BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: cd1eb0919e3e34ac05b56387e203444e.SwissProt.fasta
21 sequences; 8,422 total letters
Query= ACIAD0636
Length=404
Score E
Sequences producing significant alignments: (Bits) Value
Q6FEF1 Tryptophan synthase beta chain [Acinetobacter baylyi (stra... 809 0.0
P16706 Tryptophan synthase beta chain [Acinetobacter calcoaceticus] 809 0.0
Q604P3 Tryptophan synthase beta chain [Methylococcus capsulatus (... 592 0.0
Q1H0M1 Tryptophan synthase beta chain [Methylobacillus flagellatu... 583 0.0
Q0AGX5 Tryptophan synthase beta chain [Nitrosomonas eutropha (str... 578 0.0
Q82WI2 Tryptophan synthase beta chain [Nitrosomonas europaea (str... 578 0.0
A2SHS4 Tryptophan synthase beta chain [Methylibium petroleiphilum... 575 0.0
Q47HQ5 Tryptophan synthase beta chain [Dechloromonas aromatica (s... 575 0.0
A5IBF7 Tryptophan synthase beta chain [Legionella pneumophila (st... 574 0.0
Q5WX32 Tryptophan synthase beta chain [Legionella pneumophila (st... 573 0.0
Q5X5Q2 Tryptophan synthase beta chain [Legionella pneumophila (st... 573 0.0
Q3SHL9 Tryptophan synthase beta chain [Thiobacillus denitrificans... 573 0.0
Q2KE82 Tryptophan synthase beta chain [Rhizobium etli (strain CFN... 534 0.0
P34817 Tryptophan synthase beta chain [Pseudomonas syringae pv. s... 531 0.0
P07345 Tryptophan synthase beta chain [Pseudomonas aeruginosa (st... 530 0.0
P12290 Tryptophan synthase beta chain [Caulobacter vibrioides (st... 522 0.0
Q84GJ9 Tryptophan synthase beta chain [Neisseria gonorrhoeae] 522 0.0
P11080 Tryptophan synthase beta chain [Pseudomonas putida] 513 0.0
P16609 Tryptophan synthase beta chain [Thermus thermophilus (stra... 511 0.0
Q8U093 Tryptophan synthase beta chain 1 [Pyrococcus furiosus (str... 508 0.0
Q9YGB0 Tryptophan synthase beta chain 1 [Thermococcus kodakarensi... 504 0.0
>Q6FEF1 Tryptophan synthase beta chain [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=403
Score = 809 bits (2090), Expect = 0.0
Identities = 402/403 (99%), Positives = 403/403 (100%), Gaps = 0/403 (0%)
Query 1 VIDYTQYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGR 60
+IDYTQYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGR
Sbjct 1 MIDYTQYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGR 60
Query 61 PSPLYYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQ 120
PSPLYYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQ
Sbjct 61 PSPLYYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQ 120
Query 121 HGVATATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAM 180
HGVATATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAM
Sbjct 121 HGVATATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAM 180
Query 181 RDWVTNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGG 240
RDWVTNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGG
Sbjct 181 RDWVTNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGG 240
Query 241 SNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQI 300
SNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQI
Sbjct 241 SNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQI 300
Query 301 IETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHA 360
IETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHA
Sbjct 301 IETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHA 360
Query 361 MAYVTKLAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMVEM 403
MAYVTKLAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMVEM
Sbjct 361 MAYVTKLAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMVEM 403
>P16706 Tryptophan synthase beta chain [Acinetobacter calcoaceticus]
Length=403
Score = 809 bits (2090), Expect = 0.0
Identities = 402/403 (99%), Positives = 403/403 (100%), Gaps = 0/403 (0%)
Query 1 VIDYTQYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGR 60
+IDYTQYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGR
Sbjct 1 MIDYTQYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGR 60
Query 61 PSPLYYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQ 120
PSPLYYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQ
Sbjct 61 PSPLYYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQ 120
Query 121 HGVATATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAM 180
HGVATATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAM
Sbjct 121 HGVATATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAM 180
Query 181 RDWVTNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGG 240
RDWVTNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGG
Sbjct 181 RDWVTNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGG 240
Query 241 SNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQI 300
SNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQI
Sbjct 241 SNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQI 300
Query 301 IETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHA 360
IETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHA
Sbjct 301 IETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHA 360
Query 361 MAYVTKLAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMVEM 403
MAYVTKLAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMVEM
Sbjct 361 MAYVTKLAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMVEM 403
>Q604P3 Tryptophan synthase beta chain [Methylococcus capsulatus
(strain ATCC 33009 / NCIMB 11132 / Bath)]
Length=405
Score = 592 bits (1527), Expect = 0.0
Identities = 284/391 (73%), Positives = 337/391 (86%), Gaps = 0/391 (0%)
Query 8 PDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLYYA 67
PD GHFG +GG FV+ETLM LE+L+ Y+R D +FLAE D DL +YVGRPSP+Y+A
Sbjct 13 PDELGHFGPYGGIFVAETLMEPLEELKAAYHRYLKDPEFLAELDHDLNHYVGRPSPIYHA 72
Query 68 ERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATAT 127
ER S++LGGAQI+ KREDLNHTG+HKVNNT+GQALLAK GK+R+IAETGAGQHGVATAT
Sbjct 73 ERLSRELGGAQIFFKREDLNHTGAHKVNNTVGQALLAKRMGKRRVIAETGAGQHGVATAT 132
Query 128 IAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVTNV 187
+AARLG+ECVV+MGA DV+RQA+NV+RM+LLGATVI V SGS+TLKDA+NEAMRDWVTNV
Sbjct 133 VAARLGMECVVYMGAVDVQRQALNVFRMKLLGATVIAVDSGSRTLKDALNEAMRDWVTNV 192
Query 188 DSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLF 247
D T+Y+IGTVAGPHPYP +VRDFQ++IGREARRQ+ E GRLPDALVACVGGGSNAIGLF
Sbjct 193 DDTFYIIGTVAGPHPYPAMVRDFQAVIGREARRQMLEMTGRLPDALVACVGGGSNAIGLF 252
Query 248 YPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHSIS 307
+PF++D++V MYGVEAAG GIETG+HSAPL+AG GVLHGNRTYLM D G+IIETHSIS
Sbjct 253 HPFVDDREVAMYGVEAAGDGIETGRHSAPLSAGRPGVLHGNRTYLMEDEDGEIIETHSIS 312
Query 308 AGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTKL 367
AGLDYPGVGPEH++LKD R YV D EAL+ F LTR EGIIPA+ES+HA+AY KL
Sbjct 313 AGLDYPGVGPEHAWLKDCGRASYVSATDAEALEAFHILTRSEGIIPALESSHAVAYALKL 372
Query 368 APTMDKDQIIIANVSGRGDKDLMTVARIDGI 398
APT+ D+I++ N+SGRGDKD+ T+A +GI
Sbjct 373 APTLSSDKIVLVNLSGRGDKDIHTIATREGI 403
Score = 18.1 bits (35), Expect = 10.0
Identities = 12/35 (34%), Positives = 17/35 (49%), Gaps = 0/35 (0%)
Query 367 LAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMV 401
LA M K ++I +G+ TVA G+E V
Sbjct 108 LAKRMGKRRVIAETGAGQHGVATATVAARLGMECV 142
>Q1H0M1 Tryptophan synthase beta chain [Methylobacillus flagellatus
(strain KT / ATCC 51484 / DSM 6875)]
Length=400
Score = 583 bits (1503), Expect = 0.0
Identities = 278/394 (71%), Positives = 338/394 (86%), Gaps = 1/394 (0%)
Query 8 PDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLYYA 67
PD RGHFG +GG FV+ETL+ ALE+L +Y R ++D FLAEF DL ++VGRPSP+YYA
Sbjct 7 PDKRGHFGPYGGIFVAETLVEALEELRVMYERYRHDPDFLAEFAYDLKHFVGRPSPVYYA 66
Query 68 ERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATAT 127
ER ++K GGA+IYLKREDLNHTG+HKVNNTIGQALLAK GK R+IAETGAGQHGVATAT
Sbjct 67 ERLTQKAGGARIYLKREDLNHTGAHKVNNTIGQALLAKRMGKPRVIAETGAGQHGVATAT 126
Query 128 IAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVTNV 187
IAARLGLECVV+MGAEDVKRQA NV+RM+LLGATV+PV+SGSKTLKDA+NEAMRDWVTN+
Sbjct 127 IAARLGLECVVYMGAEDVKRQAPNVFRMKLLGATVVPVESGSKTLKDALNEAMRDWVTNI 186
Query 188 DSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLF 247
+T+Y+IGTVAGPHPYP +VRDFQ++IG EA++Q+QE GR PDA++ACVGGGSNA+G+F
Sbjct 187 SNTFYIIGTVAGPHPYPMMVRDFQAVIGTEAKQQMQELIGRQPDAVIACVGGGSNAMGIF 246
Query 248 YPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGH-VGVLHGNRTYLMSDPQGQIIETHSI 306
YP+++ + V++ GVEAAGHGI+TG+H+APL A GVLHGNRTYLM D GQIIETHSI
Sbjct 247 YPYIDVEGVRLIGVEAAGHGIDTGRHAAPLTANSPAGVLHGNRTYLMQDENGQIIETHSI 306
Query 307 SAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTK 366
SAGLDYPGVGPEH++LKD+ R EYV + D+EA++ F L R EGIIPA+ES+HA+AY K
Sbjct 307 SAGLDYPGVGPEHAWLKDIKRAEYVAVTDDEAMEAFHTLCRTEGIIPALESSHALAYAMK 366
Query 367 LAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEM 400
LA TM DQ ++ N+SGRGDKD+ TVA + GI +
Sbjct 367 LAETMSPDQALLVNLSGRGDKDINTVASLAGITL 400
Score = 18.5 bits (36), Expect = 7.5
Identities = 11/35 (31%), Positives = 17/35 (49%), Gaps = 0/35 (0%)
Query 367 LAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMV 401
LA M K ++I +G+ T+A G+E V
Sbjct 102 LAKRMGKPRVIAETGAGQHGVATATIAARLGLECV 136
>Q0AGX5 Tryptophan synthase beta chain [Nitrosomonas eutropha
(strain DSM 101675 / C91 / Nm57)]
Length=399
Score = 578 bits (1491), Expect = 0.0
Identities = 275/393 (70%), Positives = 331/393 (84%), Gaps = 0/393 (0%)
Query 8 PDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLYYA 67
PD RGHFG +GG FV+ETL++AL++L Y + D +F EF R+L +YVGRPSP+Y+A
Sbjct 7 PDKRGHFGPYGGTFVAETLISALDELCKQYEYYRGDAEFQTEFFRELKHYVGRPSPIYHA 66
Query 68 ERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATAT 127
RWS LGGAQI LKREDLNHTG+HK+NNT+GQALLA+ GK RIIAETGAGQHGVA+AT
Sbjct 67 RRWSDHLGGAQILLKREDLNHTGAHKINNTVGQALLARRMGKSRIIAETGAGQHGVASAT 126
Query 128 IAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVTNV 187
+AAR G+ECVV+MG+EDVKRQA NVYRM+LLGATVIPV SGS+TLKDA+NEAMRDWVTNV
