BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: a697709736c89e6c31583a3e55c22985.SwissProt.fasta
20 sequences; 4,266 total letters
Query= ACIAD0734
Length=171
Score E
Sequences producing significant alignments: (Bits) Value
Q9I0J8 NADH-quinone oxidoreductase subunit E [Pseudomonas aerugin... 196 2e-68
P0AFD3 NADH-quinone oxidoreductase subunit E [Shigella flexneri] 190 4e-66
P0AFD2 NADH-quinone oxidoreductase subunit E [Escherichia coli O6... 190 4e-66
P0AFD1 NADH-quinone oxidoreductase subunit E [Escherichia coli (s... 190 4e-66
P0A1Y9 NADH-quinone oxidoreductase subunit E [Salmonella typhi] 187 4e-65
P0A1Y8 NADH-quinone oxidoreductase subunit E [Salmonella typhimur... 187 4e-65
P57255 NADH-quinone oxidoreductase subunit E [Buchnera aphidicola... 172 6e-59
Q8K9Y4 NADH-quinone oxidoreductase subunit E [Buchnera aphidicola... 160 2e-54
Q89AU3 NADH-quinone oxidoreductase subunit E [Buchnera aphidicola... 145 3e-48
P56910 NADH-quinone oxidoreductase subunit E 2 [Rhizobium melilot... 107 1e-33
O66842 NADH-quinone oxidoreductase subunit E [Aquifex aeolicus (s... 101 4e-31
P19234 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondr... 103 4e-31
Q20719 Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, m... 102 6e-31
P19404 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondr... 102 8e-31
P04394 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondr... 102 2e-30
P40915 NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondri... 89.0 2e-25
Q46505 NADP-reducing hydrogenase subunit HndA [Solidesulfovibrio ... 84.7 1e-24
Q56221 NADH-quinone oxidoreductase subunit 2 [Thermus thermophilu... 81.6 2e-23
P22317 NAD-reducing hydrogenase HoxS subunit alpha [Cupriavidus n... 77.0 2e-20
P29914 NADH-quinone oxidoreductase chain 2 [Paracoccus denitrific... 63.2 6e-16
>Q9I0J8 NADH-quinone oxidoreductase subunit E [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=166
Score = 196 bits (498), Expect = 2e-68
Identities = 90/154 (58%), Positives = 117/154 (76%), Gaps = 0/154 (0%)
Query 17 ILTADEIHEIEHHIHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGV 76
+L+ E IEH +HHY PRAAS++ALK VQ++ GWV D + AI ++L I +D+EGV
Sbjct 13 VLSETERSSIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIPAIGEVLGIPASDVEGV 72
Query 77 ATFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPIC 136
ATFY++I+RQPVGRH+I +CDS+ C++ G E++ Q++LGI GQTTADGRFTLLP+C
Sbjct 73 ATFYSQIFRQPVGRHIIRVCDSMVCYIGGHESVVGEIQKQLGIGLGQTTADGRFTLLPVC 132
Query 137 CLGNCDKGPTLMIDEDTHGLVDVSSVKQLLEKYV 170
CLGNCDK P LMID+DTHG V V +LLE YV
Sbjct 133 CLGNCDKAPALMIDDDTHGDVRPDGVAKLLEAYV 166
>P0AFD3 NADH-quinone oxidoreductase subunit E [Shigella flexneri]
Length=166
Score = 190 bits (483), Expect = 4e-66
Identities = 87/152 (57%), Positives = 115/152 (76%), Gaps = 0/152 (0%)
Query 18 LTADEIHEIEHHIHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGVA 77
L+A E IEH +HHY PRAAS++ALK VQ++ GWV D ++AIA +L I +D+EGVA
