BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 4ffb1e26dce661489bf89426f1bb3dbd.SwissProt.fasta
19 sequences; 8,525 total letters
Query= ACIAD0735
Length=444
Score E
Sequences producing significant alignments: (Bits) Value
P31979 NADH-quinone oxidoreductase subunit F [Escherichia coli (s... 579 0.0
P33901 NADH-quinone oxidoreductase subunit F [Salmonella typhimur... 578 0.0
Q9I0J7 NADH-quinone oxidoreductase subunit F [Pseudomonas aerugin... 546 0.0
Q89AU2 NADH-quinone oxidoreductase subunit F [Buchnera aphidicola... 534 0.0
P57256 NADH-quinone oxidoreductase subunit F [Buchnera aphidicola... 527 0.0
Q8K9Y3 NADH-quinone oxidoreductase subunit F [Buchnera aphidicola... 522 0.0
P56913 NADH-quinone oxidoreductase subunit F 2 [Rhizobium melilot... 419 5e-148
Q9XAQ9 NADH-quinone oxidoreductase subunit F [Streptomyces coelic... 397 1e-138
P9WIV7 NADH-quinone oxidoreductase subunit F [Mycobacterium tuber... 390 5e-136
P9WIV6 NADH-quinone oxidoreductase subunit F [Mycobacterium tuber... 390 5e-136
P65568 NADH-quinone oxidoreductase subunit F [Mycobacterium bovis... 390 5e-136
Q56222 NADH-quinone oxidoreductase subunit 1 [Thermus thermophilu... 380 2e-132
Q46507 NADP-reducing hydrogenase subunit HndC [Solidesulfovibrio ... 339 1e-115
P29913 NADH-quinone oxidoreductase chain 1 [Paracoccus denitrific... 333 6e-114
P24917 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondri... 330 6e-112
O07948 NADH-quinone oxidoreductase subunit F [Rhodobacter capsula... 320 4e-109
A8GQT6 NADH-quinone oxidoreductase subunit F [Rickettsia ricketts... 316 1e-107
Q54I90 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondr... 312 2e-105
P49821 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondr... 310 1e-104
>P31979 NADH-quinone oxidoreductase subunit F [Escherichia coli
(strain K12)]
Length=445
Score = 579 bits (1492), Expect = 0.0
Identities = 284/426 (67%), Positives = 337/426 (79%), Gaps = 5/426 (1%)
Query 14 PETHPLTWRLSKQEHVRSADDYEALDGYAGFKKAI-GMTPAEVLDVVKAATVKGRGGAGF 72
PETHPLTWRL + D+Y + +GY G +KA+ G++P E+++ VK A +KGRGGAGF
Sbjct 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGF 67
Query 73 PAGIKWSLMAPNDG-GPRYLICNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEATQ 131
G+KWSLM ++ RYL+CNADEMEPGT+KDRLLME+LPH L+EGMLI+A+ L+A +
Sbjct 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127
Query 132 GYIFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETALI 191
GYIF+RGEYIEAA L A+ +A G LG NI+GTG++FEL+VHTGAGRYICGEETALI
Sbjct 128 GYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187
Query 192 NSLEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKDP 251
NSLEGRRANPR+KPPFP +GAWG+PT VNNVET N+PAI+ G EWY +S KSKD
Sbjct 188 NSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS--KSKDA 245
Query 252 GTKIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGLKLKAWLPGGASTDFLAAEHI 311
GTK+ G SG+VK PGLWELPFGTTARE++E++AGGMRDGLK KAW PGGA TDFL H+
Sbjct 246 GTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305
Query 312 DLPMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWAV 371
DLPM+ ESI KAGSRLGT L M VD MVS RNLEEFFARESCGWCTPCRDGLPW+V
Sbjct 306 DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSV 365
Query 372 KALKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKVAK 431
K L+ALE GEG+ DI+ L++L R L GKTFCAHAPGA+EPL A+KYFR EFEA + K
Sbjct 366 KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI-K 424
Query 432 SPVVQT 437
P T
Sbjct 425 QPFSNT 430
>P33901 NADH-quinone oxidoreductase subunit F [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=445
Score = 578 bits (1491), Expect = 0.0
Identities = 283/426 (66%), Positives = 336/426 (79%), Gaps = 5/426 (1%)
Query 14 PETHPLTWRLSKQEHVRSADDYEALDGYAGFKKAI-GMTPAEVLDVVKAATVKGRGGAGF 72
PETHPLTWRL + D+Y + +GY G +KA+ G++P E++ VK A +KGRGGAGF
Sbjct 8 PETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVSQVKDAGLKGRGGAGF 67
Query 73 PAGIKWSLMAPNDG-GPRYLICNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEATQ 131
G+KWSLM ++ RYL+CNADEMEPGT+KDRLLME+LPH L+EGMLI+A+ L+A +
Sbjct 68 STGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYR 127
Query 132 GYIFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETALI 191
GYIF+RGEYIEAA +L A+ +A G LG NI+GTG++FEL+VHTGAGRYICGEETALI
Sbjct 128 GYIFLRGEYIEAAVHLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALI 187