Sbjct 127 VAARYGMECVVYMGSEDVKRQATNVYRMKLLGATVIPVDSGSRTLKDALNEAMRDWVTNV 186
Query 188 DSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLF 247
+TYY+IGTVAGPHPYP +VRDFQ++IG EAR+Q+QE+ GR PDAL+ACVGGGSNAIGLF
Sbjct 187 GNTYYIIGTVAGPHPYPMMVRDFQAVIGNEARQQMQEEYGRQPDALIACVGGGSNAIGLF 246
Query 248 YPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHSIS 307
YP++ +++V+M GVEAAG GI+T KH+A L G GVLHGNRTYL+ D GQIIETHSIS
Sbjct 247 YPYIGEENVRMIGVEAAGKGIDTQKHAATLVTGRPGVLHGNRTYLIQDENGQIIETHSIS 306
Query 308 AGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTKL 367
AGLDYPGVGPEH++LKD R EYV I D EAL F L R EGI+PA+ES+HA+AY KL
Sbjct 307 AGLDYPGVGPEHAWLKDCGRAEYVAITDGEALAAFHALCRFEGIMPALESSHALAYAAKL 366
Query 368 APTMDKDQIIIANVSGRGDKDLMTVARIDGIEM 400
APT+ KDQ+++ N+SGRGDKD+ TVA+ GI +
Sbjct 367 APTLRKDQLLLVNLSGRGDKDMATVAQQSGISL 399
Score = 18.9 bits (37), Expect = 5.7
Identities = 13/35 (37%), Positives = 17/35 (49%), Gaps = 0/35 (0%)
Query 367 LAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMV 401
LA M K +II +G+ TVA G+E V
Sbjct 102 LARRMGKSRIIAETGAGQHGVASATVAARYGMECV 136
>Q82WI2 Tryptophan synthase beta chain [Nitrosomonas europaea
(strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)]
Length=397
Score = 578 bits (1489), Expect = 0.0
Identities = 275/393 (70%), Positives = 336/393 (85%), Gaps = 0/393 (0%)
Query 8 PDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLYYA 67
PD RGHFG +GG FV+ETL++AL++L Y ++D +F AEF +L +YVGRPSP+Y+A
Sbjct 5 PDKRGHFGPYGGTFVAETLISALDELCKQYEYYRDDAEFQAEFFHELKHYVGRPSPIYHA 64
Query 68 ERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATAT 127
+RWS+ LGGAQI LKREDLNHTG+HKVNNT+GQALLA+ GK RIIAETGAGQHGVA+AT
Sbjct 65 KRWSEHLGGAQILLKREDLNHTGAHKVNNTVGQALLARRMGKGRIIAETGAGQHGVASAT 124
Query 128 IAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVTNV 187
+AAR G+ECVV+MG+EDVKRQA NVYRM+LLGATVIPV SGS TLKDA+NEAMRDWVTNV
Sbjct 125 VAARYGMECVVYMGSEDVKRQATNVYRMKLLGATVIPVDSGSCTLKDALNEAMRDWVTNV 184
Query 188 DSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLF 247
+TYY+IGTVAGPHPYP +VRDFQ+IIG EAR+Q++E+ GR PDAL+ACVGGGSNAIGLF
Sbjct 185 SNTYYIIGTVAGPHPYPMMVRDFQAIIGNEARQQMREEYGRQPDALIACVGGGSNAIGLF 244
Query 248 YPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHSIS 307
YP++++++V+M GVEAAG GI+T +H+A L G GVLHGNRTYL+ D GQIIETHSIS
Sbjct 245 YPYIDEENVRMIGVEAAGKGIDTHEHAATLVTGRPGVLHGNRTYLIQDENGQIIETHSIS 304
Query 308 AGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTKL 367
AGLDYPGVGPEH++LKD R EYV + D+EAL F L R EGIIPA+ES+HA+AY KL
Sbjct 305 AGLDYPGVGPEHAWLKDCGRAEYVAVTDDEALAAFHALCRFEGIIPALESSHALAYAAKL 364
Query 368 APTMDKDQIIIANVSGRGDKDLMTVARIDGIEM 400
APT++KDQ+++ N+SGRGDKD+ TVA+ GI +
Sbjct 365 APTLNKDQLLLVNLSGRGDKDMATVAQQSGISL 397
Score = 18.5 bits (36), Expect = 7.5
Identities = 13/35 (37%), Positives = 17/35 (49%), Gaps = 0/35 (0%)
Query 367 LAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMV 401
LA M K +II +G+ TVA G+E V
Sbjct 100 LARRMGKGRIIAETGAGQHGVASATVAARYGMECV 134
>A2SHS4 Tryptophan synthase beta chain [Methylibium petroleiphilum
(strain ATCC BAA-1232 / LMG 22953 / PM1)]
Length=412
Score = 575 bits (1483), Expect = 0.0
Identities = 272/397 (69%), Positives = 336/397 (85%), Gaps = 0/397 (0%)
Query 6 QYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLY 65
Q PDA GHFG +GG FV+ETL+ AL++L+ Y R ++D +F+AEF +LA++VGRPSP+Y
Sbjct 5 QQPDASGHFGRYGGSFVAETLIHALDELKAAYARYRDDPEFVAEFKSELAHFVGRPSPIY 64
Query 66 YAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVAT 125
+A R S++LGGAQIYLKREDLNHTG+HK+NNTIGQALLA+ GK R+IAETGAGQHGVAT
Sbjct 65 HAARMSRELGGAQIYLKREDLNHTGAHKINNTIGQALLARRMGKPRVIAETGAGQHGVAT 124
Query 126 ATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVT 185
ATI AR G+ECVV+MG+EDVKRQ+ NVYRM LLGA V+PV SGSKTLKDA+NEA+RDWVT
Sbjct 125 ATICARYGMECVVYMGSEDVKRQSPNVYRMHLLGARVVPVDSGSKTLKDALNEALRDWVT 184
Query 186 NVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIG 245
NV++T+Y+IGTVAGP PYP++VRDFQS+IG E RQ+ E AGR PDA++ACVGGGSNA+G
Sbjct 185 NVENTFYIIGTVAGPAPYPEMVRDFQSVIGEECLRQMPEMAGRQPDAVIACVGGGSNAMG 244
Query 246 LFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHS 305
+FYP++ + V++ GVEAAGHG+++GKH+A L+AG GVLHGNRTYL+ D GQIIETHS
Sbjct 245 IFYPYIRHEGVRLIGVEAAGHGLDSGKHAASLSAGSPGVLHGNRTYLLQDANGQIIETHS 304
Query 306 ISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVT 365
ISAGLDYPGVGPEH++LKD+ R EYV I D+EALQ F L R EGIIPA+ES+HA+AY
Sbjct 305 ISAGLDYPGVGPEHAYLKDIGRAEYVGITDDEALQAFHRLCRTEGIIPALESSHAVAYAM 364
Query 366 KLAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMVE 402
KLAPTM DQ ++ N+SGRGDKD+ TVA + G E +
Sbjct 365 KLAPTMRSDQSLLVNLSGRGDKDIGTVADLSGAEFYD 401
>Q47HQ5 Tryptophan synthase beta chain [Dechloromonas aromatica
(strain RCB)]
Length=399
Score = 575 bits (1483), Expect = 0.0
Identities = 271/392 (69%), Positives = 331/392 (84%), Gaps = 0/392 (0%)
Query 7 YPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLYY 66