Sbjct 14 LSAAEREAIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIHAIADVLGIPASDVEGVA 73
Query 78 TFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICC 137
TFY++I+RQPVGRHVI CDS+ C + G + + A +++L I+ GQTT DGRFTLLP CC
Sbjct 74 TFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTLLPTCC 133
Query 138 LGNCDKGPTLMIDEDTHGLVDVSSVKQLLEKY 169
LGNCDKGP +MIDEDTH + ++ +LLE+Y
Sbjct 134 LGNCDKGPNMMIDEDTHAHLTPEAIPELLERY 165
>P0AFD2 NADH-quinone oxidoreductase subunit E [Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=166
Score = 190 bits (483), Expect = 4e-66
Identities = 87/152 (57%), Positives = 115/152 (76%), Gaps = 0/152 (0%)
Query 18 LTADEIHEIEHHIHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGVA 77
L+A E IEH +HHY PRAAS++ALK VQ++ GWV D ++AIA +L I +D+EGVA
Sbjct 14 LSAAEREAIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIHAIADVLGIPASDVEGVA 73
Query 78 TFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICC 137
TFY++I+RQPVGRHVI CDS+ C + G + + A +++L I+ GQTT DGRFTLLP CC
Sbjct 74 TFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTLLPTCC 133
Query 138 LGNCDKGPTLMIDEDTHGLVDVSSVKQLLEKY 169
LGNCDKGP +MIDEDTH + ++ +LLE+Y
Sbjct 134 LGNCDKGPNMMIDEDTHAHLTPEAIPELLERY 165
>P0AFD1 NADH-quinone oxidoreductase subunit E [Escherichia coli
(strain K12)]
Length=166
Score = 190 bits (483), Expect = 4e-66
Identities = 87/152 (57%), Positives = 115/152 (76%), Gaps = 0/152 (0%)
Query 18 LTADEIHEIEHHIHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGVA 77
L+A E IEH +HHY PRAAS++ALK VQ++ GWV D ++AIA +L I +D+EGVA
Sbjct 14 LSAAEREAIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIHAIADVLGIPASDVEGVA 73
Query 78 TFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICC 137
TFY++I+RQPVGRHVI CDS+ C + G + + A +++L I+ GQTT DGRFTLLP CC
Sbjct 74 TFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTLLPTCC 133
Query 138 LGNCDKGPTLMIDEDTHGLVDVSSVKQLLEKY 169
LGNCDKGP +MIDEDTH + ++ +LLE+Y
Sbjct 134 LGNCDKGPNMMIDEDTHAHLTPEAIPELLERY 165
>P0A1Y9 NADH-quinone oxidoreductase subunit E [Salmonella typhi]
Length=166
Score = 187 bits (476), Expect = 4e-65
Identities = 87/152 (57%), Positives = 112/152 (74%), Gaps = 0/152 (0%)
Query 18 LTADEIHEIEHHIHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGVA 77
L+A E IEH HHY PRAAS++ALK VQ++ GWV D + AIA +L I +D+EGVA
Sbjct 14 LSAAEREAIEHEKHHYEDPRAASIEALKIVQKQRGWVPDGAIYAIADVLGIPASDVEGVA 73
Query 78 TFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICC 137
TFY++I+RQPVGRHVI CDS+ C + G + + A ++ L I+ GQTT DGRFTLLP CC
Sbjct 74 TFYSQIFRQPVGRHVIRYCDSVVCHITGYQGIQAALEKNLNIKPGQTTFDGRFTLLPTCC 133
Query 138 LGNCDKGPTLMIDEDTHGLVDVSSVKQLLEKY 169
LGNCDKGP +MIDEDTH + ++ +LLE+Y
Sbjct 134 LGNCDKGPNMMIDEDTHSHLTPEAIPELLERY 165
>P0A1Y8 NADH-quinone oxidoreductase subunit E [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=166
Score = 187 bits (476), Expect = 4e-65
