BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 5ec4f9a48dc4ebaf4419358f92688fc7.SwissProt.fasta
20 sequences; 3,798 total letters
Query= ACIAD0739
Length=174
Score E
Sequences producing significant alignments: (Bits) Value
Q9I0J3 NADH-quinone oxidoreductase subunit J [Pseudomonas aerugin... 182 4e-63
P0AFE1 NADH-quinone oxidoreductase subunit J [Escherichia coli O6... 176 2e-60
P0AFE2 NADH-quinone oxidoreductase subunit J [Escherichia coli O1... 176 2e-60
P0AFE3 NADH-quinone oxidoreductase subunit J [Shigella flexneri] 176 2e-60
P0AFE0 NADH-quinone oxidoreductase subunit J [Escherichia coli (s... 176 2e-60
Q8K9X9 NADH-quinone oxidoreductase subunit J [Buchnera aphidicola... 146 9e-49
P57260 NADH-quinone oxidoreductase subunit J [Buchnera aphidicola... 126 8e-41
Q89AT8 NADH-quinone oxidoreductase subunit J [Buchnera aphidicola... 95.1 1e-28
P50975 NADH-quinone oxidoreductase subunit J [Rhodobacter capsula... 91.7 5e-27
P29922 NADH-quinone oxidoreductase chain 10 [Paracoccus denitrifi... 87.0 3e-25
Q4UK29 NADH-quinone oxidoreductase subunit J [Rickettsia felis (s... 84.7 3e-24
Q68VV9 NADH-quinone oxidoreductase subunit J [Rickettsia typhi (s... 82.4 2e-23
P48924 NADH-ubiquinone oxidoreductase chain 6 [Chondrus crispus] 81.6 4e-23
P26523 NAD(P)H-quinone oxidoreductase chain 6 [Synechocystis sp. ... 78.6 5e-22
O47498 NADH-ubiquinone oxidoreductase chain 6 [Metridium senile] 78.2 8e-22
O63849 NADH-ubiquinone oxidoreductase chain 6 [Sarcophyton glaucum] 77.4 1e-21
Q8PU61 F(420)H(2) dehydrogenase subunit J [Methanosarcina mazei (... 76.3 2e-21
Q56225 NADH-quinone oxidoreductase subunit 10 [Thermus thermophil... 73.6 3e-20
P26850 NADH-ubiquinone oxidoreductase chain 6 [Marchantia polymor... 72.8 8e-20
Q02500 NADH-ubiquinone oxidoreductase chain 6 [Triticum aestivum] 61.6 2e-15
>Q9I0J3 NADH-quinone oxidoreductase subunit J [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=166
Score = 182 bits (463), Expect = 4e-63
Identities = 97/165 (59%), Positives = 128/165 (78%), Gaps = 2/165 (1%)
Query 1 MMWPFYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYA 60
M + FY A VA+++T+RV+TN+NPVHALL LI+SLLA++ F +GAPFAGALEIIVYA
Sbjct 1 MEFAFYFAAGVAVLATLRVITNSNPVHALLYLIISLLAISMTFFSLGAPFAGALEIIVYA 60
Query 61 GAIMVLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAGH 120
GAIMVLFVFVVMMLNLG VEQERKWLT W P+ ++ +L + L+ +L+ T +G
Sbjct 61 GAIMVLFVFVVMMLNLGPAVVEQERKWLTPGIWVGPSALALVLLVELLVVLA--RTPSGA 118
Query 121 VLGREVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKRE 165
+G + KAVG +L+ YLL+VE+A+MLLLAALVAA+HLG+++
Sbjct 119 GIGHTTVDAKAVGISLYGPYLLVVELASMLLLAALVAAYHLGRQD 163
>P0AFE1 NADH-quinone oxidoreductase subunit J [Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=184
Score = 176 bits (447), Expect = 2e-60
Identities = 92/165 (56%), Positives = 122/165 (74%), Gaps = 3/165 (2%)
Query 1 MMWPFYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYA 60
M + FY+ L+AI++T+RV+T+TNPVHALL LI+SLLA++G+F +GA FAGALEIIVYA
Sbjct 1 MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYA 60