Query 192 NSLEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKDP 251
NSLEGRRANPR+KPPFP +G WG+PT VNNVET N+PAI+ G EWY +S KSKD
Sbjct 188 NSLEGRRANPRSKPPFPATSGVWGKPTCVNNVETLCNVPAILANGVEWYQNIS--KSKDA 245
Query 252 GTKIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGLKLKAWLPGGASTDFLAAEHI 311
GTK+ G SG+VK PGLWELPFGTTARE++E++AGGMRDGLK KAW PGGA TDFL H+
Sbjct 246 GTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHL 305
Query 312 DLPMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWAV 371
DLPM+ ESI KAGSRLGT L M VD MVS RNLEEFFARESCGWCTPCRDGLPW+V
Sbjct 306 DLPMEFESIGKAGSRLGTALAMAVDHEIGMVSLVRNLEEFFARESCGWCTPCRDGLPWSV 365
Query 372 KALKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKVAK 431
K L+ALE GEG+ DI+ L++L R L GKTFCAHAPGA+EPL A+KYFR EFEA + K
Sbjct 366 KILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGI-K 424
Query 432 SPVVQT 437
P T
Sbjct 425 QPFSNT 430
>Q9I0J7 NADH-quinone oxidoreductase subunit F [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=448
Score = 546 bits (1406), Expect = 0.0
Identities = 261/421 (62%), Positives = 328/421 (78%), Gaps = 2/421 (0%)
Query 15 ETHPLTWRLSKQEHVRSADDYEALDGYAGFKKAIG-MTPAEVLDVVKAATVKGRGGAGFP 73
ETHPLTWRL + ++Y++ DGYA +KA+ M +++ VK + +KGRGGAGFP
Sbjct 17 ETHPLTWRLREDAQPVWLEEYQSKDGYAAARKALTQMAQDDIVQTVKDSGLKGRGGAGFP 76
Query 74 AGIKWSLMAPNDG-GPRYLICNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEATQG 132
G+KW LM ++ RYL+CNADEMEP T+KDR+LME+LPH L+EGMLI+A L+A +G
Sbjct 77 TGVKWGLMPKDESLNIRYLLCNADEMEPNTWKDRMLMEQLPHLLVEGMLISARALKAYRG 136
Query 133 YIFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETALIN 192
YIF+RGEY++AA+ LN A+++A+A G LG NILG+G++FEL+VHTGAGRYICGEETALIN
Sbjct 137 YIFLRGEYVDAARNLNRAIDEAKAAGLLGKNILGSGFDFELFVHTGAGRYICGEETALIN 196
Query 193 SLEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKDPG 252
SLEGRRANPR+KPPFP G WG+PT VNNVET N+PAI+ G +WY L+ S+D G
Sbjct 197 SLEGRRANPRSKPPFPAAVGVWGKPTCVNNVETLCNVPAIVGNGVDWYKTLARPGSEDMG 256
Query 253 TKIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGLKLKAWLPGGASTDFLAAEHID 312
TK+ G SGKVK PGLWELPFG +ARE+ E++AGGMRDG +LKAW PGGA T FL EH+D
Sbjct 257 TKLMGFSGKVKNPGLWELPFGVSARELFEDYAGGMRDGFQLKAWQPGGAGTGFLLPEHLD 316
Query 313 LPMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWAVK 372
M + I K G+R+GT L M VD++ MVS RN+EEFFARESCGWCTPCRDGLPW+VK
Sbjct 317 AQMFAGGIAKVGTRMGTGLAMAVDDSINMVSLLRNMEEFFARESCGWCTPCRDGLPWSVK 376
Query 373 ALKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKVAKS 432
L+ALE GEG+ D++ L++L L GKTFCAHAPGA+EPL ALKYFR+EFEA +++
Sbjct 377 LLRALERGEGQPGDLETLEQLVNFLGPGKTFCAHAPGAVEPLGSALKYFRAEFEAGISRQ 436
Query 433 P 433
P
Sbjct 437 P 437
>Q89AU2 NADH-quinone oxidoreductase subunit F [Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp)]
Length=444
Score = 534 bits (1376), Expect = 0.0
Identities = 257/430 (60%), Positives = 322/430 (75%), Gaps = 6/430 (1%)
Query 15 ETHPLTWRLSKQEHVRSADDYEALDGYAGFKKAIG-MTPAEVLDVVKAATVKGRGGAGFP 73
ETHPLTWRL+ Q+ +Y+ +GY F+K + MT +V+D++K + +KGRGGAGF
Sbjct 10 ETHPLTWRLNAQQDTVWIKEYKRKNGYRAFEKVVNHMTSEDVIDLIKQSGLKGRGGAGFL 69
Query 74 AGIKWSLMAP-ND--GGPRYLICNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEAT 130
G+KWSLM P ND G RYL+CNADEMEPGT+KDR LMEK+PHQL+EG+LI+A+ L T
Sbjct 70 TGLKWSLMPPLNDEYGYTRYLLCNADEMEPGTYKDRFLMEKVPHQLLEGILISAFALSVT 129
Query 131 QGYIFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETAL 190
+ YIF+RGEY+ + L +++ +A GYLG N+ G+ FE+++HTGAGRYICGEETAL
Sbjct 130 KSYIFLRGEYVNTERILKQSIIEATNYGYLGKNVCGSNLTFEIFIHTGAGRYICGEETAL 189
Query 191 INSLEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKD 250
INSLEGRRANPR KPPFP G WG+PT VNNVET +N+PAI L G +WY GLS KS D
Sbjct 190 INSLEGRRANPRFKPPFPAYVGLWGKPTCVNNVETLSNVPAIFLNGVKWYKGLS--KSLD 247
Query 251 PGTKIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGLKLKAWLPGGASTDFLAAEH 310
GTK+ G SG VKFPG+WELPFG TARE+ E +AGGM++ KLK W PGGAST FL +H
Sbjct 248 TGTKMMGFSGSVKFPGIWELPFGITAREIFERYAGGMKNNKKLKVWQPGGASTSFLIDKH 307
Query 311 IDLPMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWA 370
+D+PMD +I K GSRLGT L M VD++ +VS RN+EEFF+RESCG+CTPCRDGLPW
Sbjct 308 LDVPMDFVNIKKVGSRLGTALAMAVDDSVSIVSLVRNIEEFFSRESCGFCTPCRDGLPWI 367
Query 371 VKALKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKVA 430
VK LK LE G EDI+ L++L +L G+TFCAHAPGA+EPL ALKYFR EFE V
Sbjct 368 VKILKVLEQKIGVPEDIEILEQLCEQLGPGRTFCAHAPGAIEPLKSALKYFRLEFELCVN 427
Query 431 KSPVVQTSHV 440
+ ++ ++