Identities = 87/152 (57%), Positives = 112/152 (74%), Gaps = 0/152 (0%)
Query 18 LTADEIHEIEHHIHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGVA 77
L+A E IEH HHY PRAAS++ALK VQ++ GWV D + AIA +L I +D+EGVA
Sbjct 14 LSAAEREAIEHEKHHYEDPRAASIEALKIVQKQRGWVPDGAIYAIADVLGIPASDVEGVA 73
Query 78 TFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICC 137
TFY++I+RQPVGRHVI CDS+ C + G + + A ++ L I+ GQTT DGRFTLLP CC
Sbjct 74 TFYSQIFRQPVGRHVIRYCDSVVCHITGYQGIQAALEKNLNIKPGQTTFDGRFTLLPTCC 133
Query 138 LGNCDKGPTLMIDEDTHGLVDVSSVKQLLEKY 169
LGNCDKGP +MIDEDTH + ++ +LLE+Y
Sbjct 134 LGNCDKGPNMMIDEDTHSHLTPEAIPELLERY 165
>P57255 NADH-quinone oxidoreductase subunit E [Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS)]
Length=162
Score = 172 bits (435), Expect = 6e-59
Identities = 80/158 (51%), Positives = 117/158 (74%), Gaps = 0/158 (0%)
Query 12 VNVEGILTADEIHEIEHHIHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVA 71
++++ LT +EI+ IE+ +Y RA S++ALK VQ++ GWV D + AIA++L I+ +
Sbjct 4 ISIKFKLTNEEINAIENQKKYYEDFRAISIEALKIVQKKRGWVSDQAIYAIAEILHINPS 63
Query 72 DLEGVATFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFT 131
D+EGVATFY++I+R+PVGR++I CDS+ CFL G + + A + L I+ G+TT D RFT
Sbjct 64 DVEGVATFYSQIFRKPVGRNIIRYCDSVVCFLTGYKRIQIALENYLKIKIGETTKDDRFT 123
Query 132 LLPICCLGNCDKGPTLMIDEDTHGLVDVSSVKQLLEKY 169
LLP+CCLGNCDKGPT+MI+EDT+ ++ S+ LLE Y
Sbjct 124 LLPVCCLGNCDKGPTIMINEDTYSVLTPESIPSLLESY 161
>Q8K9Y4 NADH-quinone oxidoreductase subunit E [Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg)]
Length=168
Score = 160 bits (406), Expect = 2e-54
Identities = 79/166 (48%), Positives = 113/166 (68%), Gaps = 3/166 (2%)
Query 7 DKKPRV---NVEGILTADEIHEIEHHIHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIA 63
DKK ++ + LT EI+EIE +Y R+ S++ALK VQ++ GWV D + IA
Sbjct 2 DKKKKIKEISTTFTLTTFEINEIEKQKKYYENSRSVSIEALKIVQKKRGWVCDQAIIEIA 61
Query 64 QMLSISVADLEGVATFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQ 123
+L+++ +++E VATFY++IYRQPVGR+VI CDS+ C+L G E + + + L I+ G
Sbjct 62 NILNLNPSEVESVATFYSQIYRQPVGRNVIRYCDSVVCYLTGYEKIKKFLEDYLFIKIGN 121
Query 124 TTADGRFTLLPICCLGNCDKGPTLMIDEDTHGLVDVSSVKQLLEKY 169
TT DGRFTLLP+CCLGNCDK PT+MI+ED + ++ + LLE Y
Sbjct 122 TTVDGRFTLLPVCCLGNCDKAPTIMINEDLYSHLNPDLIPNLLELY 167
>Q89AU3 NADH-quinone oxidoreductase subunit E [Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp)]
Length=171
Score = 145 bits (365), Expect = 3e-48
Identities = 68/159 (43%), Positives = 107/159 (67%), Gaps = 0/159 (0%)
Query 11 RVNVEGILTADEIHEIEHHIHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISV 70
+++++ LT E EI + I +Y R++ ++ LK VQ+ GW+ + + +A +L IS
Sbjct 12 KIDIKFKLTIQEKIEIFNIIKNYRTVRSSLIEILKFVQKSYGWISNELITELACILKISK 71
Query 71 ADLEGVATFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRF 130
D+E +ATFY++I+RQP+GR++I CDS+ C++ G E + + ++ L + G+TT D +F
Sbjct 72 CDIEEIATFYSQIFRQPIGRNIIKYCDSVVCYVNGCEKIRCSLEKNLNVNVGETTKDFKF 131
Query 131 TLLPICCLGNCDKGPTLMIDEDTHGLVDVSSVKQLLEKY 169