+PDA+GHFG +GG FV+ETL AL++L+ Y + D F AE++ +L ++VGRPSP+Y+
Sbjct 6 FPDAKGHFGPYGGVFVAETLFGALDELKEAYAAAQADPAFRAEYEYELKHFVGRPSPIYH 65
Query 67 AERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATA 126
A+RWS+ LGGAQIYLKREDLNHTG+HKVNN IGQA+LAK GK R+IAETGAGQHGVATA
Sbjct 66 AKRWSEMLGGAQIYLKREDLNHTGAHKVNNCIGQAMLAKRMGKPRVIAETGAGQHGVATA 125
Query 127 TIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVTN 186
T+AAR G+ECVV+MG+EDVKRQA NVYRM+LLGATV+PV+SGSKTLKDA+NEAMRDWVTN
Sbjct 126 TVAARYGMECVVYMGSEDVKRQAANVYRMKLLGATVVPVESGSKTLKDALNEAMRDWVTN 185
Query 187 VDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGL 246
+ +T+Y+IGTVAGPHPYP LVRDFQ IIG E Q+ E GR PDA++ACVGGGSNA+G+
Sbjct 186 IHNTFYIIGTVAGPHPYPMLVRDFQKIIGEECLVQMPEMTGRQPDAVIACVGGGSNAMGI 245
Query 247 FYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHSI 306
FYP++N + V++ GVEAAG G+ETG+HSA L AG GVLHGNRTYL+ D GQIIETHS+
Sbjct 246 FYPYINVEGVRLIGVEAAGDGMETGRHSASLTAGVPGVLHGNRTYLLQDEDGQIIETHSV 305
Query 307 SAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTK 366
SAGLDYPGVGPEH++LKD+ R EY P+ D+EAL F L RIEGIIPA+ES+HA+AY K
Sbjct 306 SAGLDYPGVGPEHAWLKDLGRAEYQPVTDSEALAAFHTLCRIEGIIPALESSHALAYAAK 365
Query 367 LAPTMDKDQIIIANVSGRGDKDLMTVARIDGI 398
LAPT+ KD+I++ N+SGRGDKD+ TVA GI
Sbjct 366 LAPTLAKDKILLVNLSGRGDKDMHTVAEKSGI 397
Score = 18.9 bits (37), Expect = 5.7
Identities = 12/35 (34%), Positives = 17/35 (49%), Gaps = 0/35 (0%)
Query 367 LAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMV 401
LA M K ++I +G+ TVA G+E V
Sbjct 102 LAKRMGKPRVIAETGAGQHGVATATVAARYGMECV 136
>A5IBF7 Tryptophan synthase beta chain [Legionella pneumophila
(strain Corby)]
Length=399
Score = 574 bits (1480), Expect = 0.0
Identities = 277/393 (70%), Positives = 331/393 (84%), Gaps = 0/393 (0%)
Query 6 QYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLY 65
+ PD GHFG +GG FV++TL++AL+ LE+ Y + +ND+ FL+E +L YVGRP+PLY
Sbjct 5 ELPDEFGHFGPYGGMFVADTLVSALKQLEHAYTKYRNDQDFLSELHTELKDYVGRPNPLY 64
Query 66 YAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVAT 125
+A SKK+GGAQIYLKREDLNHTG+HK+NNTIGQALLAK GK R+IAETGAGQHGVAT
Sbjct 65 HAVHLSKKIGGAQIYLKREDLNHTGAHKINNTIGQALLAKRMGKTRVIAETGAGQHGVAT 124
Query 126 ATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVT 185
AT+AA+ G +CVV+MG+ED+KRQ+ NVYRM+LLGA V+PV SGSKTLKDA+NEA+RDWV+
Sbjct 125 ATVAAKFGFQCVVYMGSEDIKRQSSNVYRMKLLGAEVVPVTSGSKTLKDALNEALRDWVS 184
Query 186 NVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIG 245
+VD T+Y+IGTVAGPHPYPQ+VRDFQ+IIG EAR Q E+ GRLPDALVACVGGGSNAIG
Sbjct 185 HVDDTFYIIGTVAGPHPYPQMVRDFQAIIGVEARAQHMEKTGRLPDALVACVGGGSNAIG 244
Query 246 LFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHS 305
LFYPFLNDQ V +YGVEA G GIETG+HSA L AG GVLHGNRTYL+ D GQ+ +THS
Sbjct 245 LFYPFLNDQSVMIYGVEAGGKGIETGEHSASLIAGKPGVLHGNRTYLLCDEYGQVKDTHS 304
Query 306 ISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVT 365
+SAGLDYPGVGPEH++LKD RV Y I+D+EAL FR LT EGIIPA+ES+HA+AY
Sbjct 305 VSAGLDYPGVGPEHAYLKDTGRVIYKAINDSEALDAFRLLTHTEGIIPALESSHAVAYAI 364
Query 366 KLAPTMDKDQIIIANVSGRGDKDLMTVARIDGI 398
+LA TM K+Q II N+SGRGDKD+ TVA IDGI
Sbjct 365 QLAKTMSKEQSIIVNLSGRGDKDMHTVAAIDGI 397
>Q5WX32 Tryptophan synthase beta chain [Legionella pneumophila
(strain Lens)]
Length=399
Score = 573 bits (1477), Expect = 0.0
Identities = 277/393 (70%), Positives = 330/393 (84%), Gaps = 0/393 (0%)
Query 6 QYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLY 65
+ PD GHFG +GG FV++TL+ AL+ LE+ Y + +ND+ FL+E +L YVGRP+PLY
Sbjct 5 ELPDEFGHFGPYGGMFVADTLVHALKQLEHAYTKYRNDQDFLSELHTELKDYVGRPNPLY 64
Query 66 YAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVAT 125
+A SKK+GGAQIYLKREDLNHTG+HK+NNTIGQALLAK GK R+IAETGAGQHGVAT
Sbjct 65 HAVHLSKKIGGAQIYLKREDLNHTGAHKINNTIGQALLAKRMGKTRVIAETGAGQHGVAT 124
Query 126 ATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVT 185
AT+AA+ G +CVV+MG+ED+KRQ+ NVYRM+LLGA V+PV SGSKTLKDA+NEA+RDWV+
Sbjct 125 ATVAAKFGFQCVVYMGSEDIKRQSSNVYRMKLLGAEVVPVTSGSKTLKDALNEALRDWVS 184
Query 186 NVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIG 245
+VD T+Y+IGTVAGPHPYPQ+VRDFQ+IIG EAR Q E+ GRLPDALVACVGGGSNAIG
Sbjct 185 HVDDTFYIIGTVAGPHPYPQMVRDFQAIIGVEARAQHMEKTGRLPDALVACVGGGSNAIG 244
Query 246 LFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHS 305
LFYPFLNDQ V +YGVEA G GIETG+HSA L AG GVLHGNRTYL+ D GQ+ +THS
Sbjct 245 LFYPFLNDQSVMIYGVEAGGKGIETGEHSASLIAGKPGVLHGNRTYLLCDEYGQVKDTHS 304
Query 306 ISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVT 365
+SAGLDYPGVGPEH++LKD RV Y I+D+EAL FR LT EGIIPA+ES+HA+AY
Sbjct 305 VSAGLDYPGVGPEHAYLKDTGRVIYKAINDSEALDAFRLLTHTEGIIPALESSHAVAYAI 364
Query 366 KLAPTMDKDQIIIANVSGRGDKDLMTVARIDGI 398
+LA TM K+Q II N+SGRGDKD+ TVA IDGI
Sbjct 365 QLAKTMSKEQSIIVNLSGRGDKDMHTVAAIDGI 397
>Q5X5Q2 Tryptophan synthase beta chain [Legionella pneumophila
(strain Paris)]
Length=399
Score = 573 bits (1477), Expect = 0.0
Identities = 277/393 (70%), Positives = 330/393 (84%), Gaps = 0/393 (0%)