Query 61 GAIMVLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAGH 120
GAIMVLFVFVVMMLNLG +EQER+WL + W PA++S ++ + +V+ + G
Sbjct 61 GAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILG---VNDQ 117
Query 121 VLGREVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKRE 165
+ I KAVG LF Y+L VE+A+MLLLA LV AFH+G+ E
Sbjct 118 GIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREE 162
>P0AFE2 NADH-quinone oxidoreductase subunit J [Escherichia coli
O157:H7]
Length=184
Score = 176 bits (447), Expect = 2e-60
Identities = 92/165 (56%), Positives = 122/165 (74%), Gaps = 3/165 (2%)
Query 1 MMWPFYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYA 60
M + FY+ L+AI++T+RV+T+TNPVHALL LI+SLLA++G+F +GA FAGALEIIVYA
Sbjct 1 MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYA 60
Query 61 GAIMVLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAGH 120
GAIMVLFVFVVMMLNLG +EQER+WL + W PA++S ++ + +V+ + G
Sbjct 61 GAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILG---VNDQ 117
Query 121 VLGREVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKRE 165
+ I KAVG LF Y+L VE+A+MLLLA LV AFH+G+ E
Sbjct 118 GIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREE 162
>P0AFE3 NADH-quinone oxidoreductase subunit J [Shigella flexneri]
Length=184
Score = 176 bits (447), Expect = 2e-60
Identities = 92/165 (56%), Positives = 122/165 (74%), Gaps = 3/165 (2%)
Query 1 MMWPFYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYA 60
M + FY+ L+AI++T+RV+T+TNPVHALL LI+SLLA++G+F +GA FAGALEIIVYA
Sbjct 1 MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYA 60
Query 61 GAIMVLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAGH 120
GAIMVLFVFVVMMLNLG +EQER+WL + W PA++S ++ + +V+ + G
Sbjct 61 GAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILG---VNDQ 117
Query 121 VLGREVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKRE 165
+ I KAVG LF Y+L VE+A+MLLLA LV AFH+G+ E
Sbjct 118 GIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREE 162
>P0AFE0 NADH-quinone oxidoreductase subunit J [Escherichia coli
(strain K12)]
Length=184
Score = 176 bits (447), Expect = 2e-60
Identities = 92/165 (56%), Positives = 122/165 (74%), Gaps = 3/165 (2%)
Query 1 MMWPFYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYA 60
M + FY+ L+AI++T+RV+T+TNPVHALL LI+SLLA++G+F +GA FAGALEIIVYA
Sbjct 1 MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYA 60
Query 61 GAIMVLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAGH 120
GAIMVLFVFVVMMLNLG +EQER+WL + W PA++S ++ + +V+ + G
Sbjct 61 GAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILG---VNDQ 117
Query 121 VLGREVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKRE 165
+ I KAVG LF Y+L VE+A+MLLLA LV AFH+G+ E
Sbjct 118 GIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREE 162
>Q8K9X9 NADH-quinone oxidoreductase subunit J [Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg)]
Length=163
Score = 146 bits (368), Expect = 9e-49
Identities = 78/165 (47%), Positives = 114/165 (69%), Gaps = 3/165 (2%)
