLATYFKKPIQRLLNATRELTRGRYQHQVEIKRNDELGDLATELNQLAKI 332
++L S + A LAT KP+ RL A R L G+ ++ + DEL DL+ N A+
Sbjct 211 ALLGSALLAQALATTVLKPVHRLGVAARRLGEGKLDTRLRVSGTDELADLSRTFNSAAEN 270
Query 333 LYQ-------HEESRRQWVADTSHELKTPLSVLQAQIEAMQDGIRKA------------- 372
L + E++ R++VAD SHEL+TPL+ L A E +++ + A
Sbjct 271 LEKRVADMAGREQASRRFVADMSHELRTPLTALTAVTEVLEEELEYAGEGEGEGGSFDPM 330
Query 373 TPEHLAAMMSQISSLKKLTQDLADLAQADAQQLKCYFAEVDPWDVILQEVENFKPKIEQA 432
+ ++S+ L L ++L ++ + DA + +VD D I ++ +A
Sbjct 331 VEPAVRLVVSETRRLNDLVENLMEVTRFDAGTARLVLDDVDVADQITACID------ARA 384
Query 433 QLSIVVEGA--GTKLQLDIDRFKQIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDD 490
L V A G +LD R I+ NL+ N++++ G +++ + + + + V D
Sbjct 385 WLDAVDLDAERGVHARLDPRRLDVILANLIGNALKH--GGSPVRVSVARADHEIVIRVRD 442
Query 491 SPLGLNDEQLSRLGERFYRVDDSRTRSTGGTGLGLALSYKLAQALGGQLRFDHSPLGGLR 550
+ G+ ++ L + +RFY+ SR RS G+GLGL+++ + A GG++ +++P GG
Sbjct 443 NGPGIPEDVLPHVFDRFYKASASRPRSE-GSGLGLSIALENAHIHGGEITAENAPEGGAV 501
Query 551 CILTFPKTHS 560
L P+ S
Sbjct 502 FTLRLPQDPS 511
Score = 21.6 bits (44), Expect = 1.5
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 0/57 (0%)
Query 3 IRRVPIALRLFLTVLLTTLVITTLSLGVLHWTMQKNFAKYVADVEMQKLDHLITNLA 59
+R + LRL L L L + G+ +W ++ D ++ + + N A
Sbjct 23 LRFTSLRLRLVLVFGLVALTAAVSASGIAYWLNREAVLTRTQDAVLRDFEQEMQNRA 79
>Q9L523 Sensor protein SrrB [Staphylococcus aureus]
Length=583
Score = 110 bits (275), Expect = 1e-28
Identities = 66/226 (29%), Positives = 124/226 (55%), Gaps = 6/226 (3%)
Query 337 EESRRQWVADTSHELKTPLSVLQAQIEAMQDGI---RKATPEHLAAMMSQISSLKKLTQD 393
++ ++ ++A+ SHEL+TP+S+LQ E++ DGI E LA ++ + L +L +
Sbjct 357 DQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVNE 416
Query 394 LADLAQADAQQLKCYFAEVDPWDVILQEVE-NFKPKIEQAQLSIVVEGAGTKL-QLDIDR 451
L ++A+ DA+ L EV P +L +++ ++ + + L++ ++ D+DR
Sbjct 417 LLNVARMDAEGLSVN-KEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR 475
Query 452 FKQIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDDSPLGLNDEQLSRLGERFYRVD 511
Q++ NL+ N+ RYT+ G +I + ++E + + + D+ G+ E L ++ +RFY+VD
Sbjct 476 MDQVLTNLIDNASRYTKPGDEIAITCDENESEDILYIKDTGTGIAPEHLQQVFDRFYKVD 535
Query 512 DSRTRSTGGTGLGLALSYKLAQALGGQLRFDHSPLGGLRCILTFPK 557
+RTR GTGLGL + + + GG + G I+ PK
Sbjct 536 AARTRGKQGTGLGLFICKMIIEEHGGSIDVKSELGKGTTFIIKLPK 581
Score = 46.6 bits (109), Expect = 3e-08