Query 6 QYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLY 65
+ PD GHFG +GG FV++TL+ AL+ LE+ Y + +ND+ FL+E +L YVGRP+PLY
Sbjct 5 ELPDEFGHFGPYGGMFVADTLVHALKQLEHAYTKYRNDQDFLSELHTELKDYVGRPNPLY 64
Query 66 YAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVAT 125
+A SKK+GGAQIYLKREDLNHTG+HK+NNTIGQALLAK GK R+IAETGAGQHGVAT
Sbjct 65 HAVHLSKKIGGAQIYLKREDLNHTGAHKINNTIGQALLAKRMGKTRVIAETGAGQHGVAT 124
Query 126 ATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVT 185
AT+AA+ G +CVV+MG+ED+KRQ+ NVYRM+LLGA V+PV SGSKTLKDA+NEA+RDWV+
Sbjct 125 ATVAAKFGFQCVVYMGSEDIKRQSSNVYRMKLLGAEVVPVTSGSKTLKDALNEALRDWVS 184
Query 186 NVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIG 245
+VD T+Y+IGTVAGPHPYPQ+VRDFQ+IIG EAR Q E+ GRLPDALVACVGGGSNAIG
Sbjct 185 HVDDTFYIIGTVAGPHPYPQMVRDFQAIIGVEARAQHMEKTGRLPDALVACVGGGSNAIG 244
Query 246 LFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHS 305
LFYPFLNDQ V +YGVEA G GIETG+HSA L AG GVLHGNRTYL+ D GQ+ +THS
Sbjct 245 LFYPFLNDQSVMIYGVEAGGKGIETGEHSASLIAGKPGVLHGNRTYLLCDEYGQVKDTHS 304
Query 306 ISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVT 365
+SAGLDYPGVGPEH++LKD RV Y I+D+EAL FR LT EGIIPA+ES+HA+AY
Sbjct 305 VSAGLDYPGVGPEHAYLKDTGRVIYKAINDSEALDAFRLLTHTEGIIPALESSHAVAYAI 364
Query 366 KLAPTMDKDQIIIANVSGRGDKDLMTVARIDGI 398
+LA TM K+Q II N+SGRGDKD+ TVA IDGI
Sbjct 365 QLAKTMSKEQSIIVNLSGRGDKDMHTVAAIDGI 397
>Q3SHL9 Tryptophan synthase beta chain [Thiobacillus denitrificans
(strain ATCC 25259)]
Length=399
Score = 573 bits (1476), Expect = 0.0
Identities = 275/396 (69%), Positives = 331/396 (84%), Gaps = 0/396 (0%)
Query 5 TQYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPL 64
T PD+RGHFG +GG FVSETLMAAL+ L Y+ D F+AEF+ +L +YVGRPSP+
Sbjct 4 TDLPDSRGHFGPYGGIFVSETLMAALDALRVEYDAACRDPGFMAEFEYELKHYVGRPSPV 63
Query 65 YYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVA 124
Y+A R S++ GGAQIYLKREDLNHTG+HK+NNTIGQALLA+ GKKR+IAETGAGQHGVA
Sbjct 64 YHARRLSEEYGGAQIYLKREDLNHTGAHKINNTIGQALLARRMGKKRVIAETGAGQHGVA 123
Query 125 TATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWV 184
+AT+AAR G+ECVV+MGAEDV RQA NV+RM+LLGATV+PV SGSKTLKDA+NEAMRDWV
Sbjct 124 SATVAARYGMECVVYMGAEDVARQAPNVFRMKLLGATVVPVSSGSKTLKDALNEAMRDWV 183
Query 185 TNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAI 244
TNV+ST+Y++GT AGPHPYP LVRDFQ +IGRE Q+ E GR PDA+VACVGGGSNAI
Sbjct 184 TNVESTFYILGTAAGPHPYPMLVRDFQCVIGRECIAQMPELVGRQPDAVVACVGGGSNAI 243
Query 245 GLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETH 304
G+F+P++ ++V++ GVEA G G+ +GKH+APL AG GVLHG R+YLM D GQIIETH
Sbjct 244 GIFHPYIPHENVRLIGVEAGGSGVASGKHAAPLTAGTPGVLHGFRSYLMQDENGQIIETH 303
Query 305 SISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYV 364
S+SAGLDYPGVGPEHS+LKD R EYVPI+D+EAL F DL R EGIIPA+ES+HA+A
Sbjct 304 SVSAGLDYPGVGPEHSYLKDAGRAEYVPINDDEALAAFHDLCRFEGIIPALESSHAVAQA 363
Query 365 TKLAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEM 400
KLAPTM KDQ+I+ N+SGRGDKD+ TVA+ GI +
Sbjct 364 KKLAPTMKKDQVILVNLSGRGDKDINTVAKAAGITL 399
Score = 18.1 bits (35), Expect = 9.9
Identities = 12/35 (34%), Positives = 17/35 (49%), Gaps = 0/35 (0%)
Query 367 LAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMV 401
LA M K ++I +G+ TVA G+E V
Sbjct 102 LARRMGKKRVIAETGAGQHGVASATVAARYGMECV 136
>Q2KE82 Tryptophan synthase beta chain [Rhizobium etli (strain
CFN 42 / ATCC 51251)]
Length=406
Score = 534 bits (1375), Expect = 0.0
Identities = 260/391 (66%), Positives = 318/391 (81%), Gaps = 0/391 (0%)
Query 8 PDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLYYA 67
PD G FGI+GGRFV+ETLM + DL++ +N+ K+D F AE A+Y+GRPSPLY+A
Sbjct 14 PDEDGRFGIYGGRFVAETLMPLILDLQDEWNKAKSDPAFQAELKHLGAHYIGRPSPLYFA 73
Query 68 ERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATAT 127
ER + +LGGA+IY KRE+LNHTGSHK+NN IGQ LLAK GK RIIAETGAGQHGVA+AT
Sbjct 74 ERLTAELGGAKIYFKREELNHTGSHKINNCIGQILLAKRMGKTRIIAETGAGQHGVASAT 133
Query 128 IAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVTNV 187
+AAR GL CVV+MGA DV+RQA NV+RM+LLGA V PV +GS TLKDAMNEA+RDWVTNV
Sbjct 134 VAARFGLPCVVYMGATDVERQAPNVFRMKLLGAEVKPVTAGSGTLKDAMNEALRDWVTNV 193
Query 188 DSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLF 247
+ TYY+IGT AGPHPYP++VRDFQS+IG EA+ Q+ GRLPD +VA VGGGSNAIG+F
Sbjct 194 EDTYYLIGTAAGPHPYPEMVRDFQSVIGAEAKEQMLAAEGRLPDLVVAAVGGGSNAIGIF 253
Query 248 YPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHSIS 307
+PFL+D VK+ GVEA G G++ +H A + AG GVLHGNRTYL+ D GQI E HSIS
Sbjct 254 HPFLDDSSVKIVGVEAGGKGLQGDEHCASITAGSPGVLHGNRTYLLQDGDGQIKEGHSIS 313
Query 308 AGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTKL 367
AGLDYPG+GPEHS+L D+ RV+YVPI D+EAL+ F+ LTR+EGIIPA+E+AHA+A V K
Sbjct 314 AGLDYPGIGPEHSWLSDIGRVDYVPIMDHEALEAFQTLTRLEGIIPALEAAHAIAEVIKR 373
Query 368 APTMDKDQIIIANVSGRGDKDLMTVARIDGI 398
AP M KD+II+ N+SGRGDKD+ TV +I G+
Sbjct 374 APKMGKDEIILMNLSGRGDKDIFTVGKILGM 404
>P34817 Tryptophan synthase beta chain [Pseudomonas syringae pv.