Sbjct 428 SNSTIKCKYI 437
>P57256 NADH-quinone oxidoreductase subunit F [Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS)]
Length=444
Score = 527 bits (1358), Expect = 0.0
Identities = 253/419 (60%), Positives = 318/419 (76%), Gaps = 6/419 (1%)
Query 15 ETHPLTWRLSKQEHVRSADDYEALDGYAGFKKAIG-MTPAEVLDVVKAATVKGRGGAGFP 73
ETHPLTWRL + +Y +GY KKA+ M P +V+++VK + +KGRGGAGF
Sbjct 9 ETHPLTWRLRDDQKTVWIKEYCDKNGYLSLKKALKEMLPEDVINIVKESGLKGRGGAGFS 68
Query 74 AGIKWSLMAPNDGGPR---YLICNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEAT 130
G+KWSLM+ N R YLICNADEMEPGT+KDRLL+EK+PHQLIEG++++AY L +
Sbjct 69 TGLKWSLMSQNHSYTRERGYLICNADEMEPGTYKDRLLIEKIPHQLIEGIILSAYALNVS 128
Query 131 QGYIFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETAL 190
+ YIF+RGEY++A L +++++A G++G NILG+ +N EL +HTGAGRYICGEETAL
Sbjct 129 RAYIFLRGEYVQAEHILKQSIQEAINFGFIGLNILGSNFNIELVLHTGAGRYICGEETAL 188
Query 191 INSLEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKD 250
INSLEGRRANPR+KPPFP V G WG+PT VNNVET +N+P I+L G WY LS KS D
Sbjct 189 INSLEGRRANPRSKPPFPAVFGLWGKPTCVNNVETLSNVPCIILNGVSWYKNLS--KSSD 246
Query 251 PGTKIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGLKLKAWLPGGASTDFLAAEH 310
GTK+ G SG V+ PG+WELPFGTTARE++E++A GM+ G LKAW PGGA TDFL EH
Sbjct 247 TGTKLMGFSGNVRNPGVWELPFGTTAREILEDYAHGMKSGFSLKAWQPGGAGTDFLLEEH 306
Query 311 IDLPMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWA 370
+DLPMD ++I +AGSRLGT L M VD MVS N+E+FF+RESCG CTPCRDGLPW
Sbjct 307 LDLPMDFKNISQAGSRLGTALSMAVDNKTSMVSLVYNIEKFFSRESCGLCTPCRDGLPWI 366
Query 371 VKALKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKV 429
VK LK+LE +G D+++L++L L GKTFCAHAPGA+EPL A+KYFRSEFE+ +
Sbjct 367 VKILKSLEQNKGHKNDVKNLEKLCSHLSPGKTFCAHAPGAIEPLQSAIKYFRSEFESGI 425
>Q8K9Y3 NADH-quinone oxidoreductase subunit F [Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg)]
Length=447
Score = 522 bits (1345), Expect = 0.0
Identities = 253/429 (59%), Positives = 323/429 (75%), Gaps = 5/429 (1%)
Query 15 ETHPLTWRLSKQEHVRSADDYEALDGYAGFKKAIG-MTPAEVLDVVKAATVKGRGGAGFP 73
ETHPLTWRL ++Y +GY KKA+ M P +V+ ++K + +KGRGGAGF
Sbjct 9 ETHPLTWRLRNDRETVWIEEYCKKNGYFSLKKALKTMCPEDVVHLIKESGLKGRGGAGFS 68
Query 74 AGIKWSLMAPNDGGP-RYLICNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEATQG 132
G+KWSLM+ ++ RYL+CNADEMEPGT+KDR LME +PHQLIEGML++A+ L ++G
Sbjct 69 TGLKWSLMSKDNSSKIRYLLCNADEMEPGTYKDRFLMENIPHQLIEGMLLSAFALNVSRG 128
Query 133 YIFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETALIN 192
YIF+RGEYI+A L +++++A G++G NIL +G+NFEL++HTGAGRYICGEETALIN
Sbjct 129 YIFLRGEYIKAEYILKKSIQEAINFGFIGSNILNSGFNFELFLHTGAGRYICGEETALIN 188
Query 193 SLEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKDP- 251
SLEGRRANPR KPPFP V G WG+PT VNNVET +N+P+I+L G WY LS KS D
Sbjct 189 SLEGRRANPRAKPPFPAVFGLWGKPTCVNNVETLSNVPSIVLHGVNWYKKLS--KSTDTT 246
Query 252 GTKIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGLKLKAWLPGGASTDFLAAEHI 311
GTK+ G SGKV PG+WELPFGTTARE++E++A GM+ GL LK+W PGGA TDFL +H+
Sbjct 247 GTKLMGFSGKVNNPGVWELPFGTTAREILEDYARGMKSGLFLKSWQPGGAGTDFLIEKHL 306
Query 312 DLPMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWAV 371
DLPMD SI KAGSRLGT + M VD M+S N+E+FF+RESCG CTPCR+GLPW V
Sbjct 307 DLPMDFTSIAKAGSRLGTAIAMAVDNKTNMISLVCNIEKFFSRESCGLCTPCREGLPWIV 366
Query 372 KALKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKVAK 431
K L++LE EG D+++L+ L L GKTFCAHAPGA+EPL A+KYFR EFEA ++
Sbjct 367 KILESLEKKEGHKNDVKNLERLCLDLSPGKTFCAHAPGAVEPLQSAIKYFRLEFEAGISI 426
Query 432 SPVVQTSHV 440
+ + S++
Sbjct 427 KKLKKCSNI 435
>P56913 NADH-quinone oxidoreductase subunit F 2 [Rhizobium meliloti
(strain 1021)]
Length=421
Score = 419 bits (1078), Expect = 5e-148
Identities = 199/396 (50%), Positives = 278/396 (70%), Gaps = 4/396 (1%)
Query 35 YEALDGYAGFKKAIG-MTPAEVLDVVKAATVKGRGGAGFPAGIKWSLMAPNDGGPRYLIC 93
YEA GY +KA+G TP E++++VK + ++GRGGAGFP G+KWS + G P+YL C
Sbjct 21 YEAGGGYRALRKALGEYTPDEIVELVKESNLRGRGGAGFPTGMKWSFVPKAAGKPKYLCC 80
Query 94 NADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEATQGYIFIRGEYIEAAQYLNEALEQ 153
NADE EPGTFKDR++ME+ PHQLIEG+ ++AY + A Y++IRGEY+ A + + +A+ +
Sbjct 81 NADEGEPGTFKDRIIMERDPHQLIEGLAVSAYAIGAETAYVYIRGEYVTAIRRMEQAIAE 140
Query 154 ARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETALINSLEGRRANPRTKPPFPQVAGA 213
A GYLG ILG+G+NF +++H GAG YICGEETA++ SLEG+RA PR KPPFP VAG
Sbjct 141 AHENGYLGIGILGSGFNFMVHIHRGAGAYICGEETAMLESLEGKRAQPRLKPPFPAVAGL 200