Identities = 36/163 (22%), Positives = 70/163 (43%), Gaps = 25/163 (15%)
Query 241 YLGLKPVLDEDDALSINFFSNQKRFLLLIYLFSVLASLVAALLLATYFKKPIQRLLNATR 300
Y LK + D ++A++I FL + +F A L++ KP++RL +
Sbjct 160 YKDLKSIEDTNNAITIITIITAVIFLTITTVF--------AFFLSSRITKPLRRLRDQAT 211
Query 301 ELTRGRYQHQVEIKRNDELGDLATELNQLAKILYQHEESRRQWVADTSHELKTPLSVLQA 360
++ G Y ++ + DE+G L+ NQ++ + +H ++ L T ++ +
Sbjct 212 RVSEGDYSYKPSVTTKDEIGQLSQAFNQMSTEIEEHVDA-----------LSTSKNIRDS 260
Query 361 QIEAMQDGIRKATPEHLAAMMSQISSLKKLTQDLADLAQADAQ 403
I +M +G+ QI K+ D+ D DA+
Sbjct 261 LINSMVEGVLGINESR------QIILSNKMANDIMDNIDEDAK 297
Score = 21.9 bits (45), Expect = 1.2
Identities = 16/57 (28%), Positives = 26/57 (46%), Gaps = 4/57 (7%)
Query 110 NEQNMIMLSPSLANENRLKNRPILDEQERRFLQDNLPSEYQPFEGLKFPLNSNQNFF 166
NE I+LS +AN+ + N +DE + FL + ++ + L N FF
Sbjct 273 NESRQIILSNKMAND-IMDN---IDEDAKAFLLRQIEDTFKSKQTEMRDLEMNTRFF 325
>Q5HFT1 Sensor protein SrrB [Staphylococcus aureus (strain COL)]
Length=583
Score = 110 bits (275), Expect = 1e-28
Identities = 66/226 (29%), Positives = 124/226 (55%), Gaps = 6/226 (3%)
Query 337 EESRRQWVADTSHELKTPLSVLQAQIEAMQDGI---RKATPEHLAAMMSQISSLKKLTQD 393
++ ++ ++A+ SHEL+TP+S+LQ E++ DGI E LA ++ + L +L +
Sbjct 357 DQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVNE 416
Query 394 LADLAQADAQQLKCYFAEVDPWDVILQEVE-NFKPKIEQAQLSIVVEGAGTKL-QLDIDR 451
L ++A+ DA+ L EV P +L +++ ++ + + L++ ++ D+DR
Sbjct 417 LLNVARMDAEGLSVN-KEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR 475
Query 452 FKQIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDDSPLGLNDEQLSRLGERFYRVD 511
Q++ NL+ N+ RYT+ G +I + ++E + + + D+ G+ E L ++ +RFY+VD
Sbjct 476 MDQVLTNLIDNASRYTKPGDEIAITCDENESEDILYIKDTGTGIAPEHLQQVFDRFYKVD 535
Query 512 DSRTRSTGGTGLGLALSYKLAQALGGQLRFDHSPLGGLRCILTFPK 557
+RTR GTGLGL + + + GG + G I+ PK
Sbjct 536 AARTRGKQGTGLGLFICKMIIEEHGGSIDVKSELGKGTTFIIKLPK 581
Score = 46.6 bits (109), Expect = 3e-08
Identities = 36/163 (22%), Positives = 70/163 (43%), Gaps = 25/163 (15%)
Query 241 YLGLKPVLDEDDALSINFFSNQKRFLLLIYLFSVLASLVAALLLATYFKKPIQRLLNATR 300
Y LK + D ++A++I FL + +F A L++ KP++RL +
Sbjct 160 YKDLKSIEDTNNAITIITIITAVIFLTITTVF--------AFFLSSRITKPLRRLRDQAT 211
Query 301 ELTRGRYQHQVEIKRNDELGDLATELNQLAKILYQHEESRRQWVADTSHELKTPLSVLQA 360
++ G Y ++ + DE+G L+ NQ++ + +H ++ L T ++ +