Query 1 MMWPFYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYA 60
M + FY +L+A+IST+ V+ N V++LL LI+SLL+++GIF I GA FAGALE+++YA
Sbjct 1 MEFVFYACSLIAVISTLLVIIQKNAVYSLLYLIISLLSISGIFFIFGAFFAGALEVVIYA 60
Query 61 GAIMVLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAGH 120
GAI+VLFVFV+MMLNLG+ QE+K+L W P+ +S +L L + + + +
Sbjct 61 GAIIVLFVFVIMMLNLGKKNDLQEKKYLNPIFWIGPSFLSLILFLLMTYAI---FFVKDK 117
Query 121 VLGREVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKRE 165
+ +I K VG LF YLLLVE++++LLL+ALV FH+GK +
Sbjct 118 QIYFSLIDVKEVGINLFGPYLLLVELSSLLLLSALVVVFHIGKEK 162
>P57260 NADH-quinone oxidoreductase subunit J [Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS)]
Length=170
Score = 126 bits (316), Expect = 8e-41
Identities = 67/162 (41%), Positives = 107/162 (66%), Gaps = 3/162 (2%)
Query 1 MMWPFYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYA 60
M + FY+ + A++ST V+ N V++L+ LI+SLL++AG+F +GA FAG+LE+I+YA
Sbjct 1 MEFVFYVCSFAAVVSTFFVIIQKNAVYSLVYLIISLLSIAGVFFSLGAFFAGSLEVIIYA 60
Query 61 GAIMVLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAGH 120
GAI+VLFVFV+MMLN+ +E +L W P+++S +L L++ + + +
Sbjct 61 GAIIVLFVFVIMMLNISDKYNLEEAHYLKPRFWIGPSILSLILLLSMTYAI---FFLRDK 117
Query 121 VLGREVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLG 162
+ +I K VG LF Y+ LVE++++LLL+ALV FH+G
Sbjct 118 KIDGFLIDSKIVGINLFGPYVFLVELSSILLLSALVVIFHIG 159
>Q89AT8 NADH-quinone oxidoreductase subunit J [Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp)]
Length=164
Score = 95.1 bits (235), Expect = 1e-28
Identities = 56/160 (35%), Positives = 97/160 (61%), Gaps = 4/160 (3%)
Query 5 FYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
FY +L I+ T+ + + N +++LL LI+S + + +F +GA FA ALE+I+YAGAIM
Sbjct 5 FYSSSLATIVFTVCSIFSRNLMYSLLYLILSFVFTSCVFFSLGATFAAALEVIIYAGAIM 64
Query 65 VLFVFVVMMLNLGRHTVEQERKWLTSETWAVPAL-MSFLLGLTLVWMLSGEYTTAGHVLG 123
VLFVF +MM N + T+ E+ + + + + L + +L ++LS Y +
Sbjct 65 VLFVFFIMMFNFKKSTLYAEKIFDKNNYYYINFLFLLCILIFPFFFILSYLYKEKIFYM- 123
Query 124 REVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGK 163
V+ K V LF+ Y+L++E+++++LL+AL+ H+GK
Sbjct 124 --VVSTKLVAIKLFSDYILVIELSSIVLLSALIIVSHIGK 161
>P50975 NADH-quinone oxidoreductase subunit J [Rhodobacter capsulatus]
Length=202
Score = 91.7 bits (226), Expect = 5e-27
Identities = 61/166 (37%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
Query 2 MWPFYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAG 61
++ FYL A+VA+++ + VV + NPVHA+L LI++ L+ AG+F+++GA F L IIVY G
Sbjct 5 VFAFYLFAVVAVVAGLMVVLSKNPVHAVLWLILTFLSAAGLFVLMGAEFVAMLLIIVYVG 64
Query 62 AIMVLFVFVVMMLNLGRHTVEQE--RKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAG 119
A+ VLF+FVVMML++ + + R A+ L GL +VW +
Sbjct 65 AVAVLFLFVVMMLDIDFAALRGQLVRYAPVGGLIALVMLAQLATGL-MVWNTADAANGLR 123
Query 120 HVLGRE-VIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKR 164
E V A+G L+ YL L + A ++LL A++ A L R
Sbjct 124 AAPAPEGVENTAALGMILYDRYLYLFQGAGLVLLVAMIGAILLTLR 169
>P29922 NADH-quinone oxidoreductase chain 10 [Paracoccus denitrificans]
Length=200
Score = 87.0 bits (214), Expect = 3e-25