Query 214 WGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKDPGTKIYGASGKVKFPGLWELPFG 273
+ PT++NNVET +P I++RG W+ G+ G + PG K+Y SG+V+ PGL+ELP G
Sbjct 201 YASPTVINNVETLACVPHIVMRGSAWFRGI--GPDRSPGPKLYCLSGQVRKPGLYELPMG 258
Query 274 TTAREVIEEHAGGMRDGLKLKAWLPGGASTDFLAAEHIDLPMDSESIMKAGSRLGTCLLM 333
+ RE++EEHAGG G K+KA +PGG S + +++ MD +S+ AGS LG+ ++
Sbjct 259 ISLRELVEEHAGGPLPGRKVKAVIPGGVSAPVIPEGELEVGMDFDSLTAAGSMLGSAGVV 318
Query 334 VVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWAVKALKALENGEGKMEDIQHLQEL 393
V+D++ CMV + EFF ESCG CTPCR+GL W VK L+ +E GEG+ D++ L+ L
Sbjct 319 VIDDSTCMVKLATRIIEFFHHESCGKCTPCREGLDWTVKVLRRIEAGEGETGDLEQLEML 378
Query 394 TRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKV 429
+ ++ G TFCA GA L ALK+FR+EF A +
Sbjct 379 CKGIF-GNTFCALGDGAAMGLRAALKHFRAEFVAHI 413
>Q9XAQ9 NADH-quinone oxidoreductase subunit F [Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145)]
Length=449
Score = 397 bits (1019), Expect = 1e-138
Identities = 191/397 (48%), Positives = 263/397 (66%), Gaps = 4/397 (1%)
Query 33 DDYEALDGYAGFKKAIGMTPAEVLDVVKAATVKGRGGAGFPAGIKWSLMAPNDGGPRYLI 92
D Y +GY G +KA+ M P +++ VK + ++GRGGAGFP G+KW + DG P YL+
Sbjct 34 DVYRRHEGYEGLRKALAMAPDDLIAYVKESGLRGRGGAGFPTGMKWQFIPQGDGKPHYLV 93
Query 93 CNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEATQGYIFIRGEYIEAAQYLNEALE 152
NADE EPGT KD L+ PH LIEG++IA Y + ++ +I++RGE + + L+EA+
Sbjct 94 VNADESEPGTCKDIPLLFANPHSLIEGIVIACYAIRSSHAFIYLRGEVVPVLRRLHEAVR 153
Query 153 QARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETALINSLEGRRANPRTKPPFPQVAG 212
+A A G+LG+NILG+G + L VH GAG YICGEETAL++SLEGRR PR +PPFP VAG
Sbjct 154 EAYAAGFLGENILGSGLDLTLTVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAG 213
Query 213 AWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKDPGTKIYGASGKVKFPGLWELPF 272
+ PT+VNNVE+ ++PAI+ +G +W+ S G K PG +Y SG V PG +E P
Sbjct 214 LYACPTVVNNVESIASVPAILNKGKDWF--RSMGSEKSPGFTLYSLSGHVAGPGQYEAPL 271
Query 273 GTTAREVIEEHAGGMRDGLKLKAWLPGGASTDFLAAEHIDLPMDSESIMKAGSRLGTCLL 332
G T R+++ + +GGMR G +LK W PGG+ST EH+D+P+D E + AGS LGT L
Sbjct 272 GITLRQLL-DMSGGMRPGHRLKFWTPGGSSTPMFTDEHLDVPLDYEGVGAAGSMLGTKAL 330
Query 333 MVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWAVKALKALENGEGKMEDIQHLQE 392
DET C+V A EF+A ESCG CTPCR+G W V+ L+ +E G+G+M D+ L +
Sbjct 331 QCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYWLVQLLRDIEAGKGQMSDLDKLND 390
Query 393 LTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKV 429
+ + GK+FCA GA P+ +LKYFR E+E +
Sbjct 391 IADNI-NGKSFCALGDGAASPIFSSLKYFREEYEEHI 426
>P9WIV7 NADH-quinone oxidoreductase subunit F [Mycobacterium tuberculosis
(strain ATCC 25618 / H37Rv)]
Length=445
Score = 390 bits (1001), Expect = 5e-136
Identities = 197/416 (47%), Positives = 269/416 (65%), Gaps = 14/416 (3%)
Query 18 PLTWRLSKQEHVRSADDYEALDGYAGFKKAIGMTPAEVLDVVKAATVKGRGGAGFPAGIK 77
P +W L+ + ++ GY +KA+ M P +V+ +VK + ++GRGGAGF G K
Sbjct 19 PESWTLATYQR------HDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGAGFATGTK 72
Query 78 WSLMAPNDGG----PRYLICNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEATQGY 133
WS + D G P YL+ NADE EPGT KD LM PH LIEG++IAAY + A +
Sbjct 73 WSFIPQGDTGAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAAYAIRAHHAF 132
Query 134 IFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETALINS 193
+++RGE + + L+ A+ +A A G+LG NI G+G++ EL VH GAG YICGEETAL++S
Sbjct 133 VYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGAYICGEETALLDS 192
Query 194 LEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKDPGT 253
LEGRR PR +PPFP VAG +G PT++NNVET ++P+I+L G +W+ S G K PG
Sbjct 193 LEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWF--RSMGSEKSPGF 250
Query 254 KIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGLKLKAWLPGGASTDFLAAEHIDL 313
+Y SG V PG +E P G T RE++ ++AGG+R G +LK W PGG+ST L EH+D+
Sbjct 251 TLYSLSGHVTRPGQYEAPLGITLRELL-DYAGGVRAGHRLKFWTPGGSSTPLLTDEHLDV 309
Query 314 PMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWAVKA 373
P+D E + AGS LGT L + DET C+V A R EF+ ESCG CTPCR+G W K
Sbjct 310 PLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCREGTFWLDKI 369
Query 374 LKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKV 429
+ LE G G EDI L +++ + +GK+FCA GA P+M ++K+FR E+ A V
Sbjct 370 YERLETGRGSHEDIDKLLDISDSI-LGKSFCALGDGAASPVMSSIKHFRDEYLAHV 424
>P9WIV6 NADH-quinone oxidoreductase subunit F [Mycobacterium tuberculosis