Sbjct 212 RVSEGDYSYKPSVTTKDEIGQLSQAFNQMSTEIEEHVDA-----------LSTSKNIRDS 260
Query 361 QIEAMQDGIRKATPEHLAAMMSQISSLKKLTQDLADLAQADAQ 403
I +M +G+ QI K+ D+ D DA+
Sbjct 261 LINSMVEGVLGINESR------QIILSNKMANDIMDNIDEDAK 297
Score = 21.9 bits (45), Expect = 1.2
Identities = 16/57 (28%), Positives = 26/57 (46%), Gaps = 4/57 (7%)
Query 110 NEQNMIMLSPSLANENRLKNRPILDEQERRFLQDNLPSEYQPFEGLKFPLNSNQNFF 166
NE I+LS +AN+ + N +DE + FL + ++ + L N FF
Sbjct 273 NESRQIILSNKMAND-IMDN---IDEDAKAFLLRQIEDTFKSKQTEMRDLEMNARFF 325
>Q9ZHD4 Probable sensor kinase SilS [Salmonella typhimurium]
Length=497
Score = 108 bits (269), Expect = 5e-28
Identities = 91/326 (28%), Positives = 161/326 (49%), Gaps = 20/326 (6%)
Query 254 LSINFFSNQ----KRFLLLIYLFSVLASLVAALLLATYFKK---PIQRLLNATRELTRGR 306
LSINF + K+ L+ I +V+ SL+ L++ ++ P++ + NA + +T
Sbjct 172 LSINFHLHYLDALKKNLIAI---AVVISLLIVLIIRIAVRQGHLPLRNVSNAIKNITSEN 228
Query 307 YQHQVEIKRND-ELGDLATELNQLAKILYQHEESRRQWVADTSHELKTPLS--VLQAQIE 363
++E R EL L N + + + + AD +HE++TP++ V Q +I
Sbjct 229 LDARLEPTRVPIELEQLVISFNHMIGKIEDVFTRQANFSADIAHEIRTPITNLVTQTEIA 288
Query 364 AMQDGIRKATPEHLAAMMSQISSLKKLTQDLADLAQADAQQL-----KCYFAEVDPWDVI 418
QD +K + L + + + + + K+ D+ LAQAD QL + + V
Sbjct 289 LSQDRTQKELEDVLYSSLEEYNRMTKMVSDMLFLAQADNNQLIPDRVRFDLQSQNSLKVF 348
Query 419 LQEVENFKPKIEQAQLSIVVEGAGTKLQLDIDRFKQIMVNLLSNSVRYTEAGGQIKLHTL 478
E PK E L + G ++ D F++ + NLLSN++RYT G I +
Sbjct 349 RVFSEALGPK-ETPILLLKFNGMPCLVEGDPQMFRRAINNLLSNALRYTPEGQAITVSIR 407
Query 479 QDEEQWSVIVDDSPLGLNDEQLSRLGERFYRVDDSRTRSTGGTGLGLALSYKLAQALGGQ 538
+ E + +++++ + +E LSRL +RFYRVD SR R G+G+GLA+ + +A G+
Sbjct 408 EQESFFDLVIENPGKPIPEEHLSRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVEAHHGR 467
Query 539 LRFDHSPLGGLRCILTFPKTHSNIKE 564
++ + S + R IL+ P+ I +
Sbjct 468 VQVE-SDVHSTRFILSVPRLEKMIPD 492
Score = 24.6 bits (52), Expect = 0.17
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 6/62 (10%)
Query 2 KIRRVP--IALRLFLTVLLTTLVITTLSLGVLHWTMQKNFAKYVADVEMQKLDHLITNLA 59
K R+P +ALRL + L+T+ L+ W M + K+ A+ ++ L + T L+
Sbjct 4 KPSRLPFSLALRLTFFISLSTI----LAFIAFTWFMLHSVEKHFAEQDVSDLQQISTTLS 59
Query 60 NV 61
+
Sbjct 60 RI 61
>P23621 Phosphate regulon sensor protein PhoR [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=443
Score = 106 bits (264), Expect = 1e-27