Identities = 53/166 (32%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
Query 1 MMWPFYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYA 60
M + FYL A+ A ++ VV NPVH++L LI++ L+ AG+F++ GA F L ++VY
Sbjct 2 MTFAFYLFAISACVAGFMVVIGRNPVHSVLWLILAFLSAAGLFVLQGAEFVAMLLVVVYV 61
Query 61 GAIMVLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLV-WMLSGE-YTTA 118
GA+ VLF+FVVMML++ ++ E + ++ LG+ W S + +
Sbjct 62 GAVAVLFLFVVMMLDVDFAELKGELARYLPLALVIGVVLLAQLGIAFSGWTPSDQAESLR 121
Query 119 GHVLGREVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKR 164
+ V +G L+ Y+L+ ++A ++LL A++ A L R
Sbjct 122 AAPVDAAVENTLGLGLVLYDRYVLMFQLAGLVLLVAMIGAIVLTMR 167
Score = 20.0 bits (40), Expect = 0.35
Identities = 9/38 (24%), Positives = 22/38 (58%), Gaps = 1/38 (3%)
Query 60 AGAIMVLFVFVVMMLNLGRHTVEQERKWLTSETWAVPA 97
AG ++++ + ++L + RH + +R+ + + W PA
Sbjct 150 AGLVLLVAMIGAIVLTM-RHRKDVKRQNVLEQMWRDPA 186
>Q4UK29 NADH-quinone oxidoreductase subunit J [Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2)]
Length=205
Score = 84.7 bits (208), Expect = 3e-24
Identities = 47/171 (27%), Positives = 99/171 (58%), Gaps = 2/171 (1%)
Query 5 FYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
FYL A + IS++ VV + N V+++L LI + + AG+ +++GA F + I++Y GA+
Sbjct 5 FYLFATLITISSLCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYVGAVA 64
Query 65 VLFVFVVMMLNLG-RHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEY-TTAGHVL 122
VLF+FV+MML++ T+ Q ++ L ++ + + L+ + L+ + + + +
Sbjct 65 VLFLFVIMMLDMHFNKTITQLKENLALSSFIALIMFADLVTIILLGTKNINFISDVSFTI 124
Query 123 GREVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKREPSATEGQE 173
++ KA+G+ L+T ++L ++A ++L A++A L ++ + Q+
Sbjct 125 TNDISNTKAIGKVLYTDFMLPFQMAGLILFVAMIACITLTLKKREGVKHQD 175
>Q68VV9 NADH-quinone oxidoreductase subunit J [Rickettsia typhi
(strain ATCC VR-144 / Wilmington)]
Length=205
Score = 82.4 bits (202), Expect = 2e-23
Identities = 46/171 (27%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Query 5 FYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
FYL + IIS++ VV + N V+++L LI + + AG+ +++GA F L I++Y GA+
Sbjct 5 FYLFTTLIIISSLCVVLSKNSVYSVLWLIFTFINAAGLMILLGAEFLAMLLIVIYVGAVA 64
Query 65 VLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLS--GEYTTAGHVL 122
VLF+FV+MML++ + + + S + + +M L +T++ + +
Sbjct 65 VLFLFVIMMLDINFNQAITKLRENLSLSIFITLIMFVDLVITVILSTKNINHSSNISFAI 124
Query 123 GREVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKREPSATEGQE 173
+ KA+G L+T ++L ++A ++L A+++ L ++ + Q+
Sbjct 125 ANNISNTKAIGSVLYTDFMLPFQMAGLILFVAMISCITLTLKKRERVKYQD 175
>P48924 NADH-ubiquinone oxidoreductase chain 6 [Chondrus crispus]
Length=204
Score = 81.6 bits (200), Expect = 4e-23
Identities = 55/169 (33%), Positives = 90/169 (53%), Gaps = 18/169 (11%)
Query 5 FYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
FYL ++ A+IS++ V+ TN VH++L LI+ VAG+ +++G F + IIVY GAI
Sbjct 8 FYLFSIFALISSLMVIGLTNAVHSVLFLILVFCNVAGLLLLLGPEFFSFMLIIVYVGAIA 67
Query 65 VLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAGHVLGR 124
VLF+FVVMMLN+ + S W + +++F++ L+ + E G+