TLLPICCLGNCDK PT+MI++D + V SV LLE Y
Sbjct 132 TLLPICCLGNCDKSPTIMINDDLYSNVTEYSVIVLLESY 170
>P56910 NADH-quinone oxidoreductase subunit E 2 [Rhizobium meliloti
(strain 1021)]
Length=168
Score = 107 bits (268), Expect = 1e-33
Identities = 52/145 (36%), Positives = 83/145 (57%), Gaps = 0/145 (0%)
Query 25 EIEHHIHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGVATFYNRIY 84
EIE YP R+A + AL Q+ +G + + +AQ+L + + +ATFY +
Sbjct 6 EIEAAAARYPDRRSAIMPALMIAQKEHGHLPGPVLEEVAQILGVERVWVYELATFYTLFH 65
Query 85 RQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICCLGNCDKG 144
+P+GR + LCD+++C L G+E L + LGI+ G+TT DG FTL + CLG C+
Sbjct 66 TEPIGRFHLQLCDNVSCMLCGSEALLTHLETTLGIRKGETTPDGAFTLSTVECLGACEMA 125
Query 145 PTLMIDEDTHGLVDVSSVKQLLEKY 169
P + + +D HG +D + + LLE +
Sbjct 126 PVMQVGDDYHGNLDAARLDALLESF 150
>O66842 NADH-quinone oxidoreductase subunit E [Aquifex aeolicus
(strain VF5)]
Length=160
Score = 101 bits (251), Expect = 4e-31
Identities = 46/145 (32%), Positives = 82/145 (57%), Gaps = 0/145 (0%)
Query 25 EIEHHIHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGVATFYNRIY 84
+++ HI+++P R A L L +Q G++ + +A ML + + +EGV FY+
Sbjct 15 KLQEHINYFPKKRQAILLCLHEIQNYYGYIPPESLKPLADMLELPLNHVEGVVAFYDMFD 74
Query 85 RQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICCLGNCDKG 144
R+ ++ I +C SI C LMG L +A + LGI+ G+ T DG+F ++P+ CLG C +
Sbjct 75 REDKAKYRIRVCVSIVCHLMGTNKLLKALENILGIKPGEVTPDGKFKIVPVQCLGACSEA 134
Query 145 PTLMIDEDTHGLVDVSSVKQLLEKY 169
P M+++D + + ++L +Y
Sbjct 135 PVFMVNDDEYKFESEVQLNEILSRY 159
>P19234 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial
[Rattus norvegicus]
Length=248
Score = 103 bits (257), Expect = 4e-31
Identities = 51/152 (34%), Positives = 89/152 (59%), Gaps = 2/152 (1%)
Query 19 TADEIHEIEHHIHHYP--YPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGV 76
T + IE + +YP + AA L L QR+NGW+ + MN +A++L + + V
Sbjct 55 TPENYERIEAIVRNYPEGHRAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEV 114
Query 77 ATFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPIC 136
ATFY R+PVG++ I +C + C L ++++ E QR+LGI+ G+TT D FTL+ +
Sbjct 115 ATFYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKLGIKVGETTPDKLFTLIEVE 174
Query 137 CLGNCDKGPTLMIDEDTHGLVDVSSVKQLLEK 168
CLG C P + I++D + + +++++++
Sbjct 175 CLGACVNAPMVQINDDYYEDLTPKDIEEIIDE 206
>Q20719 Probable NADH dehydrogenase [ubiquinone] flavoprotein
2, mitochondrial [Caenorhabditis elegans]
Length=239
Score = 102 bits (255), Expect = 6e-31
Identities = 55/169 (33%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Query 1 MMMILTDKKPRVNVEGILTADEIHEIEHHIHHYP--YPRAASLDALKCVQRRNGWVDDAQ 58
+M+ K+ +NV+ T++ I+ + YP + A + L QR++GW+ +
Sbjct 27 LMVHRDTKENNLNVKFKFTSENQERIKAIMDIYPEGHKAGALIPLLDLAQRQHGWLPISA 86
Query 59 MNAIAQMLSISVADLEGVATFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELG 118
M+ +A++L + VATFY RQPVG++ + +C + C L GAET+ E +++LG