syringae]
Length=408
Score = 531 bits (1367), Expect = 0.0
Identities = 257/393 (65%), Positives = 315/393 (80%), Gaps = 6/393 (2%)
Query 3 DYTQYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQF---LAEFDRDLAYYVG 59
D PDA G FG GGR+V+ETLM + DL Y K D F LA F RD YVG
Sbjct 7 DLRNGPDATGMFGAFGGRYVAETLMPLILDLAREYEAAKEDPAFKEELAYFQRD---YVG 63
Query 60 RPSPLYYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAG 119
RPSPLY+AER ++ GGA+IYLKRE+LNHTG+HK+NN IGQ LLA+ GKKRIIAETGAG
Sbjct 64 RPSPLYFAERLTEFCGGAKIYLKREELNHTGAHKINNCIGQILLARRMGKKRIIAETGAG 123
Query 120 QHGVATATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEA 179
HGVATAT+AAR GL+CV++MG D++RQ NV+RM+LLGA VIPV +G+ TLKDAMNEA
Sbjct 124 MHGVATATVAARFGLQCVIYMGTTDIERQQANVFRMKLLGAEVIPVVAGTGTLKDAMNEA 183
Query 180 MRDWVTNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGG 239
+RDWVTNV+ T+Y+IGTVAGPHPYP +VRDFQ++IG+E R Q+Q Q GRLPD+LVAC+GG
Sbjct 184 LRDWVTNVEDTFYLIGTVAGPHPYPAMVRDFQAVIGKETRDQLQAQEGRLPDSLVACIGG 243
Query 240 GSNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQ 299
GSNA+GLF+PFL+D+ V++ GVEAAGHGIETGKH+A LN G GVLHGNRT+L+ D GQ
Sbjct 244 GSNAMGLFHPFLDDKSVEIIGVEAAGHGIETGKHAASLNGGVPGVLHGNRTFLLQDDDGQ 303
Query 300 IIETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAH 359
II+ HSISAGLDYPG+GPEH++L D+ RV+Y + D+EAL F R+EGIIPA+ESAH
Sbjct 304 IIDAHSISAGLDYPGIGPEHAWLHDIGRVQYTSVTDDEALDAFHKCCRLEGIIPALESAH 363
Query 360 AMAYVTKLAPTMDKDQIIIANVSGRGDKDLMTV 392
A+A V K APT+ KD +++ N+SGRGDKD+ TV
Sbjct 364 ALAEVFKRAPTLPKDHLMVVNLSGRGDKDMQTV 396
>P07345 Tryptophan synthase beta chain [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG
12228 / 1C / PRS 101 / PAO1)]
Length=402
Score = 530 bits (1365), Expect = 0.0
Identities = 256/392 (65%), Positives = 317/392 (81%), Gaps = 6/392 (2%)
Query 4 YTQYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQF---LAEFDRDLAYYVGR 60
Y PDA+G FG GG++V+ETLM + DL Y + K+D F LA F RD YVGR
Sbjct 4 YRNGPDAKGLFGRFGGQYVAETLMPLILDLAREYEKAKDDPAFQEELAYFQRD---YVGR 60
Query 61 PSPLYYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQ 120
PSPLY+AER ++ GGA+IYLKRE+LNHTG+HK+NN IGQ LLA+ GKKRIIAETGAG
Sbjct 61 PSPLYFAERLTEHCGGAKIYLKREELNHTGAHKINNCIGQILLARRMGKKRIIAETGAGM 120
Query 121 HGVATATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAM 180
HGVATAT+AAR GL+CV++MG D+ RQ NV+RM+LLGA VIPV +G+ TLKDAMNEA+
Sbjct 121 HGVATATVAARFGLQCVIYMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLKDAMNEAL 180
Query 181 RDWVTNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGG 240
RDWVTNVDST+Y+IGTVAGPHPYP +VRDFQ++IG+E R Q+ E+ GRLPD+LVAC+GGG
Sbjct 181 RDWVTNVDSTFYLIGTVAGPHPYPAMVRDFQAVIGKETREQLAEKEGRLPDSLVACIGGG 240
Query 241 SNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQI 300
SNA+GLF+PFL+D V++ GVEAAGHGI+TGKH+A LN G GVLHGNRT+L+ D GQI
Sbjct 241 SNAMGLFHPFLDDAGVQIVGVEAAGHGIDTGKHAASLNGGVPGVLHGNRTFLLQDADGQI 300
Query 301 IETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHA 360
I+ HSISAGLDYPG+GPEH++L D RVEY I D+EAL+ F R+EGIIPA+ES+HA
Sbjct 301 IDAHSISAGLDYPGIGPEHAWLHDTGRVEYTSITDDEALEAFHTCCRLEGIIPALESSHA 360
Query 361 MAYVTKLAPTMDKDQIIIANVSGRGDKDLMTV 392
+A V K AP++ K+ I++ N+SGRGDKD+ TV
Sbjct 361 LAEVFKRAPSLPKEHIMVVNLSGRGDKDMQTV 392
>P12290 Tryptophan synthase beta chain [Caulobacter vibrioides
(strain ATCC 19089 / CB15)]
Length=406
Score = 522 bits (1345), Expect = 0.0
Identities = 254/395 (64%), Positives = 303/395 (77%), Gaps = 0/395 (0%)
Query 3 DYTQYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPS 62
DY+ YPDA G FG GGR+V+ETLM + DL Y K D +F A+ +Y GRPS
Sbjct 9 DYSAYPDAEGRFGGFGGRYVAETLMPLVLDLGKAYADAKADPEFQAQLKSYNTHYAGRPS 68
Query 63 PLYYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHG 122
PLY+AER ++ GGA+IY KR++LNHTGSHK+NN +GQ LLA GK RIIAETGAGQHG
Sbjct 69 PLYFAERLTEHFGGAKIYFKRDELNHTGSHKINNALGQILLAMRMGKTRIIAETGAGQHG 128
Query 123 VATATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRD 182
VATAT+ AR GL CVV+MGA DV+RQ NV+RM LLGA V PV SG+ TLKDAMNEAMRD
Sbjct 129 VATATVCARFGLPCVVYMGATDVERQKPNVFRMNLLGAEVRPVSSGTGTLKDAMNEAMRD 188
Query 183 WVTNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSN 242
WVTNV TYY+IGT AGPHPYP +VRDFQS+IG EAR QI E GRLPDA+VAC+GGGSN
Sbjct 189 WVTNVHDTYYLIGTAAGPHPYPVMVRDFQSVIGAEAREQILEMEGRLPDAVVACIGGGSN 248
Query 243 AIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIE 302
AIGLF+PFL D+ V++ GVEAAGHG+ T KH+A L G GVLHGNRTYL+ D GQII+
Sbjct 249 AIGLFHPFLGDEGVRLIGVEAAGHGVSTDKHAASLTGGRPGVLHGNRTYLLQDDDGQIID 308
Query 303 THSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMA 362