Identities = 68/202 (34%), Positives = 107/202 (53%), Gaps = 10/202 (5%)
Query 333 LYQHEESRRQWVADTSHELKTPLSVLQAQIEAMQDGIRKATPEHLAA---MMSQISSLKK 389
++Q E+ R+ +VA+ SHEL+TPL+V+ +E + D + P L A M Q ++
Sbjct 203 VHQLEQMRKDFVANVSHELRTPLTVIAGYLETLLDNVEDVNPRWLRALQQMQQQAGRMQN 262
Query 390 LTQDLADLAQADAQQLKCYFAEVDPW--DVILQEVENFKPKIEQAQLSIVVEGAGTKLQL 447
L DL LA+ +A Y + P D +L + N + + + A +QL
Sbjct 263 LLNDLLLLAKLEATD---YPGDNKPVAVDALLASIRNDAQALSAGRNHRISLDAAPAVQL 319
Query 448 DIDR--FKQIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDDSPLGLNDEQLSRLGE 505
+ NL+ N+V+YT G+I++ DE+ + V D+ +G++ + L RL E
Sbjct 320 KGSEAELRSAFSNLVFNAVKYTPDEGEIRIRWWADEQGAHLSVQDTGIGVDPKHLPRLTE 379
Query 506 RFYRVDDSRTRSTGGTGLGLAL 527
RFYRVD SR +TGGTGLGLA+
Sbjct 380 RFYRVDSSRASNTGGTGLGLAI 401
>P0AE82 Sensor histidine kinase CpxA [Escherichia coli (strain
K12)]
Length=457
Score = 106 bits (264), Expect = 2e-27
Identities = 82/294 (28%), Positives = 145/294 (49%), Gaps = 10/294 (3%)
Query 267 LLIYLFSVLASLVAALLLATYFKKPIQRLLNATRELTRGRYQHQVEIKRN-DELGDLATE 325
LL+ + ++L S L LA KP ++L NA E+ +G + E++ E
Sbjct 165 LLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGAS 224
Query 326 LNQLAKILYQHEESRRQWVADTSHELKTPLSVLQAQIEAMQDGIRKATPEHLAAMMSQIS 385
NQ+ L + S+++ ++D SHEL+TPL+ LQ ++ R + L + ++
Sbjct 225 FNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRR--RSGESKELERIETEAQ 282
Query 386 SLKKLTQDLADLAQADAQQLKCYFAEVDPWDVILQEV-ENFKPKIEQAQLSIVVEGAGTK 444
L + DL L + QQ +E + + EV +N + EQ S+ V
Sbjct 283 RLDSMINDL--LVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGP 340
Query 445 LQL--DIDRFKQIMVNLLSNSVRYTEAGGQIKLHTLQDEEQWSVIVDDSPLGLNDEQLSR 502
L + + + + N++ N++RY+ +I++ D++ ++ VDD G++ E +
Sbjct 341 WPLYGNPNALESALENIVRNALRYSHT--KIEVGFAVDKDGITITVDDDGPGVSPEDREQ 398
Query 503 LGERFYRVDDSRTRSTGGTGLGLALSYKLAQALGGQLRFDHSPLGGLRCILTFP 556
+ FYR D++R R +GGTGLGLA+ Q G ++ + SPLGGLR ++ P
Sbjct 399 IFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLP 452
Lambda K H a alpha
0.321 0.137 0.397 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 4678230
Database: 4a7ebfc0bf316067cdc84ec618a69090.SwissProt.fasta
Posted date: May 31, 2024 8:13 AM
Number of letters in database: 10,349
Number of sequences in database: 21
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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