Sbjct 87 MHEVAKILEVPRMRAYEVATFYTMFNRQPVGKYFLQVCATTPCMLRGAETITETIEKKLG 146
Query 119 IQYGQTTADGRFTLLPICCLGNCDKGPTLMIDEDTHGLVDVSSVKQLLE 167
I G+TT DG FTL + CLG C P + I++D + V ++L+
Sbjct 147 IHAGETTKDGLFTLAEVECLGACVNAPMIQINDDYFEDLTPKDVNEILD 195
>P19404 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial
[Homo sapiens]
Length=249
Score = 102 bits (255), Expect = 8e-31
Identities = 50/152 (33%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Query 19 TADEIHEIEHHIHHYP--YPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGV 76
T + IE + +YP + AA L L QR+NGW+ + MN +A++L + + V
Sbjct 56 TPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEV 115
Query 77 ATFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPIC 136
ATFY R+PVG++ I +C + C L ++++ EA Q++LGI+ G+TT D FTL+ +
Sbjct 116 ATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVE 175
Query 137 CLGNCDKGPTLMIDEDTHGLVDVSSVKQLLEK 168
CLG C P + I+++ + + +++++++
Sbjct 176 CLGACVNAPMVQINDNYYEDLTAKDIEEIIDE 207
>P04394 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial
[Bos taurus]
Length=249
Score = 102 bits (253), Expect = 2e-30
Identities = 50/152 (33%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Query 19 TADEIHEIEHHIHHYP--YPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGV 76
T + IE + +YP + AA L L QR+NGW+ + MN +A++L + + V
Sbjct 56 TPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNGWLPISAMNKVAEILQVPPMRVYEV 115
Query 77 ATFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPIC 136
ATFY R+PVG++ I +C + C L ++++ EA Q++LGI+ G+TT D FTL+ +
Sbjct 116 ATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVE 175
Query 137 CLGNCDKGPTLMIDEDTHGLVDVSSVKQLLEK 168
CLG C P + I+++ + + +++++++
Sbjct 176 CLGACVNAPMVQINDNYYEDLTPKDIEEIIDE 207
>P40915 NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial
[Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987)]
Length=263
Score = 89.0 bits (219), Expect = 2e-25
Identities = 51/152 (34%), Positives = 83/152 (55%), Gaps = 4/152 (3%)
Query 19 TADEIHEIEHHIHHYP--YPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGV 76
+AD IE I YP Y +AA + L QR++G+ + MN +A++L + + V
Sbjct 64 SADNEKVIEEIIKRYPPQYKKAAVMPLLDLGQRQHGFCSISVMNEVARLLEMPPMRVYEV 123
Query 77 ATFYNRIYRQPVGRHVILLCDSIACFL--MGAETLAEAFQRELGIQYGQTTADGRFTLLP 134
A+FY R PVG+ + C + C L G++ + +A + LGI+ G+TT DG FT +
Sbjct 124 ASFYTMYNRTPVGKFHVQACTTTPCQLGGCGSDVIVKAIKEHLGIKQGETTPDGLFTFIE 183
Query 135 ICCLGNCDKGPTLMIDEDTHGLVDVSSVKQLL 166
+ CLG C P + I++D + ++KQ+L
Sbjct 184 VECLGACANAPMVQINDDYFEDLTPETIKQVL 215
>Q46505 NADP-reducing hydrogenase subunit HndA [Solidesulfovibrio
fructosivorans]
Length=171
Score = 84.7 bits (208), Expect = 1e-24
Identities = 46/159 (29%), Positives = 75/159 (47%), Gaps = 0/159 (0%)
Query 11 RVNVEGILTADEIHEIEHHIHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISV 70
RV +L E+ I P + L Q G++ +A + + +
Sbjct 13 RVPEHAVLPQPLYREVVQFIESLPQKEGHLVTVLHKAQSVFGYLPIEVQQFVADHMEVPL 72