(strain CDC 1551 / Oshkosh)]
Length=445
Score = 390 bits (1001), Expect = 5e-136
Identities = 197/416 (47%), Positives = 269/416 (65%), Gaps = 14/416 (3%)
Query 18 PLTWRLSKQEHVRSADDYEALDGYAGFKKAIGMTPAEVLDVVKAATVKGRGGAGFPAGIK 77
P +W L+ + ++ GY +KA+ M P +V+ +VK + ++GRGGAGF G K
Sbjct 19 PESWTLATYQR------HDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGAGFATGTK 72
Query 78 WSLMAPNDGG----PRYLICNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEATQGY 133
WS + D G P YL+ NADE EPGT KD LM PH LIEG++IAAY + A +
Sbjct 73 WSFIPQGDTGAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAAYAIRAHHAF 132
Query 134 IFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETALINS 193
+++RGE + + L+ A+ +A A G+LG NI G+G++ EL VH GAG YICGEETAL++S
Sbjct 133 VYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGAYICGEETALLDS 192
Query 194 LEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKDPGT 253
LEGRR PR +PPFP VAG +G PT++NNVET ++P+I+L G +W+ S G K PG
Sbjct 193 LEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWF--RSMGSEKSPGF 250
Query 254 KIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGLKLKAWLPGGASTDFLAAEHIDL 313
+Y SG V PG +E P G T RE++ ++AGG+R G +LK W PGG+ST L EH+D+
Sbjct 251 TLYSLSGHVTRPGQYEAPLGITLRELL-DYAGGVRAGHRLKFWTPGGSSTPLLTDEHLDV 309
Query 314 PMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWAVKA 373
P+D E + AGS LGT L + DET C+V A R EF+ ESCG CTPCR+G W K
Sbjct 310 PLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCREGTFWLDKI 369
Query 374 LKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKV 429
+ LE G G EDI L +++ + +GK+FCA GA P+M ++K+FR E+ A V
Sbjct 370 YERLETGRGSHEDIDKLLDISDSI-LGKSFCALGDGAASPVMSSIKHFRDEYLAHV 424
>P65568 NADH-quinone oxidoreductase subunit F [Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97)]
Length=445
Score = 390 bits (1001), Expect = 5e-136
Identities = 197/416 (47%), Positives = 269/416 (65%), Gaps = 14/416 (3%)
Query 18 PLTWRLSKQEHVRSADDYEALDGYAGFKKAIGMTPAEVLDVVKAATVKGRGGAGFPAGIK 77
P +W L+ + ++ GY +KA+ M P +V+ +VK + ++GRGGAGF G K
Sbjct 19 PESWTLATYQR------HDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGAGFATGTK 72
Query 78 WSLMAPNDGG----PRYLICNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEATQGY 133
WS + D G P YL+ NADE EPGT KD LM PH LIEG++IAAY + A +
Sbjct 73 WSFIPQGDTGAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAAYAIRAHHAF 132
Query 134 IFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETALINS 193
+++RGE + + L+ A+ +A A G+LG NI G+G++ EL VH GAG YICGEETAL++S
Sbjct 133 VYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGAYICGEETALLDS 192
Query 194 LEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKDPGT 253
LEGRR PR +PPFP VAG +G PT++NNVET ++P+I+L G +W+ S G K PG
Sbjct 193 LEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWF--RSMGSEKSPGF 250
Query 254 KIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGLKLKAWLPGGASTDFLAAEHIDL 313
+Y SG V PG +E P G T RE++ ++AGG+R G +LK W PGG+ST L EH+D+
Sbjct 251 TLYSLSGHVTRPGQYEAPLGITLRELL-DYAGGVRAGHRLKFWTPGGSSTPLLTDEHLDV 309
Query 314 PMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWAVKA 373
P+D E + AGS LGT L + DET C+V A R EF+ ESCG CTPCR+G W K
Sbjct 310 PLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCREGTFWLDKI 369
Query 374 LKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKV 429
+ LE G G EDI L +++ + +GK+FCA GA P+M ++K+FR E+ A V
Sbjct 370 YERLETGRGSHEDIDKLLDISDSI-LGKSFCALGDGAASPVMSSIKHFRDEYLAHV 424
>Q56222 NADH-quinone oxidoreductase subunit 1 [Thermus thermophilus
(strain ATCC 27634 / DSM 579 / HB8)]
Length=438
Score = 380 bits (977), Expect = 2e-132
Identities = 200/411 (49%), Positives = 276/411 (67%), Gaps = 10/411 (2%)
Query 33 DDYEALDGYAGFKKAIG-MTPAEVLDVVKAATVKGRGGAGFPAGIKWSLMAPNDGGPRYL 91
D Y GY K+ + TP EV++ VK + ++GRGGAGFP G+KWS M +DG YL
Sbjct 30 DYYLRHGGYETAKRVLKEKTPDEVIEEVKRSGLRGRGGAGFPTGLKWSFMPKDDGKQHYL 89
Query 92 ICNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEATQGYIFIRGEYIEAAQYLNEAL 151
ICNADE EPG+FKDR ++E +PH LIEGM++A Y + AT GYI++RGEY AA L +A+
Sbjct 90 ICNADESEPGSFKDRYILEDVPHLLIEGMILAGYAIRATVGYIYVRGEYRRAADRLEQAI 149
Query 152 EQARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETALINSLEGRRANPRTKPPFPQVA 211
++ARA+GYLG N+ GT ++F+L+VH GAG YICGEETAL+NSLEG RANPR KPPFP +
Sbjct 150 KEARARGYLGKNLFGTDFSFDLHVHRGAGAYICGEETALMNSLEGLRANPRLKPPFPAQS 209