HSISAGLDYPG+GPEHSFL D+ R EYV D EAL+ F+ + +EGIIPA+E AHA+A
Sbjct 309 AHSISAGLDYPGIGPEHSFLHDIGRAEYVSTTDTEALEAFKLCSTLEGIIPALEPAHALA 368
Query 363 YVTKLAPTMDKDQIIIANVSGRGDKDLMTVARIDG 397
V ++A + K +I++ N+ GRGDKD+ TVA G
Sbjct 369 RVGEIAQELGKGKIVVMNLCGRGDKDIFTVAEALG 403
>Q84GJ9 Tryptophan synthase beta chain [Neisseria gonorrhoeae]
Length=400
Score = 522 bits (1345), Expect = 0.0
Identities = 251/394 (64%), Positives = 314/394 (80%), Gaps = 1/394 (0%)
Query 8 PDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLYYA 67
PD +G FG HGG +VSETL+ AL++LE YN KND +F AEF RDL +YVGRPSP+Y+A
Sbjct 7 PDEKGFFGEHGGLYVSETLIPALKELEQAYNEAKNDPEFWAEFRRDLKHYVGRPSPVYHA 66
Query 68 ERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATAT 127
R S+ LGGAQI+LKREDLNHTG+HKVNNTIGQALLA+ GKKR+IAETGAGQHGVA+AT
Sbjct 67 ARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALLARRMGKKRVIAETGAGQHGVASAT 126
Query 128 IAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVTNV 187
+AAR G+ V+MGA+D++RQ NV+RM+LLGA VI V SGS+TLKDAMNEAMR+WV V
Sbjct 127 VAARFGMTSDVYMGADDIQRQMPNVFRMKLLGANVIGVDSGSRTLKDAMNEAMREWVARV 186
Query 188 DSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLF 247
D T+Y+IGT AGP PYP++VRDFQ +IG EA+ Q+QE GR PD VACVGGGSNAIGLF
Sbjct 187 DDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAKAQMQEATGRQPDVAVACVGGGSNAIGLF 246
Query 248 YPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAG-HVGVLHGNRTYLMSDPQGQIIETHSI 306
YP++ +++V++ GVEA G ++T H+AP+ +G +GVLHG R+YLM D GQ++ THS+
Sbjct 247 YPYIEEENVRLVGVEAGGLDVDTPDHAAPITSGAPIGVLHGFRSYLMQDENGQVLGTHSV 306
Query 307 SAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTK 366
SAGLDYPG+GPEHS L D+ RVEY D+EAL+ F L R EGIIPA+ES+H + K
Sbjct 307 SAGLDYPGIGPEHSHLHDIKRVEYTVAKDDEALEAFDLLCRFEGIIPALESSHVVGSGDK 366
Query 367 LAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEM 400
M KDQ+I+ N+SGRGDKD+ TVA++ GIE+
Sbjct 367 TRRKMGKDQVILVNLSGRGDKDINTVAKLKGIEL 400
>P11080 Tryptophan synthase beta chain [Pseudomonas putida]
Length=405
Score = 513 bits (1321), Expect = 0.0
Identities = 248/392 (63%), Positives = 307/392 (78%), Gaps = 6/392 (2%)
Query 4 YTQYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAE---FDRDLAYYVGR 60
Y PDA G FG GGR+V+ETLM + DL Y K D +FL E F RD Y+GR
Sbjct 6 YRPGPDANGLFGSFGGRYVAETLMPLVLDLAREYEAAKADPKFLEELAYFQRD---YIGR 62
Query 61 PSPLYYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQ 120
P+PLY+AER ++ GGA+I+ KRE+LNHTG+HKVNN IGQ LLAK GKKR+IAETGAG
Sbjct 63 PNPLYFAERLTEHCGGAKIFFKREELNHTGAHKVNNCIGQVLLAKRMGKKRLIAETGAGM 122
Query 121 HGVATATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAM 180
HGVATAT+AAR GL CV++MGA D++RQ NV+RM+LLGA ++PV +G+ TLKDAMNEA+
Sbjct 123 HGVATATVAARFGLPCVIYMGATDIERQQANVFRMKLLGAEIVPVTAGTGTLKDAMNEAL 182
Query 181 RDWVTNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGG 240
RDWVTNV+ T+Y+IGTVAGPHPYP +VRDFQSIIG+E R Q+QE+ GRLPD+LVACVGGG
Sbjct 183 RDWVTNVEDTFYLIGTVAGPHPYPAMVRDFQSIIGKETRAQLQEKEGRLPDSLVACVGGG 242
Query 241 SNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQI 300
SNA+GLF+ FL + V++ GVEA GHG+ T KH+A LN G GVLHGNRTYL+ D GQI
Sbjct 243 SNAMGLFHEFLEEPSVQIIGVEAGGHGVHTDKHAASLNGGVPGVLHGNRTYLLQDEDGQI 302
Query 301 IETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHA 360
+ HSISAGLDYPG+GPEH++L ++ RVEYV I D+EAL F R+EGIIPA+ES+HA
Sbjct 303 TDAHSISAGLDYPGIGPEHAYLHEVKRVEYVSITDDEALDAFHATCRLEGIIPALESSHA 362
Query 361 MAYVTKLAPTMDKDQIIIANVSGRGDKDLMTV 392
+A K AP + KD +++ +SGRGDKD+ TV
Sbjct 363 LAEAIKRAPKLPKDHLMVVCLSGRGDKDMQTV 394
>P16609 Tryptophan synthase beta chain [Thermus thermophilus (strain
ATCC BAA-163 / DSM 7039 / HB27)]
Length=404
Score = 511 bits (1316), Expect = 0.0
Identities = 247/395 (63%), Positives = 308/395 (78%), Gaps = 2/395 (1%)
Query 8 PDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLYYA 67
PDARG FG +GGR+V ETL+ ALE+LE Y K D FL E D L + GRP+PLY+A
Sbjct 10 PDARGRFGPYGGRYVPETLIPALEELEAAYREAKKDPAFLEELDHYLRQFAGRPTPLYHA 69
Query 68 ERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATAT 127
+R S+ GGAQ++LKREDL HTG+HK+NNT+GQALLA+ GK+R+IAETGAGQHGV+ AT
Sbjct 70 KRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQALLARRMGKRRVIAETGAGQHGVSVAT 129
Query 128 IAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVTNV 187
+AA GLECVV+MG EDV+RQA+NV+RM+LLGA V PV +GS+TLKDA NEA+RDW+TNV
Sbjct 130 VAALFGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNV 189
Query 188 DSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLF 247
+T+Y++G+V GPHPYP +VRDFQS+IG E +RQ E GRLPDAL+A VGGGSNAIGLF