Query 71 ADLEGVATFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRF 130
A + GV +FY P G++ I +C ACF+ GA+ + AF+ +L I G T DGRF
Sbjct 73 AQVYGVVSFYTFFTMVPKGKYPISVCMGTACFVKGADKVVHAFKEQLKIDIGDVTPDGRF 132
Query 131 TLLPICCLGNCDKGPTLMIDEDTHGLVDVSSVKQLLEKY 169
++ + C+G C P +M+ E +G V VK++L +Y
Sbjct 133 SIDTLRCVGGCALAPIVMVGEKVYGNVTPGQVKKILAEY 171
>Q56221 NADH-quinone oxidoreductase subunit 2 [Thermus thermophilus
(strain ATCC 27634 / DSM 579 / HB8)]
Length=181
Score = 81.6 bits (200), Expect = 2e-23
Identities = 37/118 (31%), Positives = 70/118 (59%), Gaps = 0/118 (0%)
Query 37 RAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGVATFYNRIYRQPVGRHVILLC 96
RAA + L+ VQ+ GW+ ++ IA+++ + ++ GVA+FY+ P G++ + +C
Sbjct 24 RAAIMPLLRRVQQEEGWIRPERIEEIARLVGTTPTEVMGVASFYSYYQFVPTGKYHLQVC 83
Query 97 DSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICCLGNCDKGPTLMIDEDTH 154
+++C L GAE L + LGI G+ T DG F++ + CLG+C P + ++++ +
Sbjct 84 ATLSCKLAGAEELWDYLTETLGIGPGEVTPDGLFSVQKVECLGSCHTAPVIQVNDEPY 141
Score = 16.5 bits (31), Expect = 5.2
Identities = 7/22 (32%), Positives = 10/22 (45%), Gaps = 6/22 (27%)
Query 16 GILTADEIHEIE------HHIH 31
G+ + EIE HH+H
Sbjct 156 GLRAGKRLEEIELPGKCGHHVH 177
>P22317 NAD-reducing hydrogenase HoxS subunit alpha [Cupriavidus
necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB
10442 / H16 / Stanier 337)]
Length=602
Score = 77.0 bits (188), Expect = 2e-20
Identities = 39/122 (32%), Positives = 66/122 (54%), Gaps = 0/122 (0%)
Query 30 IHHYPYPRAASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGVATFYNRIYRQPVG 89
+ Y R +D L VQ G + DA + + L +S D+ A+FY+ +P G
Sbjct 9 LERYRSDRTRLIDILWDVQHEYGHIPDAVLPQLGAGLKLSPLDIRETASFYHFFLDKPSG 68
Query 90 RHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICCLGNCDKGPTLMI 149
++ I LC+S+ + G + + EA +RE GI++G+T +G F L C+G D+ P ++I
Sbjct 69 KYRIYLCNSVIAKINGYQAVREALERETGIRFGETDPNGMFGLFDTPCIGLSDQEPAMLI 128
Query 150 DE 151
D+
Sbjct 129 DK 130
>P29914 NADH-quinone oxidoreductase chain 2 [Paracoccus denitrificans]
Length=239
Score = 63.2 bits (152), Expect = 6e-16
Identities = 40/140 (29%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query 33 YPYPR--AASLDALKCVQRRNGWVDDAQMNAIAQMLSISVADLEGVATFYNRIYRQPVGR 90
YP R +A + L Q + GW+ + A +L + VATFY QPVG
Sbjct 30 YPEGRQQSAIIPVLWRAQEQEGWLSRPAIEYCADLLGMPYIRALEVATFYFMFQLQPVGS 89
Query 91 HV-ILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICCLGNCDKGPTLMI 149
I +C + C + GAE L + ++ + +ADGRF+ + CLG C P I
Sbjct 90 VAHIQICGTTTCMICGAEDLIRVCKEKIAPEPHALSADGRFSWEEVECLGACTNAPMAQI 149
Query 150 DEDTHGLVDVSSVKQLLEKY 169
+D + + V + L++++
Sbjct 150 GKDFYEDLTVEKLAALIDRF 169
Lambda K H a alpha
0.327 0.141 0.434 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 460152
Database: a697709736c89e6c31583a3e55c22985.SwissProt.fasta
Posted date: May 9, 2024 4:38 PM
Number of letters in database: 4,266
Number of sequences in database: 20
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