Query 212 GAWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKDPGTKIYGASGKVKFPGLWELP 271
G WG+PT +NNVET ++ IM RG +W+ + +SK G K+Y SG VK PG++ELP
Sbjct 210 GLWGKPTTINNVETLASVVPIMERGADWFAQMGTEQSK--GMKLYQISGPVKRPGVYELP 267
Query 272 FGTTAREVIEEHAGGMRDGLKLKAWLPGGASTDFL--AAEHIDLPMDSESIMKAGSRLGT 329
GTT RE+I E AGG + ++A +PGG+ST L E +D PM E + GS LGT
Sbjct 268 MGTTFRELIYEWAGGPLE--PIQAIIPGGSSTPPLPFTEEVLDTPMSYEHLQAKGSMLGT 325
Query 330 CLLMVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLP-WAVKALKALENGEGKMEDIQ 388
++++ E MV A NL F+A ESCG CTPCR+G+ + V + G+G+ +D++
Sbjct 326 GGVILIPERVSMVDAMWNLTRFYAHESCGKCTPCREGVAGFMVNLFAKIGTGQGEEKDVE 385
Query 389 HLQELTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKV-AKSPVVQTS 438
+L+ L L G++FC A A+ P+ G+L++F+ ++ A K PV + S
Sbjct 386 NLEALL-PLIEGRSFCPLADAAVWPVKGSLRHFKDQYLALAREKRPVPRPS 435
>Q46507 NADP-reducing hydrogenase subunit HndC [Solidesulfovibrio
fructosivorans]
Length=490
Score = 339 bits (869), Expect = 1e-115
Identities = 172/399 (43%), Positives = 249/399 (62%), Gaps = 4/399 (1%)
Query 31 SADDYEALDGYAGFKKAIGMTPAEVLDVVKAATVKGRGGAGFPAGIKWSLMAPNDGGPRY 90
S DDY AL GY G K + MTPAEV+D+VK + ++GRGGAGFP GIKW + N +Y
Sbjct 25 SIDDYIALRGYEGLAKVLTMTPAEVVDLVKRSGLRGRGGAGFPTGIKWGIALGNKADQKY 84
Query 91 LICNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEATQGYIFIRGEYIEAAQYLNEA 150
++CNADE +P F DR ++E PH ++E M I Y + AT+G ++IR EY A + L +A
Sbjct 85 MVCNADEGDP-EFMDRAVLEGDPHSVVEAMAIGGYAIGATRGTVYIRAEYPLAIKRLKKA 143
Query 151 LEQARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETALINSLEGRRANPRTKPPFPQV 210
++ AR G LG+NI G+G++F++ + GAG ++CGEETALI S+EG+R P TKPPFP
Sbjct 144 IDDAREYGLLGENIFGSGFDFDIELKYGAGAFVCGEETALIRSMEGKRGEPVTKPPFPAQ 203
Query 211 AGAWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKDPGTKIYGASGKVKFPGLWEL 270
+G W +PTIVNNVET+ N+PAI++ G +W+ G+ SK GTK++ +GK++ GL E+
Sbjct 204 SGYWEKPTIVNNVETFANIPAIIINGADWFSGIGTATSK--GTKVFALAGKIQNVGLIEV 261
Query 271 PFGTTAREVIEEHAGGMRDGLKLKAWLPGGASTDFLAAEHIDLPMDSESIMKAGSRLGTC 330
P G + REVI + GG DG KA GG S LA + +D+ +D ES+ S +G+
Sbjct 262 PMGISLREVIFDIGGGCPDGKAFKAVQTGGPSGGALANKDLDVAIDYESLAACKSIMGSG 321
Query 331 LLMVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWAVKALKALENGEGKMEDIQHL 390
++V+DE CMVS + +F E+CG CTPCR G + L + G+G D+ L
Sbjct 322 GMVVMDEDDCMVSVAKFFLDFTMDETCGKCTPCRIGSKRLYEILDRITKGKGTRADLDRL 381
Query 391 QELTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKV 429
+ L+ ++ C P++ + F +E+EA V
Sbjct 382 KSLS-EIIKDTALCGLGQTMPNPILSTMDTFANEYEAHV 419
>P29913 NADH-quinone oxidoreductase chain 1 [Paracoccus denitrificans]
Length=431
Score = 333 bits (853), Expect = 6e-114
Identities = 171/379 (45%), Positives = 242/379 (64%), Gaps = 6/379 (2%)
Query 54 EVLDVVKAATVKGRGGAGFPAGIKWSLMAP-NDGGPRYLICNADEMEPGTFKDRLLMEKL 112
+++D +KA+ ++GRGGAGFP G+KWS M +DG P YL+ NADE EP T KDR +M
Sbjct 42 KIIDEMKASGLRGRGGAGFPTGMKWSFMPKESDGRPSYLVINADESEPATCKDREIMRHD 101
Query 113 PHQLIEGMLIAAYTLEATQGYIFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWNFE 172
PH LIEG LIA++ + A YI+IRGE+I + L A+++ G LG N G+GW+F+
Sbjct 102 PHTLIEGALIASFAMGAHAAYIYIRGEFIREREALQAAIDECYDAGLLGRNAAGSGWDFD 161
Query 173 LYVHTGAGRYICGEETALINSLEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAI 232
LY+H GAG YICGEETAL+ SLEG++ PR KPPFP AG +G PT VNNVE+ +P I
Sbjct 162 LYLHHGAGAYICGEETALLESLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTI 221
Query 233 MLRGPEWYIGLSAGKSKDPGTKIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGLK 292
+ RG EW+ S G+ + G K++G +G V P + E RE+IE+H GG+R G K
Sbjct 222 LRRGAEWF--ASFGRPNNAGVKLFGLTGHVNTPCVVEEAMSIPMRELIEKHGGGIRGGWK 279
Query 293 -LKAWLPGGASTDFLAAEHID-LPMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNLEE 350
LKA +PGGAS L AE + MD + + S GT ++V+D++ +V A L +
Sbjct 280 NLKAVIPGGASCPVLTAEQCENAIMDYDGMRDVRSSFGTACMIVMDQSTDVVKAIWRLSK 339
Query 351 FFARESCGWCTPCRDGLPWAVKALKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAPGA 410
FF ESCG CTPCR+G W ++ ++ L G+ ++E+I L ++T+++ G T CA A
Sbjct 340 FFKHESCGQCTPCREGTGWMMRVMERLVRGDAEVEEIDMLFDVTKQV-EGHTICALGDAA 398
Query 411 MEPLMGALKYFRSEFEAKV 429
P+ G ++ FR E E ++
Sbjct 399 AWPIQGLIRNFREEIEDRI 417
>P24917 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
[Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987)]
Length=493
Score = 330 bits (845), Expect = 6e-112
Identities = 171/383 (45%), Positives = 238/383 (62%), Gaps = 9/383 (2%)