Sbjct 68 VLFLFVVMMLNIKLKSTNIS----FSSLWPI-GILTFVILLSQFFSSFYELDLV-KFQGK 121
Query 125 EVI------------GPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHL 161
E+ K +G+ L+TH+ LL I ++LL A++ L
Sbjct 122 ELFFISWANENSNLTNIKVIGKVLYTHFNLLFLICGLILLVAMIGVIVL 170
>P26523 NAD(P)H-quinone oxidoreductase chain 6 [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=198
Score = 78.6 bits (192), Expect = 5e-22
Identities = 46/161 (29%), Positives = 89/161 (55%), Gaps = 3/161 (2%)
Query 5 FYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
F ++A + I + + VV +N V++ L L+++GI++++ A F A +++VY GA+
Sbjct 12 FLILAFLVIGAALGVVLLSNIVYSAFLLGGVFLSISGIYILLNADFVAAAQVLVYVGAVS 71
Query 65 VLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAGHVLGR 124
VL +F +M++N + +WL + + A+ F L T+V + + G +
Sbjct 72 VLILFAIMLVNKREDFSKIPGRWLRNVSTALVCTGIFALLSTMVLITPWQINETGPFVEN 131
Query 125 EVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKRE 165
++ +G+ F+ YLL E+A++LLL A+V A L +R+
Sbjct 132 TLV---TIGKHFFSDYLLPFELASVLLLMAMVGAIILARRD 169
>O47498 NADH-ubiquinone oxidoreductase chain 6 [Metridium senile]
Length=202
Score = 78.2 bits (191), Expect = 8e-22
Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query 5 FYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
F+ ++ + S I V++ NPVH++ L+V+ ++ A +F+++G F + II+Y GAI
Sbjct 6 FFTLSFGTVASGIMVISALNPVHSVFWLVVAFISSAALFILLGVDFIALMFIIIYVGAIA 65
Query 65 VLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMS----FLLGLTLVWM-LSGEYTTAG 119
+LF+FV+MMLNL T R T VP ++ F + W+ + G Y G
Sbjct 66 ILFLFVIMMLNLTDFTPAFRRGGEADMTNYVPIGLAVGTLFFEAIASSWLIMGGPYVYRG 125
Query 120 HVLGREVIGP---------KAVGQALFTHYLLLVEIAAMLLLAALVAAFHL 161
+ ++ P +A+G+ L+T L + + +LL A++ A L
Sbjct 126 LLGAWDLANPWFLKKYHNIEAIGRILYTDCYYLFILVSFILLVAMLGAIVL 176
>O63849 NADH-ubiquinone oxidoreductase chain 6 [Sarcophyton glaucum]
Length=185
Score = 77.4 bits (189), Expect = 1e-21
Identities = 46/167 (28%), Positives = 89/167 (53%), Gaps = 16/167 (10%)
Query 5 FYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
F + +L + +++ V++ NPV+++ L+++ + A +F+ +G + G + IIVY GAI
Sbjct 5 FMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIA 64
Query 65 VLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAGHVLGR 124
+LF+FV+M++ Q+ +GL+++++ T + +
Sbjct 65 ILFLFVIMLIQQPNKIDSQDHSHFLP------------IGLSVIFLFYSLLTNSPKYISN 112
Query 125 EVIGPK----AVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKREPS 167
VIG + A+G L+T Y LV IA+++LL A++ A L K+ S
Sbjct 113 PVIGSRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNS 159
>Q8PU61 F(420)H(2) dehydrogenase subunit J [Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88)]
Length=176
Score = 76.3 bits (186), Expect = 2e-21
Identities = 51/170 (30%), Positives = 93/170 (55%), Gaps = 21/170 (12%)
Query 5 FYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
F L+ALV + I VV + V A L+LI+ + VAG+++++ A F G ++++VY GAI
Sbjct 16 FGLLALVTVFFAIFVVIAKDVVRAGLALIMCMFGVAGLYILLNAQFLGVIQVLVYIGAIG 75
Query 65 VLFVFVVMML--NLGRHTVEQERKWLTSETWAVPALMSFLLGLTLV-WMLSGEYTTAGHV 121
VL +F VM+ +G V+ R ++FL+ L V +++G + T+ +