Sbjct 190 RTTFYILGSVVGPHPYPMMVRDFQSVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLF 249
Query 248 YPF--LNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHS 305
PF L + K+ GVEAAG G+ TG+H+A + AG GVLHG+ YL+ D GQI HS
Sbjct 250 APFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSYMYLLYDHDGQITPAHS 309
Query 306 ISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVT 365
+SAGLDYPGVGPEHS+ D EY + D EAL+GF+ L R+EGIIPA+ESAHA+AY
Sbjct 310 VSAGLDYPGVGPEHSYYADAGVAEYASVTDEEALEGFKLLARLEGIIPALESAHAIAYAA 369
Query 366 KLAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEM 400
K+ P MDKDQ+++ N+SGRGDKD+ V R+ G E+
Sbjct 370 KVVPEMDKDQVVVINLSGRGDKDVTEVMRLLGGEL 404
Score = 21.9 bits (45), Expect = 0.62
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 0/35 (0%)
Query 367 LAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMV 401
LA M K ++I +G+ + TVA + G+E V
Sbjct 105 LARRMGKRRVIAETGAGQHGVSVATVAALFGLECV 139
>Q8U093 Tryptophan synthase beta chain 1 [Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)]
Length=388
Score = 508 bits (1307), Expect = 0.0
Identities = 243/384 (63%), Positives = 305/384 (79%), Gaps = 0/384 (0%)
Query 14 FGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLYYAERWSKK 73
FG GG++V ETL+ L++LE Y R K+DE+F + + L + GRP+PLYYA+R ++K
Sbjct 3 FGEFGGQYVPETLIEPLKELEKAYKRFKDDEEFNRQLNYYLKTWAGRPTPLYYAKRLTEK 62
Query 74 LGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATATIAARLG 133
+GGA+IYLKREDL H G+HK NN IGQALLAK GK R+IAETGAGQHGVATA A LG
Sbjct 63 IGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGKTRLIAETGAGQHGVATAMAGALLG 122
Query 134 LECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVTNVDSTYYV 193
++ ++MGAEDV+RQ MNV+RM+LLGA VIPV SGS+TLKDA+NEA+RDWV + T+Y+
Sbjct 123 MKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYL 182
Query 194 IGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLFYPFLND 253
IG+V GPHPYP +VRDFQS+IGREA+ QI E G+LPD +VACVGGGSNA+G+FYPF+ND
Sbjct 183 IGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVND 242
Query 254 QDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHSISAGLDYP 313
+ VK+ GVEA G G+E+GKHSA LNAG VGV HG +Y + D +GQI THSI+ GLDYP
Sbjct 243 KKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLDYP 302
Query 314 GVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTKLAPTMDK 373
GVGPEH++LK + R EYV + D EAL+ F +L+R EGIIPA+ESAHA+AY KLA M +
Sbjct 303 GVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEMSR 362
Query 374 DQIIIANVSGRGDKDLMTVARIDG 397
D+III N+SGRGDKDL V ++ G
Sbjct 363 DEIIIVNLSGRGDKDLDIVLKVSG 386
>Q9YGB0 Tryptophan synthase beta chain 1 [Thermococcus kodakarensis
(strain ATCC BAA-918 / JCM 12380 / KOD1)]
Length=389
Score = 504 bits (1297), Expect = 0.0
Identities = 246/385 (64%), Positives = 305/385 (79%), Gaps = 1/385 (0%)
Query 14 FGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLYYAERWSKK 73
FG GG+FV ETL+ L+ LE Y + K+D +F + L + GRP+PLYYAER SKK
Sbjct 6 FGRFGGQFVPETLIEPLKKLERAYKKFKDDPEFNETLEYYLRNWAGRPTPLYYAERLSKK 65
Query 74 LGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATATIAARLG 133
LGGA+IYLKREDL H G+HK NN IGQALLAK GK+R+IAETGAGQHGVATA A LG
Sbjct 66 LGGAKIYLKREDLLHGGAHKTNNGIGQALLAKFMGKERLIAETGAGQHGVATAMAGALLG 125
Query 134 LECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVTNVDSTYYV 193
++ V+MGAEDV+RQ MNV+RM LLGA VIPV+SGS+TLKDA+NEA+RDWV + ++Y+
Sbjct 126 MKVDVYMGAEDVERQKMNVFRMGLLGARVIPVESGSRTLKDAINEALRDWVATFEYSHYL 185
Query 194 IGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLFYPFLND 253
IG+V GP+PYP +VRDFQS+IGREAR QI E G LPDA+VACVGGGSNA+G+FYPF+ND
Sbjct 186 IGSVVGPYPYPVIVRDFQSVIGREAREQILEAEGTLPDAVVACVGGGSNAMGIFYPFVND 245
Query 254 QDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHSISAGLDYP 313
+ V++ GVEA G G+ETG H+A LNAG +GV HG +Y + + +GQI THS+SAGLDYP
Sbjct 246 R-VRLIGVEAGGKGLETGLHAASLNAGELGVFHGMLSYFLQNEEGQITPTHSVSAGLDYP 304
Query 314 GVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTKLAPTMDK 373
GVGPEH++LKD R EYV + D EAL+ F +L+R EGI+PA+ESAHA+AY K+AP MDK
Sbjct 305 GVGPEHAYLKDSGRAEYVTVTDEEALRAFHELSRTEGILPALESAHAVAYAMKIAPEMDK 364
Query 374 DQIIIANVSGRGDKDLMTVARIDGI 398
D+III N+SGRGDKDL V R+ +
Sbjct 365 DEIIIVNLSGRGDKDLDIVRRVGNV 389
Lambda K H a alpha
0.320 0.138 0.405 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2580160
Database: cd1eb0919e3e34ac05b56387e203444e.SwissProt.fasta
Posted date: May 15, 2024 5:06 AM
Number of letters in database: 8,422
Number of sequences in database: 21
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