Query 55 VLDVVKAATVKGRGGAGFPAGIKWSLMA----PNDGGPRYLICNADEMEPGTFKDRLLME 110
++ VKA+ ++GRGGAGFP+G+KWS M D PRYL+ NADE EPGT KDR +M
Sbjct 85 IIGEVKASGLRGRGGAGFPSGLKWSFMNFKDWDKDDKPRYLVVNADEGEPGTCKDREIMR 144
Query 111 KLPHQLIEGMLIAAYTLEATQGYIFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWN 170
K PH+L+EG L+A + AT YI+IRGE+I+ A L A+ +A A G +G N G+G++
Sbjct 145 KDPHKLVEGCLVAGRAMNATAAYIYIRGEFIQEAAILQNAINEAYADGLIGKNACGSGYD 204
Query 171 FELYVHTGAGRYICGEETALINSLEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLP 230
F++Y+H GAG Y+CGEET+LI SLEG+ PR KPPFP G +G P+ V NVET P
Sbjct 205 FDVYLHRGAGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETVAVAP 264
Query 231 AIMLRGPEWYIGLSAGKSKDPGTKIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDG 290
I RG W+ G G+ ++ GTK++ SG V P E RE+I++H GG+R G
Sbjct 265 TICRRGGNWFAGF--GRERNQGTKLFCISGHVNNPCTVEEEMSIPMRELIDKHCGGVRGG 322
Query 291 L-KLKAWLPGGASTDFLAAEHIDLP-MDSESIMKAGSRLGTCLLMVVDETQCMVSATRNL 348
L A +PGG+ST L D MD +++ + S LGT L+V+D++ +V A L
Sbjct 323 WDNLLAVIPGGSSTPILPKHICDTQLMDFDALKDSQSGLGTAALIVMDKSTDVVRAISRL 382
Query 349 EEFFARESCGWCTPCRDGLPWAVKALKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAP 408
F+ ESCG CTPCR+G W + +K E G+G+ +I LQELT+++ G T CA
Sbjct 383 SHFYRHESCGQCTPCREGSKWTEQIMKRFEKGQGREREIDMLQELTKQV-EGHTICALGE 441
Query 409 GAMEPLMGALKYFRSEFEAKVAK 431
P+ G +++FR E EA++ K
Sbjct 442 AFAWPIQGLIRHFRPELEARIRK 464
Score = 19.2 bits (38), Expect = 5.0
Identities = 6/11 (55%), Positives = 9/11 (82%), Gaps = 0/11 (0%)
Query 232 IMLRGPEWYIG 242
I+L+G +W IG
Sbjct 77 ILLKGHDWIIG 87
>O07948 NADH-quinone oxidoreductase subunit F [Rhodobacter capsulatus]
Length=431
Score = 320 bits (821), Expect = 4e-109
Identities = 169/406 (42%), Positives = 247/406 (61%), Gaps = 8/406 (2%)
Query 28 HVRSADDYEALDGYAGFKKAIGMTPAEVLDVVKAATVKGRGGAGFPAGIKWSLMAP-NDG 86
H RS A + G +G +++ VKA+ ++GRGGAGFP G+KWS M +DG
Sbjct 16 HDRSLKGAMARGHWDGTAAILGNGRDWIIEQVKASGLRGRGGAGFPTGLKWSFMPKQSDG 75
Query 87 GPRYLICNADEMEPGTFKDRLLMEKLPHQLIEGMLIAAYTLEATQGYIFIRGEYIEAAQY 146
P +L+ NADE EPGT KDR +M PH LIEG LIA + + A YI+IRGEY+ +
Sbjct 76 RPSFLVINADESEPGTCKDREIMRHDPHTLIEGALIAGFAMGARAAYIYIRGEYVREKEA 135
Query 147 LNEALEQARAKGYLGDNILGTGWNFELYVHTGAGRYICGEETALINSLEGRRANPRTKPP 206
L A+++ G +G N + ++F++Y+H GAG YICGEETAL+ SLEG++ PR KPP
Sbjct 136 LQAAIDECYEAGLIGKNACRSDYDFDVYLHHGAGAYICGEETALLESLEGKKGMPRMKPP 195
Query 207 FPQVAGAWGRPTIVNNVETYNNLPAIMLRGPEWYIGLSAGKSKDPGTKIYGASGKVKFPG 266
FP +G +G PT VNNVE+ +P I+ RG W+ G+ G+ + G K++ SG V P
Sbjct 196 FPAGSGLYGCPTTVNNVESIAVVPTILRRGGAWFAGI--GRPNNTGVKLFAMSGHVNTPC 253
Query 267 LWELPFGTTAREVIEEHAGGMRDGLK-LKAWLPGGASTDFLAAEHI--DLPMDSESIMKA 323
+ E + +E+IE+H GG+R G K LKA +PGGAS + A H+ D MD + + +
Sbjct 254 VVEEAMSISMKELIEKHGGGVRGGWKNLKAVIPGGASCPVIPA-HLCEDAIMDYDGMREK 312
Query 324 GSRLGTCLLMVVDETQCMVSATRNLEEFFARESCGWCTPCRDGLPWAVKALKALENGEGK 383
S GT L+V+D+ ++ A L +FF ESCG CTPCR+G W + ++ L GE +
Sbjct 313 QSSFGTACLIVMDQQTDIIKAIARLSKFFKHESCGQCTPCREGTSWMWRVMERLVTGEAE 372
Query 384 MEDIQHLQELTRKLWIGKTFCAHAPGAMEPLMGALKYFRSEFEAKV 429
+E+I L +T+++ G T CA A P+ G ++++R E E ++
Sbjct 373 VEEIDMLFSVTKQV-EGHTICALGDAAAWPIQGLIRHYREEIEDRI 417
>A8GQT6 NADH-quinone oxidoreductase subunit F [Rickettsia rickettsii
(strain Sheila Smith)]
Length=421
Score = 316 bits (810), Expect = 1e-107
Identities = 164/382 (43%), Positives = 237/382 (62%), Gaps = 4/382 (1%)
Query 55 VLDVVKAATVKGRGGAGFPAGIKWSLMAPNDGGPRYLICNADEMEPGTFKDRLLMEKLPH 114
+++ VK + ++GRGGAGF G+KWS M N YL+ NADE EPGT KDR ++ PH
Sbjct 43 IVEEVKKSGLRGRGGAGFSTGMKWSFMPKNLEKSCYLVVNADESEPGTCKDRDILRFEPH 102
Query 115 QLIEGMLIAAYTLEATQGYIFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWNFELY 174
+LIEG L+A++ + A YI+IRGE+ A + AL++A +G +G N G+G++ +Y
Sbjct 103 KLIEGCLLASFAIGANNCYIYIRGEFYNEASNIQRALDEAYKEGLIGKNSCGSGFDCNIY 162
Query 175 VHTGAGRYICGEETALINSLEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAIML 234
+H GAG YICGEETAL+ SLEG++ PR KPPFP G +G PT +NNVE+ +P I+
Sbjct 163 LHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILR 222
Query 235 RGPEWYIGLSAGKSKDPGTKIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGL-KL 293
RG W+ G+ GK + GTKI+ SG V P E G + +E+IE++AGG+R G L
Sbjct 223 RGASWFAGI--GKPNNTGTKIFCISGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNL 280
Query 294 KAWLPGGASTDFLAAEHIDLPMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNLEEFFA 353