Sbjct 76 VLILFAVMLTKREIGGGPVQINRP------------LAFLVCLLFVAVVVTGAFGTSWNT 123
Query 122 LGREVIGP------KAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKRE 165
+ P + +G +FTH++ E+ +++LLA+L+ A ++ K E
Sbjct 124 VSELPENPADPSNIEGIGMLIFTHFVAPFEVLSIVLLASLIGAIYMAKGE 173
>Q56225 NADH-quinone oxidoreductase subunit 10 [Thermus thermophilus
(strain ATCC 27634 / DSM 579 / HB8)]
Length=176
Score = 73.6 bits (179), Expect = 3e-20
Identities = 50/162 (31%), Positives = 88/162 (54%), Gaps = 19/162 (12%)
Query 7 LMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIMVL 66
L + ++S + VVT N +HA L+LI++ L +AG+++ + A F G +++IVYAGAI+VL
Sbjct 7 LALFLLLLSGVLVVTLRNAIHAALALILNFLVLAGVYVALDARFLGFIQVIVYAGAIVVL 66
Query 67 FVFVVMML-----NLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAGHV 121
F+FV+M+L +G + + R ++ LL L + +L+
Sbjct 67 FLFVIMLLFAAQGEIGFDPLVRSRP------------LAALLALGVAGILAAGLWGLDLA 114
Query 122 LGREVIG--PKAVGQALFTHYLLLVEIAAMLLLAALVAAFHL 161
+++ G P+A+G L+ +L ++ LL+AA V A L
Sbjct 115 FTQDLKGGLPQALGPLLYGDWLFVLLAVGFLLMAATVVAVAL 156
>P26850 NADH-ubiquinone oxidoreductase chain 6 [Marchantia polymorpha]
Length=199
Score = 72.8 bits (177), Expect = 8e-20
Identities = 47/183 (26%), Positives = 91/183 (50%), Gaps = 18/183 (10%)
Query 5 FYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
FY+ ++A++S V+ NPVH++L LI+ +G+ +++G F + ++VY GAI
Sbjct 4 FYVFVVLALVSGAMVIRAKNPVHSVLFLILVFCNTSGLLVLLGLDFFAMIFLVVYVGAIA 63
Query 65 VLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEY-------TT 117
VLF+FVVMML++ + + V ++ + L + M+ +Y +
Sbjct 64 VLFLFVVMMLHIRIEEIHEN----VLRYLPVGGIIGLIFLLEIFLMVDNDYIPILPTKLS 119
Query 118 AGHVLGREVIGP-------KAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKREPSATE 170
A ++ G + +G L+T Y L +++++LL AL+ A L + + +
Sbjct 120 ATYLTYTVYAGKIHSWTNLETLGNLLYTTYFFLFLVSSLILLVALIGAIVLTMHKTTKVK 179
Query 171 GQE 173
Q+
Sbjct 180 RQD 182
>Q02500 NADH-ubiquinone oxidoreductase chain 6 [Triticum aestivum]
Length=247
Score = 61.6 bits (148), Expect = 2e-15
Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query 12 AIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIMVLFVFVV 71
A++S + VV NPVH++L I+ +G+ +++G F+ + +V+ GAI V F+FVV
Sbjct 28 ALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLILLGLDFSAMISPVVHIGAIAVSFLFVV 87
Query 72 MMLNLGRHTVEQERKWLTSETWAVPAL----MSFLLGLTLVWML-------SGEYTT-AG 119
MM N+ + +E + + + M F+L + +L S YT AG
Sbjct 88 MMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLRYTVYAG 147
Query 120 HVLGREVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKREPSATEGQE 173
V R + +G L+T+Y + +++++LL A++ A L + + Q+
Sbjct 148 KV--RSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQD 199
Lambda K H a alpha
0.332 0.141 0.425 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 407430
Database: 5ec4f9a48dc4ebaf4419358f92688fc7.SwissProt.fasta
Posted date: May 9, 2024 5:12 PM
Number of letters in database: 3,798
Number of sequences in database: 20
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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