KA +PGG+S L ++ MD +S+ AGS LGT ++V+D++ ++ A L +F+
Sbjct 281 KAIIPGGSSVPLLPKSLCEVDMDFDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLSKFYM 340
Query 354 RESCGWCTPCRDGLPWAVKALKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAPGAMEP 413
ESCG CTPCR+G W + + L G +I L +T+ + G T CA A P
Sbjct 341 HESCGQCTPCREGTGWMWRVMMRLVKGNVTKSEIDELLNVTKAI-EGHTICALGDAAAWP 399
Query 414 LMGALKYFRSEFEAKVAKSPVV 435
+ G +++FRSE EA++ VV
Sbjct 400 IQGLIRHFRSEIEARIKSYSVV 421
>Q54I90 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Dictyostelium discoideum]
Length=479
Score = 312 bits (800), Expect = 2e-105
Identities = 163/379 (43%), Positives = 235/379 (62%), Gaps = 7/379 (2%)
Query 55 VLDVVKAATVKGRGGAGFPAGIKWSLM--APNDGGPRYLICNADEMEPGTFKDRLLMEKL 112
+L + A+ ++GRGGAGFP+G+KWS M + P+YL+ NADE EPGT KDR +M
Sbjct 92 ILKEMMASGLRGRGGAGFPSGLKWSFMPKTTSKDRPQYLVINADEGEPGTCKDREIMRHD 151
Query 113 PHQLIEGMLIAAYTLEATQGYIFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWNFE 172
PH+LIEG L+A + + A YI+IRGE+ A+ L +A+++A G +G+N GTG+ F+
Sbjct 152 PHKLIEGCLLAGFAMRACAAYIYIRGEFHYEAKVLEQAIDEAYKAGLIGENACGTGYKFD 211
Query 173 LYVHTGAGRYICGEETALINSLEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAI 232
+YVH GAG YICGEETALI S+EG++ PR KPPFP +AG +G PT V NVET P I
Sbjct 212 VYVHRGAGAYICGEETALIESIEGKQGKPRLKPPFPAMAGLYGCPTTVTNVETVAVAPTI 271
Query 233 MLRGPEWYIGLSAGKSKDPGTKIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGL- 291
+ RG W+ S G+ K+ GTK++ SG V P E RE+I++H GG+ G
Sbjct 272 LRRGGAWF--ASFGRPKNAGTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVIGGWD 329
Query 292 KLKAWLPGGASTDFLAAEHID-LPMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNLEE 350
LK +PGG+S L D + MD + + + S LGT ++V+++ M++A L +
Sbjct 330 NLKGVIPGGSSVPVLPKNICDNVLMDFDDLRQHRSGLGTAAVIVMNKETDMIAAIARLSK 389
Query 351 FFARESCGWCTPCRDGLPWAVKALKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAPGA 410
F+ ESCG CTPCR+G+ W L G K ++I L+E++R++ G T CA A
Sbjct 390 FYKHESCGQCTPCREGVGWLYDITDRLVTGNAKPDEIDSLEEISRQI-EGHTICALGDAA 448
Query 411 MEPLMGALKYFRSEFEAKV 429
P+ G +++FR E E ++
Sbjct 449 AWPVQGLIRHFRPEIEDRI 467
>P49821 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
[Homo sapiens]
Length=464
Score = 310 bits (794), Expect = 1e-104
Identities = 160/383 (42%), Positives = 235/383 (61%), Gaps = 6/383 (2%)
Query 52 PAEVLDVVKAATVKGRGGAGFPAGIKWSLM-APNDGGPRYLICNADEMEPGTFKDRLLME 110
P +L +K + ++GRGGAGFP G+KWS M P+DG P+YL+ NADE EPGT KDR ++
Sbjct 73 PDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILR 132
Query 111 KLPHQLIEGMLIAAYTLEATQGYIFIRGEYIEAAQYLNEALEQARAKGYLGDNILGTGWN 170
PH+L+EG L+ + A YI+IRGE+ A L A+ +A G +G N G+G++
Sbjct 133 HDPHKLLEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYD 192
Query 171 FELYVHTGAGRYICGEETALINSLEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLP 230
F+++V GAG YICGEETALI S+EG++ PR KPPFP G +G PT V NVET P
Sbjct 193 FDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSP 252
Query 231 AIMLRGPEWYIGLSAGKSKDPGTKIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDG 290
I RG W+ G G+ ++ GTK++ SG V P E +E+IE+HAGG+ G
Sbjct 253 TICRRGGTWFAGF--GRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGG 310
Query 291 L-KLKAWLPGGASTDFLAAEHID-LPMDSESIMKAGSRLGTCLLMVVDETQCMVSATRNL 348
L A +PGG+ST + + + MD +++++A + LGT ++V+D + +V A L
Sbjct 311 WDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARL 370
Query 349 EEFFARESCGWCTPCRDGLPWAVKALKALENGEGKMEDIQHLQELTRKLWIGKTFCAHAP 408
EF+ ESCG CTPCR+G+ W K + G+ + +I L E+++++ G T CA
Sbjct 371 IEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQI-EGHTICALGD 429
Query 409 GAMEPLMGALKYFRSEFEAKVAK 431
GA P+ G +++FR E E ++ +
Sbjct 430 GAAWPVQGLIRHFRPELEERMQR 452
Score = 22.3 bits (46), Expect = 0.54
Identities = 10/29 (34%), Positives = 17/29 (59%), Gaps = 4/29 (14%)
Query 232 IMLRGPEWYIGLSAGKSKDPGTKIYGASG 260
I+L+GP+W + G+ K G + G +G
Sbjct 68 ILLKGPDWIL----GEIKTSGLRGRGGAG 92
Score = 19.2 bits (38), Expect = 4.9
Identities = 7/19 (37%), Positives = 9/19 (47%), Gaps = 0/19 (0%)
Query 8 IYGDGNPETHPLTWRLSKQ 26
+ GD P W +SKQ
Sbjct 400 VRGDARPAEIDSLWEISKQ 418
Lambda K H a alpha
0.319 0.137 0.427 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2939538
Database: 4ffb1e26dce661489bf89426f1bb3dbd.SwissProt.fasta
Posted date: May 8, 2024 12:00 PM
Number of letters in database: 8,525
Number of sequences in database: 19
